RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LIN37 (Homo sapiens)

Ensembl gene IDs: ENSG00000267796

Ensembl transcript IDs: ENST00000301159.14, ENST00000587108.5, ENST00000587751.1, ENST00000590706.6, ENST00000590890.1, ENST00000591076.1, ENST00000591163.1, ENST00000592871.1, ENST00000595455.1

Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTGCCCTGCATCTCAGGCTGCAGTGGAGATGGGATGCGGGATCTaGAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCT +
Preference number: 1 (lower is better)
Translates to: GCPASQAAVEMGCGI*RHLRVAPGVWVAAA
Trigger: AGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACTGCAGCCTGAGATGCAGGGCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 90 bp CCTTTGAGCCTATCCACCCACTGCCCTGGCACCAGGCTGCTGGGCTaGGACCCACTACCCATCCCACCTCCTCATCCTCAGGCAGCGGGG +
Preference number: 1 (lower is better)
Translates to: PLSLSTHCPGTRLLG*DPLPIPPPHPQAAG
Trigger: CCCCGCTGCCTGAGGATGAGGAGGTGGGATGGGTAGTGGGTCCCAGCCCAGCAGCCTGGTGCCAGGGCAGTGGGTGGATAGGCTCAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 90 bp GGGGTGAGCTGGGAGAGCATTCACGCTCGCGCACAGAGGGGCTGTTaGGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGC +
Preference number: 1 (lower is better)
Translates to: GVSWESIHARAQRGC*ASRRGRLGTVACSR
Trigger: GCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGTGAATGCTCTCCCAGCTCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 90 bp AGGCTGCAGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTaGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACACATCACGACT +
Preference number: 1 (lower is better)
Translates to: RLQWRWDAGSAGISG*PRGCGWRQLVHITT
Trigger: AGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACTGCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 90 bp ACGCTCGCGCACAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGATTaGGTACAGTGGCGTGTTCTCGCTGAACTGGGCCAAGTCCACGCT +
Preference number: 1 (lower is better)
Translates to: TLAHRGAVAHPGAAD*VQWRVLAELGQVHA
Trigger: AGCGTGGACTTGGCCCAGTTCAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 90 bp TCAGCCAGCCCATCATCCATCTCCCTCCTCTTCTTCCTCCGCTGGTaGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGAGGGAGTGTCAG +
Preference number: 1 (lower is better)
Translates to: SASPSSISLLFFLRW*GKRADGLRRERECQ
Trigger: CTGACACTCCCTCTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAGGGAGATGGATGATGGGCTGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 90 bp CACAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTaGCGTGTTCTCGCTGAACTGGGCCAAGTCCACGCTCCGGTCGAA +
Preference number: 1 (lower is better)
Translates to: HRGAVAHPGAADWVQ*RVLAELGQVHAPVE
Trigger: TTCGACCGGAGCGTGGACTTGGCCCAGTTCAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 90 bp GATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTaGCGGCAGCTTGTACACATCACGACTCTTGCTGTTGGTTACCTC +
Preference number: 1 (lower is better)
Translates to: DAGSAGISGWPRGCG*RQLVHITTLAVGYL
Trigger: GAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 90 bp AGCCCAGAGACTCCATCTACACCTGTCAGCCCAGGGAGTCGCGTCTaGCTGCCTCAGGGAATCCTGTCTAGGGGGTCACGTCTGTGCCAC +
Preference number: 1 (lower is better)
Translates to: SPETPSTPVSPGSRV*LPQGILSRGSRLCH
Trigger: GTGGCACAGACGTGACCCCCTAGACAGGATTCCCTGAGGCAGGCAGACGCGACTCCCTGGGCTGACAGGTGTAGATGGAGTCTCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 90 bp ATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTaGGTGGCGGCAGCTTGTACACATCACGACTCTTGCTGTTGGTTA +
Preference number: 1 (lower is better)
Translates to: MGCGICRHLRVAPGV*VAAACTHHDSCCWL
Trigger: TAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR TCA 90 bp GATGCGTTTCCAGCGCTGCATGTTGCGATAGATGAGTGTGGAGGGTaGGGGCTCGGGCTCAGAGGGCTCATCGTCAGGGGTGCCCTGCAT +
Preference number: 1 (lower is better)
Translates to: DAFPALHVAIDECGG*GLGLRGLIVRGALH
Trigger: ATGCAGGGCACCCCTGACGATGAGCCCTCTGAGCCCGAGCCCTCACCCTCCACACTCATCTATCGCAACATGCAGCGCTGGAAACGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 90 bp ATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGCTGAACTaGGCCAAGTCCACGCTCCGGTCGAACAGCTTGATCACATATGTG +
Preference number: 1 (lower is better)
Translates to: IQARQIGYSGVFSLN*AKSTLRSNSLITYV
Trigger: CACATATGTGATCAAGCTGTTCGACCGGAGCGTGGACTTGGCCCAGTTCAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR TCA 90 bp GTGCCACCTAGGAAGCTCTGTCCATTTCTGACAGTCCTATATGTCTaGAGGGTCCTATATGTCTGTCCTGGGGACCCTTGTCTACCCCGC +
Preference number: 1 (lower is better)
Translates to: VPPRKLCPFLTVLYV*RVLYVCPGDPCLPR
Trigger: GCGGGGTAGACAAGGGTCCCCAGGACAGACATATAGGACCCTTCAGACATATAGGACTGTCAGAAATGGACAGAGCTTCCTAGGTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR TCA 90 bp TCTAGGGGGTCACGTCTGTGCCACCTAGGAAGCTCTGTCCATTTCTaGCAGTCCTATATGTCTGAAGGGTCCTATATGTCTGTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: SRGSRLCHLGSSVHF*QSYMSEGSYMSVLG
Trigger: CCCCAGGACAGACATATAGGACCCTTCAGACATATAGGACTGTCAGAAATGGACAGAGCTTCCTAGGTGGCACAGACGTGACCCCCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 90 bp CCTGGGAACATCACTGTCGTTCGTACATCTCTCGTAGGATCTTCATaGTTTCTGAGTAACGAAGCTGGTTCCGATGAGAGGCCTCCTTCC +
Preference number: 1 (lower is better)
Translates to: PGNITVVRTSLVGSS*FLSNEAGSDERPPS
Trigger: GGAAGGAGGCCTCTCATCGGAACCAGCTTCGTTACTCAGAAAGCATGAAGATCCTACGAGAGATGTACGAACGACAGTGATGTTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR GCA 90 bp TGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTCCAGCGGGTCAAGTGTaGCTGCCCCAGGGACCCCTG +
Preference number: 2 (lower is better)
Translates to: CGICRHLRVAPGVWVAAAPAGQV*LPQGPL
Trigger: CAGGGGTCCCTGGGGCAGGCACACTTGACCCGCTGG...AGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CCA 90 bp AGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGCCAGGCGCGGCAGATTaGGTACAGTGGCGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: SGDGMRDLQASPGGPGGVPGAAD*VQWRVL
Trigger: GAGAACACGCCACTGTACCCAATCTGCCGCGCCTGG...CACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 90 bp AGGGGTGAGCTGGGAGAGCATTCACGCTCGCGCACAGAGGGGCTGTaGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCG +
Preference number: 2 (lower is better)
Translates to: RGELGEHSRSRTEGL*RIQARQIGYSGVFS
Trigger: CGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGTGAATGCTCTCCCAGCTCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 90 bp CTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTaGTACACATCACGACTCTTGCTGTTGGTTACCTCTGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: LQASPGGPGGVGGGS*YTSRLLLLVTSEPW
Trigger: CCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR GCA 90 bp ATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACAACTCCCATCCATTCCTaGCCAGCCCCTGCTCCTCAA +
Preference number: 2 (lower is better)
Translates to: ICRHLRVAPGVWVAAACTTPIHS*PAPAPQ
Trigger: TTGAGGAGCAGGGGCTGGGCAGGAATGGATGGGAGT...TGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR TCA 90 bp AGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGACAGGAGGCATGTATaGAGGGCAGACACCTCAACC +
Preference number: 2 (lower is better)
Translates to: SGDGMRDLQASPGGPGGVDRRHV*RADTST
Trigger: GGTTGAGGTGTCTGCCCTTCATACATGCCTCCTGTC...CACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR TCA 90 bp AACGAAGCTGGTTCCGATGAGAGGCCTCCTTCCACCTCTGGCGGATGCGTTTCCGTGGCGTGTTCTCGCTaGACTGGGCCAAGTCCACGC +
Preference number: 2 (lower is better)
Translates to: NEAGSDERPPSTSGGCVSVACSR*TGPSPR
Trigger: GCGTGGACTTGGCCCAGTTCAGCGAGAACACGCCAC...GGAAACGCATCCGCCAGAGGTGGAAGGAGGCCTCTCATCGGAACCAGCTTCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CCA 90 bp GGTCCTATATGTCTGTCCTGGGGACCCTTGTCTACCCCGCTGGGTCAGATGGCTTTCTTCCTCCGCTGGTaGGGGAAGCGGGCAGATGGC +
Preference number: 2 (lower is better)
Translates to: GPICLSWGPLSTPLGQMAFFLRW*GKRADG
Trigger: GCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAA...AGCCATCTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAGACATATAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CCA 90 bp CTACACCTGTCAGCCCAGGGAGTCGCGTCTGCCTGCCTCAGGGAATCCTGTCTACTCTTCTTCCTCCGCTaGTGGGGGAAGCGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: LHLSAQGVASACLRESCLLFFLR*WGKRAD
Trigger: ATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAG...TAGACAGGATTCCCTGAGGCAGGCAGACGCGACTCCCTGGGCTGACAGGTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR TCA 90 bp CTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTTCCGGTCGAACAGCTTaGTCACATATGTGTTGGATC +
Preference number: 2 (lower is better)
Translates to: LRVAPGVWVAAACTHHDSSGRTA*SHMCWI
Trigger: GATCCAACACATATGTGATCAAGCTGTTCGACCGGA...AGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR GCA 90 bp ACACATCACGACTCTTGCTGTTGGTTACCTCTGAGCCCTGGGGACACAAGGGCCAGCGGGCAGATGGCCTaGGTAGGGAGAGGGAGTGTC +
