Pregenerated sensors for LIMS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000169756Ensembl transcript IDs: ENST00000332345.10, ENST00000338045.7, ENST00000393310.5, ENST00000409441.5, ENST00000410093.5, ENST00000422797.5, ENST00000544547.5
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACAGCAATGGAACCTCTGGCTGCAGGAGATGCCTGGGTATGCCTaGTATGTAAACAAACACAAGCAGTCGAGTTCAGGCCATGCATCT | + |
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Preference number: 1 (lower is better) Translates to: RQQWNLWLQEMPGYA*YVNKHKQSSSGHAS Trigger: AGATGCATGGCCTGAACTCGACTGCTTGTGTTTGTTTACATATCAGGCATACCCAGGCATCTCCTGCAGCCAGAGGTTCCATTGCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR TCA 90 bp | CATAGGAAAATGCTCTTATTCTCAGGAGACGCATACTGGGACTCATaGGAAATTTTAGAGGTATGCGTATACAGGCACACGTGCACACAT | + |
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Preference number: 1 (lower is better) Translates to: HRKMLLFSGDAYWDS*EILEVCVYRHTCTH Trigger: ATGTGTGCACGTGTGCCTGTATACGCATACCTCTAAAATTTCTCATGAGTCCCAGTATGCGTCTCCTGAGAATAAGAGCATTTTCCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422797.5 |
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| 3UTR TCA 90 bp | GTAAATGCTTGTTTTTCTCCTCCATATTTCTCGTGTAGAGGTATATaGGAATTTAGCATCAAGACGCTATACTGCAAACCCTGTTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: VNACFSPPYFSCRGI*EFSIKTLYCKPCSV Trigger: CACAGAACAGGGTTTGCAGTATAGCGTCTTGATGCTAAATTCTCATATACCTCTACACGAGAAATATGGAGGAGAAAAACAAGCATTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR TCA 90 bp | TTTAATAAATACTCCCAAGGTTGTCATTGCTGGTCACATATTAGCTaGCAAAGGCACACTGAAGGGACTTTGATTCTTACTGTAAAATGC | + |
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Preference number: 1 (lower is better) Translates to: FNKYSQGCHCWSHIS*QRHTEGTLILTVKC Trigger: GCATTTTACAGTAAGAATCAAAGTCCCTTCAGTGTGCCTTTGTCAGCTAATATGTGACCAGCAATGACAACCTTGGGAGTATTTATTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR TCA 90 bp | GTAAACAAACACAAGCAGTCGAGTTCAGGCCATGCATCTTCAAAGTaGCGAAGAATATATGTAAATGCTTGTTTTTCTCCTCCATATTTC | + |
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Preference number: 1 (lower is better) Translates to: VNKHKQSSSGHASSK*RRIYVNACFSPPYF Trigger: GAAATATGGAGGAGAAAAACAAGCATTTACATATATTCTTCGTCACTTTGAAGATGCATGGCCTGAACTCGACTGCTTGTGTTTGTTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR GCA 90 bp | GTATGCCTGATATGTAAACAAACACAAGCAGTCGAGTTCAGGCCATaGATCTTCAAAGTGACGAAGAATATATGTAAATGCTTGTTTTTC | + |
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Preference number: 1 (lower is better) Translates to: VCLICKQTQAVEFRP*IFKVTKNICKCLFF Trigger: GAAAAACAAGCATTTACATATATTCTTCGTCACTTTGAAGATGCATGGCCTGAACTCGACTGCTTGTGTTTGTTTACATATCAGGCATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCGATCTCCTGACCTCGTaGTCCACCTGCCTCGACCTC | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTDLLTS*STCLDL Trigger: GAGGTCGAGGCAGGTGGATCACGAGGTCAGGAGATC...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR CCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCCAGCAATGGAACCTCTaGCTGCAGGAGATGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTQQWNL*LQEMPG Trigger: CCCAGGCATCTCCTGCAGCCAGAGGTTCCATTGCTG...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCATGGTCTTGATCTCCTaGCCTCGTGATCCACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTMVLIS*PRDPPA Trigger: GGCAGGTGGATCACGAGGTCAGGAGATCAAGACCAT...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR GCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCTCTGGCTGCAGGAGATaGCTGGGTATGCCTGATATG | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTSGCRR*LGMPDM Trigger: CATATCAGGCATACCCAGGCATCTCCTGCAGCCAGA...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR GCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCAATGGAACCTCTGGCTaGAGGAGATGCCTGGGTATG | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTNGTSG*RRCLGM Trigger: CATACCCAGGCATCTCCTGCAGCCAGAGGTTCCATT...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR CCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCGAGCAAAGACAGCAATaGAACCTCTGGCTGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTEQRQQ*NLWLQE Trigger: CTCCTGCAGCCAGAGGTTCCATTGCTGTCTTTGCTC...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCTGGTCACATATTAGCTaGCAAAGGCACACTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTWSHIS*QRHTEG Trigger: CCCTTCAGTGTGCCTTTGTCAGCTAATATGTGACCA...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR GCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCAGGTGTGAGGCACCGTaGCTGTCCACTAATTCATAT | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTRCEAP*LSTNSY Trigger: ATATGAATTAGTGGACAGGCACGGTGCCTCACACCT...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCCTGACAAAGGCACACTaGAGGGACTTTGATTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTLTKAH*RDFDSY Trigger: GTAAGAATCAAAGTCCCTTCAGTGTGCCTTTGTCAG...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCATGCCTGGGTATGCCTaGTATGTAAACAAACACAAG | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTMPGYA*YVNKHK Trigger: CTTGTGTTTGTTTACATATCAGGCATACCCAGGCAT...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR GCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCATCAAGACGCTATACTaGAAACCCTGTTCTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTIKTLY*KPCSVL Trigger: CAACACAGAACAGGGTTTGCAGTATAGCGTCTTGAT...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCTACAGCTGTGGTAAATaGATCTGGGTTTACCAATCT | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTYSCGK*IWVYQS Trigger: AGATTGGTAAACCCAGATTCATTTACCACAGCTGTA...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCGTTATAAAGGCAATATaGCCGACATACACATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTVIKAI*PTYTFS Trigger: ACTGAATGTGTATGTCGGTCATATTGCCTTTATAAC...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCAAGGCAAGGCAAGTTTaGGTATGTATAAAGCATAGA | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTKARQV*VCIKHR Trigger: TCTATGCTTTATACATACTCAAACTTGCCTTGCCTT...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR-3UTR CCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCGCACTTAGTTTTAGTTaGTATTCTGTGAGATGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LVETGFHLVSQDSLDLLTALSFS*YSVRWL Trigger: TAGCCATCTCACAGAATACCAACTAAAACTAAGTGC...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR CAA 90 bp | AAGGACATCCTACAGCTAGCTATTACTACTGCGTTAAGTAATCATTaGAAGGAAGAATTCACAAGGAGAGCAGGTTATAAAACTAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: KDILQLAITTALSNH*KEEFTRRAGYKTKH Trigger: ATGCTTAGTTTTATAACCTGCTCTCCTTGTGAATTCTTCCTTCAAATGATTACTTAACGCAGTAGTAATAGCTAGCTGTAGGATGTCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR TCA 72 bp | TGGAACCTCTGGCTGCAGGAGATGCCTGGGTATGCCTaGTATGTAAACAAACACAAGCAGTCGAGTTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: WNLWLQEMPGYA*YVNKHKQSSSG Trigger: GCCTGAACTCGACTGCTTGTGTTTGTTTACATATCAGGCATACCCAGGCATCTCCTGCAGCCAGAGGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR CCA 72 bp | AAGACAGCAATGGAACCTCTGGCTGCAGGAGATGCCTaGGTATGCCTGATATGTAAACAAACACAAGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: KTAMEPLAAGDA*VCLICKQTQAV Trigger: GACTGCTTGTGTTTGTTTACATATCAGGCATACCCAGGCATCTCCTGCAGCCAGAGGTTCCATTGCTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR TCA 72 bp | CACAAGCAGTCGAGTTCAGGCCATGCATCTTCAAAGTaGCGAAGAATATATGTAAATGCTTGTTTTTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: HKQSSSGHASSK*RRIYVNACFSP Trigger: AGGAGAAAAACAAGCATTTACATATATTCTTCGTCACTTTGAAGATGCATGGCCTGAACTCGACTGCTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR TCA 72 bp | TGTTTTTCTCCTCCATATTTCTCGTGTAGAGGTATATaGGAATTTAGCATCAAGACGCTATACTGCAAACCC | + |
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Preference number: 3 (lower is better) Translates to: CFSPPYFSCRGI*EFSIKTLYCKP Trigger: GGGTTTGCAGTATAGCGTCTTGATGCTAAATTCTCATATACCTCTACACGAGAAATATGGAGGAGAAAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| 3UTR GCA 72 bp | ATATGTAAACAAACACAAGCAGTCGAGTTCAGGCCATaGATCTTCAAAGTGACGAAGAATATATGTAAATGC | + |
