RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LIMK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106683

Ensembl transcript IDs: ENST00000336180.7, ENST00000418310.5, ENST00000435201.5, ENST00000476792.1, ENST00000483414.1, ENST00000486361.5, ENST00000491052.5, ENST00000538333.3

Found 536 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCTGGTGGACACCTGCCCGGTCCACTGTGCCTATCCTCTCACTaGCGGAGCCGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCT +
Preference number: 1 (lower is better)
Translates to: AAGGHLPGPLCLSSH*RSRLLPIAGQGTAA
Trigger: AGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCGGCTCCGGCAGTGAGAGGATAGGCACAGTGGACCGGGCAGGTGTCCACCAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CCA 90 bp GGCATGGTTCGGAGGCTGCCTCCTGGCCCAGCCTCCAGGGAGCTATaGACCAGACAGGTGGAGCGTGAACAGGGTTGCTGGGGCAGCGGC +
Preference number: 1 (lower is better)
Translates to: GMVRRLPPGPASREL*TRQVEREQGCWGSG
Trigger: GCCGCTGCCCCAGCAACCCTGTTCACGCTCCACCTGTCTGGTCCATAGCTCCCTGGAGGCTGGGCCAGGAGGCAGCCTCCGAACCATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CCA 90 bp GGCCTCTGCCCTGATGTGCGCCCTCCCACGCACCCAAGCGTTATATaGGGCATGGTTCGGAGGCTGCCTCCTGGCCCAGCCTCCAGGGAG +
Preference number: 1 (lower is better)
Translates to: GLCPDVRPPTHPSVI*GMVRRLPPGPASRE
Trigger: CTCCCTGGAGGCTGGGCCAGGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAGGGCAGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR GCA 90 bp AGGGGCTCTGAGATGACTGCAGGGGCTGAGCTGCTGGTGGACACCTaGCCGGTCCACTGTGCCTATCCTCTCACTGCCGGAGCCGGCTCC +
Preference number: 1 (lower is better)
Translates to: RGSEMTAGAELLVDT*PVHCAYPLTAGAGS
Trigger: GGAGCCGGCTCCGGCAGTGAGAGGATAGGCACAGTGGACCGGGCAGGTGTCCACCAGCAGCTCAGCCCCTGCAGTCATCTCAGAGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR GCA 90 bp GCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTaGCTCCTGGCCCAGCCTCCAGGGAGCTATGGACCAGACAGGTGG +
Preference number: 1 (lower is better)
Translates to: ALPRTQALYGAWFGG*LLAQPPGSYGPDRW
Trigger: CCACCTGTCTGGTCCATAGCTCCCTGGAGGCTGGGCCAGGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CCA 90 bp GCCCTGATGTGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATaGTTCGGAGGCTGCCTCCTGGCCCAGCCTCCAGGGAGCTATGGA +
Preference number: 1 (lower is better)
Translates to: ALMCALPRTQALYGA*FGGCLLAQPPGSYG
Trigger: TCCATAGCTCCCTGGAGGCTGGGCCAGGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR TCA 90 bp CGCTTCTTGCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTaGGTCTTCTCGTCCACCATGAGACGCGCCAGCCCGAAGTCAGCC +
Preference number: 1 (lower is better)
Translates to: RFLRSGFLRLRRPSG*VFSSTMRRASPKSA
Trigger: GGCTGACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR GCA 90 bp CTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGTGTaGAGCTGGGCCGGCTCTGGGCCACGGCAGAGAGAAGGCAGGGGA +
Preference number: 1 (lower is better)
Translates to: LPRQRLQQGESMVCV*SWAGSGPRQREGRG
Trigger: TCCCCTGCCTTCTCTCTGCCGTGGCCCAGAGCCGGCCCAGCTGCACACACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CCA 90 bp AGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGTGTGCAGCTaGGCCGGCTCTGGGCCACGGCAGAGAGAAGGCAGGGGAAGCGGT +
Preference number: 1 (lower is better)
Translates to: RQRLQQGESMVCVCS*AGSGPRQREGRGSG
Trigger: ACCGCTTCCCCTGCCTTCTCTCTGCCGTGGCCCAGAGCCGGCCCAGCTGCACACACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR GCA 90 bp GTTCCTGGGAACACAGACACCTGGAACTTGGCCTCTGCCCTGATGTaGGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGA +
Preference number: 1 (lower is better)
Translates to: VPGNTDTWNLASALM*ALPRTQALYGAWFG
Trigger: TCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAGGGCAGAGGCCAAGTTCCAGGTGTCTGTGTTCCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CCA 90 bp GATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACTaGCTGTCCATGCTCTTGATGATGCCCCGGAGCGTGCCGCCCTTG +
Preference number: 1 (lower is better)
Translates to: DAMSLAKLTLWLHGY*LSMLLMMPRSVPPL
Trigger: CAAGGGCGGCACGCTCCGGGGCATCATCAAGAGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR GCA 90 bp ACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGGGACAGCCCTaGCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: TGPPAHARRSKRGQP*QDRGYSRARAWCVC
Trigger: ACACACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR TCA 90 bp ATTTGGTTCCTGGGAACACAGACACCTGGAACTTGGCCTCTGCCCTaGTGTGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGT +
Preference number: 1 (lower is better)
Translates to: IWFLGTQTPGTWPLP*CAPSHAPKRYMGHG
Trigger: ACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAGGGCAGAGGCCAAGTTCCAGGTGTCTGTGTTCCCAGGAACCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CCA 90 bp CCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGGCTTaGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGAAACAAAAA +
Preference number: 1 (lower is better)
Translates to: PQLHAPSRDPLHPEA*YLLLTKVALRKKQK
Trigger: TTTTTGTTTCTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR TCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCCCACTGTCCCAGCTaGGGGCCACCTCCCGCGGAG +
Preference number: 2 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPPHCPS*GPPPAE
Trigger: CTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGG...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
74% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR TCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGCCCCACTGTCCCAGCTaGGGGCCACCTCCCGCGGAG +
Preference number: 2 (lower is better)
Translates to: PARAPQLHAPSRDPLHPEPHCPS*GPPPAE
Trigger: CTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGG...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCAGCTGGGCCGGCTCTaGGCCACGGCAGAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPQLGRL*ATAERR
Trigger: CCTTCTCTCTGCCGTGGCCCAGAGCCGGCCCAGCTG...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR GCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGAGAGCGTGAACAGGGTTaGTGGGGCAGCGGCGTGTGG +
Preference number: 2 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGEREQG*WGSGVW
Trigger: CCACACGCCGCTGCCCCAGCAACCCTGTTCACGCTC...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR TCA 90 bp CAGGGTGGGCAGGCAGTCCGCTCTCGCCGCGCCGGTAGGTCTCCCAGAAACCTCGCACCTCCCCGTGGATaGGGTCCGACGGCCGGAAGA +
Preference number: 2 (lower is better)
Translates to: QGGQAVRSRRAGRSPRNLAPPRG*GPTAGR
Trigger: TCTTCCGGCCGTCGGACCTCATCCACGGGGAGGTGC...GAGGTTTCTGGGAGACCTACCGGCGCGGCGAGAGCGGACTGCCTGCCCACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR GCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGGAGCGTGAACAGGGTTaGTGGGGCAGCGGCGTGTGG +
Preference number: 2 (lower is better)
Translates to: PARAPQLHAPSRDPLHPEEREQG*WGSGVW
Trigger: CCACACGCCGCTGCCCCAGCAACCCTGTTCACGCTC...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp CTCGCCGCGCCGGTAGGTCTCCCAGAAACCTCTGTCCAGCTGCTCCAGCTGTGGCCCAGCACCTCCCCGTaGATGAGGTCCGACGGCCGG +
Preference number: 2 (lower is better)
Translates to: LAAPVGLPETSVQLLQLWPSTSP*MRSDGR
Trigger: CCGGCCGTCGGACCTCATCCACGGGGAGGTGCTGGG...CCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR GCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGAAGGCCCTCCAGCTCATaGAAGGAGAAGCAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGRPSSS*KEKQEG
Trigger: CCCCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCT...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR GCA 90 bp CTCGCCGCGCCGGTAGGTCTCCCAGAAACCTCTGTCCAGCTGCTCCAGCTGTGGAGGTGGCCGGCCAGGTaGATGCGGAGGGTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LAAPVGLPETSVQLLQLWRWPAR*MRRVSS
Trigger: GCTGGAGACCCTCCGCATGCACCTGGCCGGCCACCT...CCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGGCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR CCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGTCCCGCGGAGGAATCTaGTGGGGGTGGATTCTCCAG +
Preference number: 2 (lower is better)
Translates to: PARAPQLHAPSRDPLHPESRGGI*WGWILQ
Trigger: CTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGA...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCGCGTTATATGGGGCATaGTTCGGAGGCTGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPALYGA*FGGCLL
Trigger: CAGGAGGCAGCCTCCGAACCATGCCCCATATAACGC...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGGGAATCTGGTGGGGGTaGATTCTCCAGAGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: PARAPQLHAPSRDPLHPEGIWWG*ILQRWG
Trigger: TCCCCACCTCTGGAGAATCCACCCCCACCAGATTCC...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGCACCCAAGCGTTATATaGGGCATGGTTCGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: PARAPQLHAPSRDPLHPEHPSVI*GMVRRL
Trigger: CAGCCTCCGAACCATGCCCCATATAACGCTTGGGTG...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR GCA 90 bp TGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCAGCATGGTGTGTGTGTaGAGCTGGGCCGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: CALPRTQALYGAWFGGCLSMVCV*SWAGSG
Trigger: CCCAGAGCCGGCCCAGCTGCACACACACACCATGCT...GAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCTCCCCATTTGGTTCCTaGGAACACAGACACCTGGAA +
Preference number: 2 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPSPFGS*EHRHLE
Trigger: TTCCAGGTGTCTGTGTTCCCAGGAACCAAATGGGGA...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR TCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCGGACCCCCTTCACCCTaGGGCTTGGTACCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTGPPSP*GLVPAS
Trigger: AGAAGCAGGTACCAAGCCTCAGGGTGAAGGGGGTCC...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR GCA 90 bp CTCGCCGCGCCGGTAGGTCTCCCAGAAACCTCTGTCCAGCTGCTCCAGCTGTGGCAGGTAGTCAGGGTCTaGGTTCACCCGCCCGATGAT +
Preference number: 2 (lower is better)
Translates to: LAAPVGLPETSVQLLQLWQVVRV*VHPPDD
Trigger: ATCATCGGGCGGGTGAACGCAGACCCTGACTACCTG...CCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR CCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTCGCGGAGGAATCTGGTaGGGGTGGATTCTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSRGGIW*GWILQR
Trigger: CCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCG...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTTCCCGCGGAGGAATCTaGTGGGGGTGGATTCTCCAG +
Preference number: 2 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSSRGGI*WGWILQ
Trigger: CTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGA...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp TGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCGTGAACAGGGTTGCTaGGGCAGCGGCGTGTGGAAA +
Preference number: 2 (lower is better)
Translates to: CALPRTQALYGAWFGGCLREQGC*GSGVWK
Trigger: TTTCCACACGCCGCTGCCCCAGCAACCCTGTTCACG...GAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp TGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCTGGATTCTCCAGAGGTaGGGACAGGGGCAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: CALPRTQALYGAWFGGCLWILQR*GQGQLS
Trigger: ACTCAGCTGCCCCTGTCCCCACCTCTGGAGAATCCA...GAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTGGGAACACAGACACCTaGAACTTGGCCTCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSGNTDT*NLASAL
Trigger: CAGGGCAGAGGCCAAGTTCCAGGTGTCTGTGTTCCC...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR GCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTGTCCTCGATACCTGTTaGTACCTAGACACCCCCTGG +
Preference number: 2 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSVLDTC*YLDTPW
Trigger: CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGAC...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTTGGATTCTCCAGAGGTaGGGACAGGGGCAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPWILQR*GQGQLS
Trigger: ACTCAGCTGCCCCTGTCCCCACCTCTGGAGAATCCA...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGAAGCGGTCCACGGGGTaGGAGAAGGCAAGTCAGGGC +
Preference number: 2 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRKRSTG*EKASQG
Trigger: GCCCTGACTTGCCTTCTCCCACCCCGTGGACCGCTT...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp TGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCTATGGACCAGACAGGTaGAGCGTGAACAGGGTTGCT +
Preference number: 2 (lower is better)
Translates to: CALPRTQALYGAWFGGCLYGPDR*SVNRVA
Trigger: AGCAACCCTGTTCACGCTCCACCTGTCTGGTCCATA...GAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGGGAATCTGGTGGGGGTaGATTCTCCAGAGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWGIWWG*ILQRWG
Trigger: TCCCCACCTCTGGAGAATCCACCCCCACCAGATTCC...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR TCA 90 bp GAACACATCCACCTTCTCATCATAGCTGCGGCCGTTGATCATCTCAGGTGCCATTCTTCTCGTCCACCATaGGACGCGCCAGCCCGAAGT +
Preference number: 2 (lower is better)
Translates to: EHIHLLIIAAAVDHLRCHSSRPP*DAPARS
Trigger: ACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGA...ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR TCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCAGGTTCAAAGTGCACTaGGAAAGCTTCACAGTTTTA +
Preference number: 2 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTRFKVH*ESFTVL
Trigger: TAAAACTGTGAAGCTTTCTCAGTGCACTTTGAACCT...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CCA 90 bp GAACACATCCACCTTCTCATCATAGCTGCGGCCGTTGATCATCTCAGGTGCCATTTGAGGAACGTCCTCTaGGTCTCCTCGTCGAACCGG +
Preference number: 2 (lower is better)
Translates to: EHIHLLIIAAAVDHLRCHLRNVL*VSSSNR
Trigger: CCGGTTCGACGAGGAGACCCAGAGGACGTTCCTCAA...ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR CCA 90 bp GAACACATCCACCTTCTCATCATAGCTGCGGCCGTTGATCATCTCAGGTGCCATCACTCTCTGGCTCCATaGGTACTGGCTGTCCATGCT +
Preference number: 2 (lower is better)
Translates to: EHIHLLIIAAAVDHLRCHHSLAP*VLAVHA
Trigger: AGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTG...ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR CCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGTCCCCATTTGGTTCCTaGGAACACAGACACCTGGAA +
Preference number: 2 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKSPFGS*EHRHLE
Trigger: TTCCAGGTGTCTGTGTTCCCAGGAACCAAATGGGGA...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR TCA 72 bp CGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTaGGTCTTCTCGTCCACCATGAGACGCGCCAGCCCG +
Preference number: 3 (lower is better)
Translates to: RSGFLRLRRPSG*VFSSTMRRASP
Trigger: CGGGCTGGCGCGTCTCATGGTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR CCA 72 bp CCTGATGTGCGCCCTCCCACGCACCCAAGCGTTATATaGGGCATGGTTCGGAGGCTGCCTCCTGGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: PDVRPPTHPSVI*GMVRRLPPGPA
Trigger: GGCTGGGCCAGGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR GCA 72 bp CAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGTGTaGAGCTGGGCCGGCTCTGGGCCACGGCAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: QRLQQGESMVCV*SWAGSGPRQRE
Trigger: TTCTCTCTGCCGTGGCCCAGAGCCGGCCCAGCTGCACACACACACCATGCTCTCGCCCTGCTGTAACCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR GCA 72 bp GAGATGACTGCAGGGGCTGAGCTGCTGGTGGACACCTaGCCGGTCCACTGTGCCTATCCTCTCACTGCCGGA +
Preference number: 3 (lower is better)
Translates to: EMTAGAELLVDT*PVHCAYPLTAG
Trigger: TCCGGCAGTGAGAGGATAGGCACAGTGGACCGGGCAGGTGTCCACCAGCAGCTCAGCCCCTGCAGTCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CAA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTACAGACACCTGGAACTaGGCCTCTGCCCTGATGTGC +
Preference number: 3 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSTDTWN*ASALMC
Trigger: GCACATCAGGGCAGAGGCCAAGTTCCAGGTGTCTGT...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CAA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACTCACGGTGTGTCACCTaGATAGCCTGGCCGAAGCAG +
Preference number: 3 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHSRCVT*IAWPKQ
Trigger: CTGCTTCGGCCAGGCTATCAAGGTGACACACCGTGA...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR CAA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACAGCACCCCGATGAACTaGAGCACGTTGGGGTGTTCC +
Preference number: 3 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHSTPMN*STLGCS