Preference number: 2 (lower is better)
Translates to: THHDSCCWLPLSPGDTRASGQMA*VGRGSV
Trigger: GACACTCCCTCTCCCTACGCAGGCCATCTGCCCGCT...GGCCCTTGTGTCCCCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR GCA 90 bp GTGGGTGGCGGCAGCTTGTACACATCACGACTCTTGCTGTTGGTTACCTCTGAGTTCCTGCCCAGCCCCTaGTCCTCAAGGCCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: VGGGSLYTSRLLLLVTSEFLPSP*SSRPGG
Trigger: GCCACCAGGCCTTGAGGAGCAGGGGCTGGGCAGGAA...CTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CCA 90 bp CACCTCAACCAGCCAGCGGGTCAAGTGTGCCTGCCCCAGGGACCCCTGTCTTCTCCTTGTCTACCCCGCTaGGTCAGATGGCTTATAGAC +
Preference number: 2 (lower is better)
Translates to: HLNQPAGQVCLPQGPLSSPCLPR*VRWLID
Trigger: GTCTATAAGCCATCTGACCCAGCGGGGTAGACAAGG...AGAAGACAGGGGTCCCTGGGGCAGGCACACTTGACCCGCTGGCTGGTTGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR TCA 90 bp AGATGGCTTATAGACTCCCATCCATTCCTGCCCAGCCCCTGCTCCTCAAGGCCTAGGGGCAGGATCCTTTaGGCCTATCCACCCACTGCC +
Preference number: 2 (lower is better)
Translates to: RWLIDSHPFLPSPCSSRPRGRIL*AYPPTA
Trigger: GGCAGTGGGTGGATAGGCTCAAAGGATCCTGCCCCT...AGGCCTTGAGGAGCAGGGGCTGGGCAGGAATGGATGGGAGTCTATAAGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR GCA 90 bp AGATGGCTTATAGACTCCCATCCATTCCTGCCCAGCCCCTGCTCCTCAAGGCCTTATGTGTTGGATCGCTaGGGCCCTCCCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: RWLIDSHPFLPSPCSSRPYVLDR*GPPSAS
Trigger: GCTGGCTGAGGGAGGGCCGCAGCGATCCAACACATA...AGGCCTTGAGGAGCAGGGGCTGGGCAGGAATGGATGGGAGTCTATAAGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CCA 90 bp AAATGGCATGAGGGGCTCGCTAAGGGACTCAGACAGGAGGCATGTATGAAGGGCGTGTTCTCGCTGAACTaGGCCAAGTCCACGCTCCGG +
Preference number: 2 (lower is better)
Translates to: KWHEGLAKGLRQEACMKGVFSLN*AKSTLR
Trigger: CCGGAGCGTGGACTTGGCCCAGTTCAGCGAGAACAC...GCCCTTCATACATGCCTCCTGTCTGAGTCCCTTAGCGAGCCCCTCATGCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 90 bp GCCACTTCTGTCTGTACTAAGGACCCTTGTCTAGCCCCTCGGCTCTaGGGAACCCCTGATCTTGGAGGTCCACATCTAACTGTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: ATSVCTKDPCLAPRL*GTPDLGGPHLTVQG
Trigger: ACCCTGGACAGTTAGATGTGGACCTCCAAGATCAGGGGTTCCCAAGAGCCGAGGGGCTAGACAAGGGTCCTTAGTACAGACAGAAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CCA 90 bp AGATGGCTTATAGACTCCCATCCATTCCTGCCCAGCCCCTGCTCCTCAAGGCCTGTCTCCCAGGCCAGGTaGTTACGTATGTCTTCCCTA +
Preference number: 2 (lower is better)
Translates to: RWLIDSHPFLPSPCSSRPVSQAR*LRMSSL
Trigger: TAGGGAAGACATACGTAACCACCTGGCCTGGGAGAC...AGGCCTTGAGGAGCAGGGGCTGGGCAGGAATGGATGGGAGTCTATAAGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CCA 90 bp AAATGGCATGAGGGGCTCGCTAAGGGACTCAGACAGGAGGCATGTATGAAGGGCGCAGATTGGGTACAGTaGCGTGTTCTCGCTGAACTG +
Preference number: 2 (lower is better)
Translates to: KWHEGLAKGLRQEACMKGADWVQ*RVLAEL
Trigger: CAGTTCAGCGAGAACACGCCACTGTACCCAATCTGC...GCCCTTCATACATGCCTCCTGTCTGAGTCCCTTAGCGAGCCCCTCATGCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 90 bp AGTCCTATATGTCTGAAGGGTCCTATATGTCTGTCCTGGGGACCCTaGTCTACCCCGCTGGGTCAGATGGCTTATAGACTCCCATCCATT +
Preference number: 2 (lower is better)
Translates to: SPICLKGPICLSWGP*STPLGQMAYRLPSI
Trigger: AATGGATGGGAGTCTATAAGCCATCTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAGACATATAGGACCCTTCAGACATATAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR TCA 90 bp AAATGGCATGAGGGGCTCGCTAAGGGACTCAGACAGGAGGCATGTATGAAGGGCACAGTCCTATATGTCTaGAGGGTCCTATATGTCTGT +
Preference number: 2 (lower is better)
Translates to: KWHEGLAKGLRQEACMKGTVLYV*RVLYVC
Trigger: ACAGACATATAGGACCCTTCAGACATATAGGACTGT...GCCCTTCATACATGCCTCCTGTCTGAGTCCCTTAGCGAGCCCCTCATGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CAA 90 bp TGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTCTAGCCCCTCGGCTCTaGGGAACCCCTGATCTTGGA +
Preference number: 3 (lower is better)
Translates to: CGICRHLRVAPGVWVAAALAPRL*GTPDLG
Trigger: TCCAAGATCAGGGGTTCCCAAGAGCCGAGGGGCTAG...AGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 72 bp GGGTGCCCTGCATCTCAGGCTGCAGTGGAGATGGGATaGGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGG +
Preference number: 3 (lower is better)
Translates to: GCPASQAAVEMG*GICRHLRVAPG
Trigger: CCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACTGCAGCCTGAGATGCAGGGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp TGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTaGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACAC +
Preference number: 3 (lower is better)
Translates to: WRWDAGSAGISG*PRGCGWRQLVH
Trigger: GTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp GGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTaGGTGGCGGCAGCTTGTACACATCACGACTCTTGC +
Preference number: 3 (lower is better)
Translates to: GICRHLRVAPGV*VAAACTHHDSC
Trigger: GCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 72 bp TGGGAGAGCATTCACGCTCGCGCACAGAGGGGCTGTTaGGCATCCAGGCGCGGCAGATTGGGTACAGTGGCG +
Preference number: 3 (lower is better)
Translates to: WESIHARAQRGC*ASRRGRLGTVA
Trigger: CGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGTGAATGCTCTCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CAA 90 bp CTCCATCTACACCTGTCAGCCCAGGGAGTCGCGTCTGCCTGCCTCAGGGAATCCCTGTCCTGGGGACCCTaGTCTACCCCGCTGGGTCAG +
Preference number: 3 (lower is better)
Translates to: LHLHLSAQGVASACLRESLSWGP*STPLGQ
Trigger: CTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAG...GGATTCCCTGAGGCAGGCAGACGCGACTCCCTGGGCTGACAGGTGTAGATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 72 bp GCAGACACCTCAACCAGCCAGCGGGTCAAGTGTGCCTaGCCCAGGGACCCCTGTCTTCTCCTATCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: ADTSTSQRVKCA*PRDPCLLLSSP
Trigger: TGGGCTGGATAGGAGAAGACAGGGGTCCCTGGGGCAGGCACACTTGACCCGCTGGCTGGTTGAGGTGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp CCATCATCCATCTCCCTCCTCTTCTTCCTCCGCTGGTaGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: PSSISLLFFLRW*GKRADGLRRER
Trigger: CCTCTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAGGGAGATGGATGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp AGCCCATCATCCATCTCCCTCCTCTTCTTCCTCCGCTaGTGGGGGAAGCGGGCAGATGGCCTGCGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: SPSSISLLFFLR*WGKRADGLRRE
Trigger: CTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAGGGAGATGGATGATGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp TCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTaGCGGCAGCTTGTACACATCACGACTCTTGCTGTT +
Preference number: 3 (lower is better)
Translates to: SAGISGWPRGCG*RQLVHITTLAV
Trigger: AACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CAA 90 bp ATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACATTGATCACATATGTGTaGGATCGCTGCGGCCCTCCC +
Preference number: 3 (lower is better)
Translates to: ICRHLRVAPGVWVAAACTLITYV*DRCGPP
Trigger: GGGAGGGCCGCAGCGATCCAACACATATGTGATCAA...TGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CAA 90 bp CACCTCAACCAGCCAGCGGGTCAAGTGTGCCTGCCCCAGGGACCCCTGTCTTCTTCCAGGCGCGGCAGATaGGGTACAGTGGCGTGTTCT +
Preference number: 3 (lower is better)
Translates to: HLNQPAGQVCLPQGPLSSSRRGR*GTVACS
Trigger: AGAACACGCCACTGTACCCAATCTGCCGCGCCTGGA...AGAAGACAGGGGTCCCTGGGGCAGGCACACTTGACCCGCTGGCTGGTTGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR TCA 72 bp AGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGCTaGACTGGGCCAAGTCCACGCTCCGGTCGAACAGCT +
Preference number: 3 (lower is better)
Translates to: RRGRLGTVACSR*TGPSPRSGRTA
Trigger: AGCTGTTCGACCGGAGCGTGGACTTGGCCCAGTTCAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 72 bp AAGGGCAGACACCTCAACCAGCCAGCGGGTCAAGTGTaGCTGCCCCAGGGACCCCTGTCTTCTCCTATCCAG +
Preference number: 3 (lower is better)
Translates to: KGRHLNQPAGQV*LPQGPLSSPIQ
Trigger: CTGGATAGGAGAAGACAGGGGTCCCTGGGGCAGGCACACTTGACCCGCTGGCTGGTTGAGGTGTCTGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp GCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTaGCGTGTTCTCGCTGAACTGGGCCAAGTCCACGCT +
Preference number: 3 (lower is better)
Translates to: AVAHPGAADWVQ*RVLAELGQVHA
Trigger: AGCGTGGACTTGGCCCAGTTCAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp CACAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGATTaGGTACAGTGGCGTGTTCTCGCTGAACTGGGCCAA +
Preference number: 3 (lower is better)
Translates to: HRGAVAHPGAAD*VQWRVLAELGQ
Trigger: TTGGCCCAGTTCAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 72 bp CATCTACACCTGTCAGCCCAGGGAGTCGCGTCTGCCTaGCTCAGGGAATCCTGTCTAGGGGGTCACGTCTGT +
Preference number: 3 (lower is better)
Translates to: HLHLSAQGVASA*LRESCLGGHVC
Trigger: ACAGACGTGACCCCCTAGACAGGATTCCCTGAGGCAGGCAGACGCGACTCCCTGGGCTGACAGGTGTAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp TGTCCTGGGGACCCTTGTCTACCCCGCTGGGTCAGATaGCTTATAGACTCCCATCCATTCCTGCCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: CPGDPCLPRWVR*LIDSHPFLPSP
Trigger: GGGGCTGGGCAGGAATGGATGGGAGTCTATAAGCCATCTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp CGGCAGATTGGGTACAGTGGCGTGTTCTCGCTGAACTaGGCCAAGTCCACGCTCCGGTCGAACAGCTTGATC +
Preference number: 3 (lower is better)
Translates to: RQIGYSGVFSLN*AKSTLRSNSLI
Trigger: GATCAAGCTGTTCGACCGGAGCGTGGACTTGGCCCAGTTCAGCGAGAACACGCCACTGTACCCAATCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp GTGGCGGCAGCTTGTACACATCACGACTCTTGCTGTTaGTTACCTCTGAGCCCTGGGGACACAAGGGCCCCA +
Preference number: 3 (lower is better)
Translates to: VAAACTHHDSCC*LPLSPGDTRAP
Trigger: TGGGGCCCTTGTGTCCCCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR-3UTR CAA 90 bp CACCTCAACCAGCCAGCGGGTCAAGTGTGCCTGCCCCAGGGACCCCTGTCTTCTCTCCGGTCGAACAGCTaGATCACATATGTGTTGGAT +
Preference number: 3 (lower is better)
Translates to: HLNQPAGQVCLPQGPLSSLRSNS*ITYVLD
Trigger: ATCCAACACATATGTGATCAAGCTGTTCGACCGGAG...AGAAGACAGGGGTCCCTGGGGCAGGCACACTTGACCCGCTGGCTGGTTGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 72 bp GTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTTaGTGTTGGTTACCTCTGAGCCCTGGGGACACAAGG +
Preference number: 3 (lower is better)
Translates to: VWVAAACTHHDS*CWLPLSPGDTR
Trigger: CCTTGTGTCCCCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp TCCAGGGTAACCCTGTTCCCTGTCTCCCAGGCCAGGTaGTTACGTATGTCTTCCCTAGGGACTCTGATCCAC +
Preference number: 3 (lower is better)
Translates to: SRVTLFPVSQAR*LRMSSLGTLIH
Trigger: GTGGATCAGAGTCCCTAGGGAAGACATACGTAACCACCTGGCCTGGGAGACAGGGAACAGGGTTACCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CCA 72 bp CTATATGTCTGTCCTGGGGACCCTTGTCTACCCCGCTaGGTCAGATGGCTTATAGACTCCCATCCATTCCTG +
Preference number: 3 (lower is better)
Translates to: LYVCPGDPCLPR*VRWLIDSHPFL
Trigger: CAGGAATGGATGGGAGTCTATAAGCCATCTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAGACATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR TCA 72 bp AGGAAGCTCTGTCCATTTCTGACAGTCCTATATGTCTaGAGGGTCCTATATGTCTGTCCTGGGGACCCTTGT +
Preference number: 3 (lower is better)
Translates to: RKLCPFLTVLYV*RVLYVCPGDPC
Trigger: ACAAGGGTCCCCAGGACAGACATATAGGACCCTTCAGACATATAGGACTGTCAGAAATGGACAGAGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR GCA 72 bp ATCACTGTCGTTCGTACATCTCTCGTAGGATCTTCATaGTTTCTGAGTAACGAAGCTGGTTCCGATGAGAGG +
Preference number: 3 (lower is better)
Translates to: ITVVRTSLVGSS*FLSNEAGSDER
Trigger: CCTCTCATCGGAACCAGCTTCGTTACTCAGAAAGCATGAAGATCCTACGAGAGATGTACGAACGACAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp GGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCTCGTCAGGGGTGCCCTaGATCTCAGGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GMRDLQASPGGPGGVGGGSSGVP*ISGCSG
Trigger: TCCACTGCAGCCTGAGATGCAGGGCACCCCTGACGA...GCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp TGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTCGCTCCCTGTCCATGTaGCTCTTCTCCAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: CGICRHLRVAPGVWVAAARSLSM*LFSSRH
Trigger: GTGTCTGCTGGAGAAGAGTCACATGGACAGGGAGCG...AGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp TGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTGCAGTGGAGATGGGATaGGGGATCTGCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: CGICRHLRVAPGVWVAAAAVEMG*GICRHL
Trigger: GAGATGCCTGCAGATCCCGCATCCCATCTCCACTGC...AGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp ATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACAGTGGCGTGTTCTCGCTaGACTGGGCCAAGTCCACGC +
Preference number: 4 (lower is better)
Translates to: ICRHLRVAPGVWVAAACTVACSR*TGPSPR
Trigger: GCGTGGACTTGGCCCAGTTCAGCGAGAACACGCCAC...TGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp TGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTGCATGTTGCGATAGATaGGTGTGGAGGGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CGICRHLRVAPGVWVAAAACCDR*VWRVRA
Trigger: AGCCCTCACCCTCCACACTCATCTATCGCAACATGC...AGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp GGGAGAGCATTCACGCTCGCGCACAGAGGGGCTGTTGCGCATCCAGGCGCGGCAATGGGATGCGGGATCTaGAGGCATCTCCGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRAFTLAHRGAVAHPGAAMGCGI*RHLRVA
Trigger: GGCCACCCGGAGATGCCTGCAGATCCCGCATCCCAT...TGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGTGAATGCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp AGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGAGCGGGCAGATGGCCTaGGTAGGGAGAGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SGDGMRDLQASPGGPGGVSGQMA*VGRGSV
Trigger: GACACTCCCTCTCCCTACGCAGGCCATCTGCCCGCT...CACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp GGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGCTGGTGGCCCCGGGGGTGTaGGTGGCGGCAGCTTGTACA +
Preference number: 4 (lower is better)
Translates to: GLLRIQARQIGYSGVFSLVAPGV*VAAACT
Trigger: TGTACAAGCTGCCGCCACCCACACCCCCGGGGCCAC...CAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp AGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGCTGTTGGTTACCTCTaGGCCCTGGGGACACAAGGG +
Preference number: 4 (lower is better)
Translates to: SGDGMRDLQASPGGPGGVAVGYL*ALGTQG
Trigger: CCCTTGTGTCCCCAGGGCTCAGAGGTAACCAACAGC...CACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp TGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTGTTGGTTCCGGGCTTTaGCCATCTCCAGCTCTGATT +
Preference number: 4 (lower is better)
Translates to: CGICRHLRVAPGVWVAAAVGSGL*PSPALI
Trigger: AATCAGAGCTGGAGATGGCCAAAGCCCGGAACCAAC...AGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp CTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTCTCTTCTTCCTCCGCTaGTGGGGGAAGCGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LRVAPGVWVAAACTHHDSLFFLR*WGKRAD
Trigger: ATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAG...AGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp ATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACAGTGTTCTCGCTGAACTaGGCCAAGTCCACGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ICRHLRVAPGVWVAAACTVFSLN*AKSTLR
Trigger: CCGGAGCGTGGACTTGGCCCAGTTCAGCGAGAACAC...TGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp TCCTCTTCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGAGGGGCAGGGGTGAGCTaGGAGAGCATTCACGCTCGC +
Preference number: 4 (lower is better)
Translates to: SSSSSAGGGSGQMACVGRGAGVS*ESIHAR
Trigger: GCGAGCGTGAATGCTCTCCCAGCTCACCCCTGCCCC...TCTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp TCCTCTTCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGACCCCGGGGGTGTGGGTaGCGGCAGCTTGTACACATC +
Preference number: 4 (lower is better)
Translates to: SSSSSAGGGSGQMACVGRPRGCG*RQLVHI
Trigger: GATGTGTACAAGCTGCCGCCACCCACACCCCCGGGG...TCTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp AACGAAGCTGGTTCCGATGAGAGGCCTCCTTCCACCTCTGGCGGATGCGTTTCCGCAGGCATCTCCGGGTaGCCCCGGGGGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NEAGSDERPPSTSGGCVSAGISG*PRGCGW
Trigger: CCACCCACACCCCCGGGGCCACCCGGAGATGCCTGC...GGAAACGCATCCGCCAGAGGTGGAAGGAGGCCTCTCATCGGAACCAGCTTCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp GGGAGAGCATTCACGCTCGCGCACAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGTTACCTCTGAGCCCTaGGGACACAAGGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: GRAFTLAHRGAVAHPGAAVTSEP*GHKGPM
Trigger: CATGGGGCCCTTGTGTCCCCAGGGCTCAGAGGTAAC...TGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGTGAATGCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp TGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTGTCTCCCAGGCCAGGTaGTTACGTATGTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: CGICRHLRVAPGVWVAAAVSQAR*LRMSSL
Trigger: TAGGGAAGACATACGTAACCACCTGGCCTGGGAGAC...AGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 72 bp CTGGGAGAGCATTCACGCTCGCGCACAGAGGGGCTGTaGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGC +
Preference number: 4 (lower is better)
Translates to: LGEHSRSRTEGL*RIQARQIGYSG
Trigger: GCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGTGAATGCTCTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp AGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGTCCACCTCTGGCGGATaGGTTTCCAGCGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: SGDGMRDLQASPGGPGGVSTSGG*VSSAAC
Trigger: ACATGCAGCGCTGGAAACGCATCCGCCAGAGGTGGA...CACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp AGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGACACAAGGGCCCCATaGCAGGCCCAAGAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SGDGMRDLQASPGGPGGVDTRAP*QAQESQ
Trigger: TTGACTCTCTTGGGCCTGGCATGGGGCCCTTGTGTC...CACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp GGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGCTGCCAGGGAGTCGCGTCTaGCTGCCTCAGGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: GLLRIQARQIGYSGVFSLPGSRV*LPQGIL
