Pregenerated sensors for LIN7C (Homo sapiens)
Ensembl gene IDs: ENSG00000148943Ensembl transcript IDs: ENST00000278193.7, ENST00000524596.1
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTaGGCTACCCTTATTTTAAGAATTATAAATAGGTGTCAACCCACA | + |
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Preference number: 1 (lower is better) Translates to: FMLNSSKLNYCTWLL*ATLILRIINRCQPT Trigger: TGTGGGTTGACACCTATTTATAATTCTTAAAATAAGGGTAGCTCAAAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTAAACTTGCACTGTACTaGGTCATGATTTACCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLKLALY*VMIYHW Trigger: CCAGTGGTAAATCATGACTCAGTACAGTGCAAGTTT...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR CCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTCCACCACCAAATAACTaGTTTGTCTCTAGGAATGGA | + |
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Preference number: 2 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLPPPNN*FVSRNG Trigger: TCCATTCCTAGAGACAAACCAGTTATTTGGTGGTGG...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR GCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTAGACACATTCAACCATaGAATCCAGTGTTCAATACC | + |
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Preference number: 2 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLRHIQP*NPVFNT Trigger: GGTATTGAACACTGGATTGCATGGTTGAATGTGTCT...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTCACTGTACTGAGTCATaGTTTACCACTGGTTATATA | + |
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Preference number: 2 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLHCTES*FTTGYI Trigger: TATATAACCAGTGGTAAATCATGACTCAGTACAGTG...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGAGTTGTAACAGAAAATaGACCCCAACTCTTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWSCNRK*TPTLSV Trigger: GACTGAAAGAGTTGGGGTTCATTTTCTGTTACAACT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR TCA 72 bp | AGGCTGAGGTGGAAGCCAAGGAGTTTCAGGCTGCAGTaGGCTATGATCACACCACTGTGTTCCAGCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: RLRWKPRSFRLQ*AMITPLCSSLG Trigger: TCCCAGGCTGGAACACAGTGGTGTGATCATAGCTCACTGCAGCCTGAAACTCCTTGGCTTCCACCTCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTAACAGTAGGACAGAATaGCCCTCATCACCTTTTACT | + |
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Preference number: 3 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLNSRTE*PSSPFT Trigger: AGTAAAAGGTGATGAGGGCAATTCTGTCCTACTGTT...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTCACCAAATAACTGGTTaGTCTCTAGGAATGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLHQITG*SLGMEG Trigger: TCCTTCCATTCCTAGAGACAAACCAGTTATTTGGTG...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCACCAAATAACTGGTTaGTCTCTAGGAATGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWHQITG*SLGMEG Trigger: TCCTTCCATTCCTAGAGACAAACCAGTTATTTGGTG...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCACACAAAGAACAGATaGTGGATTACCGTAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWHTKNR*WITVGK Trigger: TTTCCCTACGGTAATCCACAATCTGTTCTTTGTGTG...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTTACAATCATTGGCATaGCAGCCATTAGTAAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWLQSLA*QPLVSH Trigger: GTGACTTACTAATGGCTGCAATGCCAATGATTGTAA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR TCA 72 bp | AACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTaGGCTACCCTTATTTTAAGAATTATAAATAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: NSSKLNYCTWLL*ATLILRIINRC Trigger: ACACCTATTTATAATTCTTAAAATAAGGGTAGCTCAAAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTGGCGGAGGCTGAAGTaGGCCGAGATCACACCACTG | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLWRRLK*AEITPL Trigger: CAGTGGTGTGATCTCGGCTCACTTCAGCCTCCGCCA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGGGCAGGAGAATTGCTTaGACTGCCTTGAGGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWGRRIA*TALRWR Trigger: CCGCCACCTCAAGGCAGTTCAAGCAATTCTCCTGCC...