Trigger: GGAACACCCCAACGTGCTCAAGTTCATCGGGGTGCT...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR CAA 90 bp GGTGTAGCGCTTCTTGCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGCGGAGCGTGCCGCCCTaGATGTACTCAGTGATGAAG +
Preference number: 3 (lower is better)
Translates to: GVALLAVWLLEAPQALRLRSVPP*MYSVMK
Trigger: CTTCATCACTGAGTACATCAAGGGCGGCACGCTCCG...CAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR CAA 90 bp CCGGCCAGGTGCATGCGGAGGGTCTCCAGCCAGTGTTCCAGCTTCACAAAGGATGCCACCACCACATTCTaGTTCTCGCGGACCAGGCAG +
Preference number: 3 (lower is better)
Translates to: PARCMRRVSSQCSSFTKDATTTF*FSRTRQ
Trigger: CTGCCTGGTCCGCGAGAACAAGAATGTGGTGGTGGC...ATCCTTTGTGAAGCTGGAACACTGGCTGGAGACCCTCCGCATGCACCTGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR GCA 72 bp AACACAGACACCTGGAACTTGGCCTCTGCCCTGATGTaGGCCCTCCCACGCACCCAAGCGTTATATGGGGCA +
Preference number: 3 (lower is better)
Translates to: NTDTWNLASALM*ALPRTQALYGA
Trigger: TGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAGGGCAGAGGCCAAGTTCCAGGTGTCTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR-3UTR CAA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGACAGACACCTGGAACTaGGCCTCTGCCCTGATGTGC +
Preference number: 3 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWTDTWN*ASALMC
Trigger: GCACATCAGGGCAGAGGCCAAGTTCCAGGTGTCTGT...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CCA 72 bp CCCCATGGGATCAGCCCTCTCTCTGCTTTGGGGGTTTaGAGAGTCCTCGATACCTGTTGCTACCTAGACACC +
Preference number: 3 (lower is better)
Translates to: PHGISPLSALGV*RVLDTCCYLDT
Trigger: GGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCTGATCCCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CCA 72 bp TGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATaGGTACTGGCTGTCCATGCTCTTGATGATGCCCCG +
Preference number: 3 (lower is better)
Translates to: CDVLGKAHSLAP*VLAVHALDDAP
Trigger: CGGGGCATCATCAAGAGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR CCA 72 bp CACGCTCCCTCAAGGGACCCCCTTCACCCTGAGGCTTaGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAG +
Preference number: 3 (lower is better)
Translates to: HAPSRDPLHPEA*YLLLTKVALRK
Trigger: CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CCA 72 bp ATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTaGCTCCATGGGTACTGGCTGTCCATGCTCTTGATG +
Preference number: 3 (lower is better)
Translates to: IPDAMSLAKLTL*LHGYWLSMLLM
Trigger: CATCAAGAGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
3UTR-3UTR CAA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGCCCCAGACTCCCCATTaGGTTCCTGGGAACACAGAC +
Preference number: 3 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKPQTPH*VPGNTD
Trigger: GTCTGTGTTCCCAGGAACCAAATGGGGAGTCTGGGG...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGAGGCCGGGGAGCCCAGTaGGCCAGCGCCCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGGRGAQ*ASARRP
Trigger: AGGTCTCCGGGCGCTGGCTCACTGGGCTCCCCGGCC...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCGACGCGGACGGTGTGTaGGTGCTCGGTGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPDADGV*VLGATA
Trigger: GGCTGTGGCACCGAGCACTCACACACCGTCCGCGTC...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGGCCGGGGAGCCCAGTaGGCCAGCGCCCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLGRGAQ*ASARRP
Trigger: AGGTCTCCGGGCGCTGGCTCACTGGGCTCCCCGGCC...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGAGAGAGCTCAGGGGGCTaGTCTCAGGCCCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGESSGG*SQAPAR
Trigger: ACGGGCTGGGGCCTGAGACCAGCCCCCTGAGCTCTC...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGAGGGCAACTCGCTTCCTaGAGCTGGGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGGQLAS*SWGCPA
Trigger: GGCAGGGCAGCCCCAGCTCCAGGAAGCGAGTTGCCC...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR TCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACTGCCCAGGAAGCAGTaGCCGGAGTGGAGCCACGTG +
Preference number: 4 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGLPRKQ*PEWSHV
Trigger: CACGTGGCTCCACTCCGGTCACTGCTTCCTGGGCAG...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGCCCAGGTCCTTGCGCTaGGAGGCCGGGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVPRSLR*EAGEPS
Trigger: ACTGGGCTCCCCGGCCTCCCAGCGCAAGGACCTGGG...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGCCCAGGTCCTTGCGCTaGGAGGCCGGGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVPRSLR*EAGEPS
Trigger: ACTGGGCTCCCCGGCCTCCCAGCGCAAGGACCTGGG...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGCCCAGCACCTCCCCGTaGATGAGGTCCGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVPSTSP*MRSDGR
Trigger: CCGGCCGTCGGACCTCATCCACGGGGAGGTGCTGGG...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGCCCAGCACCTCCCCGTaGATGAGGTCCGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWPSTSP*MRSDGR
Trigger: CCGGCCGTCGGACCTCATCCACGGGGAGGTGCTGGG...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGGGCCCAGTGGCAGGTaGCCGGCCAGGTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLGPSGR*PARCMR
Trigger: CCGCATGCACCTGGCCGGCCACCTGCCACTGGGCCC...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGCACCTCCCCGTGGATaGGGTCCGACGGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVAPPRG*GPTAGR
Trigger: TCTTCCGGCCGTCGGACCTCATCCACGGGGAGGTGC...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCGCAGGCCCTCAGGCTaGGTCTTCTCGTCCACCATG +
Preference number: 4 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPRRPSG*VFSSTM
Trigger: CATGGTGGACGAGAAGACTCAGCCTGAGGGCCTGCG...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCACCCCACTGTCCCAGCTaGGGGCCACCTCCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPPHCPS*GPPPAE
Trigger: CTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGG...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCAGACAGGTGGAGCGTaGACAGGGTTGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPQTGGA*TGLLGQ
Trigger: CTGCCCCAGCAACCCTGTTCACGCTCCACCTGTCTG...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGTGCCTATCCTCTCACTaGCGGAGCCGGCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PARAPQLHAPSRDPLHPECLSSH*RSRLLP
Trigger: GGGGAGGAGCCGGCTCCGGCAGTGAGAGGATAGGCA...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGAGAGCTCAGGGGGCTaGTCTCAGGCCCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWESSGG*SQAPAR
Trigger: ACGGGCTGGGGCCTGAGACCAGCCCCCTGAGCTCTC...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGTGCCCGCCTCCCCGCTaGGAGTATAAGCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PARAPQLHAPSRDPLHPECPPPR*EYKPES
Trigger: GCTCTCCGGCTTATACTCCCAGCGGGGAGGCGGGCA...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGCAGCTGGGCCGGCTCTaGGCCACGGCAGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWQLGRL*ATAERR
Trigger: CCTTCTCTCTGCCGTGGCCCAGAGCCGGCCCAGCTG...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACGACGCGGACGGTGTGTaGGTGCTCGGTGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDDADGV*VLGATA
Trigger: GGCTGTGGCACCGAGCACTCACACACCGTCCGCGTC...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGCGCAACAGCGCACGGTaGTGGGGAAGAAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVRNSAR*WGRSSG
Trigger: CCCCGAGCTTCTTCCCCATCACCGTGCGCTGTTGCG...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CAGGGTGGGCAGGCAGTCCGCTCTCGCCGCGCCGGTAGGTCTCCCAGAAACCTCCGCAACAGCGCACGGTaGTGGGGAAGAAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QGGQAVRSRRAGRSPRNLRNSAR*WGRSSG
Trigger: CCCCGAGCTTCTTCCCCATCACCGTGCGCTGTTGCG...GAGGTTTCTGGGAGACCTACCGGCGCGGCGAGAGCGGACTGCCTGCCCACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCCCCCACTGTCCCAGCTaGGGGCCACCTCCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTPHCPS*GPPPAE
Trigger: CTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGG...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGCGGACGGTGTGTGAGTaGTCGGTGCCACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVRTVCE*SVPQPG
Trigger: ACCGGGCTGTGGCACCGAGCACTCACACACCGTCCG...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACGGCCGGCCAGGTGCATaGGGAGGGTCTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDGRPGA*GGSPAS
Trigger: ACTGGCTGGAGACCCTCCGCATGCACCTGGCCGGCC...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCAGGTGGCCGGCCAGGTaGATGCGGAGGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIRWPAR*MRRVSS
Trigger: GCTGGAGACCCTCCGCATGCACCTGGCCGGCCACCT...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGAGGTGGCCGGCCAGGTaGATGCGGAGGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLRWPAR*MRRVSS
Trigger: GCTGGAGACCCTCCGCATGCACCTGGCCGGCCACCT...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGTGGCCGGCCAGGTaGATGCGGAGGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDRWPAR*MRRVSS
Trigger: GCTGGAGACCCTCCGCATGCACCTGGCCGGCCACCT...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCACGCACAGGAGGAGGCTaGAGCCGCGTGGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPRTGGG*SRVGAR
Trigger: CCTGGCACCCACGCGGCTGCAGCCTCCTCCTGTGCG...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS-3UTR CCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCGCCCGCAGTACAGCTTaGAGTGCTCCACCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPARSTA*SAPPAC
Trigger: ACACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGC...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGCCCGGATCCACTCCCTaGACGCGGACGGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVPGSTP*TRTVCE
Trigger: CTCACACACCGTCCGCGTCCAGGGAGTGGATCCGGG...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGCCGGAAGATGCGGTGTaGCCGGCAGACTACGCGGAG +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWPEDAV*PADYAE
Trigger: CTCCGCGTAGTCTGCCGGCCACACCGCATCTTCCGG...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GGTGTAGCGCTTCTTGCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGGGGCCCAGTGGCAGGTaGCCGGCCAGGTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: GVALLAVWLLEAPQALRLGPSGR*PARCMR
Trigger: CCGCATGCACCTGGCCGGCCACCTGCCACTGGGCCC...CAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGCAGCTGAGTGGCCCTaGCTCAGTCGGGGACCTCAG +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVAAEWP*LSRGPQ
Trigger: CTGAGGTCCCCGACTGAGCCAGGGCCACTCAGCTGC...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGACAGGGGCAGCTGAGTaGCCCTGGCTCAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVTGAAE*PWLSRG
Trigger: TCCCCGACTGAGCCAGGGCCACTCAGCTGCCCCTGT...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGTCACGGTTCCTGGATaGGGGTGGGTGGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVVTVPG*GWVGPT
Trigger: GGTGGGACCCACCCACCCCCATCCAGGAACCGTGAC...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGAGGGTGGGGCCAGCGTaGCTGCAGCGCACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLRVGPA*LQRTGG
Trigger: TCCTCCTGTGCGCTGCAGCCACGCTGGCCCCACCCT...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS-3UTR TCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGGATGGACACCAGGGTaGCGGTGTGGGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQGWTPG*RCGAGG
Trigger: CCCACCTGCCCCACACCGTCACCCTGGTGTCCATCC...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGATGGACACCAGGGTaGCGGTGTGGGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWGWTPG*RCGAGG
Trigger: CCCACCTGCCCCACACCGTCACCCTGGTGTCCATCC...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCAGTCCACGCTTGCCATaGGATGAGGCTGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPSPRLP*DEAGMD
Trigger: GTCCATCCCAGCCTCATCTCATGGCAAGCGTGGACT...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGGGCCGGGGAGCCCAGTaGGCCAGCGCCCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVGRGAQ*ASARRP
Trigger: AGGTCTCCGGGCGCTGGCTCACTGGGCTCCCCGGCC...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGCACCTCCCCGTGGATaGGGTCCGACGGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPAPPRG*GPTAGR
Trigger: TCTTCCGGCCGTCGGACCTCATCCACGGGGAGGTGC...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACTGCGGTCTGGCTTCTTaGGGCTCCGCAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDCGLAS*GSAGPQ
Trigger: CTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCA...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGCAGACAGGTGGAGCGTaGACAGGGTTGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWQTGGA*TGLLGQ
Trigger: CTGCCCCAGCAACCCTGTTCACGCTCCACCTGTCTG...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCACTTGGCCTCTGCCCTaGTGTGCGCCCTCCCACGCA +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGITWPLP*CAPSHA
Trigger: TGCGTGGGAGGGCGCACATCAGGGCAGAGGCCAAGT...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGCCTCTGGCCGCAGCTTaGACACACGGGCAACTCGCT +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVPLAAA*THGQLA
Trigger: AGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGG...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGTGTGTGAGTGCTCGGTaGCACAGCCCGGTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLCVSAR*HSPVGR
Trigger: ACGGCCCACCGGGCTGTGGCACCGAGCACTCACACA...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGCTCAAGACAGGTTTCTaGCGGGCAGAGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWLKTGF*RAELPA
Trigger: GGCGGGCAGCTCTGCCCGGCAGAAACCTGTCTTGAG...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGCCGACGGCCGGAAGATaGGGTGTGGCCGGCAGACTA +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLPTAGR*GVAGRL
Trigger: TAGTCTGCCGGCCACACCGCATCTTCCGGCCGTCGG...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCAGGTAGTCAGGGTCTaGGTTCACCCGCCCGATGAT +
Preference number: 4 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPQVVRV*VHPPDD
Trigger: ATCATCGGGCGGGTGAACGCAGACCCTGACTACCTG...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGCCGGCCAGGTGCATaGGGAGGGTCTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWGRPGA*GGSPAS
Trigger: ACTGGCTGGAGACCCTCCGCATGCACCTGGCCGGCC...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGGCCGGCCAGGTGCATaGGGAGGGTCTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPGRPGA*GGSPAS
Trigger: ACTGGCTGGAGACCCTCCGCATGCACCTGGCCGGCC...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGTGCCTATCCTCTCACTaGCGGAGCCGGCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLCLSSH*RSRLLP
Trigger: GGGGAGGAGCCGGCTCCGGCAGTGAGAGGATAGGCA...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCCTGCAGGGGCTGAGCTaGTGGTGGACACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASLQGLS*WWTPAR
Trigger: CCGGGCAGGTGTCCACCAGCAGCTCAGCCCCTGCAG...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGTGCTCGAGGGTCAGCTaGAGCAGGCGGCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVCSRVS*SRRLVS
Trigger: GGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCA...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGAGCTCAGGGGGCTaGTCTCAGGCCCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPESSGG*SQAPAR
Trigger: ACGGGCTGGGGCCTGAGACCAGCCCCCTGAGCTCTC...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCCCGGAAGATGCGGTGTaGCCGGCAGACTACGCGGAG +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIPEDAV*PADYAE
Trigger: CTCCGCGTAGTCTGCCGGCCACACCGCATCTTCCGG...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGATTGAGGAACGTCCTCTaGGTCTCCTCGTCGAACCGG +
Preference number: 4 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGLRNVL*VSSSNR
Trigger: CCGGTTCGACGAGGAGACCCAGAGGACGTTCCTCAA...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGTCGGGGACCTCAGGGTaGGCAGGCAGTCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRSGTSG*AGSPLS
Trigger: CGAGAGCGGACTGCCTGCCCACCCTGAGGTCCCCGA...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGCAGCTGAGTGGCCCTaGCTCAGTCGGGGACCTCAG +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLAAEWP*LSRGPQ
Trigger: CTGAGGTCCCCGACTGAGCCAGGGCCACTCAGCTGC...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACACAGGGGCAGCTGAGTaGCCCTGGCTCAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDTGAAE*PWLSRG