Trigger: CAGGATTCCCTGAGGCAGGCAGACGCGACTCCCTGG...CAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp CTCCTCTTCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGTTTGGGTCCGGGATCTaGCTAGCTGGGTCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LLFFLRWWGKRADGLRREFGSGI*LAGSEA
Trigger: CGCCTCTGACCCAGCTAGCCAGATCCCGGACCCAAA...CTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp GAGAGCATTCACGCTCGCGCACAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGAAGGCTGCAGTGGAGATaGGATGCGGGATCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ESIHARAQRGCCASRRGRRLQWR*DAGSAG
Trigger: GCCTGCAGATCCCGCATCCCATCTCCACTGCAGCCT...TCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGTGAATGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp GGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGCTGGCCTCCTTCCACCTCTaGCGGATGCGTTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GLLRIQARQIGYSGVFSLASFHL*RMRFQR
Trigger: GCGCTGGAAACGCATCCGCCAGAGGTGGAAGGAGGC...CAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp GAGAGCATTCACGCTCGCGCACAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGAGGGACAGTTCAAAGATaGGCTTCGTGGGCCACGGGT +
Preference number: 4 (lower is better)
Translates to: ESIHARAQRGCCASRRGRGTVQR*ASWATG
Trigger: ACCCGTGGCCCACGAAGCTCATCTTTGAACTGTCCC...TCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGTGAATGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp CTCCATCTACACCTGTCAGCCCAGGGAGTCGCGTCTGCCTGCCTCAGGGAATCCAGGGGCAGGATCCTTTaGGCCTATCCACCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LHLHLSAQGVASACLRESRGRIL*AYPPTA
Trigger: GGCAGTGGGTGGATAGGCTCAAAGGATCCTGCCCCT...GGATTCCCTGAGGCAGGCAGACGCGACTCCCTGGGCTGACAGGTGTAGATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp CTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTGATCCAGGATTCACGTaGGGGACCTGTGTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LRVAPGVWVAAACTHHDSDPGFT*GTCVCL
Trigger: TAGACAGACACAGGTCCCTCACGTGAATCCTGGATC...AGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp CTCCTCTTCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGTCTGTGTGCCTAGCCTaGTCCAGGATTCACGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLFFLRWWGKRADGLRRESVCLA*SRIHVR
Trigger: CCTCACGTGAATCCTGGATCAGGCTAGGCACACAGA...CTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp AACGAAGCTGGTTCCGATGAGAGGCCTCCTTCCACCTCTGGCGGATGCGTTTCCTTCCTGCCCAGCCCCTaGTCCTCAAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NEAGSDERPPSTSGGCVSFLPSP*SSRPGG
Trigger: GCCACCAGGCCTTGAGGAGCAGGGGCTGGGCAGGAA...GGAAACGCATCCGCCAGAGGTGGAAGGAGGCCTCTCATCGGAACCAGCTTCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp GGTAACCCTGTTCCCTGTCTCCCAGGCCAGGTGGTTACGTATGTCTTCCCTAGGCCAGCGGGTCAAGTGTaGCTGCCCCAGGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: GNPVPCLPGQVVTYVFPRPAGQV*LPQGPL
Trigger: CAGGGGTCCCTGGGGCAGGCACACTTGACCCGCTGG...CCTAGGGAAGACATACGTAACCACCTGGCCTGGGAGACAGGGAACAGGGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp CTCCTCTTCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGACAGGGAACATGGTTTaGGTCCGGGATCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: LLFFLRWWGKRADGLRRETGNMV*VRDLAS
Trigger: GCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGT...CTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp ATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACAAAGACAGCATCCAGTTaGTTCCGGGCTTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: ICRHLRVAPGVWVAAACTKTASS*FRALAI
Trigger: GATGGCCAAAGCCCGGAACCAACTGGATGCTGTCTT...TGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp GGGAGAGCATTCACGCTCGCGCACAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGCAGATTGGGTACAGTaGCGTGTTCTCGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: GRAFTLAHRGAVAHPGAAADWVQ*RVLAEL
Trigger: CAGTTCAGCGAGAACACGCCACTGTACCCAATCTGC...TGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCGCGAGCGTGAATGCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp AGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGCTCCTCAAGGCCTGGTaGCCACTTCTGTCTGTACTA +
Preference number: 4 (lower is better)
Translates to: SGDGMRDLQASPGGPGGVLLKAW*PLLSVL
Trigger: TAGTACAGACAGAAGTGGCCACCAGGCCTTGAGGAG...CACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 72 bp TCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTaGTACACATCACGACTCTTGCTGTTGGTTACCTCT +
Preference number: 4 (lower is better)
Translates to: SPGGPGGVGGGS*YTSRLLLLVTS
Trigger: AGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp AGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGCCATCTCCAGCTCTaGTTTCTCCACTTTCACCTT +
Preference number: 4 (lower is better)
Translates to: SGDGMRDLQASPGGPGGVGHLQL*FLHFHL
Trigger: AAGGTGAAAGTGGAGAAATCAGAGCTGGAGATGGCC...CACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp GGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGCTGGCTCTTGGGAACCCCTaGTCTTGGAGGTCCACATCT +
Preference number: 4 (lower is better)
Translates to: GLLRIQARQIGYSGVFSLALGNP*SWRSTS
Trigger: AGATGTGGACCTCCAAGATCAGGGGTTCCCAAGAGC...CAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp GGTAACCCTGTTCCCTGTCTCCCAGGCCAGGTGGTTACGTATGTCTTCCCTAGGGCACAGAGGGGCTGTTaGGCATCCAGGCGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GNPVPCLPGQVVTYVFPRAQRGC*ASRRGR
Trigger: TCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGC...CCTAGGGAAGACATACGTAACCACCTGGCCTGGGAGACAGGGAACAGGGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp CACCTCAACCAGCCAGCGGGTCAAGTGTGCCTGCCCCAGGGACCCCTGTCTTCTCCTTCACAGGGAACATaGTTTGGGTCCGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: HLNQPAGQVCLPQGPLSSPSQGT*FGSGIW
Trigger: CCAGATCCCGGACCCAAACCATGTTCCCTGTGAAGG...AGAAGACAGGGGTCCCTGGGGCAGGCACACTTGACCCGCTGGCTGGTTGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 72 bp GGTGGCGGCAGCTTGTACACATCACGACTCTTGCTGTaGGTTACCTCTGAGCCCTGGGGACACAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GGGSLYTSRLLL*VTSEPWGHKGP
Trigger: GGGGCCCTTGTGTCCCCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp ATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACAGATCTTCATGCTTTCTaGGTAACGAAGCTGGTTCCG +
Preference number: 4 (lower is better)
Translates to: ICRHLRVAPGVWVAAACTDLHAF*VTKLVP
Trigger: CGGAACCAGCTTCGTTACTCAGAAAGCATGAAGATC...TGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp GGTCCTATATGTCTGTCCTGGGGACCCTTGTCTACCCCGCTGGGTCAGATGGCTTATGTGTTGGATCGCTaGGGCCCTCCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPICLSWGPLSTPLGQMAYVLDR*GPPSAS
Trigger: GCTGGCTGAGGGAGGGCCGCAGCGATCCAACACATA...AGCCATCTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAGACATATAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp AGTGGAGATGGGATGCGGGATCTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGCACATTCATCCCTCCTaGCTTTCCCAGCAACAAATG +
Preference number: 4 (lower is better)
Translates to: SGDGMRDLQASPGGPGGVHIHPS*LSQQQM
Trigger: CATTTGTTGCTGGGAAAGGCAGGAGGGATGAATGTG...CACACCCCCGGGGCCACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp CTACACCTGTCAGCCCAGGGAGTCGCGTCTGCCTGCCTCAGGGAATCCTGTCTAACTCCCATCCATTCCTaGCCAGCCCCTGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LHLSAQGVASACLRESCLTPIHS*PAPAPQ
Trigger: TTGAGGAGCAGGGGCTGGGCAGGAATGGATGGGAGT...TAGACAGGATTCCCTGAGGCAGGCAGACGCGACTCCCTGGGCTGACAGGTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp AGATGGCTTATAGACTCCCATCCATTCCTGCCCAGCCCCTGCTCCTCAAGGCCTTTCTTCCTCCGCTGGTaGGGGAAGCGGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: RWLIDSHPFLPSPCSSRPFFLRW*GKRADG
Trigger: GCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAA...AGGCCTTGAGGAGCAGGGGCTGGGCAGGAATGGATGGGAGTCTATAAGCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp GGTCCTATATGTCTGTCCTGGGGACCCTTGTCTACCCCGCTGGGTCAGATGGCTCCAGGCGCGGCAGATTaGGTACAGTGGCGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GPICLSWGPLSTPLGQMAPGAAD*VQWRVL
Trigger: GAGAACACGCCACTGTACCCAATCTGCCGCGCCTGG...AGCCATCTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAGACATATAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 72 bp CTGAACTGGGCCAAGTCCACGCTCCGGTCGAACAGCTaGATCACATATGTGTTGGATCGCTGCGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LNWAKSTLRSNS*ITYVLDRCGPP
Trigger: GGGAGGGCCGCAGCGATCCAACACATATGTGATCAAGCTGTTCGACCGGAGCGTGGACTTGGCCCAGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp CTCCTCTTCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGTCCGGTCGAACAGCTTaGTCACATATGTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: LLFFLRWWGKRADGLRRESGRTA*SHMCWI
