RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LIN9 (Homo sapiens)

Ensembl gene IDs: ENSG00000183814

Ensembl transcript IDs: ENST00000328205.9, ENST00000359525.2, ENST00000366808.6, ENST00000460719.5, ENST00000481685.1, ENST00000681046.1

Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGCTGGTCAGCAATGCTaGTTTAAGAAGCAGTACAGT +
Preference number: 2 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCAGQQC*FKKQYS
Trigger: ACTGTACTGCTTCTTAAACCAGCATTGCTGACCAGC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGCTGGTCAGCAATGCTaGTTTAAGAAGCAGTACAGT +
Preference number: 2 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHAGQQC*FKKQYS
Trigger: ACTGTACTGCTTCTTAAACCAGCATTGCTGACCAGC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCAAAAACAATGTCCCGTaGAGTTGGAATAATGAAATC +
Preference number: 2 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCKNNVP*SWNNEI
Trigger: GATTTCATTATTCCAACTGCACGGGACATTGTTTTT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAATTGCAGCAGTTGTCTaGATGTGTTGCGGTGAATTC +
Preference number: 2 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKIAAVV*MCCGEF
Trigger: GAATTCACCGCAACACATGCAGACAACTGCTGCAAT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACTTCATACTCTCCATTaGAGCAGTTGTCTGCATGTG +
Preference number: 2 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKLHTLH*SSCLHV
Trigger: CACATGCAGACAACTGCTGCAATGGAGAGTATGAAG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR CCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAGCTGGTCAGCAATGCTaGTTTAAGAAGCAGTACAGT +
Preference number: 2 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKAGQQC*FKKQYS
Trigger: ACTGTACTGCTTCTTAAACCAGCATTGCTGACCAGC...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAACTTTTGACCTGAACTaGTGGGAAGACATGCCAAAT +
Preference number: 2 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKTFDLN*WEDMPN
Trigger: ATTTGGCATGTCTTCCCATCAGTTCAGGTCAAAAGT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAACAACAATGCACTTTTaGCCTGAACTGATGGGAAGA +
Preference number: 2 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKTTMHF*PELMGR
Trigger: TCTTCCCATCAGTTCAGGTCAAAAGTGCATTGTTGT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAACTTCCCACACCTCATaGTGTTATCTTTTGAAGACT +
Preference number: 2 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKTSHTS*CYLLKT
Trigger: AGTCTTCAAAAGATAACATCATGAGGTGTGGGAAGT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTAAAAACAATGTCCCGTaGAGTTGGAATAATGAAATC +
Preference number: 2 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCKNNVP*SWNNEI
Trigger: GATTTCATTATTCCAACTGCACGGGACATTGTTTTT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAAACAAGCCTTTCTTCTaGATTTCACAGCACTGGTTA +
Preference number: 2 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKNKPFF*ISQHWL
Trigger: TAACCAGTGCTGTGAAATGCAGAAGAAAGGCTTGTT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATAAAAACAATGTCCCGTaGAGTTGGAATAATGAAATC +
Preference number: 2 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHKNNVP*SWNNEI
Trigger: GATTTCATTATTCCAACTGCACGGGACATTGTTTTT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAATCTCCATTGCAGCAGTaGTCTGCATGTGTTGCGGTG +
Preference number: 3 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKSPLQQ*SACVAV
Trigger: CACCGCAACACATGCAGACAACTGCTGCAATGGAGA...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCAGCAGTTAGGTTATTaGGTGTTGGAAGCCTATATA +
Preference number: 3 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCQQLGY*VLEAYI
Trigger: TATATAGGCTTCCAACACCAAATAACCTAACTGCTG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAATCTTCATACTCTCCATaGCAGCAGTTGTCTGCATGT +
Preference number: 3 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKSSYSP*QQLSAC
Trigger: ACATGCAGACAACTGCTGCAATGGAGAGTATGAAGA...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR TCA 72 bp AGTGGTTTCCTTAAAACTAGGACTTCCCACACCTCATaGTGTTATCTTTTGAAGACTGAGATGGTGATCAAC +
Preference number: 3 (lower is better)
Translates to: SGFLKTRTSHTS*CYLLKTEMVIN
Trigger: GTTGATCACCATCTCAGTCTTCAAAAGATAACATCATGAGGTGTGGGAAGTCCTAGTTTTAAGGAAACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCAGCAGTTAGGTTATTaGGTGTTGGAAGCCTATATA +
Preference number: 3 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHQQLGY*VLEAYI
Trigger: TATATAGGCTTCCAACACCAAATAACCTAACTGCTG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACAGCAGTTAGGTTATTaGGTGTTGGAAGCCTATATA +
Preference number: 3 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKQQLGY*VLEAYI
Trigger: TATATAGGCTTCCAACACCAAATAACCTAACTGCTG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR CCA 72 bp TTAGCTAAATATAAACTCTGCACTAAAGTTCTGCAGTaGCACAATACCAACAAAGAATACGGAAGCCTTTTT +
Preference number: 3 (lower is better)
Translates to: LAKYKLCTKVLQ*HNTNKEYGSLF
Trigger: AAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAGAACTTTAGTGCAGAGTTTATATTTAGCTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp GACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAACGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: DWGSSTSKLNLHADPKPKRAPPS*TSRAAF
Trigger: AAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCG...TTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCTCATATCTGTTGGCTaGTCTGCAGGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTLISVG*SAGWSP
Trigger: GGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAG...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR GCA 90 bp CTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGATCGAGGGAGGTTCGAATaGGGAGCTCGCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: LPLSSTSMLTPNLNICPDRGRFE*GARCPR
Trigger: CCGCGGGCAGCGAGCTCCGCATTCGAACCTCCCTCG...ATCAGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR GCA 90 bp GATGAGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTCGCTTTTTCAAAGGCTaGCCGCCGCGGTGCATTGTG +
Preference number: 4 (lower is better)
Translates to: DESLTDWGSSTSKLNLHARFFKG*PPRCIV
Trigger: CACAATGCACCGCGGCGGGCAGCCTTTGAAAAAGCG...AGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR GCA 90 bp GACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAAATCTGTTGGCTGATCTaGAGGCTGGAGCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DWGSSTSKLNLHADPKPKICWLI*RLEPLV
Trigger: GACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGAT...TTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CCA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCTGGAGCCCCTGGTCTaGAGCAAGCTCATAGCAATA +
Preference number: 4 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTLEPLV*SKLIAI
Trigger: TATTGCTATGAGCTTGCTCCAGACCAGGGGCTCCAG...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCCGAATGTTGGAAGCTaGGCTGCGTGCAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCPNVGS*AACSRG
Trigger: TCCCCGGCTGCACGCAGCTCAGCTTCCAACATTCGG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGGTTCTGGGTCGCATTaGCCGAGGGGGCTCTACGCA +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCGSGSH*PRGLYA
Trigger: TGCGTAGAGCCCCCTCGGGCAATGCGACCCAGAACC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTTCCGCGGCCCGCGCTaGAGCTGCGGGAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHFRGPR*SCGNCR
Trigger: CCTGCAGTTCCCGCAGCTGCAGCGCGGGCCGCGGAA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGAAACCCACGTTGCTTaGGCGCCTCCGTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCETHVA*APPSPH
Trigger: GTGAGGGGACGGAGGCGCCCAAGCAACGTGGGTTTC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000366808.6
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCGCCGCGGTGCATTGTaGGGCGGAGACTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCRRGAL*GGDCLC
Trigger: GCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR TCA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCGTTGCATATCTCCGCTaGAATTCAATGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTVAYLR*NSMLMG
Trigger: GCCCATCAGCATTGAATTTCAGCGGAGATATGCAAC...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTTCCCGAAACCCACGTTaGTTGGGCGCCTCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCSRNPR*LGASVP
Trigger: GGGGACGGAGGCGCCCAAGCAACGTGGGTTTCGGGA...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000366808.6
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGGCCCGCGCTGCAGCTaGGGGAACTGCAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCGPRCS*GNCRLF
Trigger: AAACAGCCTGCAGTTCCCGCAGCTGCAGCGCGGGCC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR GCA 90 bp CTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACTTCTTCCTCACACCTaGGTCTCATATCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LTDWGSSTSKLNLHADPKLLPHT*VSYLLA
Trigger: AGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAG...TTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGCTGTTTGTTCCGAGTaGAGAACGGGAGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCAVCSE*RTGGRP
Trigger: GGGCCTCCCTCCCGTTCTCCACTCGGAACAAACAGC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCRAPPS*TSRAAF
Trigger: AAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCTCATATCTGTTGGCTaGTCTGCAGGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCLISVG*SAGWSP
Trigger: GGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCGGGGAGCGAGACCTTaGGAGGTCATGAAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCRGARP*EVMKLV
Trigger: GACCAACTTCATGACCTCTCAAGGTCTCGCTCCCCG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACGAGGGAGGTTCGAATaGGGAGCTCGCTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKRGRFE*GARCPR
Trigger: CCGCGGGCAGCGAGCTCCGCATTCGAACCTCCCTCG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGGCGGAGACTGTCTTTaGGAGGGAGGTTCGAATGCG +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCGGDCL*EGGSNA
Trigger: CGCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR GCA 90 bp CTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGATGGCGGAGACTGTCTTTaGGAGGGAGGTTCGAATGCG +
Preference number: 4 (lower is better)
Translates to: LPLSSTSMLTPNLNICPDGGDCL*EGGSNA
Trigger: CGCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCC...ATCAGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTAGAAGCCCTCGGTTCTaGGTCGCATTGCCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCRSPRF*VALPEG
Trigger: CCCCTCGGGCAATGCGACCCAGAACCGAGGGCTTCT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR CCA 90 bp CTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGATCTCTCGTCAGGCAACTaGTCGAGCTCCGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LPLSSTSMLTPNLNICPDLSSGN*SSSAIL
Trigger: CAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAG...ATCAGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCTCTCGTCAGGCAACTaGTCGAGCTCCGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCLSSGN*SSSAIL
Trigger: CAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHRAPPS*TSRAAF
Trigger: AAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp GATGAGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGTGAACAAACCATCATaGACACCACGTAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: DESLTDWGSSTSKLNLHAVNKPS*TPRNRA
Trigger: AGCACGATTACGTGGTGTTCATGATGGTTTGTTCAC...AGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTGCAGCTGCGGGAACTaGAGGCTGTTTGTTCCGAGT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCCSCGN*RLFVPS
Trigger: ACTCGGAACAAACAGCCTGCAGTTCCCGCAGCTGCA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR GCA 90 bp CTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAAGTTGAGGAATTTGCATaGCGAACAATTTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LTDWGSSTSKLNLHADPKVEEFA*RTISCA
Trigger: AGCACAGGAAATTGTTCGGCATGCAAATTCCTCAAC...TTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTGTTGGAAGCTGAGCTaGGTGCAGCCGGGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHCWKLS*VQPGSE
Trigger: CTCGCTCCCCGGCTGCACGCAGCTCAGCTTCCAACA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGAAACCCACGTTGCTTaGGCGCCTCCGTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHETHVA*APPSPH
Trigger: GTGAGGGGACGGAGGCGCCCAAGCAACGTGGGTTTC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000366808.6
CDS-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKRAPPS*TSRAAF
Trigger: AAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp CTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAATTCCTTCTTTTAAACTaGCAAGGGCTTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LTDWGSSTSKLNLHADPKFLLLN*QGLLLK
Trigger: CTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGGAA...TTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCATCTATTTGTCCAGTaGACAAACCATCATGAACAC +
Preference number: 4 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTHLFVQ*TNHHEH
Trigger: GTGTTCATGATGGTTTGTTCACTGGACAAATAGATG...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp GACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAACATGAGGTTCATTACTaGGAACTTCATAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: DWGSSTSKLNLHADPKPKHEVHY*ELHSQG
Trigger: TCCCTGACTATGAAGTTCTCAGTAATGAACCTCATG...TTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTCATATCTGTTGGCTaGTCTGCAGGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCLISVG*SAGWSP
Trigger: GGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGCGTCTCATATCTGTTaGCTGATCTGCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCASHIC*LICRLE
Trigger: CTCCAGCCTGCAGATCAGCCAACAGATATGAGACGC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp CTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGATGCGTCTCATATCTGTTaGCTGATCTGCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPLSSTSMLTPNLNICPDASHIC*LICRLE
Trigger: CTCCAGCCTGCAGATCAGCCAACAGATATGAGACGC...ATCAGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CCA 90 bp GCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGAGTCTCTCACTGACTaGGGAAGCTCTACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ALPLSSTSMLTPNLNICPESLTD*GSSTSK
Trigger: CTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACTC...AGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCAAAACCAATCTTCTGTaGAGCTTTCTTATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTKTNLL*SFLIWC
Trigger: ACACCAGATAAGAAAGCTTCACAGAAGATTGGTTTT...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp GATGAGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTATTGGCATTGTCTCATaGGGTTCATTACTGAGAACT +
Preference number: 4 (lower is better)
Translates to: DESLTDWGSSTSKLNLHAIGIVS*GSLLRT
Trigger: AGTTCTCAGTAATGAACCTCATGAGACAATGCCAAT...AGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp GATGAGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGCTGAAATTCAATGCTaGTGGGCATGGAATATGATT +
Preference number: 4 (lower is better)
Translates to: DESLTDWGSSTSKLNLHAAEIQC*WAWNMI
Trigger: AATCATATTCCATGCCCATCAGCATTGAATTTCAGC...AGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCTCATATCTGTTGGCTaGTCTGCAGGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHLISVG*SAGWSP
Trigger: GGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGACCTTGAGAGGTCATaGAGTTGGTCATTTAGGCCG +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCDLERS*SWSFRP
Trigger: CGGCCTAAATGACCAACTTCATGACCTCTCAAGGTC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATATCTGTTGGCTGATCTaGAGGCTGGAGCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHICWLI*RLEPLV
Trigger: GACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGAT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCAGAAGAACATCTCCGTaGTTTTCCCATAAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCRRTSP*FSHKPP
Trigger: CGGCGGCTTATGGGAAAACCACGGAGATGTTCTTCT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp CTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGATAGAAGAACATCTCCGTaGTTTTCCCATAAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LPLSSTSMLTPNLNICPDRRTSP*FSHKPP
Trigger: CGGCGGCTTATGGGAAAACCACGGAGATGTTCTTCT...ATCAGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CCA 90 bp CTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGATCTTCATAGTCAGGGATaGTATGGGTTCCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPLSSTSMLTPNLNICPDLHSQG*YGFQAL
Trigger: CAGGGCTTGGAACCCATACCATCCCTGACTATGAAG...ATCAGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCTTCATAGTCAGGGATaGTATGGGTTCCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCLHSQG*YGFQAL
Trigger: CAGGGCTTGGAACCCATACCATCCCTGACTATGAAG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp GACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAAATTATCTATAATTGGTaGCTGGAGAGGAGGAGTATA +
Preference number: 4 (lower is better)
Translates to: DWGSSTSKLNLHADPKPKIIYNW*LERRSI
Trigger: TATACTCCTCCTCTCCAGTCACCAATTATAGATAAT...TTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGTTGCATATCTCCGCTaGAATTCAATGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCVAYLR*NSMLMG
Trigger: GCCCATCAGCATTGAATTTCAGCGGAGATATGCAAC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACTCATATCTGTTGGCTaGTCTGCAGGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKLISVG*SAGWSP
Trigger: GGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTGGCTCAGGCCACTCTaGATATGTGCAACATGGATT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCWLRPL*ICATWI
Trigger: AATCCATGTTGCACATATTCAGAGTGGCCTGAGCCA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACGCTTTTTCAAAGGCTaGCCGCCGCGGTGCATTGTG +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKRFFKG*PPRCIV
Trigger: CACAATGCACCGCGGCGGGCAGCCTTTGAAAAAGCG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAATCTGTTGGCTGATCTaGAGGCTGGAGCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKICWLI*RLEPLV
Trigger: GACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGAT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAAGTAGTTGAACAAATATaGTCTAAAGAAGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LTDWGSSTSKLNLHADPKVVEQI*SKEAKE
Trigger: CTCCTTTGCTTCTTTAGAGCATATTTGTTCAACTAC...TTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACTCTCGTCAGGCAACTaGTCGAGCTCCGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKLSSGN*SSSAIL
Trigger: CAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp CTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAAGATAATCTGGTCACTTaGATAAGAAATTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: LTDWGSSTSKLNLHADPKDNLVT*IRNSTG
Trigger: TCCAGTAGAATTTCTTATCCAAGTGACCAGATTATC...TTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGGAGCCCCTGGTCTaGAGCAAGCTCATAGCAATA +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCLEPLV*SKLIAI
Trigger: TATTGCTATGAGCTTGCTCCAGACCAGGGGCTCCAG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGCGTCTCATATCTGTTaGCTGATCTGCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCASHIC*LICRLE
Trigger: CTCCAGCCTGCAGATCAGCCAACAGATATGAGACGC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGCCTTTCCCGAATGTTaGAAGCTGAGCTGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHAFPEC*KLSCVQ
Trigger: CTGCACGCAGCTCAGCTTCCAACATTCGGGAAAGGC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGTGAACAAACCATCATaGACACCACGTAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCVNKPS*TPRNRA
Trigger: AGCACGATTACGTGGTGTTCATGATGGTTTGTTCAC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCATTGCAGCAGTTGTCTaGATGTGTTGCGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCIAAVV*MCCGEF
Trigger: GAATTCACCGCAACACATGCAGACAACTGCTGCAAT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTAGAAGAACATCTCCGTaGTTTTCCCATAAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCRRTSP*FSHKPP
Trigger: CGGCGGCTTATGGGAAAACCACGGAGATGTTCTTCT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTTCATAGTCAGGGATaGTATGGGTTCCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCLHSQG*YGFQAL
Trigger: CAGGGCTTGGAACCCATACCATCCCTGACTATGAAG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCTGGAGCCCCTGGTCTaGAGCAAGCTCATAGCAATA +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHLEPLV*SKLIAI
Trigger: TATTGCTATGAGCTTGCTCCAGACCAGGGGCTCCAG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCATGAGGTTCATTACTaGGAACTTCATAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCHEVHY*ELHSQG
Trigger: TCCCTGACTATGAAGTTCTCAGTAATGAACCTCATG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGTTGCATATCTCCGCTaGAATTCAATGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCVAYLR*NSMLMG
Trigger: GCCCATCAGCATTGAATTTCAGCGGAGATATGCAAC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTTGGCTCAGGCCACTCTaGATATGTGCAACATGGATT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCWLRPL*ICATWI
Trigger: AATCCATGTTGCACATATTCAGAGTGGCCTGAGCCA...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCACAACAATGCACTTTTaGCCTGAACTGATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCTTMHF*PELMGR
Trigger: TCTTCCCATCAGTTCAGGTCAAAAGTGCATTGTTGT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCAGAGCTTGTATTCCTaGCTTTCCAAACAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCQSLYS*LSKQVF
Trigger: AAACACCTGTTTGGAAAGGCAGGAATACAAGCTCTG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGATCAGAGCTTGTATTCCTaGCTTTCCAAACAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LPLSSTSMLTPNLNICPDQSLYS*LSKQVF
Trigger: AAACACCTGTTTGGAAAGGCAGGAATACAAGCTCTG...ATCAGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTTCTTCCTCACACCTaGGTCTCATATCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCLLPHT*VSYLLA
Trigger: AGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGTTGAGGAATTTGCATaGCGAACAATTTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCVEEFA*RTISCA
Trigger: AGCACAGGAAATTGTTCGGCATGCAAATTCCTCAAC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTCTGCACTAAAGTTCTaGAGTGGCACAATACCAACA +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCSALKF*SGTIPT
Trigger: TGTTGGTATTGTGCCACTGCAGAACTTTAGTGCAGA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCACCATTGCAACCCTCTaGTTTCTTTTAGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCTIATL*FLLGDL
Trigger: AAGGTCACCTAAAAGAAACCAGAGGGTTGCAATGGT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000681046.1
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATAGAAGAACATCTCCGTaGTTTTCCCATAAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHRRTSP*FSHKPP
Trigger: CGGCGGCTTATGGGAAAACCACGGAGATGTTCTTCT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCTTCATAGTCAGGGATaGTATGGGTTCCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHLHSQG*YGFQAL
Trigger: CAGGGCTTGGAACCCATACCATCCCTGACTATGAAG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACTGGAGCCCCTGGTCTaGAGCAAGCTCATAGCAATA +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKLEPLV*SKLIAI
Trigger: TATTGCTATGAGCTTGCTCCAGACCAGGGGCTCCAG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
3UTR CAA 72 bp AAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTaGTCTGCATGTGTTGCGGTGAATTCATGCACATTA +
Preference number: 4 (lower is better)
Translates to: KDQVSSYSPLQQ*SACVAVNSCTL
Trigger: TAATGTGCATGAATTCACCGCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAGGGCTCTACGCAAAGTaGAATACTCACAGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKGLYAK*NTHSSR
Trigger: TCGGGAACTGTGAGTATTTCACTTTGCGTAGAGCCC...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTTCCTTCTTTTAAACTaGCAAGGGCTTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCFLLLN*QGLLLK
Trigger: CTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGGAA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp GCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGAGATCTTTGAATTGTaGAACATCTGCAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: ALPLSSTSMLTPNLNICPEIFEL*NICNFP
Trigger: AGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTC...AGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGTGAACAAACCATCATaGACACCACGTAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCVNKPS*TPRNRA
Trigger: AGCACGATTACGTGGTGTTCATGATGGTTTGTTCAC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCATCTATTTGTCCAGTaGACAAACCATCATGAACAC +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCHLFVQ*TNHHEH
Trigger: GTGTTCATGATGGTTTGTTCACTGGACAAATAGATG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCATTGGCATTGTCTCATaGGGTTCATTACTGAGAACT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCIGIVS*GSLLRT
Trigger: AGTTCTCAGTAATGAACCTCATGAGACAATGCCAAT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGCTGAAATTCAATGCTaGTGGGCATGGAATATGATT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCAEIQC*WAWNMI
Trigger: AATCATATTCCATGCCCATCAGCATTGAATTTCAGC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTTGCATATCTCCGCTaGAATTCAATGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHVAYLR*NSMLMG
Trigger: GCCCATCAGCATTGAATTTCAGCGGAGATATGCAAC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCACTTCCCACACCTCATaGTGTTATCTTTTGAAGACT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCTSHTS*CYLLKT
Trigger: AGTCTTCAAAAGATAACATCATGAGGTGTGGGAAGT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAATATATGTCCTGATCTCCAGAACAATTGTTaGATATCTCCGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: LPLSSTSMLTPNLNICPDLQNNC*ISPLKF
Trigger: GAATTTCAGCGGAGATATGCAACAATTGTTCTGGAG...ATCAGGACATATATTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCTTCTTCCTCACACCTaGGTCTCATATCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHLLPHT*VSYLLA
Trigger: AGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTATTGCAGCAGTTGTCTaGATGTGTTGCGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCIAAVV*MCCGEF
Trigger: GAATTCACCGCAACACATGCAGACAACTGCTGCAAT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTTCATACTCTCCATTaGAGCAGTTGTCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCLHTLH*SSCLHV
Trigger: CACATGCAGACAACTGCTGCAATGGAGAGTATGAAG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCAACAAGCCTTTCTTCTaGATTTCACAGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCNKPFF*ISQHWL
Trigger: TAACCAGTGCTGTGAAATGCAGAAGAAAGGCTTGTT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACTTCATAGTCAGGGATaGTATGGGTTCCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKLHSQG*YGFQAL
Trigger: CAGGGCTTGGAACCCATACCATCCCTGACTATGAAG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTTACTCAGTCTCTGTTaGTGTTATTTGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCLLSLC*CYLLQR
Trigger: CCTTTGCAGCAAATAACACCAACAGAGACTGAGTAA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGAACAAACCATCATaGACACCACGTAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHVNKPS*TPRNRA
Trigger: AGCACGATTACGTGGTGTTCATGATGGTTTGTTCAC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCATTATCTATAATTGGTaGCTGGAGAGGAGGAGTATA +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCIIYNW*LERRSI
Trigger: TATACTCCTCCTCTCCAGTCACCAATTATAGATAAT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAATGGCTCAGGCCACTCTaGATATGTGCAACATGGATT +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKWLRPL*ICATWI
Trigger: AATCCATGTTGCACATATTCAGAGTGGCCTGAGCCA...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATACACTGCCACCGACATaGATAAAAAGACCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHTLPPT*IKRPGF
Trigger: GAAACCTGGTCTTTTTATTCATGTCGGTGGCAGTGT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTACTTTTGACCTGAACTaGTGGGAAGACATGCCAAAT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCTFDLN*WEDMPN
Trigger: ATTTGGCATGTCTTCCCATCAGTTCAGGTCAAAAGT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTACAACAATGCACTTTTaGCCTGAACTGATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCTTMHF*PELMGR
Trigger: TCTTCCCATCAGTTCAGGTCAAAAGTGCATTGTTGT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCAGAGCTTGTATTCCTaGCTTTCCAAACAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCQSLYS*LSKQVF
Trigger: AAACACCTGTTTGGAAAGGCAGGAATACAAGCTCTG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGTTGAGGAATTTGCATaGCGAACAATTTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCVEEFA*RTISCA
Trigger: AGCACAGGAAATTGTTCGGCATGCAAATTCCTCAAC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGCCACTCTGAATATGTaGAACATGGATTTCTACATT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCATLNM*NMDFYI
Trigger: AATGTAGAAATCCATGTTGCACATATTCAGAGTGGC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATATTGCAGCAGTTGTCTaGATGTGTTGCGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHIAAVV*MCCGEF
Trigger: GAATTCACCGCAACACATGCAGACAACTGCTGCAAT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCTTCATACTCTCCATTaGAGCAGTTGTCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHLHTLH*SSCLHV
Trigger: CACATGCAGACAACTGCTGCAATGGAGAGTATGAAG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTACCATTGCAACCCTCTaGTTTCTTTTAGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCTIATL*FLLGDL
Trigger: AAGGTCACCTAAAAGAAACCAGAGGGTTGCAATGGT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000681046.1
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCACTAAAGTTCTGCAGTaGCACAATACCAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCTKVLQ*HNTNKE
Trigger: TTCTTTGTTGGTATTGTGCCACTGCAGAACTTTAGT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTTTCGTTTTGAATTTCTaGAAGGCATTTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCFVLNF*KAFPQQ
Trigger: CTGCTGTGGAAATGCCTTTCAGAAATTCAAAACGAA...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTATTGGCATTGTCTCATaGGGTTCATTACTGAGAACT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCIGIVS*GSLLRT
Trigger: AGTTCTCAGTAATGAACCTCATGAGACAATGCCAAT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAACACTGCCACCGACATaGATAAAAAGACCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKTLPPT*IKRPGF
Trigger: GAAACCTGGTCTTTTTATTCATGTCGGTGGCAGTGT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTACTTCCCACACCTCATaGTGTTATCTTTTGAAGACT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCTSHTS*CYLLKT
Trigger: AGTCTTCAAAAGATAACATCATGAGGTGTGGGAAGT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATACTTTTGACCTGAACTaGTGGGAAGACATGCCAAAT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHTFDLN*WEDMPN
Trigger: ATTTGGCATGTCTTCCCATCAGTTCAGGTCAAAAGT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTCCAGAACAATTGTTaGATATCTCCGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCLQNNC*ISPLKF
Trigger: GAATTTCAGCGGAGATATGCAACAATTGTTCTGGAG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTAACAAGCCTTTCTTCTaGATTTCACAGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCNKPFF*ISQHWL
Trigger: TAACCAGTGCTGTGAAATGCAGAAGAAAGGCTTGTT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTCTGCACTAAAGTTCTaGAGTGGCACAATACCAACA +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHSALKF*SGTIPT
Trigger: TGTTGGTATTGTGCCACTGCAGAACTTTAGTGCAGA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATACCATTGCAACCCTCTaGTTTCTTTTAGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHTIATL*FLLGDL
Trigger: AAGGTCACCTAAAAGAAACCAGAGGGTTGCAATGGT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000681046.1
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTGCTGTAAATTTCTGTaGAACCATTGCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHCCKFL*NHCNPL
Trigger: CAGAGGGTTGCAATGGTTCCACAGAAATTTACAGCA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000681046.1
CDS-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTTTACTCAGTCTCTGTTaGTGTTATTTGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCLLSLC*CYLLQR
Trigger: CCTTTGCAGCAAATAACACCAACAGAGACTGAGTAA...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCAATGTCCCGTGCAGTTaGAATAATGAAATCTTTACT +
Preference number: 4 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCNVPCS*NNEIFT
Trigger: AGTAAAGATTTCATTATTCCAACTGCACGGGACATT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTTCGTTTTGAATTTCTaGAAGGCATTTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHFVLNF*KAFPQQ
Trigger: CTGCTGTGGAAATGCCTTTCAGAAATTCAAAACGAA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTAAGTCGACTTCGTTTTaGATTTCTGAAAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCKSTSF*ISERHF
Trigger: GAAATGCCTTTCAGAAATTCAAAACGAAGTCGACTT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTAAAACCAATCTTCTGTaGAGCTTTCTTATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCKTNLL*SFLIWC
Trigger: ACACCAGATAAGAAAGCTTCACAGAAGATTGGTTTT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGAGATCTTTGAATTGTaGAACATCTGCAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCEIFEL*NICNFP
Trigger: AGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCATCTATTTGTCCAGTaGACAAACCATCATGAACAC +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHHLFVQ*TNHHEH
Trigger: GTGTTCATGATGGTTTGTTCACTGGACAAATAGATG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACATGAGGTTCATTACTaGGAACTTCATAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKHEVHY*ELHSQG
Trigger: TCCCTGACTATGAAGTTCTCAGTAATGAACCTCATG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATATTGGCATTGTCTCATaGGGTTCATTACTGAGAACT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHIGIVS*GSLLRT
Trigger: AGTTCTCAGTAATGAACCTCATGAGACAATGCCAAT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTATTATCTATAATTGGTaGCTGGAGAGGAGGAGTATA +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCIIYNW*LERRSI
Trigger: TATACTCCTCCTCTCCAGTCACCAATTATAGATAAT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGCTGAAATTCAATGCTaGTGGGCATGGAATATGATT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHAEIQC*WAWNMI
Trigger: AATCATATTCCATGCCCATCAGCATTGAATTTCAGC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATACTTCCCACACCTCATaGTGTTATCTTTTGAAGACT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHTSHTS*CYLLKT
Trigger: AGTCTTCAAAAGATAACATCATGAGGTGTGGGAAGT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACAGAGCTTGTATTCCTaGCTTTCCAAACAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKQSLYS*LSKQVF
Trigger: AAACACCTGTTTGGAAAGGCAGGAATACAAGCTCTG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCTCCAGAACAATTGTTaGATATCTCCGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHLQNNC*ISPLKF
Trigger: GAATTTCAGCGGAGATATGCAACAATTGTTCTGGAG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGCCACTCTGAATATGTaGAACATGGATTTCTACATT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCATLNM*NMDFYI
Trigger: AATGTAGAAATCCATGTTGCACATATTCAGAGTGGC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAATCTGCACTAAAGTTCTaGAGTGGCACAATACCAACA +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKSALKF*SGTIPT
Trigger: TGTTGGTATTGTGCCACTGCAGAACTTTAGTGCAGA...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTTACTCAGTCTCTGTTaGTGTTATTTGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHLLSLC*CYLLQR
Trigger: CCTTTGCAGCAAATAACACCAACAGAGACTGAGTAA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTACTAAAGTTCTGCAGTaGCACAATACCAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCTKVLQ*HNTNKE
Trigger: TTCTTTGTTGGTATTGTGCCACTGCAGAACTTTAGT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAATTCCTTCTTTTAAACTaGCAAGGGCTTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKFLLLN*QGLLLK
Trigger: CTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGGAA...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATAAAACCAATCTTCTGTaGAGCTTTCTTATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHKTNLL*SFLIWC
Trigger: ACACCAGATAAGAAAGCTTCACAGAAGATTGGTTTT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGAGATCTTTGAATTGTaGAACATCTGCAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHEIFEL*NICNFP
Trigger: AGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAATTGGCATTGTCTCATaGGGTTCATTACTGAGAACT +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKIGIVS*GSLLRT
Trigger: AGTTCTCAGTAATGAACCTCATGAGACAATGCCAAT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACTCCAGAACAATTGTTaGATATCTCCGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKLQNNC*ISPLKF
Trigger: GAATTTCAGCGGAGATATGCAACAATTGTTCTGGAG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGCTAAATATAAACTCTaGACTAAAGTTCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHAKYKL*TKVLQW
Trigger: CCACTGCAGAACTTTAGTGCAGAGTTTATATTTAGC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTAATGTCCCGTGCAGTTaGAATAATGAAATCTTTACT +
Preference number: 4 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCNVPCS*NNEIFT
Trigger: AGTAAAGATTTCATTATTCCAACTGCACGGGACATT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATACTAAAGTTCTGCAGTaGCACAATACCAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHTKVLQ*HNTNKE
Trigger: TTCTTTGTTGGTATTGTGCCACTGCAGAACTTTAGT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR TCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAATTATCTATAATTGGTaGCTGGAGAGGAGGAGTATA +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKIIYNW*LERRSI
Trigger: TATACTCCTCCTCTCCAGTCACCAATTATAGATAAT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAGCCACTCTGAATATGTaGAACATGGATTTCTACATT +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKATLNM*NMDFYI
Trigger: AATGTAGAAATCCATGTTGCACATATTCAGAGTGGC...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAGCTAAATATAAACTCTaGACTAAAGTTCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKAKYKL*TKVLQW
Trigger: CCACTGCAGAACTTTAGTGCAGAGTTTATATTTAGC...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGATAATCTGGTCACTTaGATAAGAAATTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHDNLVT*IRNSTG
Trigger: TCCAGTAGAATTTCTTATCCAAGTGACCAGATTATC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAACTAAAGTTCTGCAGTaGCACAATACCAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKTKVLQ*HNTNKE
Trigger: TTCTTTGTTGGTATTGTGCCACTGCAGAACTTTAGT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR GCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAAAAAACAATGTCCCGTaGAGTTGGAATAATGAAATC +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKKNNVP*SWNNEI
Trigger: GATTTCATTATTCCAACTGCACGGGACATTGTTTTT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
36% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAGATAATCTGGTCACTTaGATAAGAAATTCTACTGGA +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKDNLVT*IRNSTG
Trigger: TCCAGTAGAATTTCTTATCCAAGTGACCAGATTATC...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CCA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAAATGTCCCGTGCAGTTaGAATAATGAAATCTTTACT +
Preference number: 4 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKNVPCS*NNEIFT
Trigger: AGTAAAGATTTCATTATTCCAACTGCACGGGACATT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS GCA 90 bp GTCCCGCCCGGGCCCCGCTCCCGGCGCATGTTCCGCGGCCCGCGCTaGAGCTGCGGGAACTGCAGGCTGTTTGTTCCGAGTGGAGAACGG +
Preference number: 5 (lower is better)
Translates to: VPPGPRSRRMFRGPR*SCGNCRLFVPSGER
Trigger: CCGTTCTCCACTCGGAACAAACAGCCTGCAGTTCCCGCAGCTGCAGCGCGGGCCGCGGAACATGCGCCGGGAGCGGGGCCCGGGCGGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS CCA 90 bp CGGCGGCAACACCGGAGTGGGAGGACTAGGGGACCACAGTGGGGCTaGCAGTCAGCCCACCTGCCCAGCGGAGGGCACGGCCGTCCGTCC +
Preference number: 5 (lower is better)
Translates to: RRQHRSGRTRGPQWG*QSAHLPSGGHGRPS
Trigger: GGACGGACGGCCGTGCCCTCCGCTGGGCAGGTGGGCTGACTGCCAGCCCCACTGTGGTCCCCTAGTCCTCCCACTCCGGTGTTGCCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359525.2
CDS GCA 90 bp CGCTCCCGGCGCATGTTCCGCGGCCCGCGCTGCAGCTGCGGGAACTaGAGGCTGTTTGTTCCGAGTGGAGAACGGGAGGGAGGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: RSRRMFRGPRCSCGN*RLFVPSGEREGGPG
Trigger: GCCGGGGCCTCCCTCCCGTTCTCCACTCGGAACAAACAGCCTGCAGTTCCCGCAGCTGCAGCGCGGGCCGCGGAACATGCGCCGGGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS GCA 90 bp CGGTGCATTGTGGGGCGGAGACTGTCTTTGCGAGGGAGGTTCGAATaGGGAGCTCGCTGCCCGCGGCGCCGCGCTGCGCTGCTCCCGCCG +
Preference number: 5 (lower is better)
Translates to: RCIVGRRLSLRGRFE*GARCPRRRAALLPP
Trigger: CGGCGGGAGCAGCGCAGCGCGGCGCCGCGGGCAGCGAGCTCCGCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS GCA 90 bp TCAAAGGCTGCCCGCCGCGGTGCATTGTGGGGCGGAGACTGTCTTTaGGAGGGAGGTTCGAATGCGGAGCTCGCTGCCCGCGGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: SKAARRGALWGGDCL*EGGSNAELAARGAA
Trigger: CGCGGCGCCGCGGGCAGCGAGCTCCGCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCAGCCTTTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS GCA 90 bp TCGAGCTCCGCCATCTTGAACGAGCCGCGCCGCTTTTTCAAAGGCTaGCCGCCGCGGTGCATTGTGGGGCGGAGACTGTCTTTGCGAGGG +
Preference number: 5 (lower is better)
Translates to: SSSAILNEPRRFFKG*PPRCIVGRRLSLRG
Trigger: CCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS TCA 90 bp TTGCTGAAGAGCTCTCGTCAGGCAACTGGTCGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTTTCAAAGGCTGCCCGCCGCGGTGCA +
Preference number: 5 (lower is better)
Translates to: LLKSSRQATGRAPPS*TSRAAFSKAARRGA
Trigger: TGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS GCA 90 bp CCCTCGCGATCCGGGCACGCCTTTCCCGAATGTTGGAAGCTGAGCTaGGTGCAGCCGGGGAGCGAGACCTTGAGAGGTCATGAAGTTGGT +
Preference number: 5 (lower is better)
Translates to: PSRSGHAFPECWKLS*VQPGSETLRGHEVG
Trigger: ACCAACTTCATGACCTCTCAAGGTCTCGCTCCCCGGCTGCACGCAGCTCAGCTTCCAACATTCGGGAAAGGCGTGCCCGGATCGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS TCA 90 bp GCCCTCGGTTCTGGGTCGCATTGCCCGAGGGGGCTCTACGCAAAGTaGAATACTCACAGTTCCCGAAACCCACGTTGCTTGGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ALGSGSHCPRGLYAK*NTHSSRNPRCLGAS
Trigger: GGAGGCGCCCAAGCAACGTGGGTTTCGGGAACTGTGAGTATTTCACTTTGCGTAGAGCCCCCTCGGGCAATGCGACCCAGAACCGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS GCA 90 bp ATCTTGAACGAGCCGCGCCGCTTTTTCAAAGGCTGCCCGCCGCGGTaGATTGTGGGGCGGAGACTGTCTTTGCGAGGGAGGTTCGAATGC +
Preference number: 5 (lower is better)
Translates to: ILNEPRRFFKGCPPR*IVGRRLSLRGRFEC
Trigger: GCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS-3UTR CAA 90 bp GACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAACCTAAAGCCCGCCGCGGTGCATaGTGGGGCGGAGACTGTCTT +
Preference number: 5 (lower is better)
Translates to: DWGSSTSKLNLHADPKPKARRGA*WGGDCL
Trigger: AAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGC...TTTAGGTTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp CTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAATCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: LTDWGSSTSKLNLHADPKSSSAI*NEPRRF
Trigger: AAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGA...TTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS TCA 90 bp GAAGCTGAGCTGCGTGCAGCCGGGGAGCGAGACCTTGAGAGGTCATaGAGTTGGTCATTTAGGCCGACAGCTAAAGAACTGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: EAELRAAGERDLERS*SWSFRPTAKELFCS
Trigger: TGAGCAGAACAGTTCTTTAGCTGTCGGCCTAAATGACCAACTTCATGACCTCTCAAGGTCTCGCTCCCCGGCTGCACGCAGCTCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCGGTTCTGGGTCGCATaGCCCGAGGGGGCTCTACGC +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCRFWVA*PEGALR
Trigger: GCGTAGAGCCCCCTCGGGCAATGCGACCCAGAACCG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGCCCGCCGCGGTGCATaGTGGGGCGGAGACTGTCTT +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCARRGA*WGGDCL
Trigger: AAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR CAA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCGCAGGGCTGTCCTGTaGAGGAATTTGCATGCCGAA +
Preference number: 5 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTRRAVL*RNLHAE
Trigger: TTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCG...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCSSSAI*NEPRRF
Trigger: AAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCAGAAGGCCGCTGTTTTaGTCCAAAGGCAGCAATTGG +
Preference number: 5 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTRRPLF*SKGSNW
Trigger: CCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCT...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTTTCCCGAAACCCACGTaGCTTGGGCGCCTCCGTCCC +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCFPKPT*LGRLRP
Trigger: GGGACGGAGGCGCCCAAGCAACGTGGGTTTCGGGAA...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000366808.6
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTTCCCGAAACCCACGTaGCTTGGGCGCCTCCGTCCC +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHFPKPT*LGRLRP
Trigger: GGGACGGAGGCGCCCAAGCAACGTGGGTTTCGGGAA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000366808.6
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGGAACTGCAGGCTGTTaGTTCCGAGTGGAGAACGGG +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCGTAGC*FRVENG
Trigger: CCCGTTCTCCACTCGGAACAAACAGCCTGCAGTTCC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTTCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCSSSAI*NEPRRF
Trigger: AAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGA...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCAAGCTCCAGAACAATaGTTGCATATCTCCGCTGAA +
Preference number: 5 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTQAPEQ*LHISAE
Trigger: TTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTG...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGGGCGGAGACTGTCTTaGCGAGGGAGGTTCGAATGC +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCGRRLS*RGRFEC
Trigger: GCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCCC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHSSSAI*NEPRRF
Trigger: AAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp GATGAGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTTTTCCACAGCAGAGCTaGTATTCCTGCCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: DESLTDWGSSTSKLNLHAFPQQS*YSCLSK
Trigger: TTTGGAAAGGCAGGAATACAAGCTCTGCTGTGGAAA...AGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp CTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAAGCTCCAGAACAATTGTaGCATATCTCCGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: LTDWGSSTSKLNLHADPKAPEQL*HISAEI
Trigger: AATTTCAGCGGAGATATGCAACAATTGTTCTGGAGC...TTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp GATGAGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGTCCTGTTGAGGAATTaGCATGCCGAACAATTTCCT +
Preference number: 5 (lower is better)
Translates to: DESLTDWGSSTSKLNLHAVLLRN*HAEQFP
Trigger: AGGAAATTGTTCGGCATGCAAATTCCTCAACAGGAC...AGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCCGCAGGGCTGTCCTGTaGAGGAATTTGCATGCCGAA +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCRRAVL*RNLHAE
Trigger: TTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCG...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp GATGAGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTTGTGCTTTAGGAAGCTaGAGCAGATTACGTAATCGA +
Preference number: 5 (lower is better)
Translates to: DESLTDWGSSTSKLNLHACALGS*SRLRNR
Trigger: TCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACA...AGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp CTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCCCAAATCATCTGGGAGATCTTaGAATTGTGAAACATCTGCA +
Preference number: 5 (lower is better)
Translates to: LTDWGSSTSKLNLHADPKSSGRS*NCETSA
Trigger: TGCAGATGTTTCACAATTCAAAGATCTCCCAGATGA...TTTGGGGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp GATGAGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTATCCACAGCATCTATTaGTCCAGTGAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: DESLTDWGSSTSKLNLHAIHSIY*SSEQTI
Trigger: GATGGTTTGTTCACTGGACAAATAGATGCTGTGGAT...AGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCGCCTTTCCCGAATGTaGGAAGCTGAGCTGCGTGCA +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCRLSRM*EAELRA
Trigger: TGCACGCAGCTCAGCTTCCAACATTCGGGAAAGGCG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCAGAAGGCCGCTGTTTTaGTCCAAAGGCAGCAATTGG +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCRRPLF*SKGSNW
Trigger: CCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCACTTTATGCAAAACTTaGTTTAGGTCCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTTLCKT*FRSLFS
Trigger: GCTGAACAAGGACCTAAACAAAGTTTTGCATAAAGT...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS-3UTR CAA 90 bp AGTCTCTCACTGACTGGGGAAGCTCTACCTCTAAGCTCAACCTCCATGCTGACCGAGTCTGTAAGTGATTaGAATTCAAAGGAATTCAGG +
Preference number: 5 (lower is better)
Translates to: SLSLTGEALPLSSTSMLTESVSD*NSKEFR
Trigger: CCTGAATTCCTTTGAATTCAAATCACTTACAGACTC...GGTCAGCATGGAGGTTGAGCTTAGAGGTAGAGCTTCCCCAGTCAGTGAGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481685.1
CDS GCA 90 bp AGATTTTCATTTTCAACGCAGGGCTGTCCTGTTGAGGAATTTGCATaGCGAACAATTTCCTGTGCTTCTTCCTCACACCTGCGTCTCATA +
Preference number: 5 (lower is better)
Translates to: RFSFSTQGCPVEEFA*RTISCASSSHLRLI
Trigger: TATGAGACGCAGGTGTGAGGAAGAAGCACAGGAAATTGTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCGCAGGGCTGTCCTGTaGAGGAATTTGCATGCCGAA +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHRRAVL*RNLHAE
Trigger: TTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTTCTCCATTGCAGCAGTaGTCTGCATGTGTTGCGGTG +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCSPLQQ*SACVAV
Trigger: CACCGCAACACATGCAGACAACTGCTGCAATGGAGA...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACCGGGGAGCGAGACCTaGAGAGGTCATGAAGTTGGT +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKPGSET*RGHEVG
Trigger: ACCAACTTCATGACCTCTCAAGGTCTCGCTCCCCGG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTTTCCACAGCAGAGCTaGTATTCCTGCCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCFPQQS*YSCLSK
Trigger: TTTGGAAAGGCAGGAATACAAGCTCTGCTGTGGAAA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGTCCTGTTGAGGAATTaGCATGCCGAACAATTTCCT +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCVLLRN*HAEQFP
Trigger: AGGAAATTGTTCGGCATGCAAATTCCTCAACAGGAC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACGCAGGGCTGTCCTGTaGAGGAATTTGCATGCCGAA +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKRRAVL*RNLHAE
Trigger: TTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTCTTCATACTCTCCATaGCAGCAGTTGTCTGCATGT +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCSSYSP*QQLSAC
Trigger: ACATGCAGACAACTGCTGCAATGGAGAGTATGAAGA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCATTTCTGTGGAACCATaGCAACCCTCTGGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCISVEP*QPSGFF
Trigger: AAAGAAACCAGAGGGTTGCAATGGTTCCACAGAAAT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000681046.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCATCCACAGCATCTATTaGTCCAGTGAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCIHSIY*SSEQTI
Trigger: GATGGTTTGTTCACTGGACAAATAGATGCTGTGGAT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATAGAAGGCCGCTGTTTTaGTCCAAAGGCAGCAATTGG +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHRRPLF*SKGSNW
Trigger: CCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGCTCCAGAACAATTGTaGCATATCTCCGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCAPEQL*HISAEI
Trigger: AATTTCAGCGGAGATATGCAACAATTGTTCTGGAGC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTTTTCCACAGCAGAGCTaGTATTCCTGCCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCFPQQS*YSCLSK
Trigger: TTTGGAAAGGCAGGAATACAAGCTCTGCTGTGGAAA...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTCATCTGGGAGATCTTaGAATTGTGAAACATCTGCA +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCSSGRS*NCETSA
Trigger: TGCAGATGTTTCACAATTCAAAGATCTCCCAGATGA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAAGAAGGCCGCTGTTTTaGTCCAAAGGCAGCAATTGG +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKRRPLF*SKGSNW
Trigger: CCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCAAGCTCCAGAACAATaGTTGCATATCTCCGCTGAA +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCQAPEQ*LHISAE
Trigger: TTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCTTTACTCAGTCTCTGTaGGTGTTATTTGCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCFTQSL*VLFAAK
Trigger: CTTTGCAGCAAATAACACCAACAGAGACTGAGTAAA...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTTTCCACAGCAGAGCTaGTATTCCTGCCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHFPQQS*YSCLSK
Trigger: TTTGGAAAGGCAGGAATACAAGCTCTGCTGTGGAAA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTATCCACAGCATCTATTaGTCCAGTGAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCIHSIY*SSEQTI
Trigger: GATGGTTTGTTCACTGGACAAATAGATGCTGTGGAT...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGCTCCAGAACAATTGTaGCATATCTCCGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCAPEQL*HISAEI
Trigger: AATTTCAGCGGAGATATGCAACAATTGTTCTGGAGC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCAAGCTCCAGAACAATaGTTGCATATCTCCGCTGAA +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHQAPEQ*LHISAE
Trigger: TTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCACTTTATGCAAAACTTaGTTTAGGTCCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCTLCKT*FRSLFS
Trigger: GCTGAACAAGGACCTAAACAAAGTTTTGCATAAAGT...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTCCTGTTGAGGAATTaGCATGCCGAACAATTTCCT +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHVLLRN*HAEQFP
Trigger: AGGAAATTGTTCGGCATGCAAATTCCTCAACAGGAC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp AAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGTGTTGCGAGTCTGTAAGTGATTaGAATTCAAAGGAATTCAGG +
Preference number: 5 (lower is better)
Translates to: KRPGFFILSIAAVVCMCCESVSD*NSKEFR
Trigger: CCTGAATTCCTTTGAATTCAAATCACTTACAGACTC...GCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTCTGTTGGTGTTATTaGCTGCAAAGGCATGTAAGT +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCLCWCY*LQRHVS
Trigger: ACTTACATGCCTTTGCAGCAAATAACACCAACAGAG...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAATTTCCACAGCAGAGCTaGTATTCCTGCCTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKFPQQS*YSCLSK
Trigger: TTTGGAAAGGCAGGAATACAAGCTCTGCTGTGGAAA...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATATTTCTGTGGAACCATaGCAACCCTCTGGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHISVEP*QPSGFF
Trigger: AAAGAAACCAGAGGGTTGCAATGGTTCCACAGAAAT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTGTGCTTTAGGAAGCTaGAGCAGATTACGTAATCGA +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHCALGS*SRLRNR
Trigger: TCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATATCCACAGCATCTATTaGTCCAGTGAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHIHSIY*SSEQTI
Trigger: GATGGTTTGTTCACTGGACAAATAGATGCTGTGGAT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATGCTCCAGAACAATTGTaGCATATCTCCGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHAPEQL*HISAEI
Trigger: AATTTCAGCGGAGATATGCAACAATTGTTCTGGAGC...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACAAGCTCCAGAACAATaGTTGCATATCTCCGCTGAA +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKQAPEQ*LHISAE
Trigger: TTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAGTCCTGTTGAGGAATTaGCATGCCGAACAATTTCCT +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKVLLRN*HAEQFP
Trigger: AGGAAATTGTTCGGCATGCAAATTCCTCAACAGGAC...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATCTCTGTTGGTGTTATTaGCTGCAAAGGCATGTAAGT +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHLCWCY*LQRHVS
Trigger: ACTTACATGCCTTTGCAGCAAATAACACCAACAGAG...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTTTTACTCAGTCTCTGTaGGTGTTATTTGCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCFTQSL*VLFAAK
Trigger: CTTTGCAGCAAATAACACCAACAGAGACTGAGTAAA...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAATGTGCTTTAGGAAGCTaGAGCAGATTACGTAATCGA +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKCALGS*SRLRNR
Trigger: TCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACA...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATTCATCTGGGAGATCTTaGAATTGTGAAACATCTGCA +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHSSGRS*NCETSA
Trigger: TGCAGATGTTTCACAATTCAAAGATCTCCCAGATGA...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp ACCGACATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTGAGTCTGTAAGTGATTaGAATTCAAAGGAATTCAGG +
Preference number: 5 (lower is better)
Translates to: TDMNKKTRFLHTLHCSSCESVSD*NSKEFR
Trigger: CCTGAATTCCTTTGAATTCAAATCACTTACAGACTC...ACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAACTCTGTTGGTGTTATTaGCTGCAAAGGCATGTAAGT +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKLCWCY*LQRHVS
Trigger: ACTTACATGCCTTTGCAGCAAATAACACCAACAGAG...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS TCA 90 bp TTGTTCAGCTGTTCAAGCTCCAGAACAATTGTTGCATATCTCCGCTaGAATTCAATGCTGATGGGCATGGAATATGATTTCAATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LFSCSSSRTIVAYLR*NSMLMGMEYDFNFS
Trigger: AGAAAAATTGAAATCATATTCCATGCCCATCAGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTGAACAGCTGAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS-3UTR CAA 90 bp ATGAATAAAAAGACCAGGTTTCTTCATACTCTCCATTGCAGCAGTTGTCTGCATACTTTATGCAAAACTTaGTTTAGGTCCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: MNKKTRFLHTLHCSSCLHTLCKT*FRSLFS
Trigger: GCTGAACAAGGACCTAAACAAAGTTTTGCATAAAGT...ATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAATTTACTCAGTCTCTGTaGGTGTTATTTGCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKFTQSL*VLFAAK
Trigger: CTTTGCAGCAAATAACACCAACAGAGACTGAGTAAA...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAACTTTATGCAAAACTTaGTTTAGGTCCTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKTLCKT*FRSLFS
Trigger: GCTGAACAAGGACCTAAACAAAGTTTTGCATAAAGT...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS-3UTR CAA 90 bp CTGCAGTGGCACAATACCAACAAAGAATACGGAAGCCTTTTTAAACTATACAAAGAGTCTGTAAGTGATTaGAATTCAAAGGAATTCAGG +
Preference number: 5 (lower is better)
Translates to: LQWHNTNKEYGSLFKLYKESVSD*NSKEFR
Trigger: CCTGAATTCCTTTGAATTCAAATCACTTACAGACTC...TTTGTATAGTTTAAAAAGGCTTCCGTATTCTTTGTTGGTATTGTGCCACTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS GCA 72 bp GGGCCCCGCTCCCGGCGCATGTTCCGCGGCCCGCGCTaGAGCTGCGGGAACTGCAGGCTGTTTGTTCCGAGT +
Preference number: 6 (lower is better)
Translates to: GPRSRRMFRGPR*SCGNCRLFVPS
Trigger: ACTCGGAACAAACAGCCTGCAGTTCCCGCAGCTGCAGCGCGGGCCGCGGAACATGCGCCGGGAGCGGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS GCA 72 bp GTGGGGCGGAGACTGTCTTTGCGAGGGAGGTTCGAATaGGGAGCTCGCTGCCCGCGGCGCCGCGCTGCGCTG +
Preference number: 6 (lower is better)
Translates to: VGRRLSLRGRFE*GARCPRRRAAL
Trigger: CAGCGCAGCGCGGCGCCGCGGGCAGCGAGCTCCGCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS CAA 90 bp TTCAAAGGCTGCCCGCCGCGGTGCATTGTGGGGCGGAGACTGTCTTaGCGAGGGAGGTTCGAATGCGGAGCTCGCTGCCCGCGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: FKGCPPRCIVGRRLS*RGRFECGARCPRRR
Trigger: GCGGCGCCGCGGGCAGCGAGCTCCGCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCAGCCTTTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS CAA 90 bp CGGTCCCAGCGGCCCCTCGCGATCCGGGCACGCCTTTCCCGAATGTaGGAAGCTGAGCTGCGTGCAGCCGGGGAGCGAGACCTTGAGAGG +
Preference number: 6 (lower is better)
Translates to: RSQRPLAIRARLSRM*EAELRAAGERDLER
Trigger: CCTCTCAAGGTCTCGCTCCCCGGCTGCACGCAGCTCAGCTTCCAACATTCGGGAAAGGCGTGCCCGGATCGCGAGGGGCCGCTGGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS GCA 72 bp GCCCGCCGCGGTGCATTGTGGGGCGGAGACTGTCTTTaGGAGGGAGGTTCGAATGCGGAGCTCGCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: ARRGALWGGDCL*EGGSNAELAAR
Trigger: GCGGGCAGCGAGCTCCGCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS CCA 72 bp GGCCCCTCGCGATCCGGGCACGCCTTTCCCGAATGTTaGAAGCTGAGCTGCGTGCAGCCGGGGAGCGAGACC +
Preference number: 6 (lower is better)
Translates to: GPSRSGHAFPEC*KLSCVQPGSET
Trigger: GGTCTCGCTCCCCGGCTGCACGCAGCTCAGCTTCCAACATTCGGGAAAGGCGTGCCCGGATCGCGAGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS CAA 72 bp CGGCCCCTCGCGATCCGGGCACGCCTTTCCCGAATGTaGGAAGCTGAGCTGCGTGCAGCCGGGGAGCGAGAC +
Preference number: 6 (lower is better)
Translates to: RPLAIRARLSRM*EAELRAAGERD
Trigger: GTCTCGCTCCCCGGCTGCACGCAGCTCAGCTTCCAACATTCGGGAAAGGCGTGCCCGGATCGCGAGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS CAA 72 bp TGCCCGCCGCGGTGCATTGTGGGGCGGAGACTGTCTTaGCGAGGGAGGTTCGAATGCGGAGCTCGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: CPPRCIVGRRLS*RGRFECGARCP
Trigger: CGGGCAGCGAGCTCCGCATTCGAACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS GCA 72 bp CGCATGTTCCGCGGCCCGCGCTGCAGCTGCGGGAACTaGAGGCTGTTTGTTCCGAGTGGAGAACGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: RMFRGPRCSCGN*RLFVPSGEREG
Trigger: TCCCTCCCGTTCTCCACTCGGAACAAACAGCCTGCAGTTCCCGCAGCTGCAGCGCGGGCCGCGGAACATGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS GCA 72 bp GAGCCGCGCCGCTTTTTCAAAGGCTGCCCGCCGCGGTaGATTGTGGGGCGGAGACTGTCTTTGCGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: EPRRFFKGCPPR*IVGRRLSLRGR
Trigger: CCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS CAA 72 bp CGCGCCGCTTTTTCAAAGGCTGCCCGCCGCGGTGCATaGTGGGGCGGAGACTGTCTTTGCGAGGGAGGTTCG +
Preference number: 6 (lower is better)
Translates to: RAAFSKAARRGA*WGGDCLCEGGS
Trigger: CGAACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS CCA 72 bp CACAGGCTGGACTCCCGGGCTCTCGGTTTCCGGCCCTaGCGCTCACACAACCCCAGAAACCAACACACAGAC +
Preference number: 6 (lower is better)
Translates to: HRLDSRALGFRP*RSHNPRNQHTD
Trigger: GTCTGTGTGTTGGTTTCTGGGGTTGTGTGAGCGCCAGGGCCGGAAACCGAGAGCCCGGGAGTCCAGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359525.2
CDS CAA 90 bp TTTGCTGAAGAGCTCTCGTCAGGCAACTGGTCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTTTTCAAAGGCTGCCCGCCGCGGTGC +
Preference number: 6 (lower is better)
Translates to: FAEELSSGNWSSSAI*NEPRRFFKGCPPRC
Trigger: GCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS TCA 72 bp AGCTCTCGTCAGGCAACTGGTCGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTTTCAAAGGCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: SSRQATGRAPPS*TSRAAFSKAAR
Trigger: GCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS GCA 72 bp TCCGGGCACGCCTTTCCCGAATGTTGGAAGCTGAGCTaGGTGCAGCCGGGGAGCGAGACCTTGAGAGGTCAT +
Preference number: 6 (lower is better)
Translates to: SGHAFPECWKLS*VQPGSETLRGH
Trigger: ATGACCTCTCAAGGTCTCGCTCCCCGGCTGCACGCAGCTCAGCTTCCAACATTCGGGAAAGGCGTGCCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS CAA 72 bp GAGCTCTCGTCAGGCAACTGGTCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTTTTCAAAGGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: ELSSGNWSSSAI*NEPRRFFKGCP
Trigger: CGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS CCA 72 bp GCCGCTTTTTCAAAGGCTGCCCGCCGCGGTGCATTGTaGGGCGGAGACTGTCTTTGCGAGGGAGGTTCGAAT +
Preference number: 6 (lower is better)
Translates to: AAFSKAARRGAL*GGDCLCEGGSN
Trigger: ATTCGAACCTCCCTCGCAAAGACAGTCTCCGCCCCACAATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328205.9
ENST00000481685.1
CDS CCA 72 bp ACAAGGGCTTTTGCTGAAGAGCTCTCGTCAGGCAACTaGTCGAGCTCCGCCATCTTGAACGAGCCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: TRAFAEELSSGN*SSSAILNEPRR
Trigger: GCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS TCA 72 bp GCTTCTTCCTCACACCTGCGTCTCATATCTGTTGGCTaGTCTGCAGGCTGGAGCCCCTGGTCTGGAGCAAGC +
Preference number: 6 (lower is better)
Translates to: ASSSHLRLISVG*SAGWSPWSGAS
Trigger: GCTTGCTCCAGACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CCA 72 bp AGTGAAATACTCACAGTTCCCGAAACCCACGTTGCTTaGGCGCCTCCGTCCCCTCACTTTTCCCGAGACCGC +
Preference number: 6 (lower is better)
Translates to: SEILTVPETHVA*APPSPHFSRDR
Trigger: GCGGTCTCGGGAAAAGTGAGGGGACGGAGGCGCCCAAGCAACGTGGGTTTCGGGAACTGTGAGTATTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS CCA 72 bp CTGTGCTTCTTCCTCACACCTGCGTCTCATATCTGTTaGCTGATCTGCAGGCTGGAGCCCCTGGTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LCFFLTPASHIC*LICRLEPLVWS
Trigger: GCTCCAGACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 72 bp CCTGTGCTTCTTCCTCACACCTGCGTCTCATATCTGTaGGCTGATCTGCAGGCTGGAGCCCCTGGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: PVLLPHTCVSYL*ADLQAGAPGLE
Trigger: CTCCAGACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 72 bp TGGAAGCTGAGCTGCGTGCAGCCGGGGAGCGAGACCTaGAGAGGTCATGAAGTTGGTCATTTAGGCCGACAG +
Preference number: 6 (lower is better)
Translates to: WKLSCVQPGSET*RGHEVGHLGRQ
Trigger: CTGTCGGCCTAAATGACCAACTTCATGACCTCTCAAGGTCTCGCTCCCCGGCTGCACGCAGCTCAGCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS CAA 72 bp CGCAAAGTGAAATACTCACAGTTCCCGAAACCCACGTaGCTTGGGCGCCTCCGTCCCCTCACTTTTCCCGAG +
Preference number: 6 (lower is better)
Translates to: RKVKYSQFPKPT*LGRLRPLTFPE
Trigger: CTCGGGAAAAGTGAGGGGACGGAGGCGCCCAAGCAACGTGGGTTTCGGGAACTGTGAGTATTTCACTTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS CAA 90 bp CCCGAATGTTGGAAGCTGAGCTGCGTGCAGCCGGGGAGCGAGACCTaGAGAGGTCATGAAGTTGGTCATTTAGGCCGACAGCTAAAGAAC +
Preference number: 6 (lower is better)
Translates to: PECWKLSCVQPGSET*RGHEVGHLGRQLKN
Trigger: GTTCTTTAGCTGTCGGCCTAAATGACCAACTTCATGACCTCTCAAGGTCTCGCTCCCCGGCTGCACGCAGCTCAGCTTCCAACATTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS TCA 72 bp TCTGGGTCGCATTGCCCGAGGGGGCTCTACGCAAAGTaGAATACTCACAGTTCCCGAAACCCACGTTGCTTG +
Preference number: 6 (lower is better)
Translates to: SGSHCPRGLYAK*NTHSSRNPRCL
Trigger: CAAGCAACGTGGGTTTCGGGAACTGTGAGTATTTCACTTTGCGTAGAGCCCCCTCGGGCAATGCGACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328205.9
CDS TCA 72 bp CTGCGTGCAGCCGGGGAGCGAGACCTTGAGAGGTCATaGAGTTGGTCATTTAGGCCGACAGCTAAAGAACTG +
Preference number: 6 (lower is better)
Translates to: LRAAGERDLERS*SWSFRPTAKEL
Trigger: CAGTTCTTTAGCTGTCGGCCTAAATGACCAACTTCATGACCTCTCAAGGTCTCGCTCCCCGGCTGCACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366808.6
CDS GCA 72 bp TTCCTCACACCTGCGTCTCATATCTGTTGGCTGATCTaGAGGCTGGAGCCCCTGGTCTGGAGCAAGCTCATA +
Preference number: 6 (lower is better)
Translates to: FLTPASHICWLI*RLEPLVWSKLI
Trigger: TATGAGCTTGCTCCAGACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAGACGCAGGTGTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 90 bp GAACAATTTCCTGTGCTTCTTCCTCACACCTGCGTCTCATATCTGTaGGCTGATCTGCAGGCTGGAGCCCCTGGTCTGGAGCAAGCTCAT +
Preference number: 6 (lower is better)
Translates to: EQFPVLLPHTCVSYL*ADLQAGAPGLEQAH
Trigger: ATGAGCTTGCTCCAGACCAGGGGCTCCAGCCTGCAGATCAGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAGCACAGGAAATTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS GCA 72 bp TTTTCAACGCAGGGCTGTCCTGTTGAGGAATTTGCATaGCGAACAATTTCCTGTGCTTCTTCCTCACACCTG +
Preference number: 6 (lower is better)
Translates to: FSTQGCPVEEFA*RTISCASSSHL
Trigger: CAGGTGTGAGGAAGAAGCACAGGAAATTGTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCGTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 90 bp CTGTCAGATTTTCATTTTCAACGCAGGGCTGTCCTGTTGAGGAATTaGCATGCCGAACAATTTCCTGTGCTTCTTCCTCACACCTGCGTC +
Preference number: 6 (lower is better)
Translates to: LSDFHFQRRAVLLRN*HAEQFPVLLPHTCV
Trigger: GACGCAGGTGTGAGGAAGAAGCACAGGAAATTGTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAAATCTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 72 bp TTTCATTTTCAACGCAGGGCTGTCCTGTTGAGGAATTaGCATGCCGAACAATTTCCTGTGCTTCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: FHFQRRAVLLRN*HAEQFPVLLPH
Trigger: GTGAGGAAGAAGCACAGGAAATTGTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS TCA 72 bp TGTCAGATTTTCATTTTCAACGCAGGGCTGTCCTGTTaGGGAATTTGCATGCCGAACAATTTCCTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: CQIFIFNAGLSC*GICMPNNFLCF
Trigger: GAAGCACAGGAAATTGTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAAATCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS GCA 72 bp GTCCTTGTTCAGCTGTTCAAGCTCCAGAACAATTGTTaGATATCTCCGCTGAAATTCAATGCTGATGGGCAT +
Preference number: 6 (lower is better)
Translates to: VLVQLFKLQNNC*ISPLKFNADGH
Trigger: ATGCCCATCAGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTGAACAGCTGAACAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 72 bp CTGTCAGATTTTCATTTTCAACGCAGGGCTGTCCTGTaGAGGAATTTGCATGCCGAACAATTTCCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: LSDFHFQRRAVL*RNLHAEQFPVL
Trigger: AAGCACAGGAAATTGTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAAATCTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 90 bp GCAGTTGGAATAATGAAATCTTTACTCAGTCTCTGTTGGTGTTATTaGCTGCAAAGGCATGTAAGTTTCCCATCTGGCTCAGGCCACTCT +
Preference number: 6 (lower is better)
Translates to: AVGIMKSLLSLCWCY*LQRHVSFPSGSGHS
Trigger: AGAGTGGCCTGAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAGAGACTGAGTAAAGATTTCATTATTCCAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS CAA 90 bp AAATTAAGTCTGTCAGATTTTCATTTTCAACGCAGGGCTGTCCTGTaGAGGAATTTGCATGCCGAACAATTTCCTGTGCTTCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: KLSLSDFHFQRRAVL*RNLHAEQFPVLLPH
Trigger: GTGAGGAAGAAGCACAGGAAATTGTTCGGCATGCAAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAAATCTGACAGACTTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 90 bp AATGTCCCGTGCAGTTGGAATAATGAAATCTTTACTCAGTCTCTGTaGGTGTTATTTGCTGCAAAGGCATGTAAGTTTCCCATCTGGCTC +
Preference number: 6 (lower is better)
Translates to: NVPCSWNNEIFTQSL*VLFAAKACKFPIWL
Trigger: GAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAGAGACTGAGTAAAGATTTCATTATTCCAACTGCACGGGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS TCA 72 bp TGTTCAAGCTCCAGAACAATTGTTGCATATCTCCGCTaGAATTCAATGCTGATGGGCATGGAATATGATTTC +
Preference number: 6 (lower is better)
Translates to: CSSSRTIVAYLR*NSMLMGMEYDF
Trigger: GAAATCATATTCCATGCCCATCAGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 90 bp TTCGTTCCAATAACCAGAGGCAAAGGAATTTCATCTGGGAGATCTTaGAATTGTGAAACATCTGCAACTTTCCTTTGTTGTAAGAGCCTT +
Preference number: 6 (lower is better)
Translates to: FVPITRGKGISSGRS*NCETSATFLCCKSL
Trigger: AAGGCTCTTACAACAAAGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTGGTTATTGGAACGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 72 bp ATAATGAAATCTTTACTCAGTCTCTGTTGGTGTTATTaGCTGCAAAGGCATGTAAGTTTCCCATCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: IMKSLLSLCWCY*LQRHVSFPSGS
Trigger: TGAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAGAGACTGAGTAAAGATTTCATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000681046.1
CDS CAA 72 bp CACTCGTATATACACCATTTATGTGCTTTAGGAAGCTaGAGCAGATTACGTAATCGAAAACCAATCTTCTGT +
Preference number: 6 (lower is better)
Translates to: HSYIHHLCALGS*SRLRNRKPIFC
Trigger: ACAGAAGATTGGTTTTCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACATAAATGGTGTATATACGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 72 bp ATAACCAGAGGCAAAGGAATTTCATCTGGGAGATCTTaGAATTGTGAAACATCTGCAACTTTCCTTTGTTGT +
Preference number: 6 (lower is better)
Translates to: ITRGKGISSGRS*NCETSATFLCC
Trigger: ACAACAAAGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTGGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1
CDS CAA 90 bp GCGTCTATTGTACTCTTGATATCATTTAATGAGTCTGTAAGTGATTaGAATTCAAAGGAATTCAGGTCTCCTCCTTCTGCTAGACACTTA +
Preference number: 6 (lower is better)
Translates to: ASIVLLISFNESVSD*NSKEFRSPPSARHL
Trigger: TAAGTGTCTAGCAGAAGGAGGAGACCTGAATTCCTTTGAATTCAAATCACTTACAGACTCATTAAATGATATCAAGAGTACAATAGACGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328205.9
ENST00000366808.6
ENST00000460719.5
ENST00000481685.1
ENST00000681046.1