Pregenerated sensors for LINC00029 (Homo sapiens)
Ensembl gene IDs: ENSG00000125514Ensembl transcript IDs: ENST00000370341.3, ENST00000414668.5, ENST00000456634.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAGCCTCTCAGCTGCGACTGGGCCCTGGGAGCCATGGAGTCTTCTaGCCGCCTCTCCTGGCCACCAACCAGGAACCCCAGGCCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GASQLRLGPGSHGVF*PPLLATNQEPQAPG Trigger: GCCTGGGGCCTGGGGTTCCTGGTTGGTGGCCAGGAGAGGCGGCCAGAAGACTCCATGGCTCCCAGGGCCCAGTCGCAGCTGAGAGGCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS CCA 90 bp | GTGCTCAGCCCAGGGTCCCGCGGCCAGAGCCAACCATGGCGCGCCTaGTCTCCTCCAGATAAACGCGCGCCCACGTCTCTGCTGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: VLSPGSRGQSQPWRA*SPPDKRAPTSLLGF Trigger: AAAGCCCAGCAGAGACGTGGGCGCGCGTTTATCTGGAGGAGACCAGGCGCGCCATGGTTGGCTCTGGCCGCGGGACCCTGGGCTGAGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 90 bp | GAGGGGGATGAAGGCCACACGGAGCACCGCGGGAGCCCCGCCGTCTaGGCAGGGTTCAGCCTTTCAGCCTCGATGTGGGAAGTCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: EGDEGHTEHRGSPAV*AGFSLSASMWEVSP Trigger: TGGAGAGACTTCCCACATCGAGGCTGAAAGGCTGAACCCTGCGCAGACGGCGGGGCTCCCGCGGTGCTCCGTGTGGCCTTCATCCCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS GCA 90 bp | CTGTGTCAGGCCTGGGTGCCGCCAGGAGGCCTCCTTCCAGCTCTCTaGAAGCTGGCCCCGTGTTCACGGGCATCCAGCGGGATCCACCAT | + |
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Preference number: 5 (lower is better) Translates to: LCQAWVPPGGLLPAL*KLAPCSRASSGIHH Trigger: ATGGTGGATCCCGCTGGATGCCCGTGAACACGGGGCCAGCTTGCAGAGAGCTGGAAGGAGGCCTCCTGGCGGCACCCAGGCCTGACACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370341.3 ENST00000414668.5 |
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| CDS CCA 90 bp | CTATTGGCCATCGTGACGGGGAGCCTCTCAGCTGCGACTGGGCCCTaGGAGCCATGGAGTCTTCTGGCCGCCTCTCCTGGCCACCAACCA | + |
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Preference number: 5 (lower is better) Translates to: LLAIVTGSLSAATGP*EPWSLLAASPGHQP Trigger: TGGTTGGTGGCCAGGAGAGGCGGCCAGAAGACTCCATGGCTCCCAGGGCCCAGTCGCAGCTGAGAGGCTCCCCGTCACGATGGCCAATAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS CCA 90 bp | GAAAGGGCTATTGGCCATCGTGACGGGGAGCCTCTCAGCTGCGACTaGGCCCTGGGAGCCATGGAGTCTTCTGGCCGCCTCTCCTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: ERAIGHRDGEPLSCD*ALGAMESSGRLSWP Trigger: TGGCCAGGAGAGGCGGCCAGAAGACTCCATGGCTCCCAGGGCCCAGTCGCAGCTGAGAGGCTCCCCGTCACGATGGCCAATAGCCCTTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS CCA 90 bp | GGGCAGTCAGCCTCTCTGCTCCAGTGCCGTCAGTTGTCACCTACGTaGGTAAAACGCCAGGAGAGGCTGGATCCCCAGCTCACCGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GQSASLLQCRQLSPT*VKRQERLDPQLTGL Trigger: CAGGCCGGTGAGCTGGGGATCCAGCCTCTCCTGGCGTTTTACCCACGTAGGTGACAACTGACGGCACTGGAGCAGAGAGGCTGACTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS CCA 90 bp | CTGCAAGCTGGCCCCGTGTTCACGGGCATCCAGCGGGATCCACCATaGAAAGACAGCTTTCTCAGAGGCATCTCAGCACGTGGGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LQAGPVFTGIQRDPP*KDSFLRGISARGPS Trigger: GCTGGGCCCACGTGCTGAGATGCCTCTGAGAAAGCTGTCTTTCCATGGTGGATCCCGCTGGATGCCCGTGAACACGGGGCCAGCTTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370341.3 ENST00000414668.5 |
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| CDS TCA 90 bp | GTAGCATCCCATCCTTGTCCTTGGAGAAAGGGCTATTGGCCATCGTaGCGGGGAGCCTCTCAGCTGCGACTGGGCCCTGGGAGCCATGGA | + |
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Preference number: 5 (lower is better) Translates to: VASHPCPWRKGYWPS*RGASQLRLGPGSHG Trigger: TCCATGGCTCCCAGGGCCCAGTCGCAGCTGAGAGGCTCCCCGTCACGATGGCCAATAGCCCTTTCTCCAAGGACAAGGATGGGATGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS TCA 90 bp | GGAAGGATCTGCGGGGCTCTCGAAGCCGTCTGGGAGGAACGTCAATaGCCAGAGGAAGGAACAAGGGTTTCGGGTGGGATTGGCCAATTC | + |
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Preference number: 5 (lower is better) Translates to: GRICGALEAVWEERQ*PEEGTRVSGGIGQF Trigger: GAATTGGCCAATCCCACCCGAAACCCTTGTTCCTTCCTCTGGTCATTGACGTTCCTCCCAGACGGCTTCGAGAGCCCCGCAGATCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 90 bp | GGCGCGCCTGGTCTCCTCCAGATAAACGCGCGCCCACGTCTCTGCTaGGCTTTGGAATTAGCTCAATACTCATTCAGACGCAGAGTGCGT | + |
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Preference number: 5 (lower is better) Translates to: GAPGLLQINARPRLC*ALELAQYSFRRRVR Trigger: ACGCACTCTGCGTCTGAATGAGTATTGAGCTAATTCCAAAGCCCAGCAGAGACGTGGGCGCGCGTTTATCTGGAGGAGACCAGGCGCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS TCA 90 bp | GGTCATCTCAGAACCACGAGCTTGTCTTCCTGGGTTACAGGGTCCTaGGCTTGGCCGAAAAGGGACAAACGAAGGGCCGGGTGTGATGAC | + |
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Preference number: 5 (lower is better) Translates to: GHLRTTSLSSWVTGS*AWPKRDKRRAGCDD Trigger: GTCATCACACCCGGCCCTTCGTTTGTCCCTTTTCGGCCAAGCTCAGGACCCTGTAACCCAGGAAGACAAGCTCGTGGTTCTGAGATGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 90 bp | CATGGCGCGCCTGGTCTCCTCCAGATAAACGCGCGCCCACGTCTCTaGTGGGCTTTGGAATTAGCTCAATACTCATTCAGACGCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: HGAPGLLQINARPRL*WALELAQYSFRRRV Trigger: CACTCTGCGTCTGAATGAGTATTGAGCTAATTCCAAAGCCCAGCAGAGACGTGGGCGCGCGTTTATCTGGAGGAGACCAGGCGCGCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 90 bp | GGATCCACCATGGAAAGACAGCTTTCTCAGAGGCATCTCAGCACGTaGGCCCAGCCAGAACCTCGAGGGCTTCTGTCCCTGGATCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: GSTMERQLSQRHLST*AQPEPRGLLSLDLL Trigger: TAGAAGATCCAGGGACAGAAGCCCTCGAGGTTCTGGCTGGGCCCACGTGCTGAGATGCCTCTGAGAAAGCTGTCTTTCCATGGTGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370341.3 ENST00000414668.5 |
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| CDS TCA 90 bp | AGTGCGTGTGCCCTGCCAGGACAGACGTCATTGCTGTGCGGTGCTTaGGTGCCATCAATAAGCCACAGAAGAGAAATCCGGAAACAAGGG | + |
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Preference number: 5 (lower is better) Translates to: SACALPGQTSLLCGA*VPSISHRREIRKQG Trigger: CCCTTGTTTCCGGATTTCTCTTCTGTGGCTTATTGATGGCACTCAAGCACCGCACAGCAATGACGTCTGTCCTGGCAGGGCACACGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 90 bp | GCAGAGTGCGTGTGCCCTGCCAGGACAGACGTCATTGCTGTGCGGTaGTTGAGTGCCATCAATAAGCCACAGAAGAGAAATCCGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: AECVCPARTDVIAVR*LSAINKPQKRNPET Trigger: TGTTTCCGGATTTCTCTTCTGTGGCTTATTGATGGCACTCAAGCACCGCACAGCAATGACGTCTGTCCTGGCAGGGCACACGCACTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 90 bp | ACCAGAGGAAGGAACAAGGGTTTCGGGTGGGATTGGCCAATTCCCTaGGTCATCTCAGAACCACGAGCTTGTCTTCCTGGGTTACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: TRGRNKGFGWDWPIP*VISEPRACLPGLQG Trigger: ACCCTGTAACCCAGGAAGACAAGCTCGTGGTTCTGAGATGACCCAGGGAATTGGCCAATCCCACCCGAAACCCTTGTTCCTTCCTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 90 bp | CTGGGAGGAACGTCAATGACCAGAGGAAGGAACAAGGGTTTCGGGTaGGATTGGCCAATTCCCTGGGTCATCTCAGAACCACGAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: LGGTSMTRGRNKGFG*DWPIPWVISEPRAC Trigger: ACAAGCTCGTGGTTCTGAGATGACCCAGGGAATTGGCCAATCCCACCCGAAACCCTTGTTCCTTCCTCTGGTCATTGACGTTCCTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 90 bp | GGAACGTCAATGACCAGAGGAAGGAACAAGGGTTTCGGGTGGGATTaGCCAATTCCCTGGGTCATCTCAGAACCACGAGCTTGTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GTSMTRGRNKGFGWD*PIPWVISEPRACLP Trigger: AGGAAGACAAGCTCGTGGTTCTGAGATGACCCAGGGAATTGGCCAATCCCACCCGAAACCCTTGTTCCTTCCTCTGGTCATTGACGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 90 bp | TTGGAATTAGCTCAATACTCATTCAGACGCAGAGTGCGTGTGCCCTaGCAGGACAGACGTCATTGCTGTGCGGTGCTTGAGTGCCATCAA | + |
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Preference number: 5 (lower is better) Translates to: LELAQYSFRRRVRVP*QDRRHCCAVLECHQ Trigger: TTGATGGCACTCAAGCACCGCACAGCAATGACGTCTGTCCTGGCAGGGCACACGCACTCTGCGTCTGAATGAGTATTGAGCTAATTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 90 bp | TTCTTTCTGATGCTATTTGACCAGGACGCTTTCTGCATTTCATCTTaGGGTGTTCACTGTCAGTGCAGAAATATCCTACGCCCCATGATC | + |
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Preference number: 5 (lower is better) Translates to: FFLMLFDQDAFCISS*GVHCQCRNILRPMI Trigger: GATCATGGGGCGTAGGATATTTCTGCACTGACAGTGAACACCCCAAGATGAAATGCAGAAAGCGTCCTGGTCAAATAGCATCAGAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS GCA 90 bp | CTAAGTAGCTTATTCTTTCTGATGCTATTTGACCAGGACGCTTTCTaGATTTCATCTTGGGGTGTTCACTGTCAGTGCAGAAATATCCTA | + |
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Preference number: 5 (lower is better) Translates to: LSSLFFLMLFDQDAF*ISSWGVHCQCRNIL Trigger: TAGGATATTTCTGCACTGACAGTGAACACCCCAAGATGAAATGCAGAAAGCGTCCTGGTCAAATAGCATCAGAAAGAATAAGCTACTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS CCA 72 bp | CCAGGGTCCCGCGGCCAGAGCCAACCATGGCGCGCCTaGTCTCCTCCAGATAAACGCGCGCCCACGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PGSRGQSQPWRA*SPPDKRAPTSL Trigger: CAGAGACGTGGGCGCGCGTTTATCTGGAGGAGACCAGGCGCGCCATGGTTGGCTCTGGCCGCGGGACCCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 72 bp | TGCCTCACTGCCCTGGCTGGAACCCGCTGTGCAGTGTaGGAGGAGCGGGAGGGGAGGGTCCCCTTGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: CLTALAGTRCAV*EEREGRVPLTC Trigger: GCAAGTCAAGGGGACCCTCCCCTCCCGCTCCTCCCACACTGCACAGCGGGTTCCAGCCAGGGCAGTGAGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS CCA 72 bp | CAGCTGCGACTGGGCCCTGGGAGCCATGGAGTCTTCTaGCCGCCTCTCCTGGCCACCAACCAGGAACCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QLRLGPGSHGVF*PPLLATNQEPQ Trigger: CTGGGGTTCCTGGTTGGTGGCCAGGAGAGGCGGCCAGAAGACTCCATGGCTCCCAGGGCCCAGTCGCAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS CCA 72 bp | ATCGTGACGGGGAGCCTCTCAGCTGCGACTGGGCCCTaGGAGCCATGGAGTCTTCTGGCCGCCTCTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: IVTGSLSAATGP*EPWSLLAASPG Trigger: GCCAGGAGAGGCGGCCAGAAGACTCCATGGCTCCCAGGGCCCAGTCGCAGCTGAGAGGCTCCCCGTCACGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS GCA 72 bp | CCACCAACCAGGAACCCCAGGCCCCAGGCCCACGGTTaGATCTGCTGTGCCATCCTGTGTCAGGCCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PPTRNPRPQAHG*ICCAILCQAWV Trigger: CACCCAGGCCTGACACAGGATGGCACAGCAGATGCAACCGTGGGCCTGGGGCCTGGGGTTCCTGGTTGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS CAA 72 bp | GCCACCAACCAGGAACCCCAGGCCCCAGGCCCACGGTaGCATCTGCTGTGCCATCCTGTGTCAGGCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: ATNQEPQAPGPR*HLLCHPVSGLG Trigger: ACCCAGGCCTGACACAGGATGGCACAGCAGATGCAACCGTGGGCCTGGGGCCTGGGGTTCCTGGTTGGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS GCA 72 bp | ATGTTCTTGCCTCACTGCCCTGGCTGGAACCCGCTGTaGAGTGTGGGAGGAGCGGGAGGGGAGGGTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: MFLPHCPGWNPL*SVGGAGGEGPL Trigger: AAGGGGACCCTCCCCTCCCGCTCCTCCCACACTGCACAGCGGGTTCCAGCCAGGGCAGTGAGGCAAGAACAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS GCA 72 bp | TACCCTCTTTTGGTGACTTGGGGTGGCCTGGGTCGGTaGTCAGCCCAGGGTCCCGCGGCCAGAGCCAACCAT | + |
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Preference number: 6 (lower is better) Translates to: YPLLVTWGGLGR*SAQGPAARANH Trigger: ATGGTTGGCTCTGGCCGCGGGACCCTGGGCTGAGCACCGACCCAGGCCACCCCAAGTCACCAAAAGAGGGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370341.3 ENST00000414668.5 |
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| CDS CAA 90 bp | CCTGGTCTCCTCGGGCAGTCAGCCTCTCTGCTCCAGTGCCGTCAGTaGTCACCTACGTGGGTAAAACGCCAGGAGAGGCTGGATCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGLLGQSASLLQCRQ*SPTWVKRQERLDPQ Trigger: CTGGGGATCCAGCCTCTCCTGGCGTTTTACCCACGTAGGTGACAACTGACGGCACTGGAGCAGAGAGGCTGACTGCCCGAGGAGACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS CAA 90 bp | GGAGCGGCATGTAGCATCCCATCCTTGTCCTTGGAGAAAGGGCTATaGGCCATCGTGACGGGGAGCCTCTCAGCTGCGACTGGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GAACSIPSLSLEKGL*AIVTGSLSAATGPW Trigger: CCAGGGCCCAGTCGCAGCTGAGAGGCTCCCCGTCACGATGGCCAATAGCCCTTTCTCCAAGGACAAGGATGGGATGCTACATGCCGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS TCA 72 bp | CATCCTTGTCCTTGGAGAAAGGGCTATTGGCCATCGTaGCGGGGAGCCTCTCAGCTGCGACTGGGCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: HPCPWRKGYWPS*RGASQLRLGPG Trigger: CCCAGGGCCCAGTCGCAGCTGAGAGGCTCCCCGTCACGATGGCCAATAGCCCTTTCTCCAAGGACAAGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS TCA 72 bp | CATAGGTTTGACAGCCCTGTGTCCTTCCAAATCAAGTaGGTGGGTCTGGGTCCCCGGCCCCCTCCAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HRFDSPVSFQIK*VGLGPRPPPAW Trigger: CCAGGCTGGAGGGGGCCGGGGACCCAGACCCACTCACTTGATTTGGAAGGACACAGGGCTGTCAAACCTATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 72 bp | CCTGGTCTCCTCGGGCAGTCAGCCTCTCTGCTCCAGTaGCGTCAGTTGTCACCTACGTGGGTAAAACGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGLLGQSASLLQ*RQLSPTWVKRQ Trigger: CTGGCGTTTTACCCACGTAGGTGACAACTGACGGCACTGGAGCAGAGAGGCTGACTGCCCGAGGAGACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS CCA 72 bp | GCCTCTCTGCTCCAGTGCCGTCAGTTGTCACCTACGTaGGTAAAACGCCAGGAGAGGCTGGATCCCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: ASLLQCRQLSPT*VKRQERLDPQL Trigger: GAGCTGGGGATCCAGCCTCTCCTGGCGTTTTACCCACGTAGGTGACAACTGACGGCACTGGAGCAGAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS CAA 72 bp | CTCGGGCAGTCAGCCTCTCTGCTCCAGTGCCGTCAGTaGTCACCTACGTGGGTAAAACGCCAGGAGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGQSASLLQCRQ*SPTWVKRQERL Trigger: CAGCCTCTCCTGGCGTTTTACCCACGTAGGTGACAACTGACGGCACTGGAGCAGAGAGGCTGACTGCCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS TCA 72 bp | ACAGAAGAGAAATCCGGAAACAAGGGACGCGCAGCGTaGTTCCGTGCCACGGCGTCAGGAGCGGCATGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TEEKSGNKGRAA*FRATASGAACS Trigger: GCTACATGCCGCTCCTGACGCCGTGGCACGGAATCACGCTGCGCGTCCCTTGTTTCCGGATTTCTCTTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 72 bp | CCTGGATCTTCTAGGCTGGGGAGTAGTGGAAGGATCTaGGGGGCTCTCGAAGCCGTCTGGGAGGAACGTCAA | + |
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Preference number: 6 (lower is better) Translates to: PGSSRLGSSGRI*GALEAVWEERQ Trigger: TTGACGTTCCTCCCAGACGGCTTCGAGAGCCCCGCAGATCCTTCCACTACTCCCCAGCCTAGAAGATCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370341.3 ENST00000414668.5 |
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| CDS CCA 72 bp | GGCCCCGTGTTCACGGGCATCCAGCGGGATCCACCATaGAAAGACAGCTTTCTCAGAGGCATCTCAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: GPVFTGIQRDPP*KDSFLRGISAR Trigger: ACGTGCTGAGATGCCTCTGAGAAAGCTGTCTTTCCATGGTGGATCCCGCTGGATGCCCGTGAACACGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370341.3 ENST00000414668.5 |
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| CDS CAA 72 bp | GCGTCAGGAGCGGCATGTAGCATCCCATCCTTGTCCTaGGAGAAAGGGCTATTGGCCATCGTGACGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASGAACSIPSLS*EKGLLAIVTGS Trigger: GCTCCCCGTCACGATGGCCAATAGCCCTTTCTCCAAGGACAAGGATGGGATGCTACATGCCGCTCCTGACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS TCA 72 bp | AGAACCACGAGCTTGTCTTCCTGGGTTACAGGGTCCTaGGCTTGGCCGAAAAGGGACAAACGAAGGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RTTSLSSWVTGS*AWPKRDKRRAG Trigger: CCCGGCCCTTCGTTTGTCCCTTTTCGGCCAAGCTCAGGACCCTGTAACCCAGGAAGACAAGCTCGTGGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS TCA 72 bp | TGCGGGGCTCTCGAAGCCGTCTGGGAGGAACGTCAATaGCCAGAGGAAGGAACAAGGGTTTCGGGTGGGATT | + |
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Preference number: 6 (lower is better) Translates to: CGALEAVWEERQ*PEEGTRVSGGI Trigger: AATCCCACCCGAAACCCTTGTTCCTTCCTCTGGTCATTGACGTTCCTCCCAGACGGCTTCGAGAGCCCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 72 bp | TCTGGATCTTCTAGGCTGGGGAGTAGTGGAAGGATCTaGGGGGCTCTCGAAGCCGTCTGGGAGGAACGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SGSSRLGSSGRI*GALEAVWEERQ Trigger: TTGACGTTCCTCCCAGACGGCTTCGAGAGCCCCGCAGATCCTTCCACTACTCCCCAGCCTAGAAGATCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000456634.1 |
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| CDS CCA 72 bp | ATGGAAAGACAGCTTTCTCAGAGGCATCTCAGCACGTaGGCCCAGCCAGAACCTCGAGGGCTTCTGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: MERQLSQRHLST*AQPEPRGLLSL Trigger: CAGGGACAGAAGCCCTCGAGGTTCTGGCTGGGCCCACGTGCTGAGATGCCTCTGAGAAAGCTGTCTTTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370341.3 ENST00000414668.5 |
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| CDS CAA 90 bp | CCTGGTCTCCTCCAGATAAACGCGCGCCCACGTCTCTGCTGGGCTTaGGAATTAGCTCAATACTCATTCAGACGCAGAGTGCGTGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PGLLQINARPRLCWA*ELAQYSFRRRVRVP Trigger: GGGCACACGCACTCTGCGTCTGAATGAGTATTGAGCTAATTCCAAAGCCCAGCAGAGACGTGGGCGCGCGTTTATCTGGAGGAGACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 72 bp | GCTCAATACTCATTCAGACGCAGAGTGCGTGTGCCCTaGCAGGACAGACGTCATTGCTGTGCGGTGCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: AQYSFRRRVRVP*QDRRHCCAVLE Trigger: CTCAAGCACCGCACAGCAATGACGTCTGTCCTGGCAGGGCACACGCACTCTGCGTCTGAATGAGTATTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CAA 72 bp | TGTAGCATCCCATCCTTGTCCTTGGAGAAAGGGCTATaGGCCATCGTGACGGGGAGCCTCTCAGCTGCGACT | + |
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Preference number: 6 (lower is better) Translates to: CSIPSLSLEKGL*AIVTGSLSAAT Trigger: AGTCGCAGCTGAGAGGCTCCCCGTCACGATGGCCAATAGCCCTTTCTCCAAGGACAAGGATGGGATGCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414668.5 |
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| CDS TCA 72 bp | GCCCTGCCAGGACAGACGTCATTGCTGTGCGGTGCTTaGGTGCCATCAATAAGCCACAGAAGAGAAATCCGG | + |
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Preference number: 6 (lower is better) Translates to: ALPGQTSLLCGA*VPSISHRREIR Trigger: CCGGATTTCTCTTCTGTGGCTTATTGATGGCACTCAAGCACCGCACAGCAATGACGTCTGTCCTGGCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 72 bp | GCCGTCTGCGCAGGGTTCAGCCTTTCAGCCTCGATGTaGGAAGTCTCTCCATCTGTTCAGGTTTTCTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: AVCAGFSLSASM*EVSPSVQVFFG Trigger: CCCAAAGAAAACCTGAACAGATGGAGAGACTTCCCACATCGAGGCTGAAAGGCTGAACCCTGCGCAGACGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS CCA 72 bp | AGGAACAAGGGTTTCGGGTGGGATTGGCCAATTCCCTaGGTCATCTCAGAACCACGAGCTTGTCTTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RNKGFGWDWPIP*VISEPRACLPG Trigger: CCCAGGAAGACAAGCTCGTGGTTCTGAGATGACCCAGGGAATTGGCCAATCCCACCCGAAACCCTTGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CAA 90 bp | GAGTGCGTGTGCCCTGCCAGGACAGACGTCATTGCTGTGCGGTGCTaGAGTGCCATCAATAAGCCACAGAAGAGAAATCCGGAAACAAGG | + |
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Preference number: 6 (lower is better) Translates to: ECVCPARTDVIAVRC*SAINKPQKRNPETR Trigger: CCTTGTTTCCGGATTTCTCTTCTGTGGCTTATTGATGGCACTCAAGCACCGCACAGCAATGACGTCTGTCCTGGCAGGGCACACGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 72 bp | ATGACCAGAGGAAGGAACAAGGGTTTCGGGTGGGATTaGCCAATTCCCTGGGTCATCTCAGAACCACGAGCT | + |
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Preference number: 6 (lower is better) Translates to: MTRGRNKGFGWD*PIPWVISEPRA Trigger: AGCTCGTGGTTCTGAGATGACCCAGGGAATTGGCCAATCCCACCCGAAACCCTTGTTCCTTCCTCTGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CAA 72 bp | AATGACCAGAGGAAGGAACAAGGGTTTCGGGTGGGATaGGCCAATTCCCTGGGTCATCTCAGAACCACGAGC | + |
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Preference number: 6 (lower is better) Translates to: NDQRKEQGFRVG*ANSLGHLRTTS Trigger: GCTCGTGGTTCTGAGATGACCCAGGGAATTGGCCAATCCCACCCGAAACCCTTGTTCCTTCCTCTGGTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CAA 72 bp | TGCCCTGCCAGGACAGACGTCATTGCTGTGCGGTGCTaGAGTGCCATCAATAAGCCACAGAAGAGAAATCCG | + |
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Preference number: 6 (lower is better) Translates to: CPARTDVIAVRC*SAINKPQKRNP Trigger: CGGATTTCTCTTCTGTGGCTTATTGATGGCACTCAAGCACCGCACAGCAATGACGTCTGTCCTGGCAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CAA 90 bp | AGGAACGTCAATGACCAGAGGAAGGAACAAGGGTTTCGGGTGGGATaGGCCAATTCCCTGGGTCATCTCAGAACCACGAGCTTGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RNVNDQRKEQGFRVG*ANSLGHLRTTSLSS Trigger: GGAAGACAAGCTCGTGGTTCTGAGATGACCCAGGGAATTGGCCAATCCCACCCGAAACCCTTGTTCCTTCCTCTGGTCATTGACGTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 72 bp | GTGTGCCCTGCCAGGACAGACGTCATTGCTGTGCGGTaGTTGAGTGCCATCAATAAGCCACAGAAGAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: VCPARTDVIAVR*LSAINKPQKRN Trigger: ATTTCTCTTCTGTGGCTTATTGATGGCACTCAAGCACCGCACAGCAATGACGTCTGTCCTGGCAGGGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS GCA 72 bp | CCTGGTCTCCTCCAGATAAACGCGCGCCCACGTCTCTaGTGGGCTTTGGAATTAGCTCAATACTCATTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PGLLQINARPRL*WALELAQYSFR Trigger: TCTGAATGAGTATTGAGCTAATTCCAAAGCCCAGCAGAGACGTGGGCGCGCGTTTATCTGGAGGAGACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CCA 72 bp | ACGTCAATGACCAGAGGAAGGAACAAGGGTTTCGGGTaGGATTGGCCAATTCCCTGGGTCATCTCAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: TSMTRGRNKGFG*DWPIPWVISEP Trigger: TGGTTCTGAGATGACCCAGGGAATTGGCCAATCCCACCCGAAACCCTTGTTCCTTCCTCTGGTCATTGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CAA 72 bp | CTCCAGATAAACGCGCGCCCACGTCTCTGCTGGGCTTaGGAATTAGCTCAATACTCATTCAGACGCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LQINARPRLCWA*ELAQYSFRRRV Trigger: CACTCTGCGTCTGAATGAGTATTGAGCTAATTCCAAAGCCCAGCAGAGACGTGGGCGCGCGTTTATCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370341.3 ENST00000414668.5 ENST00000456634.1 |
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| CDS CAA 90 bp | TTTCAGCCTCGATGTGGGAAGTCTCTCCATCTGTTCAGGTTTTCTTaGGGTCTTTTTACCAGCCATGTTTCGCAGTTTGCAGCGTACAAG | + |
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Preference number: 6 (lower is better) Translates to: FQPRCGKSLHLFRFS*GLFTSHVSQFAAYK Trigger: CTTGTACGCTGCAAACTGCGAAACATGGCTGGTAAAAAGACCCAAAGAAAACCTGAACAGATGGAGAGACTTCCCACATCGAGGCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS GCA 72 bp | GCTTTCTGCATTTCATCTTGGGGTGTTCACTGTCAGTaGAGAAATATCCTACGCCCCATGATCTTGTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: AFCISSWGVHCQ*RNILRPMILLN Trigger: GTTTAACAAGATCATGGGGCGTAGGATATTTCTGCACTGACAGTGAACACCCCAAGATGAAATGCAGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS GCA 72 bp | TTATTCTTTCTGATGCTATTTGACCAGGACGCTTTCTaGATTTCATCTTGGGGTGTTCACTGTCAGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LFFLMLFDQDAF*ISSWGVHCQCR Trigger: TCTGCACTGACAGTGAACACCCCAAGATGAAATGCAGAAAGCGTCCTGGTCAAATAGCATCAGAAAGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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| CDS GCA 72 bp | TTCTTTGGGTCTTTTTACCAGCCATGTTTCGCAGTTTaGAGCGTACAAGTCTCACACTTCCTTTGCGAAATT | + |
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Preference number: 6 (lower is better) Translates to: FFGSFYQPCFAV*SVQVSHFLCEI Trigger: AATTTCGCAAAGGAAGTGTGAGACTTGTACGCTGCAAACTGCGAAACATGGCTGGTAAAAAGACCCAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370341.3 |
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