Trigger: GATCCAACACATATGTGATCAAGCTGTTCGACCGGA...CTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp ACACATCACGACTCTTGCTGTTGGTTACCTCTGAGCCCTGGGGACACAAGGGCCCCCTGCATCTCAGGCTaGAGTGGAGATGGGATGCGG +
Preference number: 4 (lower is better)
Translates to: THHDSCCWLPLSPGDTRAPCISG*SGDGMR
Trigger: CCGCATCCCATCTCCACTGCAGCCTGAGATGCAGGG...GGCCCTTGTGTCCCCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp AAATGGCATGAGGGGCTCGCTAAGGGACTCAGACAGGAGGCATGTATGAAGGGCCGGGTCAAGTGTGCCTaGCCCAGGGACCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: KWHEGLAKGLRQEACMKGRVKCA*PRDPCL
Trigger: AAGACAGGGGTCCCTGGGGCAGGCACACTTGACCCG...GCCCTTCATACATGCCTCCTGTCTGAGTCCCTTAGCGAGCCCCTCATGCCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp AAATGGCATGAGGGGCTCGCTAAGGGACTCAGACAGGAGGCATGTATGAAGGGCCGGGATCTGGCTAGCTaGGTCAGAGGCGCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KWHEGLAKGLRQEACMKGRDLAS*VRGAPK
Trigger: CTTTGGGGCGCCTCTGACCCAGCTAGCCAGATCCCG...GCCCTTCATACATGCCTCCTGTCTGAGTCCCTTAGCGAGCCCCTCATGCCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp GGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGCTGTTTCCCAGCAACAAATaGCATGAGGGGCTCGCTAAG +
Preference number: 4 (lower is better)
Translates to: GLLRIQARQIGYSGVFSLFPSNK*HEGLAK
Trigger: CTTAGCGAGCCCCTCATGCCATTTGTTGCTGGGAAA...CAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp GGTCCTATATGTCTGTCCTGGGGACCCTTGTCTACCCCGCTGGGTCAGATGGCTGACAGGAGGCATGTATaGAGGGCAGACACCTCAACC +
Preference number: 4 (lower is better)
Translates to: GPICLSWGPLSTPLGQMADRRHV*RADTST
Trigger: GGTTGAGGTGTCTGCCCTTCATACATGCCTCCTGTC...AGCCATCTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAGACATATAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp CTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTAGCTCTGTCCATTTCTaGCAGTCCTATATGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LRVAPGVWVAAACTHHDSSSVHF*QSYMSE
Trigger: TTCAGACATATAGGACTGTCAGAAATGGACAGAGCT...AGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp AACGAAGCTGGTTCCGATGAGAGGCCTCCTTCCACCTCTGGCGGATGCGTTTCCCCCCGCTGGGTCAGATaGCTTATAGACTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: NEAGSDERPPSTSGGCVSPRWVR*LIDSHP
Trigger: TGGATGGGAGTCTATAAGCCATCTGACCCAGCGGGG...GGAAACGCATCCGCCAGAGGTGGAAGGAGGCCTCTCATCGGAACCAGCTTCGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 72 bp GGTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTaGCTGTTGGTTACCTCTGAGCCCTGGGGACACAAG +
Preference number: 4 (lower is better)
Translates to: GVGGGSLYTSRL*LLVTSEPWGHK
Trigger: CTTGTGTCCCCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp CTCCTCTTCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGACAGTCCTATATGTCTaGAGGGTCCTATATGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLFFLRWWGKRADGLRRETVLYV*RVLYVC
Trigger: ACAGACATATAGGACCCTTCAGACATATAGGACTGT...CTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp AAATGGCATGAGGGGCTCGCTAAGGGACTCAGACAGGAGGCATGTATGAAGGGCGGAGTCGCGTCTGCCTaGCTCAGGGAATCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: KWHEGLAKGLRQEACMKGGVASA*LRESCL
Trigger: TAGACAGGATTCCCTGAGGCAGGCAGACGCGACTCC...GCCCTTCATACATGCCTCCTGTCTGAGTCCCTTAGCGAGCCCCTCATGCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp GGTCCTATATGTCTGTCCTGGGGACCCTTGTCTACCCCGCTGGGTCAGATGGCTCCTTGTCTACCCCGCTaGGTCAGATGGCTTATAGAC +
Preference number: 4 (lower is better)
Translates to: GPICLSWGPLSTPLGQMAPCLPR*VRWLID
Trigger: GTCTATAAGCCATCTGACCCAGCGGGGTAGACAAGG...AGCCATCTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAGACATATAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CCA 90 bp TCCTCTTCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGCGTAGGGAGACAGGATCACTTATTGTaGGTGTCTGAGGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SSSSSAGGGSGQMACVGRQDHLL*VSEGVF
Trigger: GAAAACACCCTCAGACACCCACAATAAGTGATCCTG...TCTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR TCA 90 bp GGTAACCCTGTTCCCTGTCTCCCAGGCCAGGTGGTTACGTATGTCTTCCCTAGGCTTATTGTGGGTGTCTaGGGGTGTTTTCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GNPVPCLPGQVVTYVFPRLIVGV*GCFPSF
Trigger: GAAGCTGGGAAAACACCCTCAGACACCCACAATAAG...CCTAGGGAAGACATACGTAACCACCTGGCCTGGGAGACAGGGAACAGGGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR GCA 90 bp CAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCTCGTAGGATCTTCATaGTTTCTGAGTAACGAAGCT +
Preference number: 4 (lower is better)
Translates to: QRGCCASRRGRLGTVACSLVGSS*FLSNEA
Trigger: AGCTTCGTTACTCAGAAAGCATGAAGATCCTACGAG...AGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
3UTR CAA 72 bp GTCTGTACTAAGGACCCTTGTCTAGCCCCTCGGCTCTaGGGAACCCCTGATCTTGGAGGTCCACATCTAACT +
Preference number: 4 (lower is better)
Translates to: VCTKDPCLAPRL*GTPDLGGPHLT
Trigger: AGTTAGATGTGGACCTCCAAGATCAGGGGTTCCCAAGAGCCGAGGGGCTAGACAAGGGTCCTTAGTACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS CCA 90 bp GTGGGCCACGGGTCCTCCGCCTTTGGTTGTGTCCAGCCTGGACCGTaGCCACCACCCTTCTGTGGGCGGGCCCCTTCGGCAGTAGCTTGT +
Preference number: 5 (lower is better)
Translates to: VGHGSSAFGCVQPGP*PPPFCGRAPSAVAC
Trigger: ACAAGCTACTGCCGAAGGGGCCCGCCCACAGAAGGGTGGTGGCCACGGTCCAGGCTGGACACAACCAAAGGCGGAGGACCCGTGGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS-3UTR CAA 90 bp GGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGCTGCTGTCCTGGGGACCCTaGTCTACCCCGCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: GLLRIQARQIGYSGVFSLLSWGP*STPLGQ
Trigger: CTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAG...CAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS GCA 90 bp GCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTTaGTGTTGGTTACCTCTGAGCCCTCCTCATCCTCAGGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: APGVWVAAACTHHDS*CWLPLSPPHPQAAG
Trigger: CCCCGCTGCCTGAGGATGAGGAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301159.14
ENST00000587108.5
CDS CCA 90 bp GGCCCTTGGCTCCTTACCGACCCTCTAGGGCCACTGTCTACTCACTaGATCGCTGCGGCCCTCCCTCAGCCAGCCCATCATCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: GPWLLTDPLGPLSTH*IAAALPQPAHHPSP
Trigger: GGGAGATGGATGATGGGCTGGCTGAGGGAGGGCCGCAGCGATCCAGTGAGTAGACAGTGGCCCTAGAGGGTCGGTAAGGAGCCAAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592871.1
CDS CCA 90 bp GCCAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTaGCGTGTTCTCGCTGAACTGGGCCAAGTCCACGCTCCGGTCGAA +
Preference number: 5 (lower is better)
Translates to: ARGAVAHPGAADWVQ*RVLAELGQVHAPVE
Trigger: TTCGACCGGAGCGTGGACTTGGCCCAGTTCAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591163.1
CDS CCA 90 bp GGGAGACTCAGCAGTTGCAAAGGGCCCTACGAGGGGCAAGCAGGCTaGGGGACGCTCACCTCTGGCGGATGCGTTTCCAGCGCTGCATGT +
Preference number: 5 (lower is better)
Translates to: GRLSSCKGPYEGQAG*GTLTSGGCVSSAAC
Trigger: ACATGCAGCGCTGGAAACGCATCCGCCAGAGGTGAGCGTCCCCCAGCCTGCTTGCCCCTCGTAGGGCCCTTTGCAACTGCTGAGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587108.5
ENST00000590890.1
CDS CCA 90 bp GGACAGTTCAAAGATGAGCTTCGTGGGCCACGGGTCCTCCGCCTTTaGTTGTGTCCAGCCTGGACCGTGGCCACCACCCTTCTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: GQFKDELRGPRVLRL*LCPAWTVATTLLWA
Trigger: CGCCCACAGAAGGGTGGTGGCCACGGTCCAGGCTGGACACAACCAAAGGCGGAGGACCCGTGGCCCACGAAGCTCATCTTTGAACTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS-3UTR CAA 90 bp AGATGGCTTATAGACTCCCATCCATTCCTGCCCAGCCCCTGCTCCTCAAGGCCTCGCACAGAGGGGCTGTaGCGCATCCAGGCGCGGCAG +
Preference number: 5 (lower is better)
Translates to: RWLIDSHPFLPSPCSSRPRTEGL*RIQARQ
Trigger: CTGCCGCGCCTGGATGCGCAACAGCCCCTCTGTGCG...AGGCCTTGAGGAGCAGGGGCTGGGCAGGAATGGATGGGAGTCTATAAGCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS CCA 90 bp GATGGCCTGCGTAGGGAGAGGGAGTGTCAGGACTGGGGTAGGAGCTaGGAGCCTCTAGTCAGCTGGCTGGGACCCTGCCACCTTACCTTT +
Preference number: 5 (lower is better)
Translates to: DGLRRERECQDWGRS*EPLVSWLGPCHLTF
Trigger: AAAGGTAAGGTGGCAGGGTCCCAGCCAGCTGACTAGAGGCTCCCAGCTCCTACCCCAGTCCTGACACTCCCTCTCCCTACGCAGGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587108.5
ENST00000592871.1
CDS-3UTR CAA 90 bp GGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTCGCTGTCACGACTCTTGCTGTaGGTTACCTCTGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GLLRIQARQIGYSGVFSLSRLLL*VTSEPW
Trigger: CCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGA...CAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS GCA 90 bp TGGGAGCCTCTAGTCAGCTGGCTGGGACCCTGCCACCTTACCTTTTaGCAGTGGCTGCGATGGAGCAGTCCCTGTGGGGAAAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: WEPLVSWLGPCHLTF*QWLRWSSPCGERQL
Trigger: CAACTGTCTTTCCCCACAGGGACTGCTCCATCGCAGCCACTGGCAAAAGGTAAGGTGGCAGGGTCCCAGCCAGCTGACTAGAGGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS GCA 90 bp TCAAGCGCACACCGGGAGGGTGTGAAGGTGGCAGGCAACGCTCGCTaGCTGATACAGCGATTGTCAGGTGGGCTTCAGGGAAAAGTCGTG +