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Preference number: 3 (lower is better) Translates to: ICKQTQAVEFRP*IFKVTKNICKC Trigger: GCATTTACATATATTCTTCGTCACTTTGAAGATGCATGGCCTGAACTCGACTGCTTGTGTTTGTTTACATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| CDS-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCCCTACGCACTCTACCTaGGCCACCTCCAGCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTPTHST*ATSSSP Trigger: AGGGGAGCTGGAGGTGGCTCAGGTAGAGTGCGTAGG...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393310.5 |
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| CDS-3UTR CCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCAGCCTCCCGAGTAGCTaGGACTACAAGCGCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTSLPSS*DYKRPP Trigger: TGGCGGGCGCTTGTAGTCCCAGCTACTCGGGAGGCT...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| CDS-3UTR CCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCTTGGCCATGTTGCTGTaGGTCATCCCGGCCGCCACG | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTLAMLL*VIPAAT Trigger: CGTGGCGGCCGGGATGACCCACAGCAACATGGCCAA...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544547.5 |
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| CDS-3UTR GCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCGCAATCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTAISAH*KLRLLG Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATTGC...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| CDS-3UTR GCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCTTCCCACCATTCTCCTaGCTCAGCCTCCCGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTFPPFS*LSLPSS Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGGTGGGAA...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| CDS-3UTR GCA 90 bp | GGTGAAACGAGAATGTGGACTGTATACACACAAGCATGGCAAAATGTCAACTGGGCTCAGCAGTGTGGCTaGCAGGGGAAAGCAGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GETRMWTVYTQAWQNVNWAQQCG*QGKAAS Trigger: GGACGCTGCTTTCCCCTGGCAGCCACACTGCTGAGC...CCAGTTGACATTTTGCCATGCTTGTGTGTATACAGTCCACATTCTCGTTTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422797.5 |
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| CDS-3UTR CCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCGCAAGCTCCGCCTCCTaGGTTCAAGCCATTCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTASSAS*VQAILL Trigger: TAGGAGAATGGCTTGAACCCAGGAGGCGGAGCTTGC...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| CDS-3UTR TCA 90 bp | GGTGAAACGAGAATGTGGACTGTATACACACAAGCATGGCAAAATGTCAACTGGAGGGTGAGGCTGCAGTaGGCTCTGATTGCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: GETRMWTVYTQAWQNVNWRVRLQ*ALIAHC Trigger: GCAGTGGGCAATCAGAGCTCACTGCAGCCTCACCCT...CCAGTTGACATTTTGCCATGCTTGTGTGTATACAGTCCACATTCTCGTTTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
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| CDS-3UTR CCA 90 bp | GGTGAAACGAGAATGTGGACTGTATACACACAAGCATGGCAAAATGTCAACTGGAGTTTGAGACCAGCCTaGGCAACGCAGCAAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GETRMWTVYTQAWQNVNWSLRPA*ATQQGS Trigger: GGAGCCTTGCTGCGTTGCCCAGGCTGGTCTCAAACT...CCAGTTGACATTTTGCCATGCTTGTGTGTATACAGTCCACATTCTCGTTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
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| CDS-3UTR GCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCGTCGAGTTCAGGCCATaGATCTTCAAAGTGACGAAG | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTVEFRP*IFKVTK Trigger: CTTCGTCACTTTGAAGATGCATGGCCTGAACTCGAC...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| CDS-3UTR CCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCGCTGCAGGAGATGCCTaGGTATGCCTGATATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTAAGDA*VCLICK Trigger: TTTACATATCAGGCATACCCAGGCATCTCCTGCAGC...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| CDS-3UTR GCA 90 bp | GGTGAAACGAGAATGTGGACTGTATACACACAAGCATGGCAAAATGTCAACTGGGCTCTGATTGCCCACTaGACTTCAGCCTGGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: GETRMWTVYTQAWQNVNWALIAH*TSAWAI Trigger: TATTGCCCAGGCTGAAGTGCAGTGGGCAATCAGAGC...CCAGTTGACATTTTGCCATGCTTGTGTGTATACAGTCCACATTCTCGTTTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
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| CDS-3UTR TCA 90 bp | AAGCATGGCAAAATGTCAACTGGTGAAACGAAATTAAGTGTATACAGGTTTCATAGTGGGAGGACTGCTTaGGCCCAGGAGGGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KHGKMSTGETKLSVYRFHSGRTA*AQEGEA Trigger: AGCCTCACCCTCCTGGGCTCAAGCAGTCCTCCCACT...ATGAAACCTGTATACACTTAATTTCGTTTCACCAGTTGACATTTTGCCATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
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| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGCTCAGCAGTGTGGCTaGCAGGGGAAAGCAGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGAQQCG*QGKAAS Trigger: GGACGCTGCTTTCCCCTGGCAGCCACACTGCTGAGC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409441.5 |
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| CDS-3UTR CCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGAGCCTCCCGAGTAGCTaGGACTACAAGCGCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGSLPSS*DYKRPP Trigger: TGGCGGGCGCTTGTAGTCCCAGCTACTCGGGAGGCT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| CDS-3UTR TCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCTCGTGTAGAGGTATATaGGAATTTAGCATCAAGACG | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTSCRGI*EFSIKT Trigger: CGTCTTGATGCTAAATTCTCATATACCTCTACACGA...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
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| CDS-3UTR TCA 90 bp | AAGCATGGCAAAATGTCAACTGGTGAAACGAAATTAAGTGTATACAGGTTTCATGGCTGCAGTGAGCTCTaGTTGCCCACTGCACTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KHGKMSTGETKLSVYRFHGCSEL*LPTALQ Trigger: CTGAAGTGCAGTGGGCAATCAGAGCTCACTGCAGCC...ATGAAACCTGTATACACTTAATTTCGTTTCACCAGTTGACATTTTGCCATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
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| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTTCCCACCATTCTCCTaGCTCAGCCTCCCGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGFPPFS*LSLPSS Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGGTGGGAA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGCAGCAATGGAACCTCTaGCTGCAGGAGATGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGQQWNL*LQEMPG Trigger: CCCAGGCATCTCCTGCAGCCAGAGGTTCCATTGCTG...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR GCA 90 bp | GGTGAAACGAGAATGTGGACTGTATACACACAAGCATGGCAAAATGTCAACTGGACTTTAAAGCATTTATaGTCAGCAGTGTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GETRMWTVYTQAWQNVNWTLKHL*SAVWLP Trigger: TGGCAGCCACACTGCTGAGCATAAATGCTTTAAAGT...CCAGTTGACATTTTGCCATGCTTGTGTGTATACAGTCCACATTCTCGTTTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
||
| CDS-3UTR GCA 90 bp | AAGCATGGCAAAATGTCAACTGGTGAAACGAAATTAAGTGTATACAGGTTTCATGCAGTGAGCTCTGATTaGCCACTGCACTTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KHGKMSTGETKLSVYRFHAVSSD*PLHFSL Trigger: CAGGCTGAAGTGCAGTGGGCAATCAGAGCTCACTGC...ATGAAACCTGTATACACTTAATTTCGTTTCACCAGTTGACATTTTGCCATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
||
| CDS-3UTR CCA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCTTTCTTCAGCTCCAATaGAAATTTCTCATAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LVETGFHLVSQDSLDLLTFLQLQ*KFLIAL Trigger: AAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAA...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGCAAGCTCCGCCTCCTaGGTTCAAGCCATTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGASSAS*VQAILL Trigger: TAGGAGAATGGCTTGAACCCAGGAGGCGGAGCTTGC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTTATGCTCAGCAGTGTaGCTGCCAGGGGAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGLCSAV*LPGESS Trigger: GCTGCTTTCCCCTGGCAGCCACACTGCTGAGCATAA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409441.5 |
||
| CDS-3UTR CCA 90 bp | AAGCATGGCAAAATGTCAACTGGTGAAACGAAATTAAGTGTATACAGGTTTCATTTATGCTCAGCAGTGTaGCTGCCAGGGGAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHGKMSTGETKLSVYRFHLCSAV*LPGESS Trigger: GCTGCTTTCCCCTGGCAGCCACACTGCTGAGCATAA...ATGAAACCTGTATACACTTAATTTCGTTTCACCAGTTGACATTTTGCCATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422797.5 |
