Pregenerated sensors for LIMK2 (Homo sapiens)
Ensembl gene IDs: ENSG00000182541Ensembl transcript IDs: ENST00000331728.9, ENST00000333611.8, ENST00000340552.4, ENST00000406516.5, ENST00000425203.1, ENST00000462625.1, ENST00000465937.1, ENST00000482270.5
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAAGATGGAGGTTTTCCAGTACCTGCACATGTGGCTCAGGAGGATaGTGCCCAGGAGCTAATGAGTTGGGAGAGCAAACATGGGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: PRWRFSSTCTCGSGG*CPGANELGEQTWEV Trigger: TACCTCCCATGTTTGCTCTCCCAACTCATTAGCTCCTGGGCAGCATCCTCCTGAGCCACATGTGCAGGTACTGGAAAACCTCCATCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| 3UTR GCA 90 bp | TTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTaGGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACC | + |
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Preference number: 1 (lower is better) Translates to: FTISPQAFTLVLLKD*GPWPIKEQGIDSPT Trigger: GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| 3UTR CCA 90 bp | TCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTTaGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTT | + |
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Preference number: 1 (lower is better) Translates to: SPQAFTLVLLKDCGP*PIKEQGIDSPTRKF Trigger: AAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAAGCCCGGACGGCCCTaGTCACAGCAGGAATGGGGC | + |
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Preference number: 2 (lower is better) Translates to: PGRTGSGVERGSITDFFTKPGRP*SQQEWG Trigger: GCCCCATTCCTGCTGTGAGCAGGGCCGTCCGGGCTT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCTCCCACAATCCACTaGCAGGGAGTTCCTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PGRTGSGVERGSITDFFTPPTIH*QGVPGW Trigger: CCACCCAGGAACTCCCTGGCAGTGGATTGTGGGAGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGATACATTTCCCTGGTaGTGCGCCCACTTGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PGRTGSGVERGSITDFFTDTFPW*CAHLPP Trigger: AGGAGGCAAGTGGGCGCAGCACCAGGGAAATGTATC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGGAGATACATTTCCCTaGTGCTGCGCCCACTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PGRTGSGVERGSITDFFTGDTFP*CCAHLP Trigger: AGGCAAGTGGGCGCAGCACCAGGGAAATGTATCTCC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTGCCAGGGAGTTCCTaGGTGGATTCGAGTAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGRTGSGVERGSITDFFTLPGSS*VDSSNR Trigger: TCTGTTACTCGAATCCACCCAGGAACTCCCTGGCAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| 3UTR CAA 90 bp | TTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTaGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATT | + |
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Preference number: 2 (lower is better) Translates to: FSSSFYTGVTEGLRS*AYKGTRYRFSHQKI Trigger: AATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGTTACTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATATTTCAACTCTAATGTaGACCGCTGGAAATCATTTT | + |
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Preference number: 2 (lower is better) Translates to: LVLLKDCGPWPIKEQGIDISTLM*TAGNHF Trigger: AAAATGATTTCCAGCGGTCCACATTAGAGTTGAAAT...ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCATTTCAACTCTAATGTaGACCGCTGGAAATCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: CSFTISPQAFTLVLLKDCISTLM*TAGNHF Trigger: AAAATGATTTCCAGCGGTCCACATTAGAGTTGAAAT...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| 3UTR GCA 72 bp | AACATTCCGCCAATCCACAGGAAGCCCGGACGGCCCTaGTCACAGCAGGAATGGGGCACAGAGGGGCAATGC | + |
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Preference number: 3 (lower is better) Translates to: NIPPIHRKPGRP*SQQEWGTEGQC Trigger: GCATTGCCCCTCTGTGCCCCATTCCTGCTGTGAGCAGGGCCGTCCGGGCTTCCTGTGGATTGGCGGAATGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTTTCGTCCACACACTaGAAGTCCTCCTGCACCCAG | + |
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Preference number: 3 (lower is better) Translates to: PGRTGSGVERGSITDFFTLSSTH*KSSCTQ Trigger: CTGGGTGCAGGAGGACTTCAAGTGTGTGGACGAAAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| 3UTR GCA 72 bp | TCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTaGGGTCCTTGGCCTATAAAGGAACAAGGTATAGAT | + |
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Preference number: 3 (lower is better) Translates to: SPQAFTLVLLKD*GPWPIKEQGID Trigger: ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCGGGAGCGCGGAAATaGGGAGGAGGAGGCGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTPGARK*GGGGGG Trigger: TCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000331728.9 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCGGCATTCTGCATGTaGGGAGCGAGCCGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTPAFCM*GASRAS Trigger: GGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR TCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCCCGGCATTCTGCATGTaGGGAGCGAGCCGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTPAFCM*GASRAS Trigger: GGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGG...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGCAGCTGCGGGAGCCTaGGGACTCCAGGCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTAAAGA*GLQATW Trigger: CCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333611.8 |
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| CDS-3UTR TCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCGCAGCTGCGGGAGCCTaGGGACTCCAGGCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTAAAGA*GLQATW Trigger: CCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGC...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340552.4 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATGTAGATGGCCACCATaGCAGGCCCGGGGCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTCRWPP*QARGSR Trigger: CCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000333611.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACGGAGAAGCCCCGCCTaGCTTCAGTGGTGGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTRRSPA*LQWWPA Trigger: TGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCGCCAGCGCGGACATaGTCCCGGGAGCGCGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTPPART*SRERGN Trigger: ATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331728.9 |
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| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATGGCTGCAGGCAGGCTaGCCTGAGCTCACCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTWLQAG*PELTSP Trigger: GGGAGAGGTGAGCTCAGGGCAGCCTGCCTGCAGCCA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333611.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATCTCAGGCTCCAGTCTaGAGCAGATGGCGGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTSQAPV*SRWRPA Trigger: CGCTGGCCGCCATCTGCTGCAGACTGGAGCCTGAGA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCTCTCAGGCTCCAGTCTaGAGCAGATGGCGGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTSQAPV*SRWRPA Trigger: CGCTGGCCGCCATCTGCTGCAGACTGGAGCCTGAGA...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGAACTGTGCTGCTGCTaGGAGTCCAGGGCTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTELCCC*ESRAQP Trigger: GGGCTGAGCCCTGGACTCCCAGCAGCAGCACAGTTC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331728.9 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATCCCACAGGGGCTCATaGCTGGGATGGCTCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTSHRGS*LGWLLP Trigger: AGGGAGGAGCCATCCCAGCCATGAGCCCCTGTGGGA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000333611.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGGACTCCAGGCCACTTaGCCCCCAGCAGATTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTGLQAT*PPADSH Trigger: GTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000333611.8 |
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| CDS-3UTR CCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCGGACTCCAGGCCACTTaGCCCCCAGCAGATTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTGLQAT*PPADSH Trigger: GTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCC...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340552.4 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTGCAAATCCGTCTGTaGCTGCCTCAGGCCGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLQIRL*LPQAGC Trigger: ACAGCCGGCCTGAGGCAGTCACAGACGGATTTGCAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333611.8 |
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| CDS-3UTR CCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCCCGGGAGCGCGGAAATaGGGAGGAGGAGGCGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: CSFTISPQAFTLVLLKDCPGARK*GGGGGG Trigger: TCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGG...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406516.5 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACAGTGGTGGCGTAGTTaGAGCAGGCACTCTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTQWWRS*SRHSPR Trigger: CCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCCAGTGGTGGCGTAGTTaGAGCAGGCACTCTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTQWWRS*SRHSPR Trigger: CCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTG...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAATGTGGTCCCTGGGCTaGCTAGAGCCAGTGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTMWSLG*LEPVSR Trigger: CCTGCTCACTGGCTCTAGCCAGCCCAGGGACCACAT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTCAGGCGGCCCCTCTaGACTCCGAGAAAACGACCT | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLRRPL*TPRKRP Trigger: AGGTCGTTTTCTCGGAGTCCAGAGGGGCCGCCTGAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000333611.8 |
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| CDS-3UTR TCA 90 bp | CGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCACCGGCATTCTGCATGTaGGGAGCGAGCCGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSLAYKGTRYRFSHQKISPAFCM*GASRAS Trigger: GGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGG...TGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAGACCAAGAGATTGCTaGGACTCCCACTCCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTRPRDC*DSHSPP Trigger: GGGAGGGGAGTGGGAGTCTCAGCAATCTCTTGGTCT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGCAAACCTGACCTTCTaGTGCCAGGGGAACGGATCC | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTANLTF*CQGNGS Trigger: GGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR GCA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGGCAAACCTGACCTTCTaGTGCCAGGGGAACGGATCC | + |
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Preference number: 4 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQANLTF*CQGNGS Trigger: GGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGC...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCGTGTAGCGCTTCTTaGGGTCGTTCTTGCGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTPCSAS*GRSCAR Trigger: CCTTGCGCAAGAACGACCGCAAGAAGCGCTACACGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CCA 90 bp | CGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCACCGCCAGCGCGGACATaGTCCCGGGAGCGCGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: RSLAYKGTRYRFSHQKISPPART*SRERGN Trigger: ATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGG...TGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406516.5 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATGGCTTGGAGCAATGTaGTCCCCACAGCCTGGACAC | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTWLGAM*SPQPGH Trigger: GTGTCCAGGCTGTGGGGACCACATTGCTCCAAGCCA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000331728.9 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGGTCCCCAGGGTGGATaGCGTTTCGATTGTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTGPQGG*RFDCWD Trigger: GTCCCAACAATCGAAACGCCATCCACCCTGGGGACC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAGCTGGTCCAGGCGTTaGGAGACGGGGTCATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTSWSRR*ETGSCS Trigger: TGAACATGACCCCGTCTCCCAACGCCTGGACCAGCT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATGGGGCCAGGGGACTTaGAGATACTGTTACTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTWGQGT*RYCYCA Trigger: GGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAGGTGCGTTTCTTGGTaGTGGCCTTCTCCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTRCVSW*WPSPWG Trigger: CCCCCATGGAGAAGGCCACCACCAAGAAACGCACCT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGGCTCATGGCTGGGATaGCTCCTCCCTAGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTGSWLG*LLPSSQ Trigger: CTGAGAACTAGGGAGGAGCCATCCCAGCCATGAGCC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAACAGGGGCTCATGGCTaGGATGGCTCCTCCCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTTGAHG*DGSSLV Trigger: AACTAGGGAGGAGCCATCCCAGCCATGAGCCCCTGT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGGAATCCTGGCATTCTaGACACCGGAAGCAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTGILAF*TPEARA Trigger: GGCTCTTGCTTCCGGTGTTCAGAATGCCAGGATTCC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAGCAGGGAGCACCCATaGCAGAACTCCCCAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTSREHP*QNSPNF Trigger: GAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGCAGGGAGCACCCATaGCAGAACTCCCCAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTSREHP*QNSPNF Trigger: GAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCT...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAACAGGTCTCTGGAGGTaGAGTAAGCCGGGACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTTGLWR*SKPGLT Trigger: TGTCAGTCCCGGCTTACTTCACCTCCAGAGACCTGT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACGGAAGCAAGAGCCGTaGCAGGTTTCGTTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTRKQEP*QVSLTV Trigger: GACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATCGAGAATGCTGGTCTaGTCTCAGGCTCCAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTSRMLV*SQAPVC Trigger: GCAGACTGGAGCCTGAGAGCAGACCAGCATTCTCGA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGGCTCAGGAGGATGCTaGCCAGGAGCTAATGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTGSGGC*PGANEL Trigger: CAACTCATTAGCTCCTGGGCAGCATCCTCCTGAGCC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACACCACTCCTACACTTaGTGGGGACAGCCAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTHHSYT*WGQPGN Trigger: GTTTCCTGGCTGTCCCCAGCAAGTGTAGGAGTGGTG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATCCCACAGTAGAGGGTaGCATGCTGCACCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTSHSRG*HAAPVH Trigger: ATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGTCCCACAGTAGAGGGTaGCATGCTGCACCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQSHSRG*HAAPVH Trigger: ATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGA...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAATGCGGTCCCCAGGGTaGATGGCGTTTCGATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTMRSPG*MAFRLL Trigger: CAACAATCGAAACGCCATCCACCCTGGGGACCGCAT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGATGCGGTCCCCAGGGTaGATGGCGTTTCGATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQMRSPG*MAFRLL Trigger: CAACAATCGAAACGCCATCCACCCTGGGGACCGCAT...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATGGTGGCCTTCTCCATaGGGGCCCTTTTCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTWWPSP*GPFSSL Trigger: AAGAGAGGAAAAGGGCCCCCATGGAGAAGGCCACCA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGTGGTGGCCTTCTCCATaGGGGCCCTTTTCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQWWPSP*GPFSSL Trigger: AAGAGAGGAAAAGGGCCCCCATGGAGAAGGCCACCA...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGCAAGGTGCGTTTCTTaGTGGTGGCCTTCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTARCVS*WWPSPW Trigger: CCATGGAGAAGGCCACCACCAAGAAACGCACCTTGC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGGCAAGGTGCGTTTCTTaGTGGTGGCCTTCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQARCVS*WWPSPW Trigger: CCATGGAGAAGGCCACCACCAAGAAACGCACCTTGC...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCGGAAGATCTGCTGTaGATAGCTGCTGGAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTPEDLL*IAAGTT Trigger: CGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGCCGGAAGATCTGCTGTaGATAGCTGCTGGAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQPEDLL*IAAGTT Trigger: CGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGG...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATCCTCTCTTCCACTATaGGCCGTGACAGCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTSSLPL*AVTAQS Trigger: ACTTTGGGCTGTCACGGCTCATAGTGGAAGAGAGGA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGAGCCCACCCGAGTATaGGTAACAGAAGCCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTEPTRV*VTEAKI Trigger: GATCTTGGCTTCTGTTACTCATACTCGGGTGGGCTC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAACCTGACCTTCTGCTaGCAGGGGAACGGATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTNLTFC*QGNGSI Trigger: TATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAACCTGACCTTCTGCTaGCAGGGGAACGGATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQNLTFC*QGNGSI Trigger: TATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTT...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATTGATGAGGCAGTTGTaGGAGTTCAGATCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLMRQL*EFRSRW Trigger: CCACCGGGATCTGAACTCGCACAACTGCCTCATCAA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCTTGATGAGGCAGTTGTaGGAGTTCAGATCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTLMRQL*EFRSRW Trigger: CCACCGGGATCTGAACTCGCACAACTGCCTCATCAA...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATCTTGCGGTCGTTCTTaGGCAAGGTGCGTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTSCGRS*ARCVSW Trigger: CCAAGAAACGCACCTTGCGCAAGAACGACCGCAAGA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCTCTTGCGGTCGTTCTTaGGCAAGGTGCGTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTSCGRS*ARCVSW Trigger: CCAAGAAACGCACCTTGCGCAAGAACGACCGCAAGA...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTACTCCCTCAACCTTaGTCCAGGAAGGACAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLLPQP*SRKDRI Trigger: GATCCTGTCCTTCCTGGAGCAAGGTTGAGGGAGTAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAGGGTGAGCAGTGGTTaGCATGAAGCCAAGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTRVSSG*HEAKTK Trigger: CTTGGTCTTGGCTTCATGGCAACCACTGCTCACCCT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAAATCCGTCTGTGACTaGCTCAGGCCGGCTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTKSVCD*LRPAVD Trigger: ATCTACAGCCGGCCTGAGGCAGTCACAGACGGATTT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTGTTACTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATAGGTGCGTTTCTTGGTaGTGGCCTTCTCCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLLKDCGPWPIKEQGIDRCVSW*WPSPWG Trigger: CCCCCATGGAGAAGGCCACCACCAAGAAACGCACCT...ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTCTGGGAGCCAAGATaGAGGTTTTCCAGTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLWEPR*RFSSTC Trigger: GCAGGTACTGGAAAACCTCCATCTTGGCTCCCAGAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACGTGCCAGGTTTCGTTaGCAGTCCTGTACCATATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTRARFR*QSCTIS Trigger: AGATATGGTACAGGACTGTCAACGAAACCTGGCACG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACATAGTACCAGTTGGTaGGGGAATCCTGGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTHSTSW*GNPGIL Trigger: CAGAATGCCAGGATTCCCTCACCAACTGGTACTATG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGTTACTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATAGCAGGGAGCACCCATaGCAGAACTCCCCAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLKDCGPWPIKEQGIDSREHP*QNSPNF Trigger: GAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCT...ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAATGTTTTAGGCATCTaGCTAAGGAGCCCACCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTNVLGI*LRSPPE Trigger: CTCGGGTGGGCTCCTTAGTCAGATGCCTAAAACATT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGAGCAGTGGTTGCCATaGAGCCAAGACCAAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTEQWLP*SQDQEI Trigger: AATCTCTTGGTCTTGGCTTCATGGCAACCACTGCTC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAACTCTGACCAGAGATaGCATCTGGTCCCACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTNSDQR*HLVPQL Trigger: GAGTTGTGGGACCAGATGTCATCTCTGGTCAGAGTT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTGTAGATGGCCACCATaGCAGGCCCGGGGCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVCRWPP*QARGSR Trigger: CCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACA...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340552.4 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGAAGTAAGCCGGGACTaGCAAGTAACTCCCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTEVSRD*QVTPHL Trigger: AAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGCGGAGAAGCCCCGCCTaGCTTCAGTGGTGGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVRRSPA*LQWWPA Trigger: TGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCG...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGGAACGGATCCATACTaGGCAGAAAGTCCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTGTDPY*AESPSV Trigger: CACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTCCAATTTCGAGAATaGTGGTCTGCTCTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLQFRE*WSALRL Trigger: GAGCCTGAGAGCAGACCAGCATTCTCGAAATTGGAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAGGTTTTCCAGTACCTaGACATGTGGCTCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTRFSST*TCGSGG Trigger: TCCTCCTGAGCCACATGTGCAGGTACTGGAAAACCT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAATAGACAGGCTCAGCTaGAAATCCGTCTGTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTIDRLS*KSVCDC Trigger: GCAGTCACAGACGGATTTGCAGCTGAGCCTGTCTAT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGTACCATATCTGGCTTaGAGCAATGTGGTCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTVPYLA*SNVVPT Trigger: TGTGGGGACCACATTGCTCCAAGCCAGATATGGTAC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGTCCTGTACCATATCTaGCTTGGAGCAATGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTVLYHI*LGAMWS Trigger: GGACCACATTGCTCCAAGCCAGATATGGTACAGGAC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATTGGTGAGGGAATCCTaGCATTCTGAACACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLVRES*HSEHRK Trigger: CTTCCGGTGTTCAGAATGCCAGGATTCCCTCACCAA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCCAGTGGTGGCGTAGTTaGAGCAGGCACTCTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CSFTISPQAFTLVLLKDCQWWRS*SRHSPR Trigger: CCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTG...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | TTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTGGTCCCCAGGGTGGATaGCGTTTCGATTGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FTISPQAFTLVLLKDCGPGPQGG*RFDCWD Trigger: GTCCCAACAATCGAAACGCCATCCACCCTGGGGACC...AGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | TTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTAGCTGGTCCAGGCGTTaGGAGACGGGGTCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTISPQAFTLVLLKDCGPSWSRR*ETGSCS Trigger: TGAACATGACCCCGTCTCCCAACGCCTGGACCAGCT...AGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGAGTTCAGATCCCGGTaGATGATGCACATAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTEFRSR*MMHIEC Trigger: GCACTCTATGTGCATCATCCACCGGGATCTGAACTC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACAATTTCGAGAATGCTaGTCTGCTCTCAGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTQFREC*SALRLQ Trigger: CTGGAGCCTGAGAGCAGACCAGCATTCTCGAAATTG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAGGAAGGACAGGATCTaGAGTAGAAAGGGGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTRKDRI*SRKGEH Trigger: ATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACAGGAGCTAATGAGTTaGGAGAGCAAACATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTQELMS*ESKHGR Trigger: CCTCCCATGTTTGCTCTCCCAACTCATTAGCTCCTG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGAGTTCCTAGAGCTCTaGGAGCCAAGATGGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTEFLEL*EPRWRF Trigger: AAACCTCCATCTTGGCTCCCAGAGCTCTAGGAACTC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAAAACGACCTCTCTGTaGAGGCTACACACACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTKTTSL*RLHTHW Trigger: CCAGTGTGTGTGTAGCCTCCACAGAGAGGTCGTTTT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGCGGAGAAGCCCCGCCTaGCTTCAGTGGTGGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LENKYCVASQFLLKLLHWRRSPA*LQWWPA Trigger: TGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCG...CCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | CGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAGCAAACCTGACCTTCTaGTGCCAGGGGAACGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLAYKGTRYRFSHQKISANLTF*CQGNGS Trigger: GGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGC...TGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | CTGGTGTTACTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTTGCGGTCGTTCTTaGGCAAGGTGCGTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLLKDCGPWPIKEQGIDSCGRS*ARCVSW Trigger: CCAAGAAACGCACCTTGCGCAAGAACGACCGCAAGA...ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTGGCTGCAGGCAGGCTaGCCTGAGCTCACCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVWLQAG*PELTSP Trigger: GGGAGAGGTGAGCTCAGGGCAGCCTGCCTGCAGCCA...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340552.4 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCTGAACAGACTCTGTaGAGAGTCTCTCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTPEQTL*RVSQTW Trigger: CCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCCCAGGGTGGATaGCGTTTCGATTGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSFTISPQAFTLVLLKDCGPQGG*RFDCWD Trigger: GTCCCAACAATCGAAACGCCATCCACCCTGGGGACC...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCAGCTGGTCCAGGCGTTaGGAGACGGGGTCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSFTISPQAFTLVLLKDCSWSRR*ETGSCS Trigger: TGAACATGACCCCGTCTCCCAACGCCTGGACCAGCT...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCTGGGGCCAGGGGACTTaGAGATACTGTTACTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSFTISPQAFTLVLLKDCWGQGT*RYCYCA Trigger: GGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCA...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGCTGTGAATAGCTGCTaGAACAACGAAGGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTAVNSC*NNEGIL Trigger: CAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGGCTGTGAATAGCTGCTaGAACAACGAAGGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQAVNSC*NNEGIL Trigger: CAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGC...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAAGGTGCGTTTCTTGGTaGTGGCCTTCTCCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSLAYKGTRYRFSHQKISRCVSW*WPSPWG Trigger: CCCCCATGGAGAAGGCCACCACCAAGAAACGCACCT...TGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATTGGGAGAGCAAACATaGGAGGTAGAAGTCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLGEQT*EVEVRW Trigger: CCATCTGACTTCTACCTCCCATGTTTGCTCTCCCAA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATTGGTGAGGGAATCCTaGCATTCTGAACACCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLVRES*HSEHRN Trigger: GTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333611.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCTTGGTGAGGGAATCCTaGCATTCTGAACACCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTLVRES*HSEHRN Trigger: GTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAA...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340552.4 |
||
| CDS-3UTR TCA 90 bp | TTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTCCGGAAGATCTGCTGTaGATAGCTGCTGGAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: FTISPQAFTLVLLKDCGPPEDLL*IAAGTT Trigger: CGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGG...AGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | TTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTTCCTCTCTTCCACTATaGGCCGTGACAGCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTISPQAFTLVLLKDCGPSSLPL*AVTAQS Trigger: ACTTTGGGCTGTCACGGCTCATAGTGGAAGAGAGGA...AGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | TTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTTTACACTGGTGTTACTaGAGGACTGCGGTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTISPQAFTLVLLKDCGPLHWCY*RTAVLG Trigger: GCCAAGGACCGCAGTCCTTCAGTAACACCAGTGTAA...AGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATCTGCTGTGAATAGCTaGTGGAACAACGAAGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTSAVNS*WNNEGI Trigger: AATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCCCGTGTAGCGCTTCTTaGGGTCGTTCTTGCGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWPIKEQGIDSPTRKFQLPCSAS*GRSCAR Trigger: CCTTGCGCAAGAACGACCGCAAGAAGCGCTACACGG...GAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTCTCAGGCTCCAGTCTaGAGCAGATGGCGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVSQAPV*SRWRPA Trigger: CGCTGGCCGCCATCTGCTGCAGACTGGAGCCTGAGA...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CTGGTGTTACTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATGAGTTCAGATCCCGGTaGATGATGCACATAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLKDCGPWPIKEQGIDEFRSR*MMHIEC Trigger: GCACTCTATGTGCATCATCCACCGGGATCTGAACTC...ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCTGGTGGCCTTCTCCATaGGGGCCCTTTTCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSFTISPQAFTLVLLKDCWWPSP*GPFSSL Trigger: AAGAGAGGAAAAGGGCCCCCATGGAGAAGGCCACCA...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCTCCTCTCTTCCACTATaGGCCGTGACAGCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSFTISPQAFTLVLLKDCSSLPL*AVTAQS Trigger: ACTTTGGGCTGTCACGGCTCATAGTGGAAGAGAGGA...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTTTTTCACACCCTTTaGGCCATCAGTCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLFHTL*AISLSF Trigger: GAAAGAAAGACTGATGGCTCAAAGGGTGTGAAAAAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTCTTCCTTTGCTTGTaGCTGTTTGTTTCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTLFLCL*LFVSDR Trigger: TCTGTCTGAAACAAACAGTCACAAGCAAAGGAAGAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCTACTGCAAATCCGTCTGTaGCTGCCTCAGGCCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAYKGTRYRFSHQKISTLLQIRL*LPQAGC Trigger: ACAGCCGGCCTGAGGCAGTCACAGACGGATTTGCAG...TAGAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340552.4 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCACAGGTCTCTGGAGGTaGAGTAAGCCGGGACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PWPIKEQGIDSPTRKFQLTGLWR*SKPGLT Trigger: TGTCAGTCCCGGCTTACTTCACCTCCAGAGACCTGT...GAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340552.4 |
||
| CDS-3UTR GCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCTTGATGAGGCAGTTGTaGGAGTTCAGATCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSFTISPQAFTLVLLKDCLMRQL*EFRSRW Trigger: CCACCGGGATCTGAACTCGCACAACTGCCTCATCAA...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATTTATCAATTCCCCCTaGTCCAATACAACCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGRTGSGVERGSITDFFTFINSP*SNTTTT Trigger: TGTGGTGGTTGTATTGGAGCAGGGGGAATTGATAAA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCTTACACTGGTGTTACTaGAGGACTGCGGTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PWPIKEQGIDSPTRKFQLLHWCY*RTAVLG Trigger: GCCAAGGACCGCAGTCCTTCAGTAACACCAGTGTAA...GAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | CGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAGGAACGGATCCATACTaGGCAGAAAGTCCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSLAYKGTRYRFSHQKISGTDPY*AESPSV Trigger: CACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCC...TGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCTACCGTGTAGCGCTTCTTaGGGTCGTTCTTGCGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAYKGTRYRFSHQKISTLPCSAS*GRSCAR Trigger: CCTTGCGCAAGAACGACCGCAAGAAGCGCTACACGG...TAGAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCATAGACAGGCTCAGCTaGAAATCCGTCTGTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSFTISPQAFTLVLLKDCIDRLS*KSVCDC Trigger: GCAGTCACAGACGGATTTGCAGCTGAGCCTGTCTAT...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340552.4 |
||
| CDS-3UTR CCA 90 bp | TTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTCCTGAACAGACTCTGTaGAGAGTCTCTCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: FTISPQAFTLVLLKDCGPPEQTL*RVSQTW Trigger: CCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGG...AGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | TTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTAAGGACTGCGGTCCTTaGCCTATAAAGGAACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTISPQAFTLVLLKDCGPKDCGP*PIKEQG Trigger: ACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTT...AGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| 3UTR CAA 72 bp | AGCTTTTACACTGGTGTTACTGAAGGACTGCGGTCCTaGGCCTATAAAGGAACAAGGTATAGATTCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFYTGVTEGLRS*AYKGTRYRFSH Trigger: GTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTCCCACAGTAGAGGGTaGCATGCTGCACCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVSHSRG*HAAPVH Trigger: ATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGA...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | CGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCACCTGAACAGACTCTGTaGAGAGTCTCTCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: RSLAYKGTRYRFSHQKISPEQTL*RVSQTW Trigger: CCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGG...TGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | TTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCTAATGCGGTCCCCAGGGTaGATGGCGTTTCGATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAYKGTRYRFSHQKISTLMRSPG*MAFRLL Trigger: CAACAATCGAAACGCCATCCACCCTGGGGACCGCAT...TAGAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGGGGCCAGGGGACTTaGAGATACTGTTACTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LENKYCVASQFLLKLLHWWGQGT*RYCYCA Trigger: GGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCA...CCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGGCAAGGTGCGTTTCTTaGTGGTGGCCTTCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVARCVS*WWPSPW Trigger: CCATGGAGAAGGCCACCACCAAGAAACGCACCTTGC...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGAACCTGACCTTCTGCTaGCAGGGGAACGGATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVNLTFC*QGNGSI Trigger: TATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTT...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGAAATCCGTCTGTGACTaGCTCAGGCCGGCTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVKSVCD*LRPAVD Trigger: ATCTACAGCCGGCCTGAGGCAGTCACAGACGGATTT...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340552.4 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCATTTCAACTCTAATGTaGACCGCTGGAAATCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTISTLM*TAGNHF Trigger: AAAATGATTTCCAGCGGTCCACATTAGAGTTGAAAT...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTGGTGAGGGAATCCTaGCATTCTGAACACCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVLVRES*HSEHPP Trigger: TGGCGGGTGTTCAGAATGCCAGGATTCCCTCACCAA...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGCATAGTACCAGTTGGTaGGGGAATCCTGGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVHSTSW*GNPGIL Trigger: CAGAATGCCAGGATTCCCTCACCAACTGGTACTATG...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | TTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCTAGAAGTAAGCCGGGACTaGCAAGTAACTCCCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAYKGTRYRFSHQKISTLEVSRD*QVTPHL Trigger: AAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTC...TAGAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340552.4 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCTAGGAACGGATCCATACTaGGCAGAAAGTCCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAYKGTRYRFSHQKISTLGTDPY*AESPSV Trigger: CACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCC...TAGAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR TCA 90 bp | TTAGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGCATAGTACCAGTTGGTaGGGGAATCCTGGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LENKYCVASQFLLKLLHWHSTSW*GNPGIL Trigger: CAGAATGCCAGGATTCCCTCACCAACTGGTACTATG...CCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCTAGTGTTACTGAAGGACTaGGGTCCTTGGCCTATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAYKGTRYRFSHQKISTLVLLKD*GPWPIK Trigger: CTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACAC...TAGAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGAAGGACTGCGGTCCTTaGCCTATAAAGGAACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKQILCSFTISPQAFTLVKDCGP*PIKEQG Trigger: ACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTT...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGGCTGTGAATAGCTGCTaGAACAACGAAGGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LENKYCVASQFLLKLLHWAVNSC*NNEGIL Trigger: CAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGC...CCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS CCA 90 bp | GGACTCCAGGCCACTTGGCCCCCAGCAGATTCCCACAGGGGCTCATaGCTGGGATGGCTCCTCCCTAGTTCTCAGAAGCTCAGGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLQATWPPADSHRGS*LGWLLPSSQKLRRP Trigger: GGGCCGCCTGAGCTTCTGAGAACTAGGGAGGAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333611.8 ENST00000425203.1 |
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| CDS GCA 90 bp | TTCCCACACCAGATAGACAGGCTCAGCTGCAAATCCGTCTGTGACTaGCTCAGGCCGGCTGTAGATGGCCACCATGACAGGCCCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPHQIDRLSCKSVCD*LRPAVDGHHDRPGA Trigger: AGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGCAGTCACAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000333611.8 ENST00000340552.4 ENST00000425203.1 |
||
| CDS CCA 90 bp | CTGGGATGGCTCCTCCCTAGTTCTCAGAAGCTCAGGCGGCCCCTCTaGACTCCGAGAAAACGACCTCTCTGTGGAGGCTACACACACACT | + |
|
Preference number: 5 (lower is better) Translates to: LGWLLPSSQKLRRPL*TPRKRPLCGGYTHT Trigger: AGTGTGTGTGTAGCCTCCACAGAGAGGTCGTTTTCTCGGAGTCCAGAGGGGCCGCCTGAGCTTCTGAGAACTAGGGAGGAGCCATCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333611.8 ENST00000425203.1 |
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| CDS CCA 90 bp | CCGTGTAGCGCTTCTTGCGGTCGTTCTTGCGCAAGGTGCGTTTCTTaGTGGTGGCCTTCTCCATGGGGGCCCTTTTCCTCTCTTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: PCSASCGRSCARCVS*WWPSPWGPFSSLPL Trigger: TAGTGGAAGAGAGGAAAAGGGCCCCCATGGAGAAGGCCACCACCAAGAAACGCACCTTGCGCAAGAACGACCGCAAGAAGCGCTACACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000331728.9 ENST00000333611.8 ENST00000340552.4 ENST00000406516.5 ENST00000482270.5 |
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| CDS TCA 90 bp | GGTGTACAAAGGGAGGAAGGAAGTGAGTTATCACTGTTGCTGGAGTaGGGACAGGGGTGGGTGAATGACCTCCAAGCAAGGCCCCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVQREEGSELSLLLE*GQGWVNDLQARPPS Trigger: TGACGGGGGCCTTGCTTGGAGGTCATTCACCCACCCCTGTCCTCACTCCAGCAACAGTGATAACTCACTTCCTTCCTCCCTTTGTACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465937.1 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACAGCTGGTCCAGGCGTaGGGAGACGGGGTCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTQLVQA*GDGVMF Trigger: GAACATGACCCCGTCTCCCAACGCCTGGACCAGCTG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTGGGGCCAGGGGACTaGGAGATACTGTTACTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTLGPGD*EILLLR Trigger: GCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCGGAGGCGATTCCTTaGGCAAACCTGACCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTPEAIP*ANLTFC Trigger: GCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACGCAAGGTGCGTTTCTaGGTGGTGGCCTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTRKVRF*VVAFSM Trigger: CATGGAGAAGGCCACCACCAAGAAACGCACCTTGCG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGTTACTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATCTGGGGCCAGGGGACTaGGAGATACTGTTACTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLLKDCGPWPIKEQGIDLGPGD*EILLLR Trigger: GCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAG...ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAGCCACCACCACAGTCTaGTCCAACTTGATGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTATTTV*SNLMRQ Trigger: CTGCCTCATCAAGTTGGACAAGACTGTGGTGGTGGC...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS TCA 90 bp | CTGGAAGCACTGTCAATGGACTCTGAAGACCAAGAGGGGCAGATATaGAGGGATTCACTCACCATAAAAGGCCCTGTCATCAGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEALSMDSEDQEGQI*RDSLTIKGPVISRE Trigger: CTCCCTGCTGATGACAGGGCCTTTTATGGTGAGTGAATCCCTTCATATCTGCCCCTCTTGGTCTTCAGAGTCCATTGACAGTGCTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462625.1 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATGTACCATATCTGGCTaGGAGCAATGTGGTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTCTISG*EQCGPH Trigger: GTGGGGACCACATTGCTCCAAGCCAGATATGGTACA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCGTGCCAGGTTTCGTaGACAGTCCTGTACCATATC | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTPCQVS*TVLYHI Trigger: GATATGGTACAGGACTGTCAACGAAACCTGGCACGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331728.9 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAATGGCGTTTCGATTGTaGGGACTGATGTGCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTMAFRL*GLMCIR Trigger: CCGGATGCACATCAGTCCCAACAATCGAAACGCCAT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAAACTTGATGAGGCAGTaGTGCGAGTTCAGATCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTNLMRQ*CEFRSR Trigger: CCGGGATCTGAACTCGCACAACTGCCTCATCAAGTT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAACTTGATGAGGCAGTaGTGCGAGTTCAGATCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTNLMRQ*CEFRSR Trigger: CCGGGATCTGAACTCGCACAACTGCCTCATCAAGTT...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTGTTACTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATCGCAAGGTGCGTTTCTaGGTGGTGGCCTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LVLLKDCGPWPIKEQGIDRKVRF*VVAFSM Trigger: CATGGAGAAGGCCACCACCAAGAAACGCACCTTGCG...ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATTCTTGCGGTCGTTCTaGCGCAAGGTGCGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTFLRSF*RKVRFL Trigger: CAAGAAACGCACCTTGCGCAAGAACGACCGCAAGAA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCAGGAGCTAATGAGTaGGGAGAGCAAACATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTPGANE*GEQTWE Trigger: CTCCCATGTTTGCTCTCCCAACTCATTAGCTCCTGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACTGATGTGCATCCGGTaGACCTCTTTCACTTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTLMCIR*TSFTCT Trigger: TGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGCTGATGTGCATCCGGTaGACCTCTTTCACTTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQLMCIR*TSFTCT Trigger: TGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAG...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCCTGATGTGCATCCGGTaGACCTCTTTCACTTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTLMCIR*TSFTCT Trigger: TGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAG...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAACAGTCTTGTCCAACTaGATGAGGCAGTTGTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTTVLSN*MRQLCE Trigger: CTCGCACAACTGCCTCATCAAGTTGGACAAGACTGT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CAA 90 bp | GAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGACAGTCTTGTCCAACTaGATGAGGCAGTTGTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: EGLRSLAYKGTRYRFSHQTVLSN*MRQLCE Trigger: CTCGCACAACTGCCTCATCAAGTTGGACAAGACTGT...CTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | CTGGTGTTACTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATGCCACCACCACAGTCTaGTCCAACTTGATGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LVLLKDCGPWPIKEQGIDATTTV*SNLMRQ Trigger: CTGCCTCATCAAGTTGGACAAGACTGTGGTGGTGGC...ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACACCCCAGCCTCTTCCTTaGCTTGTGACTGTTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTPQPLP*LVTVCF Trigger: GAAACAAACAGTCACAAGCAAAGGAAGAGGCTGGGG...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS GCA 90 bp | CTCCTTGGAGGTCCTTATCCAACTATATTGTGTCTCCTCTCTGCCTaGCTCTCCTCCCACTCCCAACGTTCAACTATTAAGTCTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LLGGPYPTILCLLSA*LSSHSQRSTIKSLR Trigger: CCTCAAAGACTTAATAGTTGAACGTTGGGAGTGGGAGGAGAGGCAGGCAGAGAGGAGACACAATATAGTTGGATAAGGACCTCCAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACATCCTCAATGATCACCTaGCAGCTCATACAGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTSSMIT*QLIQAK Trigger: CTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGA...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CAA 90 bp | CTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCTCCTCAATGATCACCTaGCAGCTCATACAGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LKDCGPWPIKEQGIDSPTSSMIT*QLIQAK Trigger: CTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGA...GGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | CTGGTGTTACTGAAGGACTGCGGTCCTTGGCCTATAAAGGAACAAGGTATAGATACAGTCTTGTCCAACTaGATGAGGCAGTTGTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVLLKDCGPWPIKEQGIDTVLSN*MRQLCE Trigger: CTCGCACAACTGCCTCATCAAGTTGGACAAGACTGT...ATCTATACCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTCAGTAACACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | CGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAATGGCGTTTCGATTGTaGGGACTGATGTGCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLAYKGTRYRFSHQKISMAFRL*GLMCIR Trigger: CCGGATGCACATCAGTCCCAACAATCGAAACGCCAT...TGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | TTAGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGCAGCTGGTCCAGGCGTaGGGAGACGGGGTCATGTTC | + |
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Preference number: 5 (lower is better) Translates to: LENKYCVASQFLLKLLHWQLVQA*GDGVMF Trigger: GAACATGACCCCGTCTCCCAACGCCTGGACCAGCTG...CCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | CGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCATTCTTGCGGTCGTTCTaGCGCAAGGTGCGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLAYKGTRYRFSHQKISFLRSF*RKVRFL Trigger: CAAGAAACGCACCTTGCGCAAGAACGACCGCAAGAA...TGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | CGGTCCTTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAGAAGGACTGCGGTCCTaGGCCTATAAAGGAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLAYKGTRYRFSHQKISEGLRS*AYKGTR Trigger: CCTTGTTCCTTTATAGGCCAAGGACCGCAGTCCTTC...TGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAAGGACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS TCA 90 bp | CTGCCTGCCTCTCCTCCCACTCCCAACGTTCAACTATTAAGTCTTTaGGGGAAGGATCTTACCTTTCACTTAGTAGGTGCTCAATTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LPASPPTPNVQLLSL*GKDLTFHLVGAQLI Trigger: TATCAATTGAGCACCTACTAAGTGAAAGGTAAGATCCTTCCCTCAAAGACTTAATAGTTGAACGTTGGGAGTGGGAGGAGAGGCAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS CCA 90 bp | ACTCTTTCACTCTCTGCCCTAGAGCTTCCAAAGGAAGTGTCAGATTaGTACCTCCTGTCATTTCTGAGACTGCACAAAACTGTTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSLSALELPKEVSD*YLLSFLRLHKTVLV Trigger: GACCAAAACAGTTTTGTGCAGTCTCAGAAATGACAGGAGGTACCAATCTGACACTTCCTTTGGAAGCTCTAGGGCAGAGAGTGAAAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS-3UTR CAA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGCCGGAGGCGATTCCTTaGGCAAACCTGACCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKQILCSFTISPQAFTLVPEAIP*ANLTFC Trigger: GCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGG...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | CCAGGAAGGACAGGATCTGGAGTAGAAAGGGGGAGCATCACTGACTTTTTCACAACTTTTTCACACCCTTaGAGCCATCAGTCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGRTGSGVERGSITDFFTTFSHP*SHQSFF Trigger: AAAGAAAGACTGATGGCTCAAAGGGTGTGAAAAAGT...TGTGAAAAAGTCAGTGATGCTCCCCCTTTCTACTCCAGATCCTGTCCTTCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000333611.8 |
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| CDS-3UTR CAA 90 bp | TGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGTTACTGAAGGACTGCTCCTCAATGATCACCTaGCAGCTCATACAGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSFTISPQAFTLVLLKDCSSMIT*QLIQAK Trigger: CTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGA...GCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | TTAGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGCCGGAGGCGATTCCTTaGGCAAACCTGACCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LENKYCVASQFLLKLLHWPEAIP*ANLTFC Trigger: GCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGG...CCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | TTAGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGCGCAAGGTGCGTTTCTaGGTGGTGGCCTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LENKYCVASQFLLKLLHWRKVRF*VVAFSM Trigger: CATGGAGAAGGCCACCACCAAGAAACGCACCTTGCG...CCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | AGAAAACAAATACTGTGTAGCTTCACAATTTCTCCTCAAGCTTTTACACTGGTGATGGCGTTTCGATTGTaGGGACTGATGTGCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RKQILCSFTISPQAFTLVMAFRL*GLMCIR Trigger: CCGGATGCACATCAGTCCCAACAATCGAAACGCCAT...CACCAGTGTAAAAGCTTGAGGAGAAATTGTGAAGCTACACAGTATTTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS-3UTR CAA 90 bp | TTGGCCTATAAAGGAACAAGGTATAGATTCTCCCACCAGAAAATTTCAACTCTAAACTTGATGAGGCAGTaGTGCGAGTTCAGATCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LAYKGTRYRFSHQKISTLNLMRQ*CEFRSR Trigger: CCGGGATCTGAACTCGCACAACTGCCTCATCAAGTT...TAGAGTTGAAATTTTCTGGTGGGAGAATCTATACCTTGTTCCTTTATAGGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340552.4 ENST00000406516.5 |
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| CDS GCA 90 bp | AACTTTCTTTTAATGGCTGTGTTTCTGTGTCCTATCCAGATTACTTaGTGCTATGTCTTTACCTCTCTCTTCTCCAACCTGTACATATGT | + |
|
Preference number: 5 (lower is better) Translates to: NFLLMAVFLCPIQIT*CYVFTSLFSNLYIC Trigger: ACATATGTACAGGTTGGAGAAGAGAGAGGTAAAGACATAGCAGCAAGTAATCTGGATAGGACACAGAAACACAGCCATTAAAAGAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482270.5 |
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| CDS GCA 72 bp | GGCGCGGGAAGACCACAGCCCCAGGCGCGAACGGGATaGACCGCCTACGGCGCCCTGGGAGGACCAAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: GAGRPQPQARTG*TAYGALGGPNH Trigger: GTGGTTTGGTCCTCCCAGGGCGCCGTAGGCGGTGCATCCCGTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS CCA 72 bp | GCCACTTGGCCCCCAGCAGATTCCCACAGGGGCTCATaGCTGGGATGGCTCCTCCCTAGTTCTCAGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATWPPADSHRGS*LGWLLPSSQKL Trigger: GAGCTTCTGAGAACTAGGGAGGAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333611.8 ENST00000425203.1 |
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| CDS CCA 72 bp | CTCCTCCCTAGTTCTCAGAAGCTCAGGCGGCCCCTCTaGACTCCGAGAAAACGACCTCTCTGTGGAGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LLPSSQKLRRPL*TPRKRPLCGGY Trigger: GTAGCCTCCACAGAGAGGTCGTTTTCTCGGAGTCCAGAGGGGCCGCCTGAGCTTCTGAGAACTAGGGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333611.8 ENST00000425203.1 |
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| CDS GCA 72 bp | CCGGAGGCGATTCCTTTGGCAAACCTGACCTTCTGCTaGCAGGGGAACGGATCCATACTGCGCAGAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PEAIPLANLTFC*QGNGSILRRKS Trigger: GGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000331728.9 ENST00000333611.8 ENST00000340552.4 ENST00000406516.5 |
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| CDS GCA 72 bp | CAGATAGACAGGCTCAGCTGCAAATCCGTCTGTGACTaGCTCAGGCCGGCTGTAGATGGCCACCATGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: QIDRLSCKSVCD*LRPAVDGHHDR Trigger: CCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGCAGTCACAGACGGATTTGCAGCTGAGCCTGTCTATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000333611.8 ENST00000340552.4 ENST00000425203.1 |
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| CDS CCA 72 bp | CCGTGCCAGGTTTCGTTGACAGTCCTGTACCATATCTaGCTTGGAGCAATGTGGTCCCCACAGCCTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: PCQVSLTVLYHI*LGAMWSPQPGH Trigger: GTGTCCAGGCTGTGGGGACCACATTGCTCCAAGCCAGATATGGTACAGGACTGTCAACGAAACCTGGCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000462625.1 |
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| CDS TCA 72 bp | CTGAACACCGGAAGCAAGAGCCGTGCCAGGTTTCGTTaGCAGTCCTGTACCATATCTGGCTTGGAGCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: LNTGSKSRARFR*QSCTISGLEQC Trigger: ACATTGCTCCAAGCCAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGTGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331728.9 ENST00000462625.1 |
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| CDS TCA 72 bp | CCTGGCATTCTGAACACCGAAACAGGTCTCTGGAGGTaGAGTAAGCCGGGACTGACAAGTAACTCCCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: PGILNTETGLWR*SKPGLTSNSPS Trigger: AGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCAGAGACCTGTTTCGGTGTTCAGAATGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000333611.8 ENST00000340552.4 ENST00000425203.1 |
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| CDS CAA 90 bp | TCTCTTCTCCAACCTGTACATATGTGTTGTCAGATGGCTCAGGGGTaGACAGCCACATTCTTGACCTCAAGGCTTCTCTCACCCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLLQPVHMCCQMAQG*TATFLTSRLLSPLC Trigger: GCACAGGGGTGAGAGAAGCCTTGAGGTCAAGAATGTGGCTGTCAACCCCTGAGCCATCTGACAACACATATGTACAGGTTGGAGAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482270.5 |
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| CDS TCA 72 bp | CTGTCAATGGACTCTGAAGACCAAGAGGGGCAGATATaGAGGGATTCACTCACCATAAAAGGCCCTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LSMDSEDQEGQI*RDSLTIKGPVI Trigger: GATGACAGGGCCTTTTATGGTGAGTGAATCCCTTCATATCTGCCCCTCTTGGTCTTCAGAGTCCATTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425203.1 ENST00000462625.1 |
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| CDS CAA 90 bp | GCTGCTATGTCTTTACCTCTCTCTTCTCCAACCTGTACATATGTGTaGTCAGATGGCTCAGGGGTTGACAGCCACATTCTTGACCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: AAMSLPLSSPTCTYV*SDGSGVDSHILDLK Trigger: CTTGAGGTCAAGAATGTGGCTGTCAACCCCTGAGCCATCTGACAACACATATGTACAGGTTGGAGAAGAGAGAGGTAAAGACATAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482270.5 |
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| CDS CAA 90 bp | AAAGACAACCTAAGTATATCCTCCTCTCAGCCTGTAACACTCTCCTaGGAGGTCCTTATCCAACTATATTGTGTCTCCTCTCTGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KDNLSISSSQPVTLS*EVLIQLYCVSSLPA Trigger: GGCAGGCAGAGAGGAGACACAATATAGTTGGATAAGGACCTCCAAGGAGAGTGTTACAGGCTGAGAGGAGGATATACTTAGGTTGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS CAA 72 bp | ACTCTCTGCCCTAGAGCTTCCAAAGGAAGTGTCAGATaGGTACCTCCTGTCATTTCTGAGACTGCACAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: TLCPRASKGSVR*VPPVISETAQN Trigger: GTTTTGTGCAGTCTCAGAAATGACAGGAGGTACCAATCTGACACTTCCTTTGGAAGCTCTAGGGCAGAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS CAA 90 bp | TCTGCCTGCCTCTCCTCCCACTCCCAACGTTCAACTATTAAGTCTTaGAGGGAAGGATCTTACCTTTCACTTAGTAGGTGCTCAATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SACLSSHSQRSTIKS*REGSYLSLSRCSID Trigger: ATCAATTGAGCACCTACTAAGTGAAAGGTAAGATCCTTCCCTCAAAGACTTAATAGTTGAACGTTGGGAGTGGGAGGAGAGGCAGGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS CAA 90 bp | CACTCTTTCACTCTCTGCCCTAGAGCTTCCAAAGGAAGTGTCAGATaGGTACCTCCTGTCATTTCTGAGACTGCACAAAACTGTTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HSFTLCPRASKGSVR*VPPVISETAQNCFG Trigger: ACCAAAACAGTTTTGTGCAGTCTCAGAAATGACAGGAGGTACCAATCTGACACTTCCTTTGGAAGCTCTAGGGCAGAGAGTGAAAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS TCA 72 bp | CCTCTCTCTGCCAGCCTATTCCAGAGTCTCCTTTTCTaGTTCCCTAAAGACAACCTAAGTATATCCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLSASLFQSLLF*FPKDNLSISSS Trigger: AGAGGAGGATATACTTAGGTTGTCTTTAGGGAATCAGAAAAGGAGACTCTGGAATAGGCTGGCAGAGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS CAA 72 bp | CTCTCCTCCCACTCCCAACGTTCAACTATTAAGTCTTaGAGGGAAGGATCTTACCTTTCACTTAGTAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSSHSQRSTIKS*REGSYLSLSRC Trigger: GCACCTACTAAGTGAAAGGTAAGATCCTTCCCTCAAAGACTTAATAGTTGAACGTTGGGAGTGGGAGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462625.1 |
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| CDS CAA 72 bp | TCTTTACCTCTCTCTTCTCCAACCTGTACATATGTGTaGTCAGATGGCTCAGGGGTTGACAGCCACATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLPLSSPTCTYV*SDGSGVDSHIL Trigger: AAGAATGTGGCTGTCAACCCCTGAGCCATCTGACAACACATATGTACAGGTTGGAGAAGAGAGAGGTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482270.5 |
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| CDS GCA 72 bp | TTAATGGCTGTGTTTCTGTGTCCTATCCAGATTACTTaGTGCTATGTCTTTACCTCTCTCTTCTCCAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: LMAVFLCPIQIT*CYVFTSLFSNL Trigger: CAGGTTGGAGAAGAGAGAGGTAAAGACATAGCAGCAAGTAATCTGGATAGGACACAGAAACACAGCCATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482270.5 |
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