Preference number: 5 (lower is better)
Translates to: SSAHREGVKVAGNAR*LIQRLSGGLQGKVV
Trigger: CACGACTTTTCCCTGAAGCCCACCTGACAATCGCTGTATCAGGCAGCGAGCGTTGCCTGCCACCTTCACACCCTCCCGGTGTGCGCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS CCA 90 bp TTCACCTTCACAGGGAACATGGTTTGGGTCCGGGATCTGGCTAGCTaGGTCAGAGGCGCCCCAAAGGGCCTAGGGTCACAAGTCAAGGCG +
Preference number: 5 (lower is better)
Translates to: FTFTGNMVWVRDLAS*VRGAPKGLGSQVKA
Trigger: CGCCTTGACTTGTGACCCTAGGCCCTTTGGGGCGCCTCTGACCCAGCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGTGAAGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301159.14
ENST00000587108.5
ENST00000590706.6
ENST00000591076.1
ENST00000592871.1
ENST00000595455.1
CDS CCA 90 bp CCTCTAGTCAGCTGGCTGGGACCCTGCCACCTTACCTTTTGCCAGTaGCTGCGATGGAGCAGTCCCTGTGGGGAAAGACAGTTGACCCTC +
Preference number: 5 (lower is better)
Translates to: PLVSWLGPCHLTFCQ*LRWSSPCGERQLTL
Trigger: GAGGGTCAACTGTCTTTCCCCACAGGGACTGCTCCATCGCAGCCACTGGCAAAAGGTAAGGTGGCAGGGTCCCAGCCAGCTGACTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS CCA 90 bp GGCCCAGGCAGCCTGATTTCTCCACTTTCACCTTCACAGGGAACATaGTTTGGGTCCGGGATCTGGCTAGCTGGGTCAGAGGCGCCCCAA +
Preference number: 5 (lower is better)
Translates to: GPGSLISPLSPSQGT*FGSGIWLAGSEAPQ
Trigger: TTGGGGCGCCTCTGACCCAGCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGTGAAGGTGAAAGTGGAGAAATCAGGCTGCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591076.1
CDS-3UTR CAA 90 bp CAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGATTGGGTACAGTGGCGTGTTCTAGTTGGTTCCGGGCTTaGGCCATCTCCAGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: QRGCCASRRGRLGTVACSSWFRA*AISSSD
Trigger: ATCAGAGCTGGAGATGGCCAAAGCCCGGAACCAACT...AGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS GCA 90 bp TGGGAGCCTCTAGTCAGCTGGCTGGGACCCTGCCACCTTACCTTTTaGCAGTGGCTGCGATGGAGCAGTCCTTATTGTGGGTGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: WEPLVSWLGPCHLTF*QWLRWSSPYCGCLR
Trigger: CCTCAGACACCCACAATAAGGACTGCTCCATCGCAGCCACTGGCAAAAGGTAAGGTGGCAGGGTCCCAGCCAGCTGACTAGAGGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592871.1
CDS GCA 90 bp TGCCTCCGTAGTCTCCCAGCTTTAGGTCCCACCCACCTGGGGCTTTaGTTCCGGAAACAAACCATCTACCCCCTAGCTTCCTGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CLRSLPALGPTHLGL*FRKQTIYPLASWEV
Trigger: CACCTCCCAGGAAGCTAGGGGGTAGATGGTTTGTTTCCGGAAGCAAAGCCCCAGGTGGGTGGGACCTAAAGCTGGGAGACTACGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS CCA 90 bp GAAGGTGGCAGGCAACGCTCGCTGCCTGATACAGCGATTGTCAGGTaGGCTTCAGGGAAAAGTCGTGCAGTCCCCTTTCCGCGATACTCC +
Preference number: 5 (lower is better)
Translates to: EGGRQRSLPDTAIVR*ASGKSRAVPFPRYS
Trigger: GGAGTATCGCGGAAAGGGGACTGCACGACTTTTCCCTGAAGCCCACCTGACAATCGCTGTATCAGGCAGCGAGCGTTGCCTGCCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS CCA 90 bp AGGCAGCCTGATTTCTCCACTTTCACCTTCACAGGGAACATGGTTTaGGTCCGGGATCTGGCTAGCTGGGTCAGAGGCGCCCCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: RQPDFSTFTFTGNMV*VRDLASWVRGAPKG
Trigger: GCCCTTTGGGGCGCCTCTGACCCAGCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGTGAAGGTGAAAGTGGAGAAATCAGGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591076.1
CDS-3UTR CAA 90 bp ACACATCACGACTCTTGCTGTTGGTTACCTCTGAGCCCTGGGGACACAAGGGCCTCCAGGCGCGGCAGATaGGGTACAGTGGCGTGTTCT +
Preference number: 5 (lower is better)
Translates to: THHDSCCWLPLSPGDTRASRRGR*GTVACS
Trigger: AGAACACGCCACTGTACCCAATCTGCCGCGCCTGGA...GGCCCTTGTGTCCCCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CAA 90 bp ACACATCACGACTCTTGCTGTTGGTTACCTCTGAGCCCTGGGGACACAAGGGCCCTAGCCCCTCGGCTCTaGGGAACCCCTGATCTTGGA +
Preference number: 5 (lower is better)
Translates to: THHDSCCWLPLSPGDTRALAPRL*GTPDLG
Trigger: TCCAAGATCAGGGGTTCCCAAGAGCCGAGGGGCTAG...GGCCCTTGTGTCCCCAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS TCA 90 bp TGTACAGGTGGAGTGGTCCGGGCCACGATGGAGGTAGCGCTGGGCTaGGCGGTCAGGGCTTGGATAAGGAAAGAAGTTACCAACCACGAA +
Preference number: 5 (lower is better)
Translates to: CTGGVVRATMEVALG*AVRAWIRKEVTNHE
Trigger: TTCGTGGTTGGTAACTTCTTTCCTTATCCAAGCCCTGACCGCTCAGCCCAGCGCTACCTCCATCGTGGCCCGGACCACTCCACCTGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS GCA 90 bp CTCCAGCTCGGCTCAGGATTCCCCATGTCCTACCACGCACGTCATTaGCCGAGCCACCCCATTCAATCTCAAAGCGACTTCAAGCGCACA +
Preference number: 5 (lower is better)
Translates to: LQLGSGFPMSYHARH*PSHPIQSQSDFKRT
Trigger: TGTGCGCTTGAAGTCGCTTTGAGATTGAATGGGGTGGCTCGGGCAATGACGTGCGTGGTAGGACATGGGGAATCCTGAGCCGAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS CCA 90 bp TCCAGCTCTGATTTCTCCACTTTCACCTTCACAGGGAACATGGTTTaGGTCCGGGATCTGGCTAGCTGGGTCAGAGGCGCCCCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: SSSDFSTFTFTGNMV*VRDLASWVRGAPKG
Trigger: GCCCTTTGGGGCGCCTCTGACCCAGCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGTGAAGGTGAAAGTGGAGAAATCAGAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301159.14
ENST00000587108.5
ENST00000590706.6
ENST00000592871.1
ENST00000595455.1
CDS-3UTR CAA 90 bp GGTCCTATATGTCTGTCCTGGGGACCCTTGTCTACCCCGCTGGGTCAGATGGCTCAAGACAGCATCCAGTaGGTTCCGGGCTTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: GPICLSWGPLSTPLGQMAQDSIQ*VPGFGH
Trigger: ATGGCCAAAGCCCGGAACCAACTGGATGCTGTCTTG...AGCCATCTGACCCAGCGGGGTAGACAAGGGTCCCCAGGACAGACATATAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CAA 90 bp CACCTCAACCAGCCAGCGGGTCAAGTGTGCCTGCCCCAGGGACCCCTGTCTTCTTACACATCACGACTCTaGCTGTTGGTTACCTCTGAG +
Preference number: 5 (lower is better)
Translates to: HLNQPAGQVCLPQGPLSSYTSRL*LLVTSE
Trigger: CTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTA...AGAAGACAGGGGTCCCTGGGGCAGGCACACTTGACCCGCTGGCTGGTTGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS CCA 90 bp CCATCTCCAGCTCTGATTTCTCCACTTTCACCTTCACAGGGAACATaGTTTGGGTCCGGGATCTGGCTAGCTGGGTCAGAGGCGCCCCAA +
Preference number: 5 (lower is better)
Translates to: PSPALISPLSPSQGT*FGSGIWLAGSEAPQ
Trigger: TTGGGGCGCCTCTGACCCAGCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGTGAAGGTGAAAGTGGAGAAATCAGAGCTGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301159.14
ENST00000587108.5
ENST00000590706.6
ENST00000592871.1
ENST00000595455.1
CDS CCA 90 bp CTGCCACCTTACCTTTTGCCAGTGGCTGCGATGGAGCAGTCCCTGTaGGGAAAGACAGTTGACCCTCAGACAAACGCCTGTGCAAAACCC +
Preference number: 5 (lower is better)
Translates to: LPPYLLPVAAMEQSL*GKTVDPQTNACAKP
Trigger: GGGTTTTGCACAGGCGTTTGTCTGAGGGTCAACTGTCTTTCCCCACAGGGACTGCTCCATCGCAGCCACTGGCAAAAGGTAAGGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS-3UTR CAA 90 bp AGATGGCTTATAGACTCCCATCCATTCCTGCCCAGCCCCTGCTCCTCAAGGCCTTTGATCACATATGTGTaGGATCGCTGCGGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: RWLIDSHPFLPSPCSSRPLITYV*DRCGPP
Trigger: GGGAGGGCCGCAGCGATCCAACACATATGTGATCAA...AGGCCTTGAGGAGCAGGGGCTGGGCAGGAATGGATGGGAGTCTATAAGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CAA 90 bp GTGGGTGGCGGCAGCTTGTACACATCACGACTCTTGCTGTTGGTTACCTCTGAGGTGGGTGGCGGCAGCTaGTACACATCACGACTCTTG +
Preference number: 5 (lower is better)
Translates to: VGGGSLYTSRLLLLVTSEVGGGS*YTSRLL
Trigger: CAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCAC...CTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CAA 90 bp CTACACCTGTCAGCCCAGGGAGTCGCGTCTGCCTGCCTCAGGGAATCCTGTCTACTCCGGTCGAACAGCTaGATCACATATGTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: LHLSAQGVASACLRESCLLRSNS*ITYVLD
Trigger: ATCCAACACATATGTGATCAAGCTGTTCGACCGGAG...TAGACAGGATTCCCTGAGGCAGGCAGACGCGACTCCCTGGGCTGACAGGTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS-3UTR CAA 90 bp AACGAAGCTGGTTCCGATGAGAGGCCTCCTTCCACCTCTGGCGGATGCGTTTCCTGTCAGGATCACTTATaGTGGGTGTCTGAGGGTGTT +
Preference number: 5 (lower is better)
Translates to: NEAGSDERPPSTSGGCVSCQDHL*WVSEGV
Trigger: AACACCCTCAGACACCCACAATAAGTGATCCTGACA...GGAAACGCATCCGCCAGAGGTGGAAGGAGGCCTCTCATCGGAACCAGCTTCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS TCA 90 bp AGTAGCTTGTTCCTATTAGTTATTGCAGCCGTCAATCTCGCATCCTaGCCAATTGAGAGCTGCCTCCGTAGTCTCCCAGCTTTAGGTCCC +
Preference number: 5 (lower is better)
Translates to: SSLFLLVIAAVNLAS*PIESCLRSLPALGP
Trigger: GGGACCTAAAGCTGGGAGACTACGGAGGCAGCTCTCAATTGGTCAGGATGCGAGATTGACGGCTGCAATAACTAATAGGAACAAGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS CCA 90 bp CACGAACTCTCAACTCCAAATCCAATCAGAAAAACTCACTTATTGTaGGTGTCTGAGGGTGTTTTCCCAGCTTCCTCATCCAGACGCTCC +
Preference number: 5 (lower is better)
Translates to: HELSTPNPIRKTHLL*VSEGVFPASSSRRS
Trigger: GGAGCGTCTGGATGAGGAAGCTGGGAAAACACCCTCAGACACCCACAATAAGTGAGTTTTTCTGATTGGATTTGGAGTTGAGAGTTCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS CCA 72 bp GGGTCCTCCGCCTTTGGTTGTGTCCAGCCTGGACCGTaGCCACCACCCTTCTGTGGGCGGGCCCCTTCGGCA +