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTGTTGATCTCCACGTTTaGGGCCCCCATGTCTATCAG | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLVDLHV*GPHVYQ Trigger: CTGATAGACATGGGGGCCTCAAACGTGGAGATCAAC...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTAATGCTTTGGGAGGCTaGGGTGGAAGCCAAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLNALGG*GGSQGV Trigger: AACTCCTTGGCTTCCACCTCAGCCTCCCAAAGCATT...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTTTGGGAGGCTGAGGTaGAAGCCAAGGAGTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLFGRLR*KPRSFR Trigger: CCTGAAACTCCTTGGCTTCCACCTCAGCCTCCCAAA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGGTTGATCTCCACGTTTaGGGCCCCCATGTCTATCAG | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWVDLHV*GPHVYQ Trigger: CTGATAGACATGGGGGCCTCAAACGTGGAGATCAAC...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGAATGCTTTGGGAGGCTaGGGTGGAAGCCAAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWNALGG*GGSQGV Trigger: AACTCCTTGGCTTCCACCTCAGCCTCCCAAAGCATT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR GCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTCTGAGGCAGGAGAATTaGTTGAACTGCCTTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLLRQEN*LNCLEV Trigger: CACCTCAAGGCAGTTCAAGCAATTCTCCTGCCTCAG...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTTTGGGAGGCTGAGGTaGAAGCCAAGGAGTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWFGRLR*KPRSFR Trigger: CCTGAAACTCCTTGGCTTCCACCTCAGCCTCCCAAA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTTAACAGAGAGGAGTTaGTCTCCACGTTTGAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWLTERS*SPRLRP Trigger: GGGCCTCAAACGTGGAGATCAACTCCTCTCTGTTAA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR GCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGAGCAACAGTAGCCTTTaGAGTAGCGTTCGCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWSNSSL*SSVRSH Trigger: GTGAGAGCGAACGCTACTGCAAAGGCTACTGTTGCT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278193.7 |
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| CDS-3UTR GCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTTCACTGGCAGCAAATaGAGCAACAGTAGCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLFTGSK*SNSSLC Trigger: GCAAAGGCTACTGTTGCTGCATTTGCTGCCAGTGAA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278193.7 |
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| CDS-3UTR GCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTGAGGCAGGAGAATTaGTTGAACTGCCTTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWLRQEN*LNCLEV Trigger: CACCTCAAGGCAGTTCAAGCAATTCTCCTGCCTCAG...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCACTGTGTTCCAGCCTaGGAGACAAAGCAAGATCCT | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWHCVPA*ETKQDP Trigger: AGGATCTTGCTTTGTCTCCCAGGCTGGAACACAGTG...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTACTCTTTGCAAAGCCTaGAGTTTCTGTGGTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLTLCKA*SFCGGT Trigger: AGTACCACCACAGAAACTTCAGGCTTTGCAAAGAGT...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTTCAGGACTGCTACTaGTGTCCACAGTCTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWLQDCY*CPQSHR Trigger: TCTATGAGACTGTGGACATCAGTAGCAGTCCTGAAG...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278193.7 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTCAACAACTCGAGGATaGGAATGTCCTTCACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWSTTRG*ECPSLA Trigger: TGCCAGTGAAGGACATTCTCATCCTCGAGTTGTTGA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR GCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTCCATCATTTCCTCACTaGACTAAACCACCACTGTAC | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLPSFPH*TKPPLY Trigger: GTACAGTGGTGGTTTAGTGCAGTGAGGAAATGATGG...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR GCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTTCACTGGCAGCAAATaGAGCAACAGTAGCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWFTGSK*SNSSLS Trigger: AGAGAGGCTACTGTTGCTGCATTTGCTGCCAGTGAA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524596.1 |
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| CDS-3UTR CCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTCTGAAGTTTCTGTGGTaGTACTTCTCCACTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLLKFLW*YFSTPL Trigger: CAAAGGAGTGGAGAAGTACCACCACAGAAACTTCAG...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGAGCCTGAAGTTTCTGTaGTGGTACTTCTCCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWSLKFL*WYFSTP Trigger: AGGAGTGGAGAAGTACCACCACAGAAACTTCAGGCT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGATAATCCTAATGCTTTaGGAGGCTGAGGTGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWIILML*EAEVEA Trigger: GGCTTCCACCTCAGCCTCCCAAAGCATTAGGATTAT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGACTCTTTGCAAAGCCTaGAGTTTCTGTGGTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWTLCKA*SFCGGT Trigger: AGTACCACCACAGAAACTTCAGGCTTTGCAAAGAGT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTTGCAGAATTCACTTTaGAGGACTCTTTGCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLLQNSL*RTLCKA Trigger: GGCTTTGCAAAGAGTCCTTCAAAGTGAATTCTGCAA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTACACCAGGTCATGCTaGCATTCTTTTTGGATAAGC | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLYTRSC*HSFWIS Trigger: GCTTATCCAAAAAGAATGTCAGCATGACCTGGTGTA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR GCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTCCTCTCTCACAGCATTaGAGAATTCACTTTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLPLSQH*RIHFEG Trigger: TCCTTCAAAGTGAATTCTGCAATGCTGTGAGAGAGG...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR GCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTTTAACCTTTCCTTGTaGGGCTTTCAGCAGTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLFNLSL*GFQQFY Trigger: GTAGAACTGCTGAAAGCCGCACAAGGAAAGGTTAAA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTGAAGTTTCTGTGGTaGTACTTCTCCACTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWLKFLW*YFSTPL Trigger: CAAAGGAGTGGAGAAGTACCACCACAGAAACTTCAG...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR CAA 72 bp | TTTGCTTCAGCTACTTCCCACCACCAAATAACTGGTTaGTCTCTAGGAATGGAAGGACTAAAATATAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FASATSHHQITG*SLGMEGLKYRG Trigger: TCCCCTATATTTTAGTCCTTCCATTCCTAGAGACAAACCAGTTATTTGGTGGTGGGAAGTAGCTGAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTTGCAGAATTCACTTTaGAGGACTCTTTGCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWLQNSL*RTLCKA Trigger: GGCTTTGCAAAGAGTCCTTCAAAGTGAATTCTGCAA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGAAACTTGCACTGTACTaGGTCATGATTTACCACTGG | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWKLALY*VMIYHW Trigger: CCAGTGGTAAATCATGACTCAGTACAGTGCAAGTTT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTGTACTTGGCTCCTTTaGGCTACCCTTATTTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLCTWLL*ATLILR Trigger: TCTTAAAATAAGGGTAGCTCAAAGGAGCCAAGTACA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTGTACTTGGCTCCTTTaGGCTACCCTTATTTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWCTWLL*ATLILR Trigger: TCTTAAAATAAGGGTAGCTCAAAGGAGCCAAGTACA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTGTAAACAAAGTACTTaGGCCAGACTACTTAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLCKQST*ARLLKY Trigger: GTACTTAAGTAGTCTGGCTCAAGTACTTTGTTTACA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR TCA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTACCTGGAATAACCTTTaGAGAAACACTACTAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLTWNNL*RNTTSK Trigger: TTTGCTAGTAGTGTTTCTTCAAAGGTTATTCCAGGT...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278193.7 |
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| CDS-3UTR GCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGATTAGGTCTGTTGCCTaGGTTTTGCTGATCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWIRSVA*VLLISF Trigger: AAATGAGATCAGCAAAACGCAGGCAACAGACCTAAT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR GCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGAGACACATTCAACCATaGAATCCAGTGTTCAATACC | + |
|
Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWRHIQP*NPVFNT Trigger: GGTATTGAACACTGGATTGCATGGTTGAATGTGTCT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTTTCTTCTAAGACTTTaGGTGTGTATCGTACCACTA | + |
|
Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWFLLRL*VCIVPL Trigger: TAGTGGTACGATACACACCCAAAGTCTTAGAAGAAA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| 3UTR CAA 72 bp | CATTTCCTCACTGCACTAAACCACCACTGTACATCTTaGCCAATGAATGACTGTATTTTTCTATGGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFLTALNHHCTS*PMNDCIFLWSR Trigger: TCTTGACCATAGAAAAATACAGTCATTCATTGGCAAAGATGTACAGTGGTGGTTTAGTGCAGTGAGGAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR GCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGATGAAAACAACCTACTaGTATTCATGCTCAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWMKTTY*YSCSTV Trigger: TACTGTTGAGCATGAATAGCAGTAGGTTGTTTTCAT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR GCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTTCCCAAATAAGGAATaGCAAGTACCTTTTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWFPNKE*QVPFIP Trigger: AGGAATAAAAGGTACTTGGCATTCCTTATTTGGGAA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CCA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGATCAGCAATTCCACCTaGAATTATTCGGGATATATA | + |
|
Preference number: 4 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWISNST*NYSGYI Trigger: TATATATCCCGAATAATTCCAGGTGGAATTGCTGAT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS TCA 90 bp | AATCCAAGGCCCTCTTCTGTTTTTGGTAGCTCAACAACTCGAGGATaGGAATGTCCTTCACTGGCAGCAAATGCAGCAACAGTAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NPRPSSVFGSSTTRG*ECPSLAANAATVAS Trigger: AGAGGCTACTGTTGCTGCATTTGCTGCCAGTGAAGGACATTCTCATCCTCGAGTTGTTGAGCTACCAAAAACAGAAGAGGGCCTTGGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524596.1 |
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| CDS TCA 90 bp | AATCCAAGGCCCTCTTCTGTTTTTGGTAGCTCAACAACTCGAGGATaGGAATGTCCTTCACTGGCAGCAAATGCAGCAACAGTAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NPRPSSVFGSSTTRG*ECPSLAANAATVAF Trigger: AAAGGCTACTGTTGCTGCATTTGCTGCCAGTGAAGGACATTCTCATCCTCGAGTTGTTGAGCTACCAAAAACAGAAGAGGGCCTTGGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278193.7 |
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| CDS-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTGGCCCTCTTCTGTTTTaGGTAGCTCAACAACTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLGPLLF*VAQQLE Trigger: CTCGAGTTGTTGAGCTACCAAAAACAGAAGAGGGCC...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGGGCCCTCTTCTGTTTTaGGTAGCTCAACAACTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWGPLLF*VAQQLE Trigger: CTCGAGTTGTTGAGCTACCAAAAACAGAAGAGGGCC...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTATTAACAGAGAGGAGTaGATCTCCACGTTTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLINREE*ISTFEA Trigger: GGCCTCAAACGTGGAGATCAACTCCTCTCTGTTAAT...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTGCTAAACTACTGTACTaGGCTCCTTTGAGCTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLAKLLY*APLSYP Trigger: AGGGTAGCTCAAAGGAGCCAAGTACAGTAGTTTAGC...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS CCA 90 bp | TTGATCTCCACGTTTGAGGCCCCCATGTCTATCAGCAATTCCACCTaGAATTATTCGGGATATATAGATTGGAGAGTTTTGTTCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LISTFEAPMSISNST*NYSGYIDWRVLFFA Trigger: GGCAAAGAACAAAACTCTCCAATCTATATATCCCGAATAATTCCAGGTGGAATTGCTGATAGACATGGGGGCCTCAAACGTGGAGATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTTGCCTCCCATAATATaGAATCCAAGGCCCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLLPPII*NPRPSS Trigger: AGAAGAGGGCCTTGGATTCAATATTATGGGAGGCAA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGATTAACAGAGAGGAGTaGATCTCCACGTTTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWINREE*ISTFEA Trigger: GGCCTCAAACGTGGAGATCAACTCCTCTCTGTTAAT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGGCTAAACTACTGTACTaGGCTCCTTTGAGCTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWAKLLY*APLSYP Trigger: AGGGTAGCTCAAAGGAGCCAAGTACAGTAGTTTAGC...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTACTTTGAAGGACTCTTaGCAAAGCCTGAAGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLTLKDS*QSLKFL Trigger: CAGAAACTTCAGGCTTTGCAAAGAGTCCTTCAAAGT...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTCACACAAAGAACAGATaGTGGATTACCGTAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLHTKNR*WITVGK Trigger: TTTCCCTACGGTAATCCACAATCTGTTCTTTGTGTG...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGACTTTGAAGGACTCTTaGCAAAGCCTGAAGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWTLKDS*QSLKFL Trigger: CAGAAACTTCAGGCTTTGCAAAGAGTCCTTCAAAGT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTTACAATCATTGGCATaGCAGCCATTAGTAAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLLQSLA*QPLVSH Trigger: GTGACTTACTAATGGCTGCAATGCCAATGATTGTAA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGAACAGTAGGACAGAATaGCCCTCATCACCTTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWNSRTE*PSSPFT Trigger: AGTAAAAGGTGATGAGGGCAATTCTGTCCTACTGTT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTGGAGAGTTTTGTTCTTaGCCTCCCATAATATTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLGEFCS*PPIILN Trigger: ATTCAATATTATGGGAGGCAAAGAACAAAACTCTCC...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | CTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCTCCTTTTCGGGATATATAGATaGGAGAGTTTTGTTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFMLNSSKLNYCTWLLFGIYR*ESFVLC Trigger: GCAAAGAACAAAACTCTCCAATCTATATATCCCGAA...AAGGAGCCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGATTTCTTCTAAGACTTaGGGTGTGTATCGTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWISSKT*GVYRTT Trigger: AGTGGTACGATACACACCCAAAGTCTTAGAAGAAAT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGCACCACTGTACATCTTaGCCAATGAATGACTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWHHCTS*PMNDCI Trigger: AATACAGTCATTCATTGGCAAAGATGTACAGTGGTG...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS CCA 90 bp | ATGTCTATCAGCAATTCCACCTGGAATTATTCGGGATATATAGATTaGAGAGTTTTGTTCTTTGCCTCCCATAATATTGAATCCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MSISNSTWNYSGYID*RVLFFASHNIESKA Trigger: GGCCTTGGATTCAATATTATGGGAGGCAAAGAACAAAACTCTCCAATCTATATATCCCGAATAATTCCAGGTGGAATTGCTGATAGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGTTCGGGATATATAGATaGGAGAGTTTTGTTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWFGIYR*ESFVLC Trigger: GCAAAGAACAAAACTCTCCAATCTATATATCCCGAA...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS-3UTR CAA 90 bp | AACAACCTACTGCTATTCATGCTCAACAGTAGCAAGCTAAACTACTGTACTTGGAATTATAAAACCAGATaGTTGGCAGAGGACACAACA | + |
|
Preference number: 5 (lower is better) Translates to: NNLLLFMLNSSKLNYCTWNYKTR*LAEDTT Trigger: TGTTGTGTCCTCTGCCAACAATCTGGTTTTATAATT...CCAAGTACAGTAGTTTAGCTTGCTACTGTTGAGCATGAATAGCAGTAGGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278193.7 |
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| CDS GCA 72 bp | AACTCGAGGATGAGAATGTCCTTCACTGGCAGCAAATaGAGCAACAGTAGCCTTTGCAGTAGCGTTCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSRMRMSFTGSK*SNSSLCSSVRS Trigger: AGAGCGAACGCTACTGCAAAGGCTACTGTTGCTGCATTTGCTGCCAGTGAAGGACATTCTCATCCTCGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278193.7 |
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| CDS TCA 72 bp | TCTCCTTCAACACTCACTCCATTAACAGAGAGGAGTTaGTCTCCACGTTTGAGGCCCCCATGTCTATCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPSTLTPLTERS*SPRLRPPCLSA Trigger: TGCTGATAGACATGGGGGCCTCAAACGTGGAGATCAACTCCTCTCTGTTAATGGAGTGAGTGTTGAAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS CAA 72 bp | TTCTCCTTCAACACTCACTCCATTAACAGAGAGGAGTaGATCTCCACGTTTGAGGCCCCCATGTCTATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSFNTHSINREE*ISTFEAPMSIS Trigger: GCTGATAGACATGGGGGCCTCAAACGTGGAGATCAACTCCTCTCTGTTAATGGAGTGAGTGTTGAAGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS TCA 72 bp | CCCTCTTCTGTTTTTGGTAGCTCAACAACTCGAGGATaGGAATGTCCTTCACTGGCAGCAAATGCAGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: PSSVFGSSTTRG*ECPSLAANAAT Trigger: TGTTGCTGCATTTGCTGCCAGTGAAGGACATTCTCATCCTCGAGTTGTTGAGCTACCAAAAACAGAAGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS CAA 90 bp | AGTAGCCTCTCTCACAGCATTGCAGAATTCACTTTGAAGGACTCTTaGCAAAGCCTGAAGTTTCTGTGGTGGTACTTCTCCACTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLSHSIAEFTLKDS*QSLKFLWWYFSTPL Trigger: CAAAGGAGTGGAGAAGTACCACCACAGAAACTTCAGGCTTTGCAAAGAGTCCTTCAAAGTGAATTCTGCAATGCTGTGAGAGAGGCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524596.1 |
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| CDS CAA 90 bp | AAATGCAGCAACAGTAGCCTCTCTCACAGCATTGCAGAATTCACTTaGAAGGACTCTTTGCAAAGCCTGAAGTTTCTGTGGTGGTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: KCSNSSLSHSIAEFT*KDSLQSLKFLWWYF Trigger: GAAGTACCACCACAGAAACTTCAGGCTTTGCAAAGAGTCCTTCAAAGTGAATTCTGCAATGCTGTGAGAGAGGCTACTGTTGCTGCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524596.1 |
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| CDS CAA 90 bp | ATATACCTCTCTCACAGCATTGCAGAATTCACTTTGAAGGACTCTTaGCAAAGCCTGAAGTTTCTGTGGTGGTACTTCTCCACTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IYLSHSIAEFTLKDS*QSLKFLWWYFSTPL Trigger: CAAAGGAGTGGAGAAGTACCACCACAGAAACTTCAGGCTTTGCAAAGAGTCCTTCAAAGTGAATTCTGCAATGCTGTGAGAGAGGTATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278193.7 |
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| CDS CCA 72 bp | ACGTTTGAGGCCCCCATGTCTATCAGCAATTCCACCTaGAATTATTCGGGATATATAGATTGGAGAGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TFEAPMSISNST*NYSGYIDWRVL Trigger: CAAAACTCTCCAATCTATATATCCCGAATAATTCCAGGTGGAATTGCTGATAGACATGGGGGCCTCAAACGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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| CDS CAA 90 bp | ATAGACATGTTCATATACCTCTCTCACAGCATTGCAGAATTCACTTaGAAGGACTCTTTGCAAAGCCTGAAGTTTCTGTGGTGGTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: IDMFIYLSHSIAEFT*KDSLQSLKFLWWYF Trigger: GAAGTACCACCACAGAAACTTCAGGCTTTGCAAAGAGTCCTTCAAAGTGAATTCTGCAATGCTGTGAGAGAGGTATATGAACATGTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278193.7 |
||
| CDS GCA 72 bp | TCTCATAGACATGTTCATATACCTCTCTCACAGCATTaGAGAATTCACTTTGAAGGACTCTTTGCAAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SHRHVHIPLSQH*RIHFEGLFAKP Trigger: AGGCTTTGCAAAGAGTCCTTCAAAGTGAATTCTGCAATGCTGTGAGAGAGGTATATGAACATGTCTATGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278193.7 |
||
| CDS CCA 72 bp | AGCAATTCCACCTGGAATTATTCGGGATATATAGATTaGAGAGTTTTGTTCTTTGCCTCCCATAATATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SNSTWNYSGYID*RVLFFASHNIE Trigger: TTCAATATTATGGGAGGCAAAGAACAAAACTCTCCAATCTATATATCCCGAATAATTCCAGGTGGAATTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278193.7 ENST00000524596.1 |
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