||
| CDS-3UTR CCA 90 bp | AAGCATGGCAAAATGTCAACTGGTGAAACGAAATTAAGTGTATACAGGTTTCATTGGTCTCAGCTACTCTaGAGGCTGAAGTGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KHGKMSTGETKLSVYRFHWSQLL*RLKWED Trigger: GTCCTCCCACTTCAGCCTCCAGAGTAGCTGAGACCA...ATGAAACCTGTATACACTTAATTTCGTTTCACCAGTTGACATTTTGCCATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGACACAGGCCCAGTTCTaGAAACCTACGCACTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGTQAQF*KPTHST Trigger: GGTAGAGTGCGTAGGTTTGCAGAACTGGGCCTGTGT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393310.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTCTGGCTGCAGGAGATaGCTGGGTATGCCTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGSGCRR*LGMPDM Trigger: CATATCAGGCATACCCAGGCATCTCCTGCAGCCAGA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGAATGGAACCTCTGGCTaGAGGAGATGCCTGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGNGTSG*RRCLGM Trigger: CATACCCAGGCATCTCCTGCAGCCAGAGGTTCCATT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGGGCGTTGGCCATGTTaGTTAGCTCTTCCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGGRWPC*LALPLV Trigger: TACCAGAGGAAGAGCTAAGCAACATGGCCAACGCCC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000409441.5 |
||
| CDS-3UTR GCA 90 bp | AAGCATGGCAAAATGTCAACTGGTGAAACGAAATTAAGTGTATACAGGTTTCATGGGCGTTGGCCATGTTaGTTAGCTCTTCCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KHGKMSTGETKLSVYRFHGRWPC*LALPLV Trigger: TACCAGAGGAAGAGCTAAGCAACATGGCCAACGCCC...ATGAAACCTGTATACACTTAATTTCGTTTCACCAGTTGACATTTTGCCATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGAGCAAAGACAGCAATaGAACCTCTGGCTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGEQRQQ*NLWLQE Trigger: CTCCTGCAGCCAGAGGTTCCATTGCTGTCTTTGCTC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGCTCCATGCTCATAGATaGCACCCTCTCACTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGLHAHR*HPLTVS Trigger: GGACACAGTGAGAGGGTGCCATCTATGAGCATGGAG...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410093.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGGGCGTTGGCCATGTTaGCTGTGTTTGGCTGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGGRWPC*LCLADL Trigger: TAAATCAGCCAAACACAGGCAACATGGCCAACGCCC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000393310.5 |
||
| CDS-3UTR TCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTGGTCACATATTAGCTaGCAAAGGCACACTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGWSHIS*QRHTEG Trigger: CCCTTCAGTGTGCCTTTGTCAGCTAATATGTGACCA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR TCA 90 bp | AAGCATGGCAAAATGTCAACTGGTGAAACGAAATTAAGTGTATACAGGTTTCATTTTGGAAGGCTGAGATaGGTAGATTGCTTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHGKMSTGETKLSVYRFHFGRLR*VDCLSP Trigger: TGGGCTCAAGCAATCTACTCATCTCAGCCTTCCAAA...ATGAAACCTGTATACACTTAATTTCGTTTCACCAGTTGACATTTTGCCATGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422797.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGTCGAGTTCAGGCCATaGATCTTCAAAGTGACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGVEFRP*IFKVTK Trigger: CTTCGTCACTTTGAAGATGCATGGCCTGAACTCGAC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGAGGTGTGAGGCACCGTaGCTGTCCACTAATTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGRCEAP*LSTNSY Trigger: ATATGAATTAGTGGACAGGCACGGTGCCTCACACCT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGTTGTTATCAGGGCTTaGGAGGCCAGTTTCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGVVIRA*EASFTS Trigger: TGATGTGAAACTGGCCTCCCAAGCCCTGATAACAAC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332345.10 |
||
| CDS-3UTR CCA 90 bp | GGTGAAACGAGAATGTGGACTGTATACACACAAGCATGGCAAAATGTCAACTGGTTACAAAAAGTATCGTaGTTCCATAGGAAAATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GETRMWTVYTQAWQNVNWLQKVS*FHRKML Trigger: GAGCATTTTCCTATGGAACCACGATACTTTTTGTAA...CCAGTTGACATTTTGCCATGCTTGTGTGTATACAGTCCACATTCTCGTTTCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000422797.5 |
||
| CDS-3UTR CCA 90 bp | GGTGAAACGAGAATGTGGACTGTATACACACAAGCATGGCAAAATGTCAACTGGGATGACAAATATTTCTaGGGCTACTGGGAATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GETRMWTVYTQAWQNVNWDDKYF*GYWEYF Trigger: AAAATATTCCCAGTAGCCCCAGAAATATTTGTCATC...CCAGTTGACATTTTGCCATGCTTGTGTGTATACAGTCCACATTCTCGTTTCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
||
| CDS-3UTR TCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTTGCCTGTGTTTGGCTaGTTTAGGCAATCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGLPVFG*FRQSCP Trigger: TGGACATGATTGCCTAAATCAGCCAAACACAGGCAA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393310.5 |
||
| CDS-3UTR TCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGCTGACAAAGGCACACTaGAGGGACTTTGATTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGLTKAH*RDFDSY Trigger: GTAAGAATCAAAGTCCCTTCAGTGTGCCTTTGTCAG...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR TCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGCATGTCATGTATCTTaGTTCGATGTGTCCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGACHVS*FDVSLI Trigger: GATGAGGGACACATCGAATCAAGATACATGACATGC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000410093.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTTGGCACAAACAAAATaGTCCACATGCCACTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGLAQTK*STCHCL Trigger: CAAGCAGTGGCATGTGGAGCATTTTGTTTGTGCCAA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000332345.10 ENST00000338045.7 ENST00000393310.5 ENST00000409441.5 ENST00000410093.5 ENST00000544547.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGGGCGTTGGCCATGTTaGATGTCATGTATCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGGRWPC*MSCILI Trigger: AATCAAGATACATGACATGCAACATGGCCAACGCCC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000410093.5 |
||
| CDS-3UTR TCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGATGCCTGGGTATGCCTaGTATGTAAACAAACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGMPGYA*YVNKHK Trigger: CTTGTGTTTGTTTACATATCAGGCATACCCAGGCAT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGATCAAGACGCTATACTaGAAACCCTGTTCTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGIKTLY*KPCSVL Trigger: CAACACAGAACAGGGTTTGCAGTATAGCGTCTTGAT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGACTTTAAAGCATTTATaGTCAGCAGTGTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGTLKHL*SAVWLP Trigger: TGGCAGCCACACTGCTGAGCATAAATGCTTTAAAGT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409441.5 |
||
| CDS-3UTR GCA 90 bp | AAGCATGGCAAAATGTCAACTGGTGAAACGAAATTAAGTGTATACAGGTTTCATGGTTCCATAGGAAAATaGTCTTATTCTCAGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: KHGKMSTGETKLSVYRFHGSIGK*SYSQET Trigger: CGTCTCCTGAGAATAAGAGCATTTTCCTATGGAACC...ATGAAACCTGTATACACTTAATTTCGTTTCACCAGTTGACATTTTGCCATGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422797.5 |
||
| CDS-3UTR TCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTCGTGTAGAGGTATATaGGAATTTAGCATCAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGSCRGI*EFSIKT Trigger: CGTCTTGATGCTAAATTCTCATATACCTCTACACGA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGCCAGTTTCACATCACTaGGAATTATCTTTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGPVSHH*ELSLKA Trigger: GGCTTTCAAAGATAATTCGCAGTGATGTGAAACTGG...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332345.10 |
||
| CDS-3UTR GCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGAAACTTCCACTCCTTTaGCTTAGTCACTTTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGKLPLL*LSHFTH Trigger: GTGTGTAAAGTGACTAAGGCAAAGGAGTGGAAGTTT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393310.5 |
||
| CDS-3UTR TCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGGTTATAAAGGCAATATaGCCGACATACACATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGVIKAI*PTYTFS Trigger: ACTGAATGTGTATGTCGGTCATATTGCCTTTATAAC...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR TCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGAAGGCAAGGCAAGTTTaGGTATGTATAAAGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGKARQV*VCIKHR Trigger: TCTATGCTTTATACATACTCAAACTTGCCTTGCCTT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTTTCTTCAGCTCCAATaGAAATTTCTCATAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IHIGPLLSTALRYSFKYGFLQLQ*KFLIAL Trigger: AAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000332345.10 ENST00000338045.7 ENST00000393310.5 ENST00000409441.5 ENST00000410093.5 ENST00000544547.5 |
||
| CDS-3UTR CAA 90 bp | TTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATAGTCTGGATCTCCTGACCAGGGCGTTGGCCATGTaGCTGTGGGTCATCCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVETGFHLVSQDSLDLLTRALAM*LWVIPA Trigger: GGCCGGGATGACCCACAGCAACATGGCCAACGCCCT...GGTCAGGAGATCCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544547.5 |
||
| CDS-3UTR CAA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGAGGGCGTTGGCCATGTaGTTATCAGGGCTTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IHIGPLLSTALRYSFKYGRALAM*LSGLGR Trigger: CCTCCCAAGCCCTGATAACAACATGGCCAACGCCCT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332345.10 |
||
| CDS-3UTR CAA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTGCAGTGGCGTGATCTaGGCTCACTGCAAGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IHIGPLLSTALRYSFKYGCSGVI*AHCKLC Trigger: GCAGAGCTTGCAGTGAGCCAAGATCACGCCACTGCA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR CAA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGAGACGGGGTTTCACCTaGTTAGCCAGGATAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IHIGPLLSTALRYSFKYGRRGFT*LARIVW Trigger: CCAGACTATCCTGGCTAACAAGGTGAAACCCCGTCT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393310.5 ENST00000544547.5 |
||
| CDS-3UTR CAA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGTGTTGTTATCAGGGCTaGGGAGGCCAGTTTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: IHIGPLLSTALRYSFKYGCCYQG*GGQFHI Trigger: GATGTGAAACTGGCCTCCCAAGCCCTGATAACAACA...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332345.10 |
||
| CDS-3UTR CAA 90 bp | AAGCATGGCAAAATGTCAACTGGTGAAACGAAATTAAGTGTATACAGGTTTCATGCTGAGATGAGTAGATaGCTTGAGCCCAGGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KHGKMSTGETKLSVYRFHAEMSR*LEPRSL Trigger: CAAACTCCTGGGCTCAAGCAATCTACTCATCTCAGC...ATGAAACCTGTATACACTTAATTTCGTTTCACCAGTTGACATTTTGCCATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422797.5 |
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| CDS-3UTR CAA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGAGGGCGTTGGCCATGTaGCATGTCATGTATCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: IHIGPLLSTALRYSFKYGRALAM*HVMYLD Trigger: ATCAAGATACATGACATGCAACATGGCCAACGCCCT...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410093.5 |
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| CDS-3UTR CAA 90 bp | ATTCATATAGGTCCTCTTCTCTCAACTGCTTTGAGATATAGCTTTAAATATGGGCCATGTTGCCTGTGTTaGGCTGATTTAGGCAATCAT | + |
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Preference number: 5 (lower is better) Translates to: IHIGPLLSTALRYSFKYGPCCLC*ADLGNH Trigger: ATGATTGCCTAAATCAGCCAAACACAGGCAACATGG...CCCATATTTAAAGCTATATCTCAAAGCAGTTGAGAGAAGAGGACCTATATGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393310.5 |
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| CDS TCA 72 bp | GGCCAGGGCGTTGGCCATGTTGCATGTCATGTATCTTaGTTCGATGTGTCCCTCATCAGCTGGCTGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GQGVGHVACHVS*FDVSLISWLSK Trigger: CTTGGACAGCCAGCTGATGAGGGACACATCGAATCAAGATACATGACATGCAACATGGCCAACGCCCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410093.5 |
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| CDS CAA 72 bp | TGGCCAGGGCGTTGGCCATGTTGCATGTCATGTATCTaGATTCGATGTGTCCCTCATCAGCTGGCTGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: WPGRWPCCMSCI*IRCVPHQLAVQ Trigger: TTGGACAGCCAGCTGATGAGGGACACATCGAATCAAGATACATGACATGCAACATGGCCAACGCCCTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410093.5 |
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