Preference number: 6 (lower is better)
Translates to: GSSAFGCVQPGP*PPPFCGRAPSA
Trigger: TGCCGAAGGGGCCCGCCCACAGAAGGGTGGTGGCCACGGTCCAGGCTGGACACAACCAAAGGCGGAGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS GCA 72 bp TCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTaGGTAGGGAGAGGGAGTGTCAGGACTGGGGTAGGA +
Preference number: 6 (lower is better)
Translates to: SSSAGGGSGQMA*VGRGSVRTGVG
Trigger: TCCTACCCCAGTCCTGACACTCCCTCTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587108.5
ENST00000592871.1
CDS CCA 72 bp AGCAGTTGCAAAGGGCCCTACGAGGGGCAAGCAGGCTaGGGGACGCTCACCTCTGGCGGATGCGTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSCKGPYEGQAG*GTLTSGGCVSS
Trigger: GCTGGAAACGCATCCGCCAGAGGTGAGCGTCCCCCAGCCTGCTTGCCCCTCGTAGGGCCCTTTGCAACTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587108.5
ENST00000590890.1
CDS CAA 72 bp GATGAGCTTCGTGGGCCACGGGTCCTCCGCCTTTGGTaGTGTCCAGCCTGGACCGTGGCCACCACCCTTCTG +
Preference number: 6 (lower is better)
Translates to: DELRGPRVLRLW*CPAWTVATTLL
Trigger: CAGAAGGGTGGTGGCCACGGTCCAGGCTGGACACAACCAAAGGCGGAGGACCCGTGGCCCACGAAGCTCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS CAA 90 bp GGCCCCGGGGGTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTaGCTGTTGGTTACCTCTGAGCCCTCCTCATCCTCAGGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: GPGGVGGGSLYTSRL*LLVTSEPSSSSGSG
Trigger: CCCGCTGCCTGAGGATGAGGAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301159.14
ENST00000587108.5
CDS CAA 90 bp CTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTaGTACACATCACGACTCTTGCTGTTGGTTACCTCTGAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LQASPGGPGGVGGGS*YTSRLLLLVTSEPS
Trigger: GGAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301159.14
ENST00000587108.5
CDS CAA 90 bp CAGTTCAAAGATGAGCTTCGTGGGCCACGGGTCCTCCGCCTTTGGTaGTGTCCAGCCTGGACCGTGGCCACCACCCTTCTGTGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: QFKDELRGPRVLRLW*CPAWTVATTLLWAG
Trigger: GCCCGCCCACAGAAGGGTGGTGGCCACGGTCCAGGCTGGACACAACCAAAGGCGGAGGACCCGTGGCCCACGAAGCTCATCTTTGAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS GCA 72 bp CGACCCTCTAGGGCCACTGTCTACTCACTGGATCGCTaGGGCCCTCCCTCAGCCAGCCCATCATCCATCTCC +
Preference number: 6 (lower is better)
Translates to: RPSRATVYSLDR*GPPSASPSSIS
Trigger: GGAGATGGATGATGGGCTGGCTGAGGGAGGGCCGCAGCGATCCAGTGAGTAGACAGTGGCCCTAGAGGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592871.1
CDS CCA 72 bp GCCAGAGGGGCTGTTGCGCATCCAGGCGCGGCAGATTaGGTACAGTGGCGTGTTCTCGCTGAACTGGGCCAA +
Preference number: 6 (lower is better)
Translates to: ARGAVAHPGAAD*VQWRVLAELGQ
Trigger: TTGGCCCAGTTCAGCGAGAACACGCCACTGTACCCAATCTGCCGCGCCTGGATGCGCAACAGCCCCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591163.1
CDS CAA 90 bp CTGCAGGCATCTCCGGGTGGCCCCGGGGGTGTGGGTGGCGGCAGCTaGTACACATCACGACTCTTGCTGTTGGTTACCTCTGAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: LQASPGGPGGVGGGS*YTSRLLLLVTSEPE
Trigger: CTCTGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591163.1
CDS GCA 72 bp CACCGGGAGGGTGTGAAGGTGGCAGGCAACGCTCGCTaGCTGATACAGCGATTGTCAGGTGGGCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: HREGVKVAGNAR*LIQRLSGGLQG
Trigger: TCCCTGAAGCCCACCTGACAATCGCTGTATCAGGCAGCGAGCGTTGCCTGCCACCTTCACACCCTCCCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS CCA 72 bp AAAGATGAGCTTCGTGGGCCACGGGTCCTCCGCCTTTaGTTGTGTCCAGCCTGGACCGTGGCCACCACCCTT +
Preference number: 6 (lower is better)
Translates to: KDELRGPRVLRL*LCPAWTVATTL
Trigger: AAGGGTGGTGGCCACGGTCCAGGCTGGACACAACCAAAGGCGGAGGACCCGTGGCCCACGAAGCTCATCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS TCA 72 bp GGAGTGGTCCGGGCCACGATGGAGGTAGCGCTGGGCTaGGCGGTCAGGGCTTGGATAAGGAAAGAAGTTACC +
Preference number: 6 (lower is better)
Translates to: GVVRATMEVALG*AVRAWIRKEVT
Trigger: GGTAACTTCTTTCCTTATCCAAGCCCTGACCGCTCAGCCCAGCGCTACCTCCATCGTGGCCCGGACCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS GCA 72 bp CTAGTCAGCTGGCTGGGACCCTGCCACCTTACCTTTTaGCAGTGGCTGCGATGGAGCAGTCCCTGTGGGGAA +
Preference number: 6 (lower is better)
Translates to: LVSWLGPCHLTF*QWLRWSSPCGE
Trigger: TTCCCCACAGGGACTGCTCCATCGCAGCCACTGGCAAAAGGTAAGGTGGCAGGGTCCCAGCCAGCTGACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS CCA 72 bp ACAGGGAACATGGTTTGGGTCCGGGATCTGGCTAGCTaGGTCAGAGGCGCCCCAAAGGGCCTAGGGTCACAA +
Preference number: 6 (lower is better)
Translates to: TGNMVWVRDLAS*VRGAPKGLGSQ
Trigger: TTGTGACCCTAGGCCCTTTGGGGCGCCTCTGACCCAGCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301159.14
ENST00000587108.5
ENST00000590706.6
ENST00000591076.1
ENST00000592871.1
ENST00000595455.1
CDS CCA 72 bp CCATCATCCATCTCCCTCCTCTTCTTCCTCCGCTGGTaGGGGAAGCGGGCAGATGGCCTTTTGCCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: PSSISLLFFLRW*GKRADGLLPVA
Trigger: AGCCACTGGCAAAAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAGGGAGATGGATGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301159.14
ENST00000590706.6
CDS CCA 72 bp AGCCCATCATCCATCTCCCTCCTCTTCTTCCTCCGCTaGTGGGGGAAGCGGGCAGATGGCCTTTTGCCAGTG +
Preference number: 6 (lower is better)
Translates to: SPSSISLLFFLR*WGKRADGLLPV
Trigger: CACTGGCAAAAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGAAGAGGAGGGAGATGGATGATGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301159.14
ENST00000590706.6
CDS CCA 72 bp TTGTGTCCAGCCTGGACCGTGGCCACCACCCTTCTGTaGGCGGGCCCCTTCGGCAGTAGCTTGTTCCTATTA +
Preference number: 6 (lower is better)
Translates to: LCPAWTVATTLL*AGPFGSSLFLL
Trigger: TAATAGGAACAAGCTACTGCCGAAGGGGCCCGCCCACAGAAGGGTGGTGGCCACGGTCCAGGCTGGACACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS TCA 72 bp AAGTCAAGGCGGGAGAAGGCGGGGACAGTTCAAAGATaGGCTTCGTGGGCCACGGGTCCTCCGCCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: KSRREKAGTVQR*ASWATGPPPLV
Trigger: AACCAAAGGCGGAGGACCCGTGGCCCACGAAGCTCATCTTTGAACTGTCCCCGCCTTCTCCCGCCTTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301159.14
ENST00000587108.5
ENST00000590706.6
ENST00000591076.1
CDS GCA 72 bp TCTTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTaGGTAGGGAGAGGGAGTGTCAGGATCACTTATTGT +
Preference number: 6 (lower is better)
Translates to: SSSAGGGSGQMA*VGRGSVRITYC
Trigger: ACAATAAGTGATCCTGACACTCCCTCTCCCTACGCAGGCCATCTGCCCGCTTCCCCCACCAGCGGAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS CAA 90 bp TCTCCAGCTCGGCTCAGGATTCCCCATGTCCTACCACGCACGTCATaGCCCGAGCCACCCCATTCAATCTCAAAGCGACTTCAAGCGCAC +
Preference number: 6 (lower is better)
Translates to: SPARLRIPHVLPRTS*PEPPHSISKRLQAH
Trigger: GTGCGCTTGAAGTCGCTTTGAGATTGAATGGGGTGGCTCGGGCAATGACGTGCGTGGTAGGACATGGGGAATCCTGAGCCGAGCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS GCA 72 bp CTAGTCAGCTGGCTGGGACCCTGCCACCTTACCTTTTaGCAGTGGCTGCGATGGAGCAGTCCTTATTGTGGG +
Preference number: 6 (lower is better)
Translates to: LVSWLGPCHLTF*QWLRWSSPYCG
Trigger: CCCACAATAAGGACTGCTCCATCGCAGCCACTGGCAAAAGGTAAGGTGGCAGGGTCCCAGCCAGCTGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592871.1
CDS GCA 72 bp GTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTTaGTGTTGGTTACCTCTGAGCCAGAGGGGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: VWVAAACTHHDS*CWLPLSQRGCC
Trigger: GCAACAGCCCCTCTGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591163.1
CDS CCA 72 bp GTGGCGGCAGCTTGTACACATCACGACTCTTGCTGTTaGTTACCTCTGAGCCCTCCTCATCCTCAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: VAAACTHHDSCC*LPLSPPHPQAA
Trigger: CGCTGCCTGAGGATGAGGAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301159.14
ENST00000587108.5
CDS CCA 72 bp AGCTGGCTGGGACCCTGCCACCTTACCTTTTGCCAGTaGCTGCGATGGAGCAGTCCTTATTGTGGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: SWLGPCHLTFCQ*LRWSSPYCGCL
Trigger: CAGACACCCACAATAAGGACTGCTCCATCGCAGCCACTGGCAAAAGGTAAGGTGGCAGGGTCCCAGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592871.1
CDS CCA 72 bp GGATGGGAGGTGTGTGAGCATCCTTGCATAGGCCCTTaGCTCCTTACCGACCCTCTAGGGCCACTGTCTACT +
Preference number: 6 (lower is better)
Translates to: GWEVCEHPCIGP*LLTDPLGPLST
Trigger: AGTAGACAGTGGCCCTAGAGGGTCGGTAAGGAGCCAAGGGCCTATGCAAGGATGCTCACACACCTCCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592871.1
CDS CCA 72 bp GTGGCGGCAGCTTGTACACATCACGACTCTTGCTGTTaGTTACCTCTGAGCCAGAGGGGCTGTTGCGCATCC +
Preference number: 6 (lower is better)
Translates to: VAAACTHHDSCC*LPLSQRGCCAS
Trigger: GGATGCGCAACAGCCCCTCTGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591163.1
CDS CCA 72 bp AGGCAACGCTCGCTGCCTGATACAGCGATTGTCAGGTaGGCTTCAGGGAAAAGTCGTGCAGTCCCCTTTCCG +
Preference number: 6 (lower is better)
Translates to: RQRSLPDTAIVR*ASGKSRAVPFP
Trigger: CGGAAAGGGGACTGCACGACTTTTCCCTGAAGCCCACCTGACAATCGCTGTATCAGGCAGCGAGCGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS CAA 72 bp GGTGGCGGCAGCTTGTACACATCACGACTCTTGCTGTaGGTTACCTCTGAGCCCTCCTCATCCTCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: GGGSLYTSRLLL*VTSEPSSSSGS
Trigger: GCTGCCTGAGGATGAGGAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301159.14
ENST00000587108.5
CDS CAA 72 bp GGTGGCGGCAGCTTGTACACATCACGACTCTTGCTGTaGGTTACCTCTGAGCCAGAGGGGCTGTTGCGCATC +
Preference number: 6 (lower is better)
Translates to: GGGSLYTSRLLL*VTSEPEGLLRI
Trigger: GATGCGCAACAGCCCCTCTGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591163.1
CDS CAA 90 bp GGTCCGGGCCACGATGGAGGTAGCGCTGGGCTGAGCGGTCAGGGCTaGGATAAGGAAAGAAGTTACCAACCACGAACTCTCAACTCCAAA +
Preference number: 6 (lower is better)
Translates to: GPGHDGGSAGLSGQG*DKERSYQPRTLNSK
Trigger: TTTGGAGTTGAGAGTTCGTGGTTGGTAACTTCTTTCCTTATCCAAGCCCTGACCGCTCAGCCCAGCGCTACCTCCATCGTGGCCCGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS TCA 72 bp CTGCAGAGGGCACCCTGGGGATACTGGTATCAAACCTaGGATGCTCACATGAACCCCACTTGCCTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LQRAPWGYWYQT*DAHMNPTCLLG
Trigger: GCCCAAGAGGCAAGTGGGGTTCATGTGAGCATCTCAGGTTTGATACCAGTATCCCCAGGGTGCCCTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS GCA 72 bp GTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTTaGTGTTGGTTACCTCTGAGCCCTCCTCATCCTCAG +
Preference number: 6 (lower is better)
Translates to: VWVAAACTHHDS*CWLPLSPPHPQ
Trigger: CTGAGGATGAGGAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301159.14
ENST00000587108.5
CDS GCA 72 bp AGTCTCCCAGCTTTAGGTCCCACCCACCTGGGGCTTTaGTTCCGGAAACAAACCATCTACCCCCTAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SLPALGPTHLGL*FRKQTIYPLAS
Trigger: GGAAGCTAGGGGGTAGATGGTTTGTTTCCGGAAGCAAAGCCCCAGGTGGGTGGGACCTAAAGCTGGGAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS GCA 72 bp GGCTCAGGATTCCCCATGTCCTACCACGCACGTCATTaGCCGAGCCACCCCATTCAATCTCAAAGCGACTTC +
Preference number: 6 (lower is better)
Translates to: GSGFPMSYHARH*PSHPIQSQSDF
Trigger: GAAGTCGCTTTGAGATTGAATGGGGTGGCTCGGGCAATGACGTGCGTGGTAGGACATGGGGAATCCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS CCA 72 bp GATTTCTCCACTTTCACCTTCACAGGGAACATGGTTTaGGTCCGGGATCTGGCTAGCTGGGTCAGAGGCGCC +
Preference number: 6 (lower is better)
Translates to: DFSTFTFTGNMV*VRDLASWVRGA
Trigger: GGCGCCTCTGACCCAGCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGTGAAGGTGAAAGTGGAGAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301159.14
ENST00000587108.5
ENST00000590706.6
ENST00000591076.1
ENST00000592871.1
ENST00000595455.1
CDS CAA 72 bp GGTGTGGGTGGCGGCAGCTTGTACACATCACGACTCTaGCTGTTGGTTACCTCTGAGCCCTCCTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: GVGGGSLYTSRL*LLVTSEPSSSS
Trigger: TGAGGATGAGGAGGGCTCAGAGGTAACCAACAGCAAGAGTCGTGATGTGTACAAGCTGCCGCCACCCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301159.14
ENST00000587108.5
CDS CAA 72 bp GATGCTCACATGAACCCCACTTGCCTCTTGGGCCTTTaGTCCCACCCATACCCATGGGGGTCTAGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: DAHMNPTCLLGL*SHPYPWGSRWQ
Trigger: TTGCCACCTAGACCCCCATGGGTATGGGTGGGACAAAAGGCCCAAGAGGCAAGTGGGGTTCATGTGAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS CAA 72 bp TGGCTGCGATGGAGCAGTCCCTGTGGGGAAAGACAGTaGACCCTCAGACAAACGCCTGTGCAAAACCCTGCA +
Preference number: 6 (lower is better)
Translates to: WLRWSSPCGERQ*TLRQTPVQNPA
Trigger: TGCAGGGTTTTGCACAGGCGTTTGTCTGAGGGTCAACTGTCTTTCCCCACAGGGACTGCTCCATCGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS CAA 72 bp CGGCTCAGGATTCCCCATGTCCTACCACGCACGTCATaGCCCGAGCCACCCCATTCAATCTCAAAGCGACTT +
Preference number: 6 (lower is better)
Translates to: RLRIPHVLPRTS*PEPPHSISKRL
Trigger: AAGTCGCTTTGAGATTGAATGGGGTGGCTCGGGCAATGACGTGCGTGGTAGGACATGGGGAATCCTGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS CAA 72 bp AGACACTGCAAGACAGCATCCAGTTGGTTCCGGGCTTaGGCCATCTCCAGCTCGGCTCAGGATTCCCCATGT +
Preference number: 6 (lower is better)
Translates to: RHCKTASSWFRA*AISSSAQDSPC
Trigger: ACATGGGGAATCCTGAGCCGAGCTGGAGATGGCCAAAGCCCGGAACCAACTGGATGCTGTCTTGCAGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS CAA 72 bp ACTCTTCTCCAGCAGACACTGCAAGACAGCATCCAGTaGGTTCCGGGCTTTGGCCATCTCCAGCTCGGCTCA +
Preference number: 6 (lower is better)
Translates to: TLLQQTLQDSIQ*VPGFGHLQLGS
Trigger: TGAGCCGAGCTGGAGATGGCCAAAGCCCGGAACCAACTGGATGCTGTCTTGCAGTGTCTGCTGGAGAAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587751.1
CDS TCA 72 bp AGTGGCTGCGATGGAGCAGTCCTTATTGTGGGTGTCTaGGGGTGTTTTCCCAGCTTCCTCATCCAGACGCTC +
Preference number: 6 (lower is better)
Translates to: SGCDGAVLIVGV*GCFPSFLIQTL
Trigger: GAGCGTCTGGATGAGGAAGCTGGGAAAACACCCTCAGACACCCACAATAAGGACTGCTCCATCGCAGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301159.14
ENST00000590706.6
ENST00000592871.1
CDS CCA 72 bp TACCTTTTGCCAGTGGCTGCGATGGAGCAGTCCCTGTaGGGAAAGACAGTTGACCCTCAGACAAACGCCTGT +
Preference number: 6 (lower is better)
Translates to: YLLPVAAMEQSL*GKTVDPQTNAC
Trigger: ACAGGCGTTTGTCTGAGGGTCAACTGTCTTTCCCCACAGGGACTGCTCCATCGCAGCCACTGGCAAAAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS CAA 72 bp ACCACCCTTCTGTGGGCGGGCCCCTTCGGCAGTAGCTaGTTCCTATTAGTTATTGCAGCCGTCAATCTCGCA +
Preference number: 6 (lower is better)
Translates to: TTLLWAGPFGSS*FLLVIAAVNLA
Trigger: TGCGAGATTGACGGCTGCAATAACTAATAGGAACAAGCTACTGCCGAAGGGGCCCGCCCACAGAAGGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS CAA 72 bp CACGATGGAGGTAGCGCTGGGCTGAGCGGTCAGGGCTaGGATAAGGAAAGAAGTTACCAACCACGAACTCTC +
Preference number: 6 (lower is better)
Translates to: HDGGSAGLSGQG*DKERSYQPRTL
Trigger: GAGAGTTCGTGGTTGGTAACTTCTTTCCTTATCCAAGCCCTGACCGCTCAGCCCAGCGCTACCTCCATCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS TCA 72 bp GGAGAGGGAGTGTCAGGATCACTTATTGTGGGTGTCTaGGGGTGTTTTCCCAGCTTCCTCATCCAGACGCTC +
Preference number: 6 (lower is better)
Translates to: GEGVSGSLIVGV*GCFPSFLIQTL
Trigger: GAGCGTCTGGATGAGGAAGCTGGGAAAACACCCTCAGACACCCACAATAAGTGATCCTGACACTCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595455.1
CDS GCA 72 bp ACAGTTGACCCTCAGACAAACGCCTGTGCAAAACCCTaGAGAGGGCACCCTGGGGATACTGGTATCAAACCT +
Preference number: 6 (lower is better)
Translates to: TVDPQTNACAKP*RGHPGDTGIKP
Trigger: AGGTTTGATACCAGTATCCCCAGGGTGCCCTCTGCAGGGTTTTGCACAGGCGTTTGTCTGAGGGTCAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS CCA 72 bp GCTCTGATTTCTCCACTTTCACCTTCACAGGGAACATaGTTTGGGTCCGGGATCTGGCTAGCTGGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: ALISPLSPSQGT*FGSGIWLAGSE
Trigger: CTCTGACCCAGCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGTGAAGGTGAAAGTGGAGAAATCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301159.14
ENST00000587108.5
ENST00000590706.6
ENST00000592871.1
ENST00000595455.1
CDS CCA 72 bp CTCTTCTCCAGCAGACACTGCAAGACAGCATCCAGTTaGTTCCGGGCTTTGGCCATCTCCAGCTCTGATTTC +
Preference number: 6 (lower is better)
Translates to: LFSSRHCKTASS*FRALAISSSDF
Trigger: GAAATCAGAGCTGGAGATGGCCAAAGCCCGGAACCAACTGGATGCTGTCTTGCAGTGTCTGCTGGAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301159.14
ENST00000587108.5
ENST00000590706.6
ENST00000592871.1
ENST00000595455.1
CDS CCA 72 bp AGCCTGATTTCTCCACTTTCACCTTCACAGGGAACATaGTTTGGGTCCGGGATCTGGCTAGCTGGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: SLISPLSPSQGT*FGSGIWLAGSE
Trigger: CTCTGACCCAGCTAGCCAGATCCCGGACCCAAACCATGTTCCCTGTGAAGGTGAAAGTGGAGAAATCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591076.1
CDS CAA 72 bp CTGGTATCAAACCTGAGATGCTCACATGAACCCCACTaGCCTCTTGGGCCTTTTGTCCCACCCATACCCATG +
Preference number: 6 (lower is better)
Translates to: LVSNLRCSHEPH*PLGPFVPPIPM
Trigger: CATGGGTATGGGTGGGACAAAAGGCCCAAGAGGCAAGTGGGGTTCATGTGAGCATCTCAGGTTTGATACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS TCA 72 bp TTCCTATTAGTTATTGCAGCCGTCAATCTCGCATCCTaGCCAATTGAGAGCTGCCTCCGTAGTCTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: FLLVIAAVNLAS*PIESCLRSLPA
Trigger: AGCTGGGAGACTACGGAGGCAGCTCTCAATTGGTCAGGATGCGAGATTGACGGCTGCAATAACTAATAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590706.6
CDS CAA 90 bp AACCACGAACTCTCAACTCCAAATCCAATCAGAAAAACTCACTTATaGTGGGTGTCTGAGGGTGTTTTCCCAGCTTCCTCATCCAGACGC +
Preference number: 6 (lower is better)
Translates to: NHELSTPNPIRKTHL*WVSEGVFPASSSRR
Trigger: GCGTCTGGATGAGGAAGCTGGGAAAACACCCTCAGACACCCACAATAAGTGAGTTTTTCTGATTGGATTTGGAGTTGAGAGTTCGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587108.5
CDS CCA 72 bp TCAACTCCAAATCCAATCAGAAAAACTCACTTATTGTaGGTGTCTGAGGGTGTTTTCCCAGCTTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: STPNPIRKTHLL*VSEGVFPASSS
Trigger: GGATGAGGAAGCTGGGAAAACACCCTCAGACACCCACAATAAGTGAGTTTTTCTGATTGGATTTGGAGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587108.5