Trigger: TCCCCGACTGAGCCAGGGCCACTCAGCTGCCCCTGT...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGAAGCGGTCCACGGGGTaGGAGAAGGCAAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVKRSTG*EKASQG
Trigger: GCCCTGACTTGCCTTCTCCCACCCCGTGGACCGCTT...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGCACCTCCCTAAGTCATaGTCCCACGGGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: PARAPQLHAPSRDPLHPEHLPKS*SHGPVG
Trigger: CCCAACAGGCCCGTGGGACCATGACTTAGGGAGGTG...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCACTCGCTTCCTGGAGCTaGGGCTGCCCTGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPLASWS*GCPAQG
Trigger: ACCCTGGGCAGGGCAGCCCCAGCTCCAGGAAGCGAG...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCAAGGGAGGGCAGGGGTaGCCAGACCAGCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIKGGQG*PDQLLP
Trigger: GGGAAGCAGCTGGTCTGGCCACCCCTGCCCTCCCTT...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS-3UTR TCA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACGGATGGACACCAGGGTaGCGGTGTGGGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHGWTPG*RCGAGG
Trigger: CCCACCTGCCCCACACCGTCACCCTGGTGTCCATCC...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GGTGTAGCGCTTCTTGCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGGCACCTCCCCGTGGATaGGGTCCGACGGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GVALLAVWLLEAPQALRLAPPRG*GPTAGR
Trigger: TCTTCCGGCCGTCGGACCTCATCCACGGGGAGGTGC...CAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGTCTTCTCGTCCACCATaGGACGCGCCAGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVSSRPP*DAPARS
Trigger: ACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGA...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCCGCAGGCCCTCAGGCTaGGTCTTCTCGTCCACCATG +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIRRPSG*VFSSTM
Trigger: CATGGTGGACGAGAAGACTCAGCCTGAGGGCCTGCG...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGTGCGGTCTGGCTTCTTaGGGCTCCGCAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWCGLAS*GSAGPQ
Trigger: CTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCA...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGCGCAACAGCGCACGGTaGTGGGGAAGAAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQRNSAR*WGRSSG
Trigger: CCCCGAGCTTCTTCCCCATCACCGTGCGCTGTTGCG...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGCGCAACAGCGCACGGTaGTGGGGAAGAAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWRNSAR*WGRSSG
Trigger: CCCCGAGCTTCTTCCCCATCACCGTGCGCTGTTGCG...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGAGTCAGGCAGGATCTaGTCGATGACGGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVESGRI*SMTGVT
Trigger: GGTGACCCCCGTCATCGAGCAGATCCTGCCTGACTC...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGTGTGTGAGTGCTCGGTaGCACAGCCCGGTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRCVSAR*HSPVGR
Trigger: ACGGCCCACCGGGCTGTGGCACCGAGCACTCACACA...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGTGTGTGAGTGCTCGGTaGCACAGCCCGGTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQCVSAR*HSPVGR
Trigger: ACGGCCCACCGGGCTGTGGCACCGAGCACTCACACA...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp CTCGCCGCGCCGGTAGGTCTCCCAGAAACCTCTGTCCAGCTGCTCCAGCTGTGGTGTGTGAGTGCTCGGTaGCACAGCCCGGTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LAAPVGLPETSVQLLQLWCVSAR*HSPVGR
Trigger: ACGGCCCACCGGGCTGTGGCACCGAGCACTCACACA...CCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGCCGACGGCCGGAAGATaGGGTGTGGCCGGCAGACTA +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRPTAGR*GVAGRL
Trigger: TAGTCTGCCGGCCACACCGCATCTTCCGGCCGTCGG...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGAGCGTGAACAGGGTTaGTGGGGCAGCGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWEREQG*WGSGVW
Trigger: CCACACGCCGCTGCCCCAGCAACCCTGTTCACGCTC...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGCATGGTTCGGAGGCTaGCTCCTGGCCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQAWFGG*LLAQPP
Trigger: TGGAGGCTGGGCCAGGAGGCAGCCTCCGAACCATGC...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGCCTCTGCCCTGATGTaGGCCCTCCCACGCACCCAA +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWASALM*ALPRTQ
Trigger: TTGGGTGCGTGGGAGGGCGCACATCAGGGCAGAGGC...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGCTGCTGGTGGACACCTaGCCGGTCCACTGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVLLVDT*PVHCAY
Trigger: ATAGGCACAGTGGACCGGGCAGGTGTCCACCAGCAG...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACTGCTCGAGGGTCAGCTaGAGCAGGCGGCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDCSRVS*SRRLVS
Trigger: GGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCA...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGTGCCCGCCTCCCCGCTaGGAGTATAAGCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWCPPPR*EYKPES
Trigger: GCTCTCCGGCTTATACTCCCAGCGGGGAGGCGGGCA...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTCCCAGGTCCTTGCGCTaGGAGGCCGGGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPPRSLR*EAGEPS
Trigger: ACTGGGCTCCCCGGCCTCCCAGCGCAAGGACCTGGG...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGCCGGAAGATGCGGTGTaGCCGGCAGACTACGCGGAG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWPEDAV*PADYAE
Trigger: CTCCGCGTAGTCTGCCGGCCACACCGCATCTTCCGG...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGGGGCCCAGTGGCAGGTaGCCGGCCAGGTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVGPSGR*PARCMR
Trigger: CCGCATGCACCTGGCCGGCCACCTGCCACTGGGCCC...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGGGGCCCAGTGGCAGGTaGCCGGCCAGGTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVGPSGR*PARCMR
Trigger: CCGCATGCACCTGGCCGGCCACCTGCCACTGGGCCC...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTTCGGGGACCTCAGGGTaGGCAGGCAGTCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSSGTSG*AGSPLS
Trigger: CGAGAGCGGACTGCCTGCCCACCCTGAGGTCCCCGA...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCACAGGGGCAGCTGAGTaGCCCTGGCTCAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASTGAAE*PWLSRG
Trigger: TCCCCGACTGAGCCAGGGCCACTCAGCTGCCCCTGT...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTCAGCTGGGCCGGCTCTaGGCCACGGCAGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSQLGRL*ATAERR
Trigger: CCTTCTCTCTGCCGTGGCCCAGAGCCGGCCCAGCTG...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACGGCAAAGTGACAAAATaGCCCTCCCACCCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDGKVTK*PSHPRP
Trigger: CGGGCGGGGGTGGGAGGGCCATTTTGTCACTTTGCC...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCGGACGTCACGGTTCCTaGATGGGGGTGGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASGRHGS*MGVGGS
Trigger: GGACCCACCCACCCCCATCCAGGAACCGTGACGTCC...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGCAGGATCTGCTCGATaGCGGGGGTCACCACAGTCT +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLAGSAR*RGSPQS
Trigger: AGACTGTGGTGACCCCCGTCATCGAGCAGATCCTGC...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGACGCTTGCCATGAGATaGGGCTGGGATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWTLAMR*GWDGHQ
Trigger: CTGGTGTCCATCCCAGCCTCATCTCATGGCAAGCGT...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGACGCTTGCCATGAGATaGGGCTGGGATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVTLAMR*GWDGHQ
Trigger: CTGGTGTCCATCCCAGCCTCATCTCATGGCAAGCGT...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGTGGCCCAGTGTATCGTaGGGGTCATGCTCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLWPSVS*GSCSRV
Trigger: GACCCTCGAGCATGACCCTCACGATACACTGGGCCA...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGGATGACTGCAGGGGCTaGGCTGCTGGTGGACACCTG +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRDDCRG*AAGGHL
Trigger: CAGGTGTCCACCAGCAGCTCAGCCCCTGCAGTCATC...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAAGGGGCTCTGAGATaGCTGCAGGGGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPEGALR*LQGLSC
Trigger: GCAGCTCAGCCCCTGCAGTCATCTCAGAGCCCCTTC...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGCCTCTGGCCGCAGCTTaGACACACGGGCAACTCGCT +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQPLAAA*THGQLA
Trigger: AGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGG...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGCTGAAGCAGTCTGCGTaGCAGTCCGCGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRLKQSA*QSAFRA
Trigger: GGCCCTGAACGCGGACTGGCACGCAGACTGCTTCAG...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCAGTAGTCCTTCTTaGAGAAGAGCTGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGPSSPS*RRAAHP
Trigger: AGGATGGGCAGCTCTTCTGCAAGAAGGACTACTGGG...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACCGGACGGTGTGTGAGTaGTCGGTGCCACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHRTVCE*SVPQPG
Trigger: ACCGGGCTGTGGCACCGAGCACTCACACACCGTCCG...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCCTCAAGACAGGTTTCTaGCGGGCAGAGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASLKTGF*RAELPA
Trigger: GGCGGGCAGCTCTGCCCGGCAGAAACCTGTCTTGAG...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCACTCAAGACAGGTTTCTaGCGGGCAGAGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPLKTGF*RAELPA
Trigger: GGCGGGCAGCTCTGCCCGGCAGAAACCTGTCTTGAG...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGAAACCTCTGTCCAGCTaGTCCAGCTGTGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVKPLSS*SSCGPS
Trigger: ACTGGGCCCACAGCTGGAGCAGCTGGACAGAGGTTT...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGAAACCTCTGTCCAGCTaGTCCAGCTGTGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVKPLSS*SSCGPS
Trigger: ACTGGGCCCACAGCTGGAGCAGCTGGACAGAGGTTT...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTGCCTCTGCCCTGATGTaGGCCCTCCCACGCACCCAA +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSASALM*ALPRTQ
Trigger: TTGGGTGCGTGGGAGGGCGCACATCAGGGCAGAGGC...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGCTGGAACTTGGCCTCTaGCCTGATGTGCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQLELGL*PDVRPP
Trigger: GGGAGGGCGCACATCAGGGCAGAGGCCAAGTTCCAG...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACGCGAAGACAGGTTTCTaGCGGGCAGAGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHAKTGF*RAELPA
Trigger: GGCGGGCAGCTCTGCCCGGCAGAAACCTGTCTTCGC...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGCTCAGGATTGGAGGCTaGAGAGGGTGGGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWLRIGG*RGWGQR
Trigger: ACGCTGGCCCCACCCTCTGCAGCCTCCAATCCTGAG...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS-3UTR GCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGTGGCCAGACCAGCTaGTTCCCCATCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWGGQTS*FPILPQ
Trigger: CTGAGGGAGGATGGGGAAGCAGCTGGTCTGGCCACC...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS-3UTR CCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCCCCGGATCCACTCCCTaGACGCGGACGGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTPGSTP*TRTVCE
Trigger: CTCACACACCGTCCGCGTCCAGGGAGTGGATCCGGG...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGTGTAGCGCTTCTTGCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGTGCCCGCCTCCCCGCTaGGAGTATAAGCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GVALLAVWLLEAPQALRLCPPPR*EYKPES
Trigger: GCTCTCCGGCTTATACTCCCAGCGGGGAGGCGGGCA...CAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGCCCAGCACCTCCCCGTaGATGAGGTCCGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVPSTSP*MRSDGR
Trigger: CCGGCCGTCGGACCTCATCCACGGGGAGGTGCTGGG...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CAGGGTGGGCAGGCAGTCCGCTCTCGCCGCGCCGGTAGGTCTCCCAGAAACCTCTTGAGGAACGTCCTCTaGGTCTCCTCGTCGAACCGG +
Preference number: 4 (lower is better)
Translates to: QGGQAVRSRRAGRSPRNLLRNVL*VSSSNR
Trigger: CCGGTTCGACGAGGAGACCCAGAGGACGTTCCTCAA...GAGGTTTCTGGGAGACCTACCGGCGCGGCGAGAGCGGACTGCCTGCCCACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCCGGACCAGGCAGTTGTaGGAGTTGAGGTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIRTRQL*ELRSRW
Trigger: CCACCGAGACCTCAACTCCCACAACTGCCTGGTCCG...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGATATGGACCAGACAGGTaGAGCGTGAACAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGYGPDR*SVNRVA
Trigger: AGCAACCCTGTTCACGCTCCACCTGTCTGGTCCATA...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACGCCTCCAGGGAGCTATaGACCAGACAGGTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDASREL*TRQVER
Trigger: ACGCTCCACCTGTCTGGTCCATAGCTCCCTGGAGGC...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCGTCACGGTTCCTGGATaGGGGTGGGTGGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTVTVPG*GWVGPT
Trigger: GGTGGGACCCACCCACCCCCATCCAGGAACCGTGAC...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGTGCAGTCACAACACCTaGAGCAGTCTGCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWCSHNT*SSLRAS
Trigger: ACTGGCACGCAGACTGCTTCAGGTGTTGTGACTGCA...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGAGTCCACGCTTGCCATaGGATGAGGCTGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLSPRLP*DEAGMD
Trigger: GTCCATCCCAGCCTCATCTCATGGCAAGCGTGGACT...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTCAATGGAGACTaGAAGTCCACGCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVGVNGD*KSTLAM
Trigger: CATGGCAAGCGTGGACTTTCAGTCTCCATTGACCCC...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGGACGCGGACGGTGTGTaGGTGCTCGGTGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVDADGV*VLGATA
Trigger: GGCTGTGGCACCGAGCACTCACACACCGTCCGCGTC...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGAGGCGGCTGGTTTCCTaGATCAGCAGGTCAATCTCG +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVRRLVS*ISRSIS
Trigger: CGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCT...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTCGCAGGCCCTCAGGCTaGGTCTTCTCGTCCACCATG +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSRRPSG*VFSSTM
Trigger: CATGGTGGACGAGAAGACTCAGCCTGAGGGCCTGCG...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCCATAGCTGCGGCCGTTaGTCATCTCAGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIHSCGR*SSQVPS
Trigger: GGATGGCACCTGAGATGATCAACGGCCGCAGCTATG...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACGGAATCCTCGCACGTTaGGGCCAAAGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDGILAR*GQSPWC
Trigger: GCACCATGGACTTTGGCCTCAACGTGCGAGGATTCC...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCGGACCCCCTTCACCCTaGGGCTTGGTACCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASGPPSP*GLVPAS
Trigger: AGAAGCAGGTACCAAGCCTCAGGGTGAAGGGGGTCC...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp TGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCGAAGGGGCTCTGAGATaGCTGCAGGGGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CALPRTQALYGAWFGGCLEGALR*LQGLSC
Trigger: GCAGCTCAGCCCCTGCAGTCATCTCAGAGCCCCTTC...GAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGAGCACGGGTTTGGGCTaGGTCAAGCGTCCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWSTGLG*VKRPKE
Trigger: TTCCTTTGGACGCTTGACTCAGCCCAAACCCGTGCT...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR GCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTCTGAAGCAGTCTGCGTaGCAGTCCGCGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSLKQSA*QSAFRA
Trigger: GGCCCTGAACGCGGACTGGCACGCAGACTGCTTCAG...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACACACCTGAAGCAGTCTaGGTGCCAGTCCGCGTTCAG +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDTPEAV*VPVRVQ
Trigger: CTGAACGCGGACTGGCACGCAGACTGCTTCAGGTGT...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGAGTCAGGCAGGATCTaGTCGATGACGGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWESGRI*SMTGVT
Trigger: GGTGACCCCCGTCATCGAGCAGATCCTGCCTGACTC...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTCGGACGGTGTGTGAGTaGTCGGTGCCACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPRTVCE*SVPQPG
Trigger: ACCGGGCTGTGGCACCGAGCACTCACACACCGTCCG...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGCAGGTAGTCAGGGTCTaGGTTCACCCGCCCGATGAT +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLQVVRV*VHPPDD
Trigger: ATCATCGGGCGGGTGAACGCAGACCCTGACTACCTG...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTGCATGGTTCGGAGGCTaGCTCCTGGCCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPAWFGG*LLAQPP
Trigger: TGGAGGCTGGGCCAGGAGGCAGCCTCCGAACCATGC...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp TGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCTGGAACTTGGCCTCTaGCCTGATGTGCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CALPRTQALYGAWFGGCLLELGL*PDVRPP
Trigger: GGGAGGGCGCACATCAGGGCAGAGGCCAAGTTCCAG...GAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGTCCACGTCATCCCTCTaGCCAGGAAGCAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQSTSSL*PGSSDR
Trigger: CCGGTCACTGCTTCCTGGGCAGAGGGATGACGTGGA...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGATGAAACACTCGGGGTaGTACTTCAGCTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWMKHSG*YFSSPA
Trigger: GGCTGGGGAGCTGAAGTACCACCCCGAGTGTTTCAT...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGATGAAACACTCGGGGTaGTACTTCAGCTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVMKHSG*YFSSPA
Trigger: GGCTGGGGAGCTGAAGTACCACCCCGAGTGTTTCAT...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGGGTCTCCGACGTGGATaGAATTCTTCACATCTGGGC +
Preference number: 4 (lower is better)
Translates to: PARAPQLHAPSRDPLHPEGLRRG*NSSHLG
Trigger: GCCCAGATGTGAAGAATTCCATCCACGTCGGAGACC...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTTGAGGAACGTCCTCTaGGTCTCCTCGTCGAACCGG +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGILRNVL*VSSSNR
Trigger: CCGGTTCGACGAGGAGACCCAGAGGACGTTCCTCAA...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGCACTCTCTGGCTCCATaGGTACTGGCTGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVHSLAP*VLAVHA
Trigger: AGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTG...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGCAAAGCTCACTCTCTaGCTCCATGGGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVAKLTL*LHGYWL
Trigger: CAGCCAGTACCCATGGAGCCAGAGAGTGAGCTTTGC...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGCAAAGCTCACTCTCTaGCTCCATGGGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWAKLTL*LHGYWL
Trigger: CAGCCAGTACCCATGGAGCCAGAGAGTGAGCTTTGC...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGCGCTTCTTGCGGTCTaGCTTCTTGAGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWALLAV*LLEAPQ
Trigger: CTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGC...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGGCGCTTCTTGCGGTCTaGCTTCTTGAGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRALLAV*LLEAPQ
Trigger: CTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGC...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGCGCGGAGGAATCTGGTaGGGGTGGATTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWRGGIW*GWILQR
Trigger: CCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCG...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGTCCCGCGGAGGAATCTaGTGGGGGTGGATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRSRGGI*WGWILQ
Trigger: CTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGA...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCACGTGAACAGGGTTGCTaGGGCAGCGGCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPREQGC*GSGVWK
Trigger: TTTCCACACGCCGCTGCCCCAGCAACCCTGTTCACG...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGGCCTCCAGGGAGCTATaGACCAGACAGGTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRASREL*TRQVER
Trigger: ACGCTCCACCTGTCTGGTCCATAGCTCCCTGGAGGC...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCGGCAAAGTGACAAAATaGCCCTCCCACCCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTGKVTK*PSHPRP
Trigger: CGGGCGGGGGTGGGAGGGCCATTTTGTCACTTTGCC...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGCACCTCCCTAAGTCATaGTCCCACGGGCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQHLPKS*SHGPVG
Trigger: CCCAACAGGCCCGTGGGACCATGACTTAGGGAGGTG...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCGAGGGAGCACGGGTTTaGGCTGAGTCAAGCGTCCAA +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIEGARV*AESSVQ
Trigger: TTGGACGCTTGACTCAGCCCAAACCCGTGCTCCCTC...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGCTACACTGGGGGCTCTaGAGGTCTAAGGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWLHWGL*RSKGGQ
Trigger: CTGCCCTCCCTTAGACCTCCAGAGCCCCCAGTGTAG...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS-3UTR CCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGCAACAGCATCCTCTGTaGCTACACTGGGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLQQHPL*LHWGLW
Trigger: CCAGAGCCCCCAGTGTAGCCACAGAGGATGCTGTTG...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS-3UTR TCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCGCAGGATCTGCTCGATaGCGGGGGTCACCACAGTCT +
Preference number: 4 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTAGSAR*RGSPQS
Trigger: AGACTGTGGTGACCCCCGTCATCGAGCAGATCCTGC...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCGGGGTCAATGGAGACTaGAAGTCCACGCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIGVNGD*KSTLAM
Trigger: CATGGCAAGCGTGGACTTTCAGTCTCCATTGACCCC...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACTCTTCTCGTCCACCATaGGACGCGCCAGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHSSRPP*DAPARS
Trigger: ACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGA...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCACATAGCTGCGGCCGTTaGTCATCTCAGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPHSCGR*SSQVPS
Trigger: GGATGGCACCTGAGATGATCAACGGCCGCAGCTATG...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGGAATCCTCGCACGTTaGGGCCAAAGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQGILAR*GQSPWC
Trigger: GCACCATGGACTTTGGCCTCAACGTGCGAGGATTCC...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGACTTGGCCTCTGCCCTaGTGTGCGCCCTCCCACGCA +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVTWPLP*CAPSHA
Trigger: TGCGTGGGAGGGCGCACATCAGGGCAGAGGCCAAGT...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTGGACCCCCTTCACCCTaGGGCTTGGTACCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSGPPSP*GLVPAS
Trigger: AGAAGCAGGTACCAAGCCTCAGGGTGAAGGGGGTCC...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp CTGATGTGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCGATGACTGCAGGGGCTaGGCTGCTGGTGGACACCTG +
Preference number: 4 (lower is better)
Translates to: LMCALPRTQALYGAWFGGDDCRG*AAGGHL
Trigger: CAGGTGTCCACCAGCAGCTCAGCCCCTGCAGTCATC...GCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGCGTCTTCTTGGGGCTaGAGCCAACAGCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWASSWG*SQQHPL
Trigger: CAGAGGATGCTGTTGGCTTCAGCCCCAAGAAGACGC...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS-3UTR GCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGCCCAGTAGTCCTTCTTaGAGAAGAGCTGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVPSSPS*RRAAHP
Trigger: AGGATGGGCAGCTCTTCTGCAAGAAGGACTACTGGG...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGAGTCCCTTGGTGATTTaGTCAGAGCACCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVSPLVI*SEHPWQ
Trigger: CTGCCATGGGTGCTCTGAGCAAATCACCAAGGGACT...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGCTGAAAGTCCACGCTTaGCATGAGATGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVLKVHA*HEMRLG
Trigger: TCCCAGCCTCATCTCATGGCAAGCGTGGACTTTCAG...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGCGGACGGTGTGTGAGTaGTCGGTGCCACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVRTVCE*SVPQPG
Trigger: ACCGGGCTGTGGCACCGAGCACTCACACACCGTCCG...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGTCACATCTGGGCTCATaGAGCCCGGATCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWSHLGS*SPDPLP
Trigger: AGGGAGTGGATCCGGGCTGCATGAGCCCAGATGTGA...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGCCGGAGACCTGTCGATaGTGCAGCTCCTCAAGACAG +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQPETCR*CSSSRQ
Trigger: CTGTCTTGAGGAGCTGCAGCATCGACAGGTCTCCGG...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCAAACCTCTGTCCAGCTaGTCCAGCTGTGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASKPLSS*SSCGPS
Trigger: ACTGGGCCCACAGCTGGAGCAGCTGGACAGAGGTTT...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTCTGCCCGGTCCACTGTaGCTATCCTCTCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPLPGPL*LSSHCR
Trigger: CCGGCAGTGAGAGGATAGGCACAGTGGACCGGGCAG...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGGATGGTGGAACGCCCTaGCTAGATGTGGACAATTCT +
Preference number: 4 (lower is better)
Translates to: PARAPQLHAPSRDPLHPEDGGTP*LDVDNS
Trigger: AGAATTGTCCACATCTAGGCAGGGCGTTCCACCATC...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGGAATTCTTCACATCTaGGCTCATGCAGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVGILHI*AHAARI
Trigger: GATCCGGGCTGCATGAGCCCAGATGTGAAGAATTCC...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCATCCGGTCTCCGACGTaGATGGAATTCTTCACATCT +
Preference number: 4 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPIRSPT*MEFFTS
Trigger: AGATGTGAAGAATTCCATCCACGTCGGAGACCGGAT...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGCTGGAGCAGGCGGCTaGTTTCCTGAATCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPAGAGG*FPESAG
Trigger: ACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGC...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTTGCTCGAGGGTCAGCTaGAGCAGGCGGCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPCSRVS*SRRLVS
Trigger: GGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCA...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp ATGATGCCCCGGAGCGTGCCGCCCTTGATGTACTCAGTGATGAAGTTGAGCCTCCCCAGCACCTCCCCGTaGATGAGGTCCGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: MMPRSVPPLMYSVMKLSLPSTSP*MRSDGR
Trigger: CCGGCCGTCGGACCTCATCCACGGGGAGGTGCTGGG...GAGGCTCAACTTCATCACTGAGTACATCAAGGGCGGCACGCTCCGGGGCATCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCGCAAAGCTCACTCTCTaGCTCCATGGGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIAKLTL*LHGYWL
Trigger: CAGCCAGTACCCATGGAGCCAGAGAGTGAGCTTTGC...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGCTGATGCGATGTCCTTaGCAAAGCTCACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVLMRCP*QSSLSG
Trigger: GCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAG...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GGTGTAGCGCTTCTTGCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGGCGCTTCTTGCGGTCTaGCTTCTTGAGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GVALLAVWLLEAPQALRLALLAV*LLEAPQ
Trigger: CTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGC...CAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGTGGATTCTCCAGAGGTaGGGACAGGGGCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQWILQR*GQGQLS
Trigger: ACTCAGCTGCCCCTGTCCCCACCTCTGGAGAATCCA...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGAATCTGGTGGGGGTaGATTCTCCAGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWGIWWG*ILQRWG
Trigger: TCCCCACCTCTGGAGAATCCACCCCCACCAGATTCC...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp TGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCGCGGAGGAATCTGGTaGGGGTGGATTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CALPRTQALYGAWFGGCLRGGIW*GWILQR
Trigger: CCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCG...GAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGTATGGACCAGACAGGTaGAGCGTGAACAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVYGPDR*SVNRVA
Trigger: AGCAACCCTGTTCACGCTCCACCTGTCTGGTCCATA...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGGGGAACACAGACACCTaGAACTTGGCCTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRGNTDT*NLASAL
Trigger: CAGGGCAGAGGCCAAGTTCCAGGTGTCTGTGTTCCC...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGCCCAGACTCCCCATTTaGTTCCTGGGAACACAGACA +
Preference number: 4 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWPRLPI*FLGTQT
Trigger: TGTCTGTGTTCCCAGGAACCAAATGGGGAGTCTGGG...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGGGGCTGAGCTGCTGGTaGACACCTGCCCGGTCCACT +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVGLSCW*TPARST
Trigger: AGTGGACCGGGCAGGTGTCCACCAGCAGCTCAGCCC...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGCTGGGTTTGGTTCCTTaGACGTCACGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVLGLVP*TSRFLD
Trigger: ATCCAGGAACCGTGACGTCCAAGGAACCAAACCCAG...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACAGTCCACGCTTGCCATaGGATGAGGCTGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHSPRLP*DEAGMD
Trigger: GTCCATCCCAGCCTCATCTCATGGCAAGCGTGGACT...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGGATGGGCGTGCCATTaGTTTCCAAGATCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQGWACH*FPRSGL
Trigger: GAGACCGGATCTTGGAAATCAATGGCACGCCCATCC...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGAGGCGGCTGGTTTCCTaGATCAGCAGGTCAATCTCG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWRRLVS*ISRSIS
Trigger: CGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCT...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR TCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCCATAGCTGCGGCCGTTaGTCATCTCAGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTHSCGR*SSQVPS
Trigger: GGATGGCACCTGAGATGATCAACGGCCGCAGCTATG...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CCGGCCAGGTGCATGCGGAGGGTCTCCAGCCAGTGTTCCAGCTTCACAAAGGATCTGAAGCAGTCTGCGTaGCAGTCCGCGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PARCMRRVSSQCSSFTKDLKQSA*QSAFRA
Trigger: GGCCCTGAACGCGGACTGGCACGCAGACTGCTTCAG...ATCCTTTGTGAAGCTGGAACACTGGCTGGAGACCCTCCGCATGCACCTGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACCCCAGTAGTCCTTCTTaGAGAAGAGCTGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDPSSPS*RRAAHP
Trigger: AGGATGGGCAGCTCTTCTGCAAGAAGGACTACTGGG...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGAGACCTGTCGATGCTaGAGCTCCTCAAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLETCRC*SSSRQV
Trigger: AACCTGTCTTGAGGAGCTGCAGCATCGACAGGTCTC...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCGAGACCTGTCGATGCTaGAGCTCCTCAAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIETCRC*SSSRQV
Trigger: AACCTGTCTTGAGGAGCTGCAGCATCGACAGGTCTC...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGTCCTCGATACCTGTTaGTACCTAGACACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQVLDTC*YLDTPW
Trigger: CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGAC...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACGATCAGCCCTCTCTCTaGTTTGGGGGTTTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDDQPSL*FGGLES
Trigger: ACTCTCCAAACCCCCAAAGCAGAGAGAGGGCTGATC...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGCTGAGGCTTGGTACCTaGTTCTCACTAAAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PARAPQLHAPSRDPLHPELRLGT*FSLKWL
Trigger: AAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAG...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGCTGCCCGGTCCACTGTaGCTATCCTCTCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVLPGPL*LSSHCR
Trigger: CCGGCAGTGAGAGGATAGGCACAGTGGACCGGGCAG...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGCTGCAGGGGCTGAGCTaGTGGTGGACACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRLQGLS*WWTPAR
Trigger: CCGGGCAGGTGTCCACCAGCAGCTCAGCCCCTGCAG...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGGTCTCCGACGTGGATaGAATTCTTCACATCTGGGC +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLGLRRG*NSSHLG
Trigger: GCCCAGATGTGAAGAATTCCATCCACGTCGGAGACC...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTGCTGGAGCAGGCGGCTaGTTTCCTGAATCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSAGAGG*FPESAG
Trigger: ACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGC...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGTGGCTCCATGGGTACTaGCTGTCCATGCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLWLHGY*LSMLLM
Trigger: CATCAAGAGCATGGACAGCCAGTACCCATGGAGCCA...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGCTCCATGGGTACTaGCTGTCCATGCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIWLHGY*LSMLLM
Trigger: CATCAAGAGCATGGACAGCCAGTACCCATGGAGCCA...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCACACTCTCTGGCTCCATaGGTACTGGCTGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPHSLAP*VLAVHA
Trigger: AGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTG...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CTGATGTGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCCGCGGAGGAATCTGGTaGGGGTGGATTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LMCALPRTQALYGAWFGGRGGIW*GWILQR
Trigger: CCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCG...GCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTCGTGAACAGGGTTGCTaGGGCAGCGGCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPREQGC*GSGVWK
Trigger: TTTCCACACGCCGCTGCCCCAGCAACCCTGTTCACG...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGCACCCAAGCGTTATATaGGGCATGGTTCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LRATSRGGIWWGWILQRWHPSVI*GMVRRL
Trigger: CAGCCTCCGAACCATGCCCCATATAACGCTTGGGTG...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGCTTCACCCTGAGGCTTaGTACCTGCTTCTCACTAAA +
Preference number: 4 (lower is better)
Translates to: PARAPQLHAPSRDPLHPELHPEA*YLLLTK
Trigger: TTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAG...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGCTAGAATGCTGGACATaGGCAGGAAGCAACCCTGTC +
Preference number: 4 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLLECWT*AGSNPV
Trigger: GACAGGGTTGCTTCCTGCCCATGTCCAGCATTCTAG...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CCA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCAGCGTCCAAAGGAATTaGGTGGTCCAGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: EKPGSPLSQLRATSRGGISVQRN*VVQSST
Trigger: AGTGCTGGACTGGACCACCCAATTCCTTTGGACGCT...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACCAACACTTAGCCCTCTaGAGGAAGCGGCGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDQHLAL*RKRRLL
Trigger: AAGAAGACGCCGCTTCCTCCAGAGGGCTAAGTGTTG...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS-3UTR TCA 90 bp TGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCTGCAGTCACAACACCTaGAGCAGTCTGCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CALPRTQALYGAWFGGCLCSHNT*SSLRAS
Trigger: ACTGGCACGCAGACTGCTTCAGGTGTTGTGACTGCA...GAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTACGCTTGCCATGAGATaGGGCTGGGATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPTLAMR*GWDGHQ
Trigger: CTGGTGTCCATCCCAGCCTCATCTCATGGCAAGCGT...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCGGGGTCAATGGAGACTaGAAGTCCACGCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTGVNGD*KSTLAM
Trigger: CATGGCAAGCGTGGACTTTCAGTCTCCATTGACCCC...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACGACGCGGACGGTGTGTaGGTGCTCGGTGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNDADGV*VLGATA
Trigger: GGCTGTGGCACCGAGCACTCACACACCGTCCGCGTC...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GGTGTAGCGCTTCTTGCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGGGATGGGCGTGCCATTaGTTTCCAAGATCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: GVALLAVWLLEAPQALRLGWACH*FPRSGL
Trigger: GAGACCGGATCTTGGAAATCAATGGCACGCCCATCC...CAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTCTTCTCGTCCACCATaGGACGCGCCAGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVSSRPP*DAPARS
Trigger: ACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGA...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GCCATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACTGCGGTCTGGCTTCTTaGGGCTCCGCAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AIPDAMSLAKLTLWLHGYCGLAS*GSAGPQ
Trigger: CTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCA...GTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCAGTCCCTTGGTGATTTaGTCAGAGCACCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASSPLVI*SEHPWQ
Trigger: CTGCCATGGGTGCTCTGAGCAAATCACCAAGGGACT...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCCTGAAAGTCCACGCTTaGCATGAGATGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASLKVHA*HEMRLG
Trigger: TCCCAGCCTCATCTCATGGCAAGCGTGGACTTTCAG...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGCTGAAAGTCCACGCTTaGCATGAGATGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQLKVHA*HEMRLG
Trigger: TCCCAGCCTCATCTCATGGCAAGCGTGGACTTTCAG...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR GCA 90 bp CTGATGTGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTCACATCTGGGCTCATaGAGCCCGGATCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: LMCALPRTQALYGAWFGGSHLGS*SPDPLP
Trigger: AGGGAGTGGATCCGGGCTGCATGAGCCCAGATGTGA...GCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CTGATGTGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCCCGGAGACCTGTCGATaGTGCAGCTCCTCAAGACAG +
Preference number: 4 (lower is better)
Translates to: LMCALPRTQALYGAWFGGPETCR*CSSSRQ
Trigger: CTGTCTTGAGGAGCTGCAGCATCGACAGGTCTCCGG...GCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACGGCCGGCCAGGTGCATaGGGAGGGTCTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNGRPGA*GGSPAS
Trigger: ACTGGCTGGAGACCCTCCGCATGCACCTGGCCGGCC...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp CGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCACGGTGTGTCAAGGTGGCCGGCCAGGTaGATGCGGAGGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTGSAPSSPSPHLSHGVSRWPAR*MRRVSS
Trigger: GCTGGAGACCCTCCGCATGCACCTGGCCGGCCACCT...TGACACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTAGGCCCTCCAGCTCATaGAAGGAGAAGCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPRPSSS*KEKQEG
Trigger: CCCCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCT...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGTGGACAATTCTAGAATaGTGGACATGGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVWTILE*WTWAGS
Trigger: GCTTCCTGCCCATGTCCAGCATTCTAGAATTGTCCA...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CCA 90 bp GGTGTAGCGCTTCTTGCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGATGAAACACTCGGGGTaGTACTTCAGCTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GVALLAVWLLEAPQALRLMKHSG*YFSSPA
Trigger: GGCTGGGGAGCTGAAGTACCACCCCGAGTGTTTCAT...CAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGCCCGGATCCACTCCCTaGACGCGGACGGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWPGSTP*TRTVCE
Trigger: CTCACACACCGTCCGCGTCCAGGGAGTGGATCCGGG...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CTGATGTGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCGCTGGAGCAGGCGGCTaGTTTCCTGAATCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LMCALPRTQALYGAWFGGAGAGG*FPESAG
Trigger: ACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGC...GCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCACATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACGAGAGCTCAGGGGGCTaGTCTCAGGCCCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNESSGG*SQAPAR
Trigger: ACGGGCTGGGGCCTGAGACCAGCCCCCTGAGCTCTC...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTTTGAGGAACGTCCTCTaGGTCTCCTCGTCGAACCGG +
Preference number: 4 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPLRNVL*VSSSNR
Trigger: CCGGTTCGACGAGGAGACCCAGAGGACGTTCCTCAA...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGCGGACCAGGCAGTTGTaGGAGTTGAGGTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVRTRQL*ELRSRW
Trigger: CCACCGAGACCTCAACTCCCACAACTGCCTGGTCCG...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGGCAGCTGAGTGGCCCTaGCTCAGTCGGGGACCTCAG +
Preference number: 4 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRAAEWP*LSRGPQ
Trigger: CTGAGGTCCCCGACTGAGCCAGGGCCACTCAGCTGC...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACTCCCCATTTGGTTCCTaGGAACACAGACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDSPFGS*EHRHLE
Trigger: TTCCAGGTGTCTGTGTTCCCAGGAACCAAATGGGGA...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGGGGCTGAGCTGCTGGTaGACACCTGCCCGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWGLSCW*TPARST
Trigger: AGTGGACCGGGCAGGTGTCCACCAGCAGCTCAGCCC...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGTTCTGCGTCTGGGTTTaGTTCCTTGGACGTCACGGT +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRFCVWV*FLGRHG
Trigger: ACCGTGACGTCCAAGGAACCAAACCCAGACGCAGAA...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGGATGGACACCAGGGTaGCGGTGTGGGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLGWTPG*RCGAGG
Trigger: CCCACCTGCCCCACACCGTCACCCTGGTGTCCATCC...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGAGCTGCTGCAGCCGTATaGAAAAATAATACAAACTCT +
Preference number: 4 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGAAAAV*KNNTNS
Trigger: AGAGTTTGTATTATTTTTTCATACGGCTGCAGCAGC...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGGGTCCAGTCCAGCACTaGTGGTGGAACGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRGPVQH*WWNALP
Trigger: AGGCAGGGCGTTCCACCATCAGTGCTGGACTGGACC...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR GCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTGAGACCTGTCGATGCTaGAGCTCCTCAAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSETCRC*SSSRQV
Trigger: AACCTGTCTTGAGGAGCTGCAGCATCGACAGGTCTC...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACCCGACGGCCGGAAGATaGGGTGTGGCCGGCAGACTA +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNPTAGR*GVAGRL
Trigger: TAGTCTGCCGGCCACACCGCATCTTCCGGCCGTCGG...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp CCGGCCAGGTGCATGCGGAGGGTCTCCAGCCAGTGTTCCAGCTTCACAAAGGATAAACCTCTGTCCAGCTaGTCCAGCTGTGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PARCMRRVSSQCSSFTKDKPLSS*SSCGPS
Trigger: ACTGGGCCCACAGCTGGAGCAGCTGGACAGAGGTTT...ATCCTTTGTGAAGCTGGAACACTGGCTGGAGACCCTCCGCATGCACCTGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGAGGCCCTCCAGCTCATaGAAGGAGAAGCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVRPSSS*KEKQEG
Trigger: CCCCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCT...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp TGCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCGATCAGCCCTCTCTCTaGTTTGGGGGTTTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: CALPRTQALYGAWFGGCLDQPSL*FGGLES
Trigger: ACTCTCCAAACCCCCAAAGCAGAGAGAGGGCTGATC...GAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACCCCGGATCCACTCCCTaGACGCGGACGGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNPGSTP*TRTVCE
Trigger: CTCACACACCGTCCGCGTCCAGGGAGTGGATCCGGG...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTGGAATTCTTCACATCTaGGCTCATGCAGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSGILHI*AHAARI
Trigger: GATCCGGGCTGCATGAGCCCAGATGTGAAGAATTCC...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACGGAATTCTTCACATCTaGGCTCATGCAGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHGILHI*AHAARI
Trigger: GATCCGGGCTGCATGAGCCCAGATGTGAAGAATTCC...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GCCATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACTGCTCGAGGGTCAGCTaGAGCAGGCGGCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AIPDAMSLAKLTLWLHGYCSRVS*SRRLVS
Trigger: GGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCA...GTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTGGCTCCATGGGTACTaGCTGTCCATGCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTWLHGY*LSMLLM
Trigger: CATCAAGAGCATGGACAGCCAGTACCCATGGAGCCA...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTATCGGGGACCTCAGGGTaGGCAGGCAGTCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLSGTSG*AGSPLS
Trigger: CGAGAGCGGACTGCCTGCCCACCCTGAGGTCCCCGA...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGGGAATCTGGTGGGGGTaGATTCTCCAGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVGIWWG*ILQRWG
Trigger: TCCCCACCTCTGGAGAATCCACCCCCACCAGATTCC...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGGCGTTATATGGGGCATaGTTCGGAGGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVALYGA*FGGCLL
Trigger: CAGGAGGCAGCCTCCGAACCATGCCCCATATAACGC...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGGCGTTATATGGGGCATaGTTCGGAGGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVALYGA*FGGCLL
Trigger: CAGGAGGCAGCCTCCGAACCATGCCCCATATAACGC...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTTTCTGCGTCTGGGTTTaGTTCCTTGGACGTCACGGT +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSFCVWV*FLGRHG
Trigger: ACCGTGACGTCCAAGGAACCAAACCCAGACGCAGAA...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCTCCAAAGGAATTGGGTaGTCCAGTCCAGCACTGATG +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASSKGIG*SSPALM
Trigger: CATCAGTGCTGGACTGGACCACCCAATTCCTTTGGA...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
3UTR CAA 72 bp GGACCTCCGCCCCATGGGATCAGCCCTCTCTCTGCTTaGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: GPPPHGISPLSA*GVWRVLDTCCY
Trigger: GTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCTGATCCCATGGGGCGGAGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGTGGCCCAGTGTATCGTaGGGGTCATGCTCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWWPSVS*GSCSRV
Trigger: GACCCTCGAGCATGACCCTCACGATACACTGGGCCA...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp ATGATGCCCCGGAGCGTGCCGCCCTTGATGTACTCAGTGATGAAGTTGAGCCTCTGGCCCAGTGTATCGTaGGGGTCATGCTCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: MMPRSVPPLMYSVMKLSLWPSVS*GSCSRV
Trigger: GACCCTCGAGCATGACCCTCACGATACACTGGGCCA...GAGGCTCAACTTCATCACTGAGTACATCAAGGGCGGCACGCTCCGGGGCATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACGTTCTTCCCTCCAGGTaGAACAAAGTAGCGTCAACC +
Preference number: 4 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHVLPSR*NKVAST
Trigger: GGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAAC...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACCCTCTGGCCGCAGCTTaGACACACGGGCAACTCGCT +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNPLAAA*THGQLA
Trigger: AGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGG...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGCTGAGGCTTGGTACCTaGTTCTCACTAAAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRLRLGT*FSLKWL
Trigger: AAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAG...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGCTGCTGGTGGACACCTaGCCGGTCCACTGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRLLVDT*PVHCAY
Trigger: ATAGGCACAGTGGACCGGGCAGGTGTCCACCAGCAG...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGGCCCGCAGTACAGCTTaGAGTGCTCCACCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWARSTA*SAPPAC
Trigger: ACACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGC...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAATCCGGTCTCCGACGTaGATGGAATTCTTCACATCT +
Preference number: 4 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPIRSPT*MEFFTS
Trigger: AGATGTGAAGAATTCCATCCACGTCGGAGACCGGAT...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGCACTCTCTGGCTCCATaGGTACTGGCTGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVHSLAP*VLAVHA
Trigger: AGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTG...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAACACATCCACCTTCTCATCATAGCTGCGGCCGTTGATCATCTCAGGTGCCATTCGGGGACCTCAGGGTaGGCAGGCAGTCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EHIHLLIIAAAVDHLRCHSGTSG*AGSPLS
Trigger: CGAGAGCGGACTGCCTGCCCACCCTGAGGTCCCCGA...ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGTCCCGCGGAGGAATCTaGTGGGGGTGGATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRSRGGI*WGWILQ
Trigger: CTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGA...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GGCTGTTTGCTCAGCCACTGGGGACCTCCGCCCCATGGGATCAGCCCTCTCTCTTCCCCATTTGGTTCCTaGGAACACAGACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: GCLLSHWGPPPHGISPLSSPFGS*EHRHLE
Trigger: TTCCAGGTGTCTGTGTTCCCAGGAACCAAATGGGGA...AGAGAGAGGGCTGATCCCATGGGGCGGAGGTCCCCAGTGGCTGAGCAAACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGGACGTCACGGTTCCTaGATGGGGGTGGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLGRHGS*MGVGGS
Trigger: GGACCCACCCACCCCCATCCAGGAACCGTGACGTCC...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GCCATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACACGCTTGCCATGAGATaGGGCTGGGATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: AIPDAMSLAKLTLWLHGYTLAMR*GWDGHQ
Trigger: CTGGTGTCCATCCCAGCCTCATCTCATGGCAAGCGT...GTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGAGTCCACGCTTGCCATaGGATGAGGCTGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWSPRLP*DEAGMD
Trigger: GTCCATCCCAGCCTCATCTCATGGCAAGCGTGGACT...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCACGGTGTGTCAGAGTCAGGCAGGATCTaGTCGATGACGGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: RTGSAPSSPSPHLSHGVSESGRI*SMTGVT
Trigger: GGTGACCCCCGTCATCGAGCAGATCCTGCCTGACTC...TGACACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp GCCATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACTCACATCTGGGCTCATaGAGCCCGGATCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: AIPDAMSLAKLTLWLHGYSHLGS*SPDPLP
Trigger: AGGGAGTGGATCCGGGCTGCATGAGCCCAGATGTGA...GTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGCCGGAGACCTGTCGATaGTGCAGCTCCTCAAGACAG +
Preference number: 4 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRPETCR*CSSSRQ
Trigger: CTGTCTTGAGGAGCTGCAGCATCGACAGGTCTCCGG...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAAGCATGGTGTGTGTGTaGAGCTGGGCCGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLSMVCV*SWAGSG
Trigger: CCCAGAGCCGGCCCAGCTGCACACACACACCATGCT...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAACACATCCACCTTCTCATCATAGCTGCGGCCGTTGATCATCTCAGGTGCCATCCGGAAGATGCGGTGTaGCCGGCAGACTACGCGGAG +
Preference number: 4 (lower is better)
Translates to: EHIHLLIIAAAVDHLRCHPEDAV*PADYAE
Trigger: CTCCGCGTAGTCTGCCGGCCACACCGCATCTTCCGG...ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGCTGATGCGATGTCCTTaGCAAAGCTCACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVLMRCP*QSSLSG
Trigger: GCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAG...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGTGGATTCTCCAGAGGTaGGGACAGGGGCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRWILQR*GQGQLS
Trigger: ACTCAGCTGCCCCTGTCCCCACCTCTGGAGAATCCA...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGCTGGGTTTGGTTCCTTaGACGTCACGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVLGLVP*TSRFLD
Trigger: ATCCAGGAACCGTGACGTCCAAGGAACCAAACCCAG...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp ATGATGCCCCGGAGCGTGCCGCCCTTGATGTACTCAGTGATGAAGTTGAGCCTCTGCAGTCACAACACCTaGAGCAGTCTGCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: MMPRSVPPLMYSVMKLSLCSHNT*SSLRAS
Trigger: ACTGGCACGCAGACTGCTTCAGGTGTTGTGACTGCA...GAGGCTCAACTTCATCACTGAGTACATCAAGGGCGGCACGCTCCGGGGCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GCCATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACGGGGTCAATGGAGACTaGAAGTCCACGCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: AIPDAMSLAKLTLWLHGYGVNGD*KSTLAM
Trigger: CATGGCAAGCGTGGACTTTCAGTCTCCATTGACCCC...GTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGAGGCGGCTGGTTTCCTaGATCAGCAGGTCAATCTCG +
Preference number: 4 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWRRLVS*ISRSIS
Trigger: CGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCT...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTATGGCCCAGTGTATCGTaGGGGTCATGCTCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLWPSVS*GSCSRV
Trigger: GACCCTCGAGCATGACCCTCACGATACACTGGGCCA...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTATCTTCTCGTCCACCATaGGACGCGCCAGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLSSRPP*DAPARS
Trigger: ACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGA...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GAACACATCCACCTTCTCATCATAGCTGCGGCCGTTGATCATCTCAGGTGCCATCGCAGGCCCTCAGGCTaGGTCTTCTCGTCCACCATG +
Preference number: 4 (lower is better)
Translates to: EHIHLLIIAAAVDHLRCHRRPSG*VFSSTM
Trigger: CATGGTGGACGAGAAGACTCAGCCTGAGGGCCTGCG...ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGTGCGGTCTGGCTTCTTaGGGCTCCGCAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKCGLAS*GSAGPQ
Trigger: CTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCA...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACGGAATCCTCGCACGTTaGGGCCAAAGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNGILAR*GQSPWC
Trigger: GCACCATGGACTTTGGCCTCAACGTGCGAGGATTCC...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACACACCTGAAGCAGTCTaGGTGCCAGTCCGCGTTCAG +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNTPEAV*VPVRVQ
Trigger: CTGAACGCGGACTGGCACGCAGACTGCTTCAGGTGT...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGCCGACGGCCGGAAGATaGGGTGTGGCCGGCAGACTA +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKPTAGR*GVAGRL
Trigger: TAGTCTGCCGGCCACACCGCATCTTCCGGCCGTCGG...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGGTCCTCGATACCTGTTaGTACCTAGACACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWVLDTC*YLDTPW
Trigger: CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGAC...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCACGGTGTGTCAAGCGACCCAGGTCCTTaGGAAGACAGGTTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RTGSAPSSPSPHLSHGVSSDPGP*EDRFLP
Trigger: CGGCAGAAACCTGTCTTCGCAAGGACCTGGGTCGCT...TGACACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACGCTGGAGCAGGCGGCTaGTTTCCTGAATCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNAGAGG*FPESAG
Trigger: ACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGC...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GCCATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACCACTCTCTGGCTCCATaGGTACTGGCTGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: AIPDAMSLAKLTLWLHGYHSLAP*VLAVHA
Trigger: AGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTG...GTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTACGGACCAGGCAGTTGTaGGAGTTGAGGTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLRTRQL*ELRSRW
Trigger: CCACCGAGACCTCAACTCCCACAACTGCCTGGTCCG...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGTCTGCTTTGGGGGTTTaGAGAGTCCTCGATACCTGT +
Preference number: 4 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVSALGV*RVLDTC
Trigger: ACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGA...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp TCGTCGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCACGGTGTAGGCGGCTGGTTTCCTaGATCAGCAGGTCAATCTCG +
Preference number: 4 (lower is better)
Translates to: SSNRISSFITITSPVSRCRRLVS*ISRSIS
Trigger: CGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCT...ACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGGAATCCTCGCACGTTaGGGCCAAAGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLGILAR*GQSPWC
Trigger: GCACCATGGACTTTGGCCTCAACGTGCGAGGATTCC...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCGCTGCTGCAGCCGTATaGAAAAATAATACAAACTCT +
Preference number: 4 (lower is better)
Translates to: APSHAPKRYMGHGSEAASAAAAV*KNNTNS
Trigger: AGAGTTTGTATTATTTTTTCATACGGCTGCAGCAGC...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGAGGTTCAAAGTGCACTaGGAAAGCTTCACAGTTTTA +
Preference number: 4 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQRFKVH*ESFTVL
Trigger: TAAAACTGTGAAGCTTTCTCAGTGCACTTTGAACCT...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp GGGTCTCCTCGTCGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCCCAGTAGTCCTTCTTaGAGAAGAGCTGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: GSPRRTGSAPSSPSPHLSPSSPS*RRAAHP
Trigger: AGGATGGGCAGCTCTTCTGCAAGAAGGACTACTGGG...AGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGAGGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTATCACATCTGGGCTCATaGAGCCCGGATCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLSHLGS*SPDPLP
Trigger: AGGGAGTGGATCCGGGCTGCATGAGCCCAGATGTGA...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGAGCATGGTGTGTGTGTaGAGCTGGGCCGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKSMVCV*SWAGSG
Trigger: CCCAGAGCCGGCCCAGCTGCACACACACACCATGCT...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGGGTCTCCGACGTGGATaGAATTCTTCACATCTGGGC +
Preference number: 4 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWGLRRG*NSSHLG
Trigger: GCCCAGATGTGAAGAATTCCATCCACGTCGGAGACC...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GCCATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACTGGCTCCATGGGTACTaGCTGTCCATGCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: AIPDAMSLAKLTLWLHGYWLHGY*LSMLLM
Trigger: CATCAAGAGCATGGACAGCCAGTACCCATGGAGCCA...GTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GGGTCTCCTCGTCGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCTGATGCGATGTCCTTaGCAAAGCTCACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GSPRRTGSAPSSPSPHLSLMRCP*QSSLSG
Trigger: GCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAG...AGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGAGGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp GAACACATCCACCTTCTCATCATAGCTGCGGCCGTTGATCATCTCAGGTGCCATCGGACCAGGCAGTTGTaGGAGTTGAGGTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: EHIHLLIIAAAVDHLRCHRTRQL*ELRSRW
Trigger: CCACCGAGACCTCAACTCCCACAACTGCCTGGTCCG...ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGAAGCGGTCCACGGGGTaGGAGAAGGCAAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKKRSTG*EKASQG
Trigger: GCCCTGACTTGCCTTCTCCCACCCCGTGGACCGCTT...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGCCCAGACTCCCCATTTaGTTCCTGGGAACACAGACA +
Preference number: 4 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRPRLPI*FLGTQT
Trigger: TGTCTGTGTTCCCAGGAACCAAATGGGGAGTCTGGG...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGCTTCACCCTGAGGCTTaGTACCTGCTTCTCACTAAA +
Preference number: 4 (lower is better)
Translates to: QEGTALPRQRLQQGESMVLHPEA*YLLLTK
Trigger: TTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAG...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
3UTR CAA 72 bp TCCATGCTCTTGATGATGCCCCGGAGCGTGCCGCCCTaGATGTACTCAGTGATGAAGTTGAGCCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SMLLMMPRSVPP*MYSVMKLSLLS
Trigger: GGACAAGAGGCTCAACTTCATCACTGAGTACATCAAGGGCGGCACGCTCCGGGGCATCATCAAGAGCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR TCA 90 bp GAACACATCCACCTTCTCATCATAGCTGCGGCCGTTGATCATCTCAGGTGCCATCATAGCTGCGGCCGTTaGTCATCTCAGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: EHIHLLIIAAAVDHLRCHHSCGR*SSQVPS
Trigger: GGATGGCACCTGAGATGATCAACGGCCGCAGCTATG...ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGGTTCTTCCCTCCAGGTaGAACAAAGTAGCGTCAACC +
Preference number: 4 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRVLPSR*NKVAST
Trigger: GGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAAC...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336180.7
CDS-3UTR GCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACAGTCCCTTGGTGATTTaGTCAGAGCACCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNSPLVI*SEHPWQ
Trigger: CTGCCATGGGTGCTCTGAGCAAATCACCAAGGGACT...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR GCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACCTGAAAGTCCACGCTTaGCATGAGATGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNLKVHA*HEMRLG
Trigger: TCCCAGCCTCATCTCATGGCAAGCGTGGACTTTCAG...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp TTGAGCACGTTGGGGTGTTCCAGGCATCGCATGACCTTCACCTCCTTGAGGAACGGTCTCCGACGTGGATaGAATTCTTCACATCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSTLGCSRHRMTFTSLRNGLRRG*NSSHLG
Trigger: GCCCAGATGTGAAGAATTCCATCCACGTCGGAGACC...GTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTACACCCAAGCGTTATATaGGGCATGGTTCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLHPSVI*GMVRRL
Trigger: CAGCCTCCGAACCATGCCCCATATAACGCTTGGGTG...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGACACCTGAAGCAGTCTaGGTGCCAGTCCGCGTTCAG +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKTPEAV*VPVRVQ
Trigger: CTGAACGCGGACTGGCACGCAGACTGCTTCAGGTGT...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAAGTCCCTTGGTGATTTaGTCAGAGCACCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLSPLVI*SEHPWQ
Trigger: CTGCCATGGGTGCTCTGAGCAAATCACCAAGGGACT...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR GCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGCAGGTAGTCAGGGTCTaGGTTCACCCGCCCGATGAT +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKQVVRV*VHPPDD
Trigger: ATCATCGGGCGGGTGAACGCAGACCCTGACTACCTG...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp GAACACATCCACCTTCTCATCATAGCTGCGGCCGTTGATCATCTCAGGTGCCATGCAAAGCTCACTCTCTaGCTCCATGGGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: EHIHLLIIAAAVDHLRCHAKLTL*LHGYWL
Trigger: CAGCCAGTACCCATGGAGCCAGAGAGTGAGCTTTGC...ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGTGGATTCTCCAGAGGTaGGGACAGGGGCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKWILQR*GQGQLS
Trigger: ACTCAGCTGCCCCTGTCCCCACCTCTGGAGAATCCA...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGGGAATCTGGTGGGGGTaGATTCTCCAGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKGIWWG*ILQRWG
Trigger: TCCCCACCTCTGGAGAATCCACCCCCACCAGATTCC...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGGGGAACACAGACACCTaGAACTTGGCCTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKGNTDT*NLASAL
Trigger: CAGGGCAGAGGCCAAGTTCCAGGTGTCTGTGTTCCC...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGGGATGGGCGTGCCATTaGTTTCCAAGATCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKGWACH*FPRSGL
Trigger: GAGACCGGATCTTGGAAATCAATGGCACGCCCATCC...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp TCGTCGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCACGGTGTATCCGGTCTCCGACGTaGATGGAATTCTTCACATCT +
Preference number: 4 (lower is better)
Translates to: SSNRISSFITITSPVSRCIRSPT*MEFFTS
Trigger: AGATGTGAAGAATTCCATCCACGTCGGAGACCGGAT...ACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CCA 90 bp AGCCCTCTCTCTGCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTATCTGCTTTGGGGGTTTaGAGAGTCCTCGATACCTGT +
Preference number: 4 (lower is better)
Translates to: SPLSALGVWRVLDTCCYLSALGV*RVLDTC
Trigger: ACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGA...TAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGGGAATTCTTCACATCTaGGCTCATGCAGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKGILHI*AHAARI
Trigger: GATCCGGGCTGCATGAGCCCAGATGTGAAGAATTCC...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGATCCGGTCTCCGACGTaGATGGAATTCTTCACATCT +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKIRSPT*MEFFTS
Trigger: AGATGTGAAGAATTCCATCCACGTCGGAGACCGGAT...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR TCA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGAGGTTCAAAGTGCACTaGGAAAGCTTCACAGTTTTA +
Preference number: 4 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKRFKVH*ESFTVL
Trigger: TAAAACTGTGAAGCTTTCTCAGTGCACTTTGAACCT...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCGAGCGACCCAGGTCCTaGCGCTGGGAGGCCGGGGAG +
Preference number: 5 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPERPRS*RWEAGE
Trigger: CTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCTC...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS CCA 90 bp CGGCAGACTACGCGGAGGGACTCAGAGCGACCCAGGTCCTTGCGCTaGGAGGCCGGGGAGCCCAGTGAGCCAGCGCCCGGAGACCTGTCG +
Preference number: 5 (lower is better)
Translates to: RQTTRRDSERPRSLR*EAGEPSEPAPGDLS
Trigger: CGACAGGTCTCCGGGCGCTGGCTCACTGGGCTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCTCTGAGTCCCTCCGCGTAGTCTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000483414.1
ENST00000538333.3
CDS-3UTR CAA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCGAGCGACCCAGGTCCTaGCGCTGGGAGGCCGGGGAG +
Preference number: 5 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIERPRS*RWEAGE
Trigger: CTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCTC...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS TCA 90 bp CTCAGAGCGACCCAGGTCCTTGCGCTGGGAGGCCGGGGAGCCCAGTaGGCCAGCGCCCGGAGACCTGTCGATGCTGCAGCTCCTCAAGAC +
Preference number: 5 (lower is better)
Translates to: LRATQVLALGGRGAQ*ASARRPVDAAAPQD
Trigger: GTCTTGAGGAGCTGCAGCATCGACAGGTCTCCGGGCGCTGGCTCACTGGGCTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCTCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000483414.1
ENST00000538333.3
CDS GCA 90 bp CCCACCTGCTCCCCAGACCGTCGTGGCGGACCCACTGCTCCCTCCTaGAAGCGCTCCCTCCCACCTGCGGGGGCACTGATGCTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: PTCSPDRRGGPTAPS*KRSLPPAGALMLLC
Trigger: ACAAAGCAGCATCAGTGCCCCCGCAGGTGGGAGGGAGCGCTTGCAGGAGGGAGCAGTGGGTCCGCCACGACGGTCTGGGGAGCAGGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476792.1
CDS GCA 90 bp TTCCTGCCGGCGAGGCCCCCGCTGTGCACCCAGCATCCTCAGAACTaGCCCGAGACCCCGTCTCTGCCTCCATTGCAGACAGGGCACCCA +
Preference number: 5 (lower is better)
Translates to: FLPARPPLCTQHPQN*PETPSLPPLQTGHP
Trigger: TGGGTGCCCTGTCTGCAATGGAGGCAGAGACGGGGTCTCGGGGCAGTTCTGAGGATGCTGGGTGCACAGCGGGGGCCTCGCCGGCAGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS-3UTR CAA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGTCGCGGACCAGGCAGTaGTGGGAGTTGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVSRTRQ*WELRSR
Trigger: CCGAGACCTCAACTCCCACAACTGCCTGGTCCGCGA...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCAGCCCTCTCTCTGCTTaGGGGGTTTGGAGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPSPLSA*GVWRVL
Trigger: GAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS GCA 90 bp CGCTGTGCACCCAGCATCCTCAGAACTGCCCCGAGACCCCGTCTCTaGCTCCATTGCAGACAGGGCACCCAGGCCTGGCCCAGGCTGACT +
Preference number: 5 (lower is better)
Translates to: RCAPSILRTAPRPRL*LHCRQGTQAWPRLT
Trigger: AGTCAGCCTGGGCCAGGCCTGGGTGCCCTGTCTGCAATGGAGGCAGAGACGGGGTCTCGGGGCAGTTCTGAGGATGCTGGGTGCACAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS-3UTR CAA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGTCCTCTGGCCGCAGCTaGCACACACGGGCAACTCGC +
Preference number: 5 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRSSGRS*HTRATR
Trigger: GCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGA...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCAGTCCCTTGGTGATTaGCTCAGAGCACCCATGGCA +
Preference number: 5 (lower is better)
Translates to: LLPIAGQGTAAPRSLKGPQSLGD*LRAPMA
Trigger: TGCCATGGGTGCTCTGAGCAAATCACCAAGGGACTG...GGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGACCCCCTTCACCCTGAGTCACGGTGTGTCACCTaGATAGCCTGGCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: PARAPQLHAPSRDPLHPESRCVT*IAWPKQ
Trigger: CTGCTTCGGCCAGGCTATCAAGGTGACACACCGTGA...CTCAGGGTGAAGGGGGTCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGCCACCACCACATTCTaGTTCTCGCGGACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWATTTF*FSRTRQ
Trigger: CTGCCTGGTCCGCGAGAACAAGAATGTGGTGGTGGC...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS GCA 90 bp CAGGGCCTGGAGGTACTGGCCATCATAGATCCTCTGGCCGCAGCTTaGACACACGGGCAACTCGCTTCCTGGAGCTGGGGCTGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: QGLEVLAIIDPLAAA*THGQLASWSWGCPA
Trigger: GGCAGGGCAGCCCCAGCTCCAGGAAGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTCCAGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CAA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGTGCCCGCAGTACAGCTaGGAGTGCTCCACCAGCGTG +
Preference number: 5 (lower is better)
Translates to: LRATSRGGIWWGWILQRWCPQYS*ECSTSV
Trigger: CACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGCA...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCATGCCCGCAGTACAGCTaGGAGTGCTCCACCAGCGTG +
Preference number: 5 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPCPQYS*ECSTSV
Trigger: CACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGCA...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGTCACGGTGTGTCACCTaGATAGCCTGGCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVSRCVT*IAWPKQ
Trigger: CTGCTTCGGCCAGGCTATCAAGGTGACACACCGTGA...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGCGGAGCGTGCCGCCCTaGATGTACTCAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVRSVPP*MYSVMK
Trigger: CTTCATCACTGAGTACATCAAGGGCGGCACGCTCCG...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCGCCACCACCACATTCTaGTTCTCGCGGACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIATTTF*FSRTRQ
Trigger: CTGCCTGGTCCGCGAGAACAAGAATGTGGTGGTGGC...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGACAGACACCTGGAACTaGGCCTCTGCCCTGATGTGC +
Preference number: 5 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWTDTWN*ASALMC
Trigger: GCACATCAGGGCAGAGGCCAAGTTCCAGGTGTCTGT...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGTTCTGCGTCTGGGTTaGGTTCCTTGGACGTCACGG +
Preference number: 5 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVVLRLG*VPWTSR
Trigger: CCGTGACGTCCAAGGAACCAAACCCAGACGCAGAAC...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACGGAAGCGGCGTCTTCTaGGGGCTGAAGCCAACAGCA +
Preference number: 5 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDGSGVF*GLKPTA
Trigger: TGCTGTTGGCTTCAGCCCCAAGAAGACGCCGCTTCC...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538333.3
CDS TCA 90 bp CCCAGGCTGGGCATCCACAAAGCTTGGCCCAGGAGAGAGCATAAGTaGTTCCTGCCGGCGAGGCCCCCGCTGTGCACCCAGCATCCTCAG +
Preference number: 5 (lower is better)
Translates to: PRLGIHKAWPRREHK*FLPARPPLCTQHPQ
Trigger: CTGAGGATGCTGGGTGCACAGCGGGGGCCTCGCCGGCAGGAATCACTTATGCTCTCTCCTGGGCCAAGCTTTGTGGATGCCCAGCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS TCA 90 bp TGCCTGTTCTACCAGACACTAGGTCTGCCCACCAGTGTCTGCCACTaGCCTGCCAGCTCCCCGCGGCCCCAGGCTGGGCATCCACAAAGC +
Preference number: 5 (lower is better)
Translates to: CLFYQTLGLPTSVCH*PASSPRPQAGHPQS
Trigger: GCTTTGTGGATGCCCAGCCTGGGGCCGCGGGGAGCTGGCAGGTCAGTGGCAGACACTGGTGGGCAGACCTAGTGTCTGGTAGAACAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS-3UTR CAA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGCGGATGGGCGTGCCATaGATTTCCAAGATCCGGTCT +
Preference number: 5 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVRMGVP*ISKIRS
Trigger: AGACCGGATCTTGGAAATCAATGGCACGCCCATCCG...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGGAGCGACCCAGGTCCTaGCGCTGGGAGGCCGGGGAG +
Preference number: 5 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWERPRS*RWEAGE
Trigger: CTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCTC...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGTCACGGTGTGTCACCTaGATAGCCTGGCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLSRCVT*IAWPKQ
Trigger: CTGCTTCGGCCAGGCTATCAAGGTGACACACCGTGA...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGCCTGATGCGATGTCCTaGGCAAAGCTCACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVPDAMS*AKLTLW
Trigger: CCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGG...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGAGGAATCCTCGCACGTaGAGGCCAAAGTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: AWVPTVPAEGHLPRRNLVRNPRT*RPKSMV
Trigger: CACCATGGACTTTGGCCTCAACGTGCGAGGATTCCT...CACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp CAGGGTGGGCAGGCAGTCCGCTCTCGCCGCGCCGGTAGGTCTCCCAGAAACCTCAGGAATCCTCGCACGTaGAGGCCAAAGTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: QGGQAVRSRRAGRSPRNLRNPRT*RPKSMV
Trigger: CACCATGGACTTTGGCCTCAACGTGCGAGGATTCCT...GAGGTTTCTGGGAGACCTACCGGCGCGGCGAGAGCGGACTGCCTGCCCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp GAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGACAGACACCTGGAACTaGGCCTCTGCCCTGATGTGC +
Preference number: 5 (lower is better)
Translates to: EAWVPTVPAEGHLPRRNLTDTWN*ASALMC
Trigger: GCACATCAGGGCAGAGGCCAAGTTCCAGGTGTCTGT...CAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp GTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGAAGCGTCCAAAGGAATaGGGTGGTCCAGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: VPTVPAEGHLPRRNLVGVKRPKE*GGPVQH
Trigger: GTGCTGGACTGGACCACCCAATTCCTTTGGACGCTT...CACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS CCA 90 bp CACCAGTGTCTGCCACTGACCTGCCAGCTCCCCGCGGCCCCAGGCTaGGCATCCACAAAGCTTGGCCCAGGAGAGAGCATAAGTGATTCC +
Preference number: 5 (lower is better)
Translates to: HQCLPLTCQLPAAPG*ASTKLGPGESISDS
Trigger: GGAATCACTTATGCTCTCTCCTGGGCCAAGCTTTGTGGATGCCCAGCCTGGGGCCGCGGGGAGCTGGCAGGTCAGTGGCAGACACTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS-3UTR CAA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACCAGTCCCTTGGTGATTaGCTCAGAGCACCCATGGCA +
Preference number: 5 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDQSLGD*LRAPMA
Trigger: TGCCATGGGTGCTCTGAGCAAATCACCAAGGGACTG...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCCGGATGGGCGTGCCATaGATTTCCAAGATCCGGTCT +
Preference number: 5 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIRMGVP*ISKIRS
Trigger: AGACCGGATCTTGGAAATCAATGGCACGCCCATCCG...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACCGGATGGGCGTGCCATaGATTTCCAAGATCCGGTCT +
Preference number: 5 (lower is better)
Translates to: GPPPAEESGGGGFSRGGDRMGVP*ISKIRS
Trigger: AGACCGGATCTTGGAAATCAATGGCACGCCCATCCG...GTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCAGCACCCCGATGAACTaGAGCACGTTGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: APSHAPKRYMGHGSEAASSTPMN*STLGCS
Trigger: GGAACACCCCAACGTGCTCAAGTTCATCGGGGTGCT...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CTCGCCGCGCCGGTAGGTCTCCCAGAAACCTCTGTCCAGCTGCTCCAGCTGTGGAGCACCCCGATGAACTaGAGCACGTTGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: LAAPVGLPETSVQLLQLWSTPMN*STLGCS
Trigger: GGAACACCCCAACGTGCTCAAGTTCATCGGGGTGCT...CCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp CTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGAGCACCCCGATGAACTaGAGCACGTTGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: LRATSRGGIWWGWILQRWSTPMN*STLGCS
Trigger: GGAACACCCCAACGTGCTCAAGTTCATCGGGGTGCT...CCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGCGGAGCGTGCCGCCCTaGATGTACTCAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQRSVPP*MYSVMK
Trigger: CTTCATCACTGAGTACATCAAGGGCGGCACGCTCCG...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GAGAAGCCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCCCTGATGCGATGTCCTaGGCAAAGCTCACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: EKPGSPLSQLRATSRGGIPDAMS*AKLTLW
Trigger: CCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGG...GATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp GGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTTCGCGGACCAGGCAGTaGTGGGAGTTGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: GLVPWTSRFLDGGGWVPPSRTRQ*WELRSR
Trigger: CCGAGACCTCAACTCCCACAACTGCCTGGTCCGCGA...AGGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGGCCCCAGACTCCCCATTaGGTTCCTGGGAACACAGAC +
Preference number: 5 (lower is better)
Translates to: PPPAEESGGGGFSRGGDRPQTPH*VPGNTD
Trigger: GTCTGTGTTCCCAGGAACCAAATGGGGAGTCTGGGG...CCTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp GCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAGAGGTGGGGACAGAGCCCTCTCTCTGCTTaGGGGGTTTGGAGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: ATSRGGIWWGWILQRWGQSPLSA*GVWRVL
Trigger: GAGGACTCTCCAAACCCCCAAAGCAGAGAGAGGGCT...CTGTCCCCACCTCTGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS GCA 90 bp TCAGCCACCACCACATTCTTGTTCTGGGAAGGTGAAGCCGGGTCATaGTGGGACCCGATCCTAGTACTGCCCGCTTGGCCTGCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: SATTTFLFWEGEAGS*WDPILVLPAWPAPP
Trigger: GGGAGGGGCAGGCCAAGCGGGCAGTACTAGGATCGGGTCCCAGCATGACCCGGCTTCACCTTCCCAGAACAAGAATGTGGTGGTGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476792.1
CDS GCA 90 bp TGGGCATCCACAAAGCTTGGCCCAGGAGAGAGCATAAGTGATTCCTaGCGGCGAGGCCCCCGCTGTGCACCCAGCATCCTCAGAACTGCC +
Preference number: 5 (lower is better)
Translates to: WASTKLGPGESISDS*RRGPRCAPSILRTA
Trigger: GGCAGTTCTGAGGATGCTGGGTGCACAGCGGGGGCCTCGCCGGCAGGAATCACTTATGCTCTCTCCTGGGCCAAGCTTTGTGGATGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS-3UTR CAA 90 bp CCTGGGTCCCCACTGTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGACCATAACCAGTCCCTaGGTGATTTGCTCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: PGSPLSQLRATSRGGIWWTITSP*VICSEH
Trigger: GTGCTCTGAGCAAATCACCAAGGGACTGGTTATGGT...CCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGACAGTGGGGACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000538333.3
CDS-3UTR CAA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGTGCCCGCAGTACAGCTaGGAGTGCTCCACCAGCGTG +
Preference number: 5 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVCPQYS*ECSTSV
Trigger: CACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGCA...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp GGTGTAGCGCTTCTTGCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGTCACGGTGTGTCACCTaGATAGCCTGGCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: GVALLAVWLLEAPQALRLSRCVT*IAWPKQ
Trigger: CTGCTTCGGCCAGGCTATCAAGGTGACACACCGTGA...CAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCCGGAGCGTGCCGCCCTaGATGTACTCAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTRSVPP*MYSVMK
Trigger: CTTCATCACTGAGTACATCAAGGGCGGCACGCTCCG...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CCGGCCAGGTGCATGCGGAGGGTCTCCAGCCAGTGTTCCAGCTTCACAAAGGATTCGCGGACCAGGCAGTaGTGGGAGTTGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: PARCMRRVSSQCSSFTKDSRTRQ*WELRSR
Trigger: CCGAGACCTCAACTCCCACAACTGCCTGGTCCGCGA...ATCCTTTGTGAAGCTGGAACACTGGCTGGAGACCCTCCGCATGCACCTGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCCCCCAGACTCCCCATTaGGTTCCTGGGAACACAGAC +
Preference number: 5 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTPQTPH*VPGNTD
Trigger: GTCTGTGTTCCCAGGAACCAAATGGGGAGTCTGGGG...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp GCGCCCTCCCACGCACCCAAGCGTTATATGGGGCATGGTTCGGAGGCTGCCTCCTCTGGGTTTGGTTCCTaGGACGTCACGGTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: APSHAPKRYMGHGSEAASSGFGS*DVTVPG
Trigger: TCCAGGAACCGTGACGTCCAAGGAACCAAACCCAGA...GGAGGCAGCCTCCGAACCATGCCCCATATAACGCTTGGGTGCGTGGGAGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS GCA 90 bp AGAAGGGCCCAGCAAGGTCACCTGCGCAGTGGCAGCACTGAGCCATaGCAGGAGAACGGGGCTTTGGGCTCAAATCATTTGGGGGAGACG +
Preference number: 5 (lower is better)
Translates to: RRAQQGHLRSGSTEP*QENGALGSNHLGET
Trigger: CGTCTCCCCCAAATGATTTGAGCCCAAAGCCCCGTTCTCCTGGCATGGCTCAGTGCTGCCACTGCGCAGGTGACCTTGCTGGGCCCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS-3UTR CAA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGTCCTCTGGCCGCAGCTaGCACACACGGGCAACTCGC +
Preference number: 5 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWSSGRS*HTRATR
Trigger: GCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGA...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGGAGAGAAGGGGCTGTTaGCTCAGCCACTGGGGACCT +
Preference number: 5 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVERRGC*LSHWGP
Trigger: AGGTCCCCAGTGGCTGAGCAAACAGCCCCTTCTCTC...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp GGGTTTGGTTCCTTGGACGTCACGGTTCCTGGATGGGGGTGGGTGGGTCCCACCTCTGGGTTTGGTTCCTaGGACGTCACGGTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GFGSLDVTVPGWGWVGPTSGFGS*DVTVPG
Trigger: TCCAGGAACCGTGACGTCCAAGGAACCAAACCCAGA...GGTGGGACCCACCCACCCCCATCCAGGAACCGTGACGTCCAAGGAACCAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp TCGTCGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCACGGTGTTCCTCTGGCCGCAGCTaGCACACACGGGCAACTCGC +
Preference number: 5 (lower is better)
Translates to: SSNRISSFITITSPVSRCSSGRS*HTRATR
Trigger: GCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGA...ACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGAGCACCCCGATGAACTaGAGCACGTTGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVSTPMN*STLGCS
Trigger: GGAACACCCCAACGTGCTCAAGTTCATCGGGGTGCT...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CGGCTCCTCCCCATCGCCGGCCAGGGCACCGCAGCTCCACGCTCCCTCAAGGGAACGGAATTTATTTTATaGTTCTGCGTCTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: RLLPIAGQGTAAPRSLKGTEFIL*FCVWVW
Trigger: CCAAACCCAGACGCAGAACAATAAAATAAATTCCGT...TCCCTTGAGGGAGCGTGGAGCTGCGGTGCCCTGGCCGGCGATGGGGAGGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS GCA 90 bp CAGGGCCTGGAGGTACTGGCCATCATAGATCCTCTGGCCGCAGCTTaGACACACGGGCAACTCGCTTCCTTCCTCTCCCATACGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QGLEVLAIIDPLAAA*THGQLASFLSHTFF
Trigger: GAAGAACGTATGGGAGAGGAAGGAAGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTCCAGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000435201.5
CDS CCA 90 bp CTGGAGGGAGCACGGGTTTGGGCTGAGTCAAGCGTCCAAAGGAATTaGGTGGTCCAGTCCAGCACTGATGGTGGAACGCCCTGCCTAGAT +
Preference number: 5 (lower is better)
Translates to: LEGARVWAESSVQRN*VVQSSTDGGTPCLD
Trigger: ATCTAGGCAGGGCGTTCCACCATCAGTGCTGGACTGGACCACCCAATTCCTTTGGACGCTTGACTCAGCCCAAACCCGTGCTCCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CAA 90 bp GCGGTCTGGCTTCTTGAGGCTCCGCAGGCCCTCAGGCTGAGTCTTCTCGTCCACACCATAACCAGTCCCTaGGTGATTTGCTCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: AVWLLEAPQALRLSLLVHTITSP*VICSEH
Trigger: GTGCTCTGAGCAAATCACCAAGGGACTGGTTATGGT...GTGGACGAGAAGACTCAGCCTGAGGGCCTGCGGAGCCTCAAGAAGCCAGACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp CGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCACGGTGTGTCATGCCCGCAGTACAGCTaGGAGTGCTCCACCAGCGTG +
Preference number: 5 (lower is better)
Translates to: RTGSAPSSPSPHLSHGVSCPQYS*ECSTSV
Trigger: CACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGCA...TGACACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp CCGGCCAGGTGCATGCGGAGGGTCTCCAGCCAGTGTTCCAGCTTCACAAAGGATCGGATGGGCGTGCCATaGATTTCCAAGATCCGGTCT +
Preference number: 5 (lower is better)
Translates to: PARCMRRVSSQCSSFTKDRMGVP*ISKIRS
Trigger: AGACCGGATCTTGGAAATCAATGGCACGCCCATCCG...ATCCTTTGTGAAGCTGGAACACTGGCTGGAGACCCTCCGCATGCACCTGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGCCTGATGCGATGTCCTaGGCAAAGCTCACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: QEGTALPRQRLQQGESMVPDAMS*AKLTLW
Trigger: CCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGG...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CAAGAGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGAGTCCTCGATACCTGTaGCTACCTAGACACCCCCTG +
Preference number: 5 (lower is better)
Translates to: QEGTALPRQRLQQGESMVSPRYL*LPRHPL
Trigger: CAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACT...CACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp AGGGGACAGCCCTGCCAAGACAGAGGTTACAGCAGGGCGAGAGCATGGTGTGTGAGTCCTCGATACCTGTaGCTACCTAGACACCCCCTG +
Preference number: 5 (lower is better)
Translates to: RGQPCQDRGYSRARAWCVSPRYL*LPRHPL
Trigger: CAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACT...CACACACCATGCTCTCGCCCTGCTGTAACCTCTGTCTTGGCAGGGCTGTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp GCCATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACGAGCGACCCAGGTCCTaGCGAAGACAGGTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: AIPDAMSLAKLTLWLHGYERPRS*RRQVSA
Trigger: GGCAGAAACCTGTCTTCGCAAGGACCTGGGTCGCTC...GTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS CCA 90 bp GTGTATCGTGAGGGTCATGCTCGAGGGTCAGCTGGAGCAGGCGGCTaGTTTCCTGAATCAGCAGGTCAATCTCGTCCAGGGGCACATTTC +
Preference number: 5 (lower is better)
Translates to: VYREGHARGSAGAGG*FPESAGQSRPGAHF
Trigger: GAAATGTGCCCCTGGACGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCATGACCCTCACGATACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS-3UTR CAA 90 bp TCGTCGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCACGGTGTGCCACCACCACATTCTaGTTCTCGCGGACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSNRISSFITITSPVSRCATTTF*FSRTRQ
Trigger: CTGCCTGGTCCGCGAGAACAAGAATGTGGTGGTGGC...ACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp GAAAGGGGCGTAACTCACACAGGCCCTCCAGCTCATGCAAGGAGAAGCAAGAGGGTTCTGCGTCTGGGTTaGGTTCCTTGGACGTCACGG +
Preference number: 5 (lower is better)
Translates to: ERGVTHTGPPAHARRSKRVLRLG*VPWTSR
Trigger: CCGTGACGTCCAAGGAACCAAACCCAGACGCAGAAC...CCTCTTGCTTCTCCTTGCATGAGCTGGAGGGCCTGTGTGAGTTACGCCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS CCA 90 bp GGATACAAGGTAATCCAACCTGAGGAAGATCCCATGGTCTCAGGGTaGTACAGAAATGGGGCTGGAGGCCAGGACTGGATCCCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GYKVIQPEEDPMVSG*YRNGAGGQDWIPRV
Trigger: CACCCTGGGGATCCAGTCCTGGCCTCCAGCCCCATTTCTGTACCACCCTGAGACCATGGGATCTTCCTCAGGTTGGATTACCTTGTATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS CCA 90 bp ACCTGCGCAGTGGCAGCACTGAGCCATGCCAGGAGAACGGGGCTTTaGGCTCAAATCATTTGGGGGAGACGCCTCATTCTCAAACCTCAT +
Preference number: 5 (lower is better)
Translates to: TCAVAALSHARRTGL*AQIIWGRRLILKPH
Trigger: ATGAGGTTTGAGAATGAGGCGTCTCCCCCAAATGATTTGAGCCCAAAGCCCCGTTCTCCTGGCATGGCTCAGTGCTGCCACTGCGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS-3UTR CAA 90 bp TCGTCGAACCGGATCAGCTCCTTCATCACCATCACCTCACCTGTCTCACGGTGTCGGAGCGTGCCGCCCTaGATGTACTCAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: SSNRISSFITITSPVSRCRSVPP*MYSVMK
Trigger: CTTCATCACTGAGTACATCAAGGGCGGCACGCTCCG...ACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS-3UTR CAA 90 bp GCCATCCCTGATGCGATGTCCTTGGCAAAGCTCACTCTCTGGCTCCATGGGTACCCTGATGCGATGTCCTaGGCAAAGCTCACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: AIPDAMSLAKLTLWLHGYPDAMS*AKLTLW
Trigger: CCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGG...GTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435201.5
CDS CCA 90 bp GACAGCCCAGAGAACATACCTCTGATACGCTGTATTGGCACAGGGTaGGGACCCCTTCCTTCCCCAAACCCATCCGCTCTTTGCAAATGG +
Preference number: 5 (lower is better)
Translates to: DSPENIPLIRCIGTG*GPLPSPNPSALCKW
Trigger: CCATTTGCAAAGAGCGGATGGGTTTGGGGAAGGAAGGGGTCCCCACCCTGTGCCAATACAGCGTATCAGAGGTATGTTCTCTGGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476792.1
CDS-3UTR CAA 90 bp GTCCCAGCTGAGGGCCACCTCCCGCGGAGGAATCTGGTGGGGGTGGATTCTCCAACGGAATTTATTTTATaGTTCTGCGTCTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: VPAEGHLPRRNLVGVDSPTEFIL*FCVWVW
Trigger: CCAAACCCAGACGCAGAACAATAAAATAAATTCCGT...TGGAGAATCCACCCCCACCAGATTCCTCCGCGGGAGGTGGCCCTCAGCTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS TCA 90 bp CAGGAGCCCATAGGGTCCACACCTTGGATACAAGGTAATCCAACCTaGGGAAGATCCCATGGTCTCAGGGTGGTACAGAAATGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: QEPIGSTPWIQGNPT*GRSHGLRVVQKWGW
Trigger: CCAGCCCCATTTCTGTACCACCCTGAGACCATGGGATCTTCCTCAGGTTGGATTACCTTGTATCCAAGGTGTGGACCCTATGGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS TCA 90 bp GTGAGCCACTGCGCTTGGCCTAGCCCAGAGTTTCTAAATTGCACCTaGCAACGGAACCCGTTGTGTCAAGTTACACCTAGCAGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: VSHCAWPSPEFLNCT*QRNPLCQVTPSRSP
Trigger: TGGGCTCCTGCTAGGTGTAACTTGACACAACGGGTTCCGTTGTCAGGTGCAATTTAGAAACTCTGGGCTAGGCCAAGCGCAGTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS CCA 90 bp TTTCGGATGGGCGTGCCATTGATTTCCAAGATCCGGTCTCCGACGTaGATGGAATTCTTCACATCTGGGCTCATGCAGCCCGGATCCACT +
Preference number: 5 (lower is better)
Translates to: FRMGVPLISKIRSPT*MEFFTSGLMQPGST
Trigger: AGTGGATCCGGGCTGCATGAGCCCAGATGTGAAGAATTCCATCCACGTCGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS-3UTR CAA 90 bp GCTTTGGGGGTTTGGAGAGTCCTCGATACCTGTTGCTACCTAGACACCCCCTGGACCATAACCAGTCCCTaGGTGATTTGCTCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: ALGVWRVLDTCCYLDTPWTITSP*VICSEH
Trigger: GTGCTCTGAGCAAATCACCAAGGGACTGGTTATGGT...CCAGGGGGTGTCTAGGTAGCAACAGGTATCGAGGACTCTCCAAACCCCCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGGAGAGAAGGGGCTGTTaGCTCAGCCACTGGGGACCT +
Preference number: 5 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKERRGC*LSHWGP
Trigger: AGGTCCCCAGTGGCTGAGCAAACAGCCCCTTCTCTC...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS TCA 90 bp GCAGGTCAATCTCGTCCAGGGGCACATTTCGGATGGGCGTGCCATTaGTTTCCAAGATCCGGTCTCCGACGTGGATGGAATTCTTCACAT +
Preference number: 5 (lower is better)
Translates to: AGQSRPGAHFGWACH*FPRSGLRRGWNSSH
Trigger: ATGTGAAGAATTCCATCCACGTCGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGAAATGTGCCCCTGGACGAGATTGACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS GCA 90 bp CAAAGGAATTGGGTGGTCCAGTCCAGCACTGATGGTGGAACGCCCTaGCTAGATGTGGACAATTCTAGAATGCTGGACATGGGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: QRNWVVQSSTDGGTP*LDVDNSRMLDMGRK
Trigger: CTTCCTGCCCATGTCCAGCATTCTAGAATTGTCCACATCTAGGCAGGGCGTTCCACCATCAGTGCTGGACTGGACCACCCAATTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS-3UTR CAA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGAGGAATCCTCGCACGTaGAGGCCAAAGTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKRNPRT*RPKSMV
Trigger: CACCATGGACTTTGGCCTCAACGTGCGAGGATTCCT...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGCTCTGCTTTGGGGGTTaGGAGAGTCCTCGATACCTG +
Preference number: 5 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKLCFGG*ESPRYL
Trigger: CAGGTATCGAGGACTCTCCAAACCCCCAAAGCAGAG...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS-3UTR CAA 90 bp CCCCTTCACCCTGAGGCTTGGTACCTGCTTCTCACTAAAGTGGCTTTAAGAAAGACCATAACCAGTCCCTaGGTGATTTGCTCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: PLHPEAWYLLLTKVALRKTITSP*VICSEH
Trigger: GTGCTCTGAGCAAATCACCAAGGGACTGGTTATGGT...CTTTCTTAAAGCCACTTTAGTGAGAAGCAGGTACCAAGCCTCAGGGTGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000418310.5
CDS CCA 90 bp AATAACAGGTGTGCACCATTGTACCTGGCCTTTCCTAGCTTTAGATaGAGTCAGTCGCTCCCCTTTTTGATTAGGAATCAGGGTTCAGAG +
Preference number: 5 (lower is better)
Translates to: NNRCAPLYLAFPSFR*SQSLPFLIRNQGSE
Trigger: CTCTGAACCCTGATTCCTAATCAAAAAGGGGAGCGACTGACTCCATCTAAAGCTAGGAAAGGCCAGGTACAATGGTGCACACCTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS TCA 72 bp GCAGCCCGGATCCACTCCCTGGACGCGGACGGTGTGTaGGTGCTCGGTGCCACAGCCCGGTGGGCCGTGCGG +
Preference number: 6 (lower is better)
Translates to: AARIHSLDADGV*VLGATARWAVR
Trigger: CCGCACGGCCCACCGGGCTGTGGCACCGAGCACTCACACACCGTCCGCGTCCAGGGAGTGGATCCGGGCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000491052.5
ENST00000538333.3
CDS CAA 90 bp TGTGGCCGGCAGACTACGCGGAGGGACTCAGAGCGACCCAGGTCCTaGCGCTGGGAGGCCGGGGAGCCCAGTGAGCCAGCGCCCGGAGAC +
Preference number: 6 (lower is better)
Translates to: CGRQTTRRDSERPRS*RWEAGEPSEPAPGD
Trigger: GTCTCCGGGCGCTGGCTCACTGGGCTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCTCTGAGTCCCTCCGCGTAGTCTGCCGGCCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000483414.1
ENST00000538333.3
CDS GCA 72 bp TCCCCAGACCGTCGTGGCGGACCCACTGCTCCCTCCTaGAAGCGCTCCCTCCCACCTGCGGGGGCACTGATG +
Preference number: 6 (lower is better)
Translates to: SPDRRGGPTAPS*KRSLPPAGALM
Trigger: CATCAGTGCCCCCGCAGGTGGGAGGGAGCGCTTGCAGGAGGGAGCAGTGGGTCCGCCACGACGGTCTGGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476792.1
CDS CCA 72 bp CCCGTGGATGAGGTCCGACGGCCGGAAGATGCGGTGTaGCCGGCAGACTACGCGGAGGGACTCAGAGCGACC +
Preference number: 6 (lower is better)
Translates to: PVDEVRRPEDAV*PADYAEGLRAT
Trigger: GGTCGCTCTGAGTCCCTCCGCGTAGTCTGCCGGCCACACCGCATCTTCCGGCCGTCGGACCTCATCCACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS GCA 72 bp CCCAGCATCCTCAGAACTGCCCCGAGACCCCGTCTCTaGCTCCATTGCAGACAGGGCACCCAGGCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: PSILRTAPRPRL*LHCRQGTQAWP
Trigger: GGGCCAGGCCTGGGTGCCCTGTCTGCAATGGAGGCAGAGACGGGGTCTCGGGGCAGTTCTGAGGATGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS CCA 72 bp CAGGTTTCTGCCGGGCAGAGCTGCCCGCCTCCCCGCTaGGAGTATAAGCCGGAGAGCTCAGGGGGCTGGTCT +
Preference number: 6 (lower is better)
Translates to: QVSAGQSCPPPR*EYKPESSGGWS
Trigger: AGACCAGCCCCCTGAGCTCTCCGGCTTATACTCCCAGCGGGGAGGCGGGCAGCTCTGCCCGGCAGAAACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS CCA 72 bp GAGGGAGCTGCTTTGCCCGGGGCCGCACAGCGGGGGTaGCTGGCTCTGCCCAGGACTCACCATGCTCTTGAT +
Preference number: 6 (lower is better)
Translates to: EGAALPGAAQRG*LALPRTHHALD
Trigger: ATCAAGAGCATGGTGAGTCCTGGGCAGAGCCAGCCACCCCCGCTGTGCGGCCCCGGGCAAAGCAGCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS TCA 72 bp TACCAGACACTAGGTCTGCCCACCAGTGTCTGCCACTaGCCTGCCAGCTCCCCGCGGCCCCAGGCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: YQTLGLPTSVCH*PASSPRPQAGH
Trigger: ATGCCCAGCCTGGGGCCGCGGGGAGCTGGCAGGTCAGTGGCAGACACTGGTGGGCAGACCTAGTGTCTGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS GCA 72 bp GGGAGCCCAGTGAGCCAGCGCCCGGAGACCTGTCGATaGTGCAGCTCCTCAAGACAGGTTTCTGCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: GSPVSQRPETCR*CSSSRQVSAGQ
Trigger: CTGCCCGGCAGAAACCTGTCTTGAGGAGCTGCAGCATCGACAGGTCTCCGGGCGCTGGCTCACTGGGCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000483414.1
ENST00000538333.3
CDS GCA 72 bp CTCAGAACTGCCCCGAGACCCCGTCTCTGCCTCCATTaGAGACAGGGCACCCAGGCCTGGCCCAGGCTGACT +
Preference number: 6 (lower is better)
Translates to: LRTAPRPRLCLH*RQGTQAWPRLT
Trigger: AGTCAGCCTGGGCCAGGCCTGGGTGCCCTGTCTGCAATGGAGGCAGAGACGGGGTCTCGGGGCAGTTCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS GCA 72 bp GCGAGGCCCCCGCTGTGCACCCAGCATCCTCAGAACTaGCCCGAGACCCCGTCTCTGCCTCCATTGCAGACA +
Preference number: 6 (lower is better)
Translates to: ARPPLCTQHPQN*PETPSLPPLQT
Trigger: TGTCTGCAATGGAGGCAGAGACGGGGTCTCGGGGCAGTTCTGAGGATGCTGGGTGCACAGCGGGGGCCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS CCA 72 bp CTGCCACTGACCTGCCAGCTCCCCGCGGCCCCAGGCTaGGCATCCACAAAGCTTGGCCCAGGAGAGAGCATA +
Preference number: 6 (lower is better)
Translates to: LPLTCQLPAAPG*ASTKLGPGESI
Trigger: TATGCTCTCTCCTGGGCCAAGCTTTGTGGATGCCCAGCCTGGGGCCGCGGGGAGCTGGCAGGTCAGTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS CCA 72 bp GAGCTGCTTTGCCCGGGGCCGCACAGCGGGGGTGGCTaGCTCTGCCCAGGACTCACCATGCTCTTGATGATG +
Preference number: 6 (lower is better)
Translates to: ELLCPGPHSGGG*LCPGLTMLLMM
Trigger: CATCATCAAGAGCATGGTGAGTCCTGGGCAGAGCCAGCCACCCCCGCTGTGCGGCCCCGGGCAAAGCAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS CAA 72 bp GAAGAGATGAGACTGAGGCTCACAGAGGGAGCTGCTTaGCCCGGGGCCGCACAGCGGGGGTGGCTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: EEMRLRLTEGAA*PGAAQRGWLAL
Trigger: CAGAGCCAGCCACCCCCGCTGTGCGGCCCCGGGCAAAGCAGCTCCCTCTGTGAGCCTCAGTCTCATCTCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS CAA 72 bp GGGGGTGGCTGGCTCTGCCCAGGACTCACCATGCTCTaGATGATGCCCCGGAGCGTGCCGCCCTTGATGTAC +
Preference number: 6 (lower is better)
Translates to: GGGWLCPGLTML*MMPRSVPPLMY
Trigger: GTACATCAAGGGCGGCACGCTCCGGGGCATCATCAAGAGCATGGTGAGTCCTGGGCAGAGCCAGCCACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS CAA 90 bp TCAGGGCCTGGAGGTACTGGCCATCATAGATCCTCTGGCCGCAGCTaGCACACACGGGCAACTCGCTTCCTGGAGCTGGGGCTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SGPGGTGHHRSSGRS*HTRATRFLELGLPC
Trigger: GCAGGGCAGCCCCAGCTCCAGGAAGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTCCAGGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS CAA 90 bp CCGCACAGCGGGGGTGGCTGGCTCTGCCCAGGACTCACCATGCTCTaGATGATGCCCCGGAGCGTGCCGCCCTTGATGTACTCAGTGATG +
Preference number: 6 (lower is better)
Translates to: PHSGGGWLCPGLTML*MMPRSVPPLMYSVM
Trigger: CATCACTGAGTACATCAAGGGCGGCACGCTCCGGGGCATCATCAAGