Pregenerated sensors for LINC-PINT (Homo sapiens)
Ensembl gene IDs: ENSG00000231721Ensembl transcript IDs: ENST00000416999.1, ENST00000423414.5, ENST00000429901.2, ENST00000431189.1, ENST00000433079.5, ENST00000435523.5, ENST00000443623.5, ENST00000451786.5, ENST00000642156.1, ENST00000642483.1, ENST00000642602.1, ENST00000643135.1, ENST00000643855.1, ENST00000643874.1, ENST00000644188.1, ENST00000644804.1, ENST00000645248.1, ENST00000646429.1, ENST00000646587.1, ENST00000647288.1, ENST00000647388.1
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGAGCGGTGGAGACTCCGGAGACAGGTGCCGCGCTGGTCTGGGCTaGCGGCTAAAAGTTGTCCTCCGCGCGGTGGGCGGTGGGGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: RSGGDSGDRCRAGLG*RLKVVLRAVGGGVP Trigger: GGGGACCCCACCGCCCACCGCGCGGAGGACAACTTTTAGCCGGCAGCCCAGACCAGCGCGGCACCTGTCTCCGGAGTCTCCACCGCTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423414.5 ENST00000431189.1 ENST00000451786.5 ENST00000643135.1 ENST00000647288.1 |
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| CDS CCA 90 bp | ATGAATCGGGAGGAGCGGTGGAGACTCCGGAGACAGGTGCCGCGCTaGTCTGGGCTGCCGGCTAAAAGTTGTCCTCCGCGCGGTGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: MNREERWRLRRQVPR*SGLPAKSCPPRGGR Trigger: CCGCCCACCGCGCGGAGGACAACTTTTAGCCGGCAGCCCAGACCAGCGCGGCACCTGTCTCCGGAGTCTCCACCGCTCCTCCCGATTCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000423414.5 ENST00000431189.1 ENST00000451786.5 ENST00000643135.1 ENST00000647288.1 |
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| CDS CCA 90 bp | GCGCTGCAGGAGCCCCGATCGGGGAGCCACAGCATCCGGGAGCCGTaGTGTCTGTGCGTGCGTGGAGCCTGTGCTCATGACATAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: ALQEPRSGSHSIREP*CLCVRGACAHDIGS Trigger: GCTTCCTATGTCATGAGCACAGGCTCCACGCACGCACAGACACCACGGCTCCCGGATGCTGTGGCTCCCCGATCGGGGCTCCTGCAGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS CCA 90 bp | ATCGGGAAGCCCCGCGGTAGCCCCAGTCGACCTCTGGGTGCCACGTaGCACCTCCACTGTTGTGACTACACACACAAGCCCGGGACACCC | + |
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Preference number: 5 (lower is better) Translates to: IGKPRGSPSRPLGAT*HLHCCDYTHKPGTP Trigger: GGGTGTCCCGGGCTTGTGTGTGTAGTCACAACAGTGGAGGTGCCACGTGGCACCCAGAGGTCGACTGGGGCTACCGCGGGGCTTCCCGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 90 bp | TCACTGGGGTCTCCTCCACACCCTTCTCTCTGGTCCCATCCCTTCTaGTGCCAAGCCCCAGCGTTCCTCCGGCTCGGCCTGGTCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLGSPPHPSLWSHPF*CQAPAFLRLGLVSL Trigger: CAAGCTGACCAGGCCGAGCCGGAGGAACGCTGGGGCTTGGCAGCAGAAGGGATGGGACCAGAGAGAAGGGTGTGGAGGAGACCCCAGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS CCA 90 bp | CCCTCCACCCCTCCCGAGTCCCGGTTGCGGCGCTTCCTGGGCGGATaGCTTGAAATTGCTGCAGCAGCTGCGGTTCTGCTGTGTCATGCA | + |
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Preference number: 5 (lower is better) Translates to: PSTPPESRLRRFLGG*LEIAAAAAVLLCHA Trigger: TGCATGACACAGCAGAACCGCAGCTGCTGCAGCAATTTCAAGCCATCCGCCCAGGAAGCGCCGCAACCGGGACTCGGGAGGGGTGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS GCA 90 bp | GAGCCCCGATCGGGGAGCCACAGCATCCGGGAGCCGTGGTGTCTGTaGGTGCGTGGAGCCTGTGCTCATGACATAGGAAGCCGAACAGAA | + |
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Preference number: 5 (lower is better) Translates to: EPRSGSHSIREPWCL*VRGACAHDIGSRTE Trigger: TTCTGTTCGGCTTCCTATGTCATGAGCACAGGCTCCACGCACGCACAGACACCACGGCTCCCGGATGCTGTGGCTCCCCGATCGGGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS CCA 90 bp | GAAATGTCCTGGCCCTCACTGGGGTCTCCTCCACACCCTTCTCTCTaGTCCCATCCCTTCTGCTGCCAAGCCCCAGCGTTCCTCCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: EMSWPSLGSPPHPSL*SHPFCCQAPAFLRL Trigger: GAGCCGGAGGAACGCTGGGGCTTGGCAGCAGAAGGGATGGGACCAGAGAGAAGGGTGTGGAGGAGACCCCAGTGAGGGCCAGGACATTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS GCA 90 bp | TTCCTCCGGCTCGGCCTGGTCAGCTTGAGCCTCATTTTGTTCGCGTaGCCCTGGGCTGGGAAAGGAGTGTGTGGTGCACAGTGGGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: FLRLGLVSLSLILFA*PWAGKGVCGAQWGQ Trigger: TTGGCCCCACTGTGCACCACACACTCCTTTCCCAGCCCAGGGGCACGCGAACAAAATGAGGCTCAAGCTGACCAGGCCGAGCCGGAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS CCA 90 bp | GAGCGTATTCTTGAGAATTTCCCTGGGATGAATCGGGAGGAGCGGTaGAGACTCCGGAGACAGGTGCCGCGCTGGTCTGGGCTGCCGGCT | + |
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Preference number: 5 (lower is better) Translates to: ERILENFPGMNREER*RLRRQVPRWSGLPA Trigger: AGCCGGCAGCCCAGACCAGCGCGGCACCTGTCTCCGGAGTCTCCACCGCTCCTCCCGATTCATCCCAGGGAAATTCTCAAGAATACGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000423414.5 ENST00000429901.2 ENST00000431189.1 ENST00000451786.5 ENST00000642156.1 ENST00000642483.1 ENST00000643135.1 ENST00000643874.1 ENST00000645248.1 ENST00000647288.1 ENST00000647388.1 |
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| CDS GCA 90 bp | TGTGCCACCTTCTTCTTAACTCACAGGCCCACTGACCCTCACTGCTaGTGTGGGCTGCTCCCACCAGCCCGTGCTGAGCCTCCTACCTCA | + |
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Preference number: 5 (lower is better) Translates to: CATFFLTHRPTDPHC*CGLLPPARAEPPTS Trigger: TGAGGTAGGAGGCTCAGCACGGGCTGGTGGGAGCAGCCCACAGCAGCAGTGAGGGTCAGTGGGCCTGTGAGTTAAGAAGAAGGTGGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000431189.1 ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS TCA 90 bp | GCAGCGGGCTGCGAGCTGGAGCAGACGTTAACACCGAGGGAGGACTaGAGGGAACGTCTTGATTTTTCTCCGAATAGCAATGCCCACCCC | + |
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Preference number: 5 (lower is better) Translates to: AAGCELEQTLTPRED*RERLDFSPNSNAHP Trigger: GGGGTGGGCATTGCTATTCGGAGAAAAATCAAGACGTTCCCTTCAGTCCTCCCTCGGTGTTAACGTCTGCTCCAGCTCGCAGCCCGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433079.5 |
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| CDS TCA 90 bp | CATCCGGGAGCCGTGGTGTCTGTGCGTGCGTGGAGCCTGTGCTCATaGCATAGGAAGCCGAACAGAAGGAGCGTCCTCAAATCCTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: HPGAVVSVRAWSLCS*HRKPNRRSVLKSFP Trigger: AGGAAAGGATTTGAGGACGCTCCTTCTGTTCGGCTTCCTATGTCATGAGCACAGGCTCCACGCACGCACAGACACCACGGCTCCCGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS GCA 90 bp | TCGTGGCTGCAGCAGGAGAGTTGCTTGAACCCAGGATACGGAGGTTaGAGTCAGTTGAGATCACACCACTGCATTCCAGTCTGGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: SWLQQESCLNPGYGG*SQLRSHHCIPVWAT Trigger: TGTTGCCCAGACTGGAATGCAGTGGTGTGATCTCAACTGACTGCAACCTCCGTATCCTGGGTTCAAGCAACTCTCCTGCTGCAGCCACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS GCA 90 bp | GGACACCCACTTGTTAGCTCAGGAACCAGGCGGCCAGCAGATATCTaGTCAGATGAACGTCCAGAGACTCAATCCTCTGGCATTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: GHPLVSSGTRRPADI*SDERPETQSSGILR Trigger: CCTGAGAATGCCAGAGGATTGAGTCTCTGGACGTTCATCTGAGCAGATATCTGCTGGCCGCCTGGTTCCTGAGCTAACAAGTGGGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CCA 90 bp | CTGGCTCGTTCCTTCCACTGGTACTCACAGCTTCCTCATTTTTCGTaGCTGCAGCAGGAGAGTTGCTTGAACCCAGGATACGGAGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: LARSFHWYSQLPHFS*LQQESCLNPGYGGC Trigger: GCAACCTCCGTATCCTGGGTTCAAGCAACTCTCCTGCTGCAGCCACGAAAAATGAGGAAGCTGTGAGTACCAGTGGAAGGAACGAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS CCA 90 bp | CTTCTGAGATGGTTCCAGTCCCTCTTCCTGGCTCGTTCCTTCCACTaGTACTCACAGCTTCCTCATTTTTCGTGGCTGCAGCAGGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: LLRWFQSLFLARSFH*YSQLPHFSWLQQES Trigger: ACTCTCCTGCTGCAGCCACGAAAAATGAGGAAGCTGTGAGTACCAGTGGAAGGAACGAGCCAGGAAGAGGGACTGGAACCATCTCAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS CCA 90 bp | GAAACCCACTGTGCCTGCTTCCAAATGGAAATCAGGGCGGCGAACTaGGGCTGTTTTGCTAGAGGTGCTCCTGGTCATACCATGCAAAAC | + |
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Preference number: 5 (lower is better) Translates to: ETHCACFQMEIRAAN*GCFARGAPGHTMQN Trigger: GTTTTGCATGGTATGACCAGGAGCACCTCTAGCAAAACAGCCCCAGTTCGCCGCCCTGATTTCCATTTGGAAGCAGGCACAGTGGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 90 bp | TGGTACTCACAGCTTCCTCATTTTTCGTGGCTGCAGCAGGAGAGTTaGTTGAACCCAGGATACGGAGGTTGCAGTCAGTTGAGATCACAC | + |
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Preference number: 5 (lower is better) Translates to: WYSQLPHFSWLQQES*LNPGYGGCSQLRSH Trigger: GTGTGATCTCAACTGACTGCAACCTCCGTATCCTGGGTTCAAGCAACTCTCCTGCTGCAGCCACGAAAAATGAGGAAGCTGTGAGTACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS TCA 90 bp | GGCGATTCCTTCCTCAAGGTCCCTGCTTTCACTTTAAAAGCTGTGTaGGTGCTTACATCCAGGTTTGCCGTGGAACTCCAAATGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GDSFLKVPAFTLKAV*VLTSRFAVELQMSV Trigger: CACAGACATTTGGAGTTCCACGGCAAACCTGGATGTAAGCACTCACACAGCTTTTAAAGTGAAAGCAGGGACCTTGAGGAAGGAATCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 90 bp | TTTAAATTGCAGCCTCTTGTCTGTGACACCTTCCCACCTAGTTTCTaGACAATTCCTGCACAAGGACCCTCTGCGTTAACATCGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FKLQPLVCDTFPPSF*TIPAQGPSALTSVL Trigger: CAGGACCGATGTTAACGCAGAGGGTCCTTGTGCAGGAATTGTGCAGAAACTAGGTGGGAAGGTGTCACAGACAAGAGGCTGCAATTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS TCA 90 bp | AGGCTAGGACTCTTTTTCACTATGTGCTGCCTTACAACTGTCACCTaGGGTTCGAGTAACTCTCCAACTAGCCAAGCCCTGGCTACTTAT | + |
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Preference number: 5 (lower is better) Translates to: RLGLFFTMCCLTTVT*GSSNSPTSQALATY Trigger: ATAAGTAGCCAGGGCTTGGCTAGTTGGAGAGTTACTCGAACCTCAGGTGACAGTTGTAAGGCAGCACATAGTGAAAAAGAGTCCTAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS TCA 90 bp | GAACTTACTTTGTTTCCCAGCACAGTAAGCAGGTCGGCAATGAGATaGCGGCGATTCCTTCCTCAAGGTCCCTGCTTTCACTTTAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: ELTLFPSTVSRSAMR*RRFLPQGPCFHFKS Trigger: GCTTTTAAAGTGAAAGCAGGGACCTTGAGGAAGGAATCGCCGTCATCTCATTGCCGACCTGCTTACTGTGCTGGGAAACAAAGTAAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CCA 90 bp | CTTCTGAGATGGTTCCAGTCCCTCTTCCTGGCTCGTTCCTTCCACTaGTACTCACAGCTTCCTCATTTTTCCTGTTCAGTGGTTTATTCT | + |
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Preference number: 5 (lower is better) Translates to: LLRWFQSLFLARSFH*YSQLPHFSCSVVYS Trigger: AGAATAAACCACTGAACAGGAAAAATGAGGAAGCTGTGAGTACCAGTGGAAGGAACGAGCCAGGAAGAGGGACTGGAACCATCTCAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000423414.5 ENST00000433079.5 ENST00000435523.5 ENST00000443623.5 ENST00000451786.5 ENST00000642602.1 ENST00000643855.1 ENST00000644804.1 ENST00000645248.1 ENST00000646587.1 ENST00000647388.1 |
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| CDS CCA 90 bp | CTTCTGAGATGGTTCCAGTCCCTCTTCCTGGCTCGTTCCTTCCACTaGTACTCACAGCTTCCTCATTTTTCCCTTATGTTTTTCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: LLRWFQSLFLARSFH*YSQLPHFSLMFFSQ Trigger: TTGGCTGAAAAACATAAGGGAAAAATGAGGAAGCTGTGAGTACCAGTGGAAGGAACGAGCCAGGAAGAGGGACTGGAACCATCTCAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000643135.1 ENST00000643874.1 |
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| CDS TCA 90 bp | CCTCAAATCCTTTCCTACAGTCACCAAACCCACGCTCTGTTAAAATaGCATTTCGTGGCTCCTACTTTGTTTCCCCGGAGAGCAATGAGT | + |
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Preference number: 5 (lower is better) Translates to: PQILSYSHQTHALLK*HFVAPTLFPRRAMS Trigger: ACTCATTGCTCTCCGGGGAAACAAAGTAGGAGCCACGAAATGTCATTTTAACAGAGCGTGGGTTTGGTGACTGTAGGAAAGGATTTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS GCA 90 bp | CCCTGCTTTCACTTTAAAAGCTGTGTGAGTGCTTACATCCAGGTTTaGCGTGGAACTCCAAATGTCTGTGCTTCTAAAGATGCCCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: PCFHFKSCVSAYIQV*RGTPNVCASKDAPS Trigger: ACTTGGGGCATCTTTAGAAGCACAGACATTTGGAGTTCCACGGCAAACCTGGATGTAAGCACTCACACAGCTTTTAAAGTGAAAGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 90 bp | TTCACAACATTCCATACTAGACATAGAAGTAACACCCCTGGTTTCTaGTTTCCAGTTCCACACTCCAGTCGTGCTCCCACCTTTTACCTT | + |
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Preference number: 5 (lower is better) Translates to: FTTFHTRHRSNTPGF*FPVPHSSRAPTFYL Trigger: AAGGTAAAAGGTGGGAGCACGACTGGAGTGTGGAACTGGAAAGCAGAAACCAGGGGTGTTACTTCTATGTCTAGTATGGAATGTTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 90 bp | AAAGGGGTCCTGATCCAGACCCCAAGGGAGGACTCTTGTATCTCATaGAAGAAAGAATTCAGCTGTTACAGGGTGTTATCAATTATCTCT | + |
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Preference number: 5 (lower is better) Translates to: KGVLIQTPREDSCIS*KKEFSCYRVLSIIS Trigger: AGAGATAATTGATAACACCCTGTAACAGCTGAATTCTTTCTTGCATGAGATACAAGAGTCCTCCCTTGGGGTCTGGATCAGGACCCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416999.1 |
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| CDS GCA 90 bp | CAAGCTTTCTGGAATTACGTTCCTCCAGTAACTGTTGATGATGCTTaGAGGAGGCAAAATGCAATGCAGTTTTTCTCTTCCGCAGCTATA | + |
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Preference number: 5 (lower is better) Translates to: QAFWNYVPPVTVDDA*RRQNAMQFFSSAAI Trigger: TATAGCTGCGGAAGAGAAAAACTGCATTGCATTTTGCCTCCTGCAAGCATCATCAACAGTTACTGGAGGAACGTAATTCCAGAAAGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS CCA 90 bp | GACAGTCCTGCTCACTTGGCACTATCTTTAACAAGACTGTTTAGATaGCAATGCTCTGCTCATTCGCCCTTCTTTCAAACTGTTCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: DSPAHLALSLTRLFR*QCSAHSPFFQTVLN Trigger: ATTAAGAACAGTTTGAAAGAAGGGCGAATGAGCAGAGCATTGCCATCTAAACAGTCTTGTTAAAGATAGTGCCAAGTGAGCAGGACTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS TCA 90 bp | ATTAGAGAAATTAACAGACTTTGCTATGTCACAGAGATAGGTGAGTaGACTGAAACCAGACCTAAGGTTTTGGACTTTCCCAGGCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: IREINRLCYVTEIGE*TETRPKVLDFPRLG Trigger: TCCTAGCCTGGGAAAGTCCAAAACCTTAGGTCTGGTTTCAGTTCACTCACCTATCTCTGTGACATAGCAAAGTCTGTTAATTTCTCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS CCA 90 bp | ATTTACAGAGGTGGAAACGAAGGCAAGCAAATGCAGTCATTTTGTTaGAGGACTATTCTACATTTCCAAAGCAATGAAGACATGACCCCA | + |
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Preference number: 5 (lower is better) Translates to: IYRGGNEGKQMQSFC*RTILHFQSNEDMTP Trigger: TGGGGTCATGTCTTCATTGCTTTGGAAATGTAGAATAGTCCTCCAACAAAATGACTGCATTTGCTTGCCTTCGTTTCCACCTCTGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 90 bp | AATATACTCAGCAGATTGATTCATGGCAAACCTAGCTCAGCCACTTaGCTAGACTTCAGTTTATTTAGGATAAACCTCAGAGTATGTACT | + |
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Preference number: 5 (lower is better) Translates to: NILSRLIHGKPSSAT*LDFSLFRINLRVCT Trigger: AGTACATACTCTGAGGTTTATCCTAAATAAACTGAAGTCTAGGCAAGTGGCTGAGCTAGGTTTGCCATGAATCAATCTGCTGAGTATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS GCA 90 bp | CAGATATTTCTTCTATTTACAGAGGTGGAAACGAAGGCAAGCAAATaGAGTCATTTTGTTGGAGGACTATTCTACATTTCCAAAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: QIFLLFTEVETKASK*SHFVGGLFYISKAM Trigger: CATTGCTTTGGAAATGTAGAATAGTCCTCCAACAAAATGACTGCATTTGCTTGCCTTCGTTTCCACCTCTGTAAATAGAAGAAATATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CCA 72 bp | AGCTTTCAGCTCCGGCGCTTCCGCAGACCCCTCACGTaGCTGCCGCCTCCCTGCCATGGCACTCCCCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: SFQLRRFRRPLT*LPPPCHGTPRR Trigger: TCGCCGGGGAGTGCCATGGCAGGGAGGCGGCAGCCACGTGAGGGGTCTGCGGAAGCGCCGGAGCTGAAAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643855.1 ENST00000646429.1 |
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| CDS GCA 72 bp | GGAGACTCCGGAGACAGGTGCCGCGCTGGTCTGGGCTaGCGGCTAAAAGTTGTCCTCCGCGCGGTGGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GDSGDRCRAGLG*RLKVVLRAVGG Trigger: ACCGCCCACCGCGCGGAGGACAACTTTTAGCCGGCAGCCCAGACCAGCGCGGCACCTGTCTCCGGAGTCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000423414.5 ENST00000431189.1 ENST00000451786.5 ENST00000643135.1 ENST00000647288.1 |
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| CDS CCA 72 bp | GAGGAGCGGTGGAGACTCCGGAGACAGGTGCCGCGCTaGTCTGGGCTGCCGGCTAAAAGTTGTCCTCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: EERWRLRRQVPR*SGLPAKSCPPR Trigger: GCGCGGAGGACAACTTTTAGCCGGCAGCCCAGACCAGCGCGGCACCTGTCTCCGGAGTCTCCACCGCTCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000423414.5 ENST00000429901.2 ENST00000431189.1 ENST00000451786.5 ENST00000642156.1 ENST00000642483.1 ENST00000643135.1 ENST00000643874.1 ENST00000645248.1 ENST00000647288.1 ENST00000647388.1 |
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| CDS CCA 72 bp | CCTCCACCCCTCCCGAGTCCCGGTTGCGGCGCTTCCTaGGCGGATGGCTTGAAATTGCTGCAGCAGCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: PPPLPSPGCGAS*ADGLKLLQQLR Trigger: CCGCAGCTGCTGCAGCAATTTCAAGCCATCCGCCCAGGAAGCGCCGCAACCGGGACTCGGGAGGGGTGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS CCA 72 bp | GAGCCCCGATCGGGGAGCCACAGCATCCGGGAGCCGTaGTGTCTGTGCGTGCGTGGAGCCTGTGCTCATGAC | + |
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Preference number: 6 (lower is better) Translates to: EPRSGSHSIREP*CLCVRGACAHD Trigger: GTCATGAGCACAGGCTCCACGCACGCACAGACACCACGGCTCCCGGATGCTGTGGCTCCCCGATCGGGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS GCA 72 bp | CCCGTCTCTAGAGTGCACCAAGGCATCCTGCGTCCCTaGCGGAGAAAAGAGGGACGGGGCCAGAGGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: PVSRVHQGILRP*RRKEGRGQRPE Trigger: CTCGGGCCTCTGGCCCCGTCCCTCTTTTCTCCGGCAGGGACGCAGGATGCCTTGGTGCACTCTAGAGACGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000433079.5 ENST00000644804.1 |
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| CDS GCA 72 bp | CAGGCGCGCTGCACCCTCCGGTCCCCGTCTCTAGAGTaGACCAAGGCATCCTGCGTCCCTGCCGGAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: QARCTLRSPSLE*TKASCVPAGEK Trigger: CTTTTCTCCGGCAGGGACGCAGGATGCCTTGGTGCACTCTAGAGACGGGGACCGGAGGGTGCAGCGCGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000433079.5 ENST00000644804.1 |
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| CDS CAA 72 bp | TCCTCCCCAGGGCTGAACGCACGCTGCTTTAGCTCCTaGCCTCGTTCCTTCCTCCCGGGCGCGACGCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSPGLNARCFSS*PRSFLPGATRG Trigger: ACCTCGCGTCGCGCCCGGGAGGAAGGAACGAGGCAAGGAGCTAAAGCAGCGTGCGTTCAGCCCTGGGGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423414.5 |
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| CDS GCA 72 bp | CTCACAGGCCCACTGACCCTCACTGCTGCTGTGGGCTaGTCCCACCAGCCCGTGCTGAGCCTCCTACCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LTGPLTLTAAVG*SHQPVLSLLPH Trigger: ATGAGGTAGGAGGCTCAGCACGGGCTGGTGGGAGCAGCCCACAGCAGCAGTGAGGGTCAGTGGGCCTGTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000431189.1 ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS GCA 72 bp | TCTCCTCCACACCCTTCTCTCTGGTCCCATCCCTTCTaGTGCCAAGCCCCAGCGTTCCTCCGGCTCGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPPHPSLWSHPF*CQAPAFLRLGL Trigger: CAGGCCGAGCCGGAGGAACGCTGGGGCTTGGCAGCAGAAGGGATGGGACCAGAGAGAAGGGTGTGGAGGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS CCA 72 bp | CCTCCCGAGTCCCGGTTGCGGCGCTTCCTGGGCGGATaGCTTGAAATTGCTGCAGCAGCTGCGGTTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPESRLRRFLGG*LEIAAAAAVLL Trigger: CAGCAGAACCGCAGCTGCTGCAGCAATTTCAAGCCATCCGCCCAGGAAGCGCCGCAACCGGGACTCGGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS CCA 72 bp | CCCCGCGGTAGCCCCAGTCGACCTCTGGGTGCCACGTaGCACCTCCACTGTTGTGACTACACACACAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PRGSPSRPLGAT*HLHCCDYTHKP Trigger: GGGCTTGTGTGTGTAGTCACAACAGTGGAGGTGCCACGTGGCACCCAGAGGTCGACTGGGGCTACCGCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CCA 72 bp | GGATCGGGAAGCCCCGCGGTAGCCCCAGTCGACCTCTaGGTGCCACGTGGCACCTCCACTGTTGTGACTACA | + |
|
Preference number: 6 (lower is better) Translates to: GSGSPAVAPVDL*VPRGTSTVVTT Trigger: TGTAGTCACAACAGTGGAGGTGCCACGTGGCACCCAGAGGTCGACTGGGGCTACCGCGGGGCTTCCCGATCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CAA 72 bp | AATGCCCCAGGGCTGAACGCACGCTGCTTTAGCTCCTaGCCTCGTTCCTTCCTCCCGGGCGCGACGCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: NAPGLNARCFSS*PRSFLPGATRG Trigger: ACCTCGCGTCGCGCCCGGGAGGAAGGAACGAGGCAAGGAGCTAAAGCAGCGTGCGTTCAGCCCTGGGGCATT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000429901.2 ENST00000431189.1 ENST00000451786.5 ENST00000642156.1 ENST00000642483.1 ENST00000643874.1 ENST00000644188.1 ENST00000645248.1 ENST00000647288.1 ENST00000647388.1 |
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| CDS CAA 72 bp | TTCTCCCCAGGGCTGAACGCACGCTGCTTTAGCTCCTaGCCTCGTTCCTTCCTCCCGGGCGCGACGCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FSPGLNARCFSS*PRSFLPGATRG Trigger: ACCTCGCGTCGCGCCCGGGAGGAAGGAACGAGGCAAGGAGCTAAAGCAGCGTGCGTTCAGCCCTGGGGAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643135.1 |
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| CDS CAA 90 bp | GCCCCAGCGTTCCTCCGGCTCGGCCTGGTCAGCTTGAGCCTCATTTaGTTCGCGTGCCCCTGGGCTGGGAAAGGAGTGTGTGGTGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: APAFLRLGLVSLSLI*FACPWAGKGVCGAQ Trigger: CTGTGCACCACACACTCCTTTCCCAGCCCAGGGGCACGCGAACAAAATGAGGCTCAAGCTGACCAGGCCGAGCCGGAGGAACGCTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451786.5 |
||
| CDS TCA 72 bp | TCACTGCTGCTGTGGGCTGCTCCCACCAGCCCGTGCTaGGCCTCCTACCTCATCTGCGAGGAGACAGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SLLLWAAPTSPC*ASYLICEETGQ Trigger: TTGCCCTGTCTCCTCGCAGATGAGGTAGGAGGCTCAGCACGGGCTGGTGGGAGCAGCCCACAGCAGCAGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000431189.1 ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS GCA 72 bp | TCGGGGAGCCACAGCATCCGGGAGCCGTGGTGTCTGTaGGTGCGTGGAGCCTGTGCTCATGACATAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSHSIREPWCL*VRGACAHDIGS Trigger: GCTTCCTATGTCATGAGCACAGGCTCCACGCACGCACAGACACCACGGCTCCCGGATGCTGTGGCTCCCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS TCA 72 bp | CGAGTCCCGGTTGCGGCGCTTCCTGGGCGGATGGCTTaGAATTGCTGCAGCAGCTGCGGTTCTGCTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RVPVAALPGRMA*NCCSSCGSAVS Trigger: TGACACAGCAGAACCGCAGCTGCTGCAGCAATTTCAAGCCATCCGCCCAGGAAGCGCCGCAACCGGGACTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451786.5 |
||
| CDS CCA 72 bp | CTTGAGAATTTCCCTGGGATGAATCGGGAGGAGCGGTaGAGACTCCGGAGACAGGTGCCGCGCTGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LENFPGMNREER*RLRRQVPRWSG Trigger: CCCAGACCAGCGCGGCACCTGTCTCCGGAGTCTCCACCGCTCCTCCCGATTCATCCCAGGGAAATTCTCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000423414.5 ENST00000429901.2 ENST00000431189.1 ENST00000451786.5 ENST00000642156.1 ENST00000642483.1 ENST00000643135.1 ENST00000643874.1 ENST00000645248.1 ENST00000647288.1 ENST00000647388.1 |
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| CDS TCA 72 bp | GCTCTGTGCCACCTTCTTCTTAACTCACAGGCCCACTaGCCCTCACTGCTGCTGTGGGCTGCTCCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALCHLLLNSQAH*PSLLLWAAPTS Trigger: GCTGGTGGGAGCAGCCCACAGCAGCAGTGAGGGTCAGTGGGCCTGTGAGTTAAGAAGAAGGTGGCACAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000431189.1 ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS GCA 72 bp | TTCTTCTTAACTCACAGGCCCACTGACCCTCACTGCTaGTGTGGGCTGCTCCCACCAGCCCGTGCTGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: FFLTHRPTDPHC*CGLLPPARAEP Trigger: AGGCTCAGCACGGGCTGGTGGGAGCAGCCCACAGCAGCAGTGAGGGTCAGTGGGCCTGTGAGTTAAGAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000431189.1 ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS GCA 72 bp | CTCGGCCTGGTCAGCTTGAGCCTCATTTTGTTCGCGTaGCCCTGGGCTGGGAAAGGAGTGTGTGGTGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LGLVSLSLILFA*PWAGKGVCGAQ Trigger: CTGTGCACCACACACTCCTTTCCCAGCCCAGGGGCACGCGAACAAAATGAGGCTCAAGCTGACCAGGCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451786.5 |
||
| CDS CAA 72 bp | TTCCTCCGGCTCGGCCTGGTCAGCTTGAGCCTCATTTaGTTCGCGTGCCCCTGGGCTGGGAAAGGAGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLRLGLVSLSLI*FACPWAGKGVC Trigger: ACACACTCCTTTCCCAGCCCAGGGGCACGCGAACAAAATGAGGCTCAAGCTGACCAGGCCGAGCCGGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS TCA 72 bp | GCCGTGGTGTCTGTGCGTGCGTGGAGCCTGTGCTCATaGCATAGGAAGCCGAACAGAAGGAGCGTCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AVVSVRAWSLCS*HRKPNRRSVLK Trigger: TTTGAGGACGCTCCTTCTGTTCGGCTTCCTATGTCATGAGCACAGGCTCCACGCACGCACAGACACCACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS TCA 72 bp | GTTCCCAGTTCATGTCAGACACTGAAGACACACTTGTaGGGATCGGGAAGCCCCGCGGTAGCCCCAGTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: VPSSCQTLKTHL*GSGSPAVAPVD Trigger: GTCGACTGGGGCTACCGCGGGGCTTCCCGATCCTCACAAGTGTGTCTTCAGTGTCTGACATGAACTGGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 72 bp | TTTCTTCCATTTTCCTCCCCAGGGCTGAACGCACGCTaGTTTAGCTCCTTGCCTCGTTCCTTCCTCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FLPFSSPGLNAR*FSSLPRSFLPG Trigger: GCCCGGGAGGAAGGAACGAGGCAAGGAGCTAAAGCAGCGTGCGTTCAGCCCTGGGGAGGAAAATGGAAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423414.5 |
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| CDS GCA 72 bp | TGCGTTAACATCGGTCCTGGGGAAACCCACTGTGCCTaGTTCCAAATGGAAATCAGGGCGGCGAACTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CVNIGPGETHCA*FQMEIRAANWG Trigger: GCCCCAGTTCGCCGCCCTGATTTCCATTTGGAAGCAGGCACAGTGGGTTTCCCCAGGACCGATGTTAACGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CCA 72 bp | ATGACCTCTCTTTACCTGAAATGTCCTGGCCCTCACTaGGGTCTCCTCCACACCCTTCTCTCTGGTCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: MTSLYLKCPGPH*GLLHTLLSGPI Trigger: GATGGGACCAGAGAGAAGGGTGTGGAGGAGACCCCAGTGAGGGCCAGGACATTTCAGGTAAAGAGAGGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS CCA 72 bp | TGTGCCTGCTTCCAAATGGAAATCAGGGCGGCGAACTaGGGCTGTTTTGCTAGAGGTGCTCCTGGTCATACC | + |
|
Preference number: 6 (lower is better) Translates to: CACFQMEIRAAN*GCFARGAPGHT Trigger: GGTATGACCAGGAGCACCTCTAGCAAAACAGCCCCAGTTCGCCGCCCTGATTTCCATTTGGAAGCAGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CAA 72 bp | GGGGTTGCTTCCTTCCACCCTAGACCCCCTACTGCCTaGAATGAAAGAAGACAGATGGCAGCCACCTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GVASFHPRPPTA*NERRQMAATFP Trigger: GGGAAAGGTGGCTGCCATCTGTCTTCTTTCATTCAAGGCAGTAGGGGGTCTAGGGTGGAAGGAAGCAACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CAA 90 bp | GTGCCTGCTTCCAAATGGAAATCAGGGCGGCGAACTGGGGCTGTTTaGCTAGAGGTGCTCCTGGTCATACCATGCAAAACGCCTTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPASKWKSGRRTGAV*LEVLLVIPCKTPCL Trigger: CAGACAAGGCGTTTTGCATGGTATGACCAGGAGCACCTCTAGCAAAACAGCCCCAGTTCGCCGCCCTGATTTCCATTTGGAAGCAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS TCA 72 bp | CTCAGGAACCAGGCGGCCAGCAGATATCTGCTCAGATaGACGTCCAGAGACTCAATCCTCTGGCATTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRNQAASRYLLR*TSRDSILWHSQ Trigger: CTGAGAATGCCAGAGGATTGAGTCTCTGGACGTTCATCTGAGCAGATATCTGCTGGCCGCCTGGTTCCTGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 72 bp | CTTGTTAGCTCAGGAACCAGGCGGCCAGCAGATATCTaGTCAGATGAACGTCCAGAGACTCAATCCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVSSGTRRPADI*SDERPETQSSG Trigger: GCCAGAGGATTGAGTCTCTGGACGTTCATCTGAGCAGATATCTGCTGGCCGCCTGGTTCCTGAGCTAACAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CCA 72 bp | TGGTTCCAGTCCCTCTTCCTGGCTCGTTCCTTCCACTaGTACTCACAGCTTCCTCATTTTTCGTGGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WFQSLFLARSFH*YSQLPHFSWLQ Trigger: CTGCAGCCACGAAAAATGAGGAAGCTGTGAGTACCAGTGGAAGGAACGAGCCAGGAAGAGGGACTGGAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS TCA 72 bp | TTGTTTCCCAGCACAGTAAGCAGGTCGGCAATGAGATaGCGGCGATTCCTTCCTCAAGGTCCCTGCTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LFPSTVSRSAMR*RRFLPQGPCFH Trigger: GTGAAAGCAGGGACCTTGAGGAAGGAATCGCCGTCATCTCATTGCCGACCTGCTTACTGTGCTGGGAAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 72 bp | CAGCAGGAGAGTTGCTTGAACCCAGGATACGGAGGTTaGAGTCAGTTGAGATCACACCACTGCATTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QQESCLNPGYGG*SQLRSHHCIPV Trigger: GACTGGAATGCAGTGGTGTGATCTCAACTGACTGCAACCTCCGTATCCTGGGTTCAAGCAACTCTCCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS GCA 72 bp | CAGCTTCCTCATTTTTCGTGGCTGCAGCAGGAGAGTTaGTTGAACCCAGGATACGGAGGTTGCAGTCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QLPHFSWLQQES*LNPGYGGCSQL Trigger: CAACTGACTGCAACCTCCGTATCCTGGGTTCAAGCAACTCTCCTGCTGCAGCCACGAAAAATGAGGAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS CCA 72 bp | CCCACCCCGCCGCCATGCTTCTTTTATCCTTGCAGGTaGGTGTGTCTTTATCTTCAGGGTGCCTTCATTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTPPPCFFYPCR*VCLYLQGAFIR Trigger: TCTAATGAAGGCACCCTGAAGATAAAGACACACCCACCTGCAAGGATAAAAGAAGCATGGCGGCGGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416999.1 |
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| CDS CAA 72 bp | GCAGCAGGAGAGTTGCTTGAACCCAGGATACGGAGGTaGCAGTCAGTTGAGATCACACCACTGCATTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AAGELLEPRIRR*QSVEITPLHSS Trigger: ACTGGAATGCAGTGGTGTGATCTCAACTGACTGCAACCTCCGTATCCTGGGTTCAAGCAACTCTCCTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS CAA 72 bp | TCCAAATGGAAATCAGGGCGGCGAACTGGGGCTGTTTaGCTAGAGGTGCTCCTGGTCATACCATGCAAAACG | + |
|
Preference number: 6 (lower is better) Translates to: SKWKSGRRTGAV*LEVLLVIPCKT Trigger: CGTTTTGCATGGTATGACCAGGAGCACCTCTAGCAAAACAGCCCCAGTTCGCCGCCCTGATTTCCATTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CAA 90 bp | TACTCACAGCTTCCTCATTTTTCGTGGCTGCAGCAGGAGAGTTGCTaGAACCCAGGATACGGAGGTTGCAGTCAGTTGAGATCACACCAC | + |
|
Preference number: 6 (lower is better) Translates to: YSQLPHFSWLQQESC*NPGYGGCSQLRSHH Trigger: GTGGTGTGATCTCAACTGACTGCAACCTCCGTATCCTGGGTTCAAGCAACTCTCCTGCTGCAGCCACGAAAAATGAGGAAGCTGTGAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS CAA 90 bp | CTGGTACTCACAGCTTCCTCATTTTTCGTGGCTGCAGCAGGAGAGTaGCTTGAACCCAGGATACGGAGGTTGCAGTCAGTTGAGATCACA | + |
|
Preference number: 6 (lower is better) Translates to: LVLTASSFFVAAAGE*LEPRIRRLQSVEIT Trigger: TGTGATCTCAACTGACTGCAACCTCCGTATCCTGGGTTCAAGCAACTCTCCTGCTGCAGCCACGAAAAATGAGGAAGCTGTGAGTACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS CCA 72 bp | TGGTTCCAGTCCCTCTTCCTGGCTCGTTCCTTCCACTaGTACTCACAGCTTCCTCATTTTTCCTGTTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: WFQSLFLARSFH*YSQLPHFSCSV Trigger: CACTGAACAGGAAAAATGAGGAAGCTGTGAGTACCAGTGGAAGGAACGAGCCAGGAAGAGGGACTGGAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000423414.5 ENST00000433079.5 ENST00000435523.5 ENST00000443623.5 ENST00000451786.5 ENST00000642602.1 ENST00000643855.1 ENST00000644804.1 ENST00000645248.1 ENST00000646587.1 ENST00000647388.1 |
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| CDS CCA 72 bp | TCCTTCCACTGGTACTCACAGCTTCCTCATTTTTCGTaGCTGCAGCAGGAGAGTTGCTTGAACCCAGGATAC | + |
|
Preference number: 6 (lower is better) Translates to: SFHWYSQLPHFS*LQQESCLNPGY Trigger: GTATCCTGGGTTCAAGCAACTCTCCTGCTGCAGCCACGAAAAATGAGGAAGCTGTGAGTACCAGTGGAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS CAA 72 bp | AGTTGCTTGAACCCAGGATACGGAGGTTGCAGTCAGTaGAGATCACACCACTGCATTCCAGTCTGGGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: SCLNPGYGGCSQ*RSHHCIPVWAT Trigger: TGTTGCCCAGACTGGAATGCAGTGGTGTGATCTCAACTGACTGCAACCTCCGTATCCTGGGTTCAAGCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000642156.1 ENST00000644188.1 ENST00000646429.1 ENST00000647288.1 |
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| CDS TCA 72 bp | TGCGAGCTGGAGCAGACGTTAACACCGAGGGAGGACTaGAGGGAACGTCTTGATTTTTCTCCGAATAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: CELEQTLTPRED*RERLDFSPNSN Trigger: ATTGCTATTCGGAGAAAAATCAAGACGTTCCCTTCAGTCCTCCCTCGGTGTTAACGTCTGCTCCAGCTCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433079.5 |
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| CDS GCA 72 bp | CCCTGGTTTCTGCTTTCCAGTTCCACACTCCAGTCGTaGTCCCACCTTTTACCTTCAAGGTATTGCTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PWFLLSSSTLQS*SHLLPSRYCCS Trigger: TGAACAGCAATACCTTGAAGGTAAAAGGTGGGAGCACGACTGGAGTGTGGAACTGGAAAGCAGAAACCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 72 bp | TTCCATACTAGACATAGAAGTAACACCCCTGGTTTCTaGTTTCCAGTTCCACACTCCAGTCGTGCTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: FHTRHRSNTPGF*FPVPHSSRAPT Trigger: GGTGGGAGCACGACTGGAGTGTGGAACTGGAAAGCAGAAACCAGGGGTGTTACTTCTATGTCTAGTATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CAA 72 bp | ACTGGTCCAAAAAGCTGCAGCAGGCCACTGAGTAACTaGGACATCTGTTGCCATGCTTGTTCATGCTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TGPKSCSRPLSN*DICCHACSCFP Trigger: GGGAAAGCATGAACAAGCATGGCAACAGATGTCCAAGTTACTCAGTGGCCTGCTGCAGCTTTTTGGACCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS TCA 72 bp | CTCTTTTTCACTATGTGCTGCCTTACAACTGTCACCTaGGGTTCGAGTAACTCTCCAACTAGCCAAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFFTMCCLTTVT*GSSNSPTSQAL Trigger: CAGGGCTTGGCTAGTTGGAGAGTTACTCGAACCTCAGGTGACAGTTGTAAGGCAGCACATAGTGAAAAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS CAA 72 bp | CAGAGACTCAATCCTCTGGCATTCTCAGGTTCAAGGTaGGAAAACGCATTAAGACGAGAGCCACACAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QRLNPLAFSGSR*ENALRREPHSQ Trigger: CTGACTGTGTGGCTCTCGTCTTAATGCGTTTTCCAACCTTGAACCTGAGAATGCCAGAGGATTGAGTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CAA 90 bp | ATGAACGTCCAGAGACTCAATCCTCTGGCATTCTCAGGTTCAAGGTaGGAAAACGCATTAAGACGAGAGCCACACAGTCAGCAGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: MNVQRLNPLAFSGSR*ENALRREPHSQQNL Trigger: CAGATTCTGCTGACTGTGTGGCTCTCGTCTTAATGCGTTTTCCAACCTTGAACCTGAGAATGCCAGAGGATTGAGTCTCTGGACGTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS TCA 72 bp | CTTTCCTACAGTCACCAAACCCACGCTCTGTTAAAATaGCATTTCGTGGCTCCTACTTTGTTTCCCCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSYSHQTHALLK*HFVAPTLFPRR Trigger: TCTCCGGGGAAACAAAGTAGGAGCCACGAAATGTCATTTTAACAGAGCGTGGGTTTGGTGACTGTAGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS TCA 72 bp | TTCCTCAAGGTCCCTGCTTTCACTTTAAAAGCTGTGTaGGTGCTTACATCCAGGTTTGCCGTGGAACTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FLKVPAFTLKAV*VLTSRFAVELQ Trigger: TTGGAGTTCCACGGCAAACCTGGATGTAAGCACTCACACAGCTTTTAAAGTGAAAGCAGGGACCTTGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 72 bp | CTGATCCAGACCCCAAGGGAGGACTCTTGTATCTCATaGAAGAAAGAATTCAGCTGTTACAGGGTGTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: LIQTPREDSCIS*KKEFSCYRVLS Trigger: TGATAACACCCTGTAACAGCTGAATTCTTTCTTGCATGAGATACAAGAGTCCTCCCTTGGGGTCTGGATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416999.1 |
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| CDS TCA 72 bp | TGCAAGTGCCAAGCGTGCTTATGCTACTATTCATTCTaGGATAGACAGATCATCAATGACCTTCTGGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CKCQACLCYYSF*DRQIINDLLGH Trigger: GTGACCCAGAAGGTCATTGATGATCTGTCTATCTCAGAATGAATAGTAGCATAAGCACGCTTGGCACTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS GCA 72 bp | TGGAATTACGTTCCTCCAGTAACTGTTGATGATGCTTaGAGGAGGCAAAATGCAATGCAGTTTTTCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: WNYVPPVTVDDA*RRQNAMQFFSS Trigger: GGAAGAGAAAAACTGCATTGCATTTTGCCTCCTGCAAGCATCATCAACAGTTACTGGAGGAACGTAATTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS GCA 72 bp | CACTTTAAAAGCTGTGTGAGTGCTTACATCCAGGTTTaGCGTGGAACTCCAAATGTCTGTGCTTCTAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: HFKSCVSAYIQV*RGTPNVCASKD Trigger: ATCTTTAGAAGCACAGACATTTGGAGTTCCACGGCAAACCTGGATGTAAGCACTCACACAGCTTTTAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CCA 72 bp | GCTCACTTGGCACTATCTTTAACAAGACTGTTTAGATaGCAATGCTCTGCTCATTCGCCCTTCTTTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: AHLALSLTRLFR*QCSAHSPFFQT Trigger: AGTTTGAAAGAAGGGCGAATGAGCAGAGCATTGCCATCTAAACAGTCTTGTTAAAGATAGTGCCAAGTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CAA 72 bp | ATTAGGGCTTTGTTGCTGACAACAGTGAAAACTTGTTaGTGTCAGGAAGTGAGGTACGGAGATATGACCTCT | + |
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Preference number: 6 (lower is better) Translates to: IRALLLTTVKTC*CQEVRYGDMTS Trigger: AGAGGTCATATCTCCGTACCTCACTTCCTGACACAAACAAGTTTTCACTGTTGTCAGCAACAAAGCCCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS GCA 72 bp | AGCAGATTGATTCATGGCAAACCTAGCTCAGCCACTTaGCTAGACTTCAGTTTATTTAGGATAAACCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SRLIHGKPSSAT*LDFSLFRINLR Trigger: TCTGAGGTTTATCCTAAATAAACTGAAGTCTAGGCAAGTGGCTGAGCTAGGTTTGCCATGAATCAATCTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000451786.5 ENST00000643135.1 ENST00000644804.1 ENST00000646587.1 |
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| CDS CAA 90 bp | AAATGCAATGCAGTTTTTCTCTTCCGCAGCTATATTAGGGCTTTGTaGCTGACAACAGTGAAAACTTGTTTGTGTCAGGAAGTGAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: KCNAVFLFRSYIRAL*LTTVKTCLCQEVRY Trigger: GTACCTCACTTCCTGACACAAACAAGTTTTCACTGTTGTCAGCAACAAAGCCCTAATATAGCTGCGGAAGAGAAAAACTGCATTGCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS TCA 72 bp | ATTTTGTTGGAGGACTATTCTACATTTCCAAAGCAATaGAGACATGACCCCAAACTAAACTCTCCTGCAACG | + |
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Preference number: 6 (lower is better) Translates to: ILLEDYSTFPKQ*RHDPKLNSPAT Trigger: CGTTGCAGGAGAGTTTAGTTTGGGGTCATGTCTTCATTGCTTTGGAAATGTAGAATAGTCCTCCAACAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS CAA 72 bp | AATGCAGTTTTTCTCTTCCGCAGCTATATTAGGGCTTaGTTGCTGACAACAGTGAAAACTTGTTTGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: NAVFLFRSYIRA*LLTTVKTCLCQ Trigger: CTGACACAAACAAGTTTTCACTGTTGTCAGCAACAAAGCCCTAATATAGCTGCGGAAGAGAAAAACTGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451786.5 |
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| CDS TCA 72 bp | TGTGTCACAAAGAGAGTTCTAAAAACCAGTATGTTCTaGGAAGTCCATACCTGCTACTTGGGAACTAAACAA | + |
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Preference number: 6 (lower is better) Translates to: CVTKRVLKTSMF*EVHTCYLGTKQ Trigger: TTGTTTAGTTCCCAAGTAGCAGGTATGGACTTCTCAGAACATACTGGTTTTTAGAACTCTCTTTGTGACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647388.1 |
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| CDS TCA 72 bp | AATCCATTAGTGGGTTGTAAAATAAATCCAGTGCACTaGAAGCAGCGTTTTTATGAAGATGAAACAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: NPLVGCKINPVH*KQRFYEDETDC Trigger: ACAGTCTGTTTCATCTTCATAAAAACGCTGCTTTCAGTGCACTGGATTTATTTTACAACCCACTAATGGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431189.1 |
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| CDS TCA 72 bp | AATCCATTAGTGGGTTGTAAAATAAATCCAGTGCACTaGAAGCAGCGTTTTTATGAAGATGAAACAGACCTT | + |
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Preference number: 6 (lower is better) Translates to: NPLVGCKINPVH*KQRFYEDETDL Trigger: AAGGTCTGTTTCATCTTCATAAAAACGCTGCTTTCAGTGCACTGGATTTATTTTACAACCCACTAATGGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647288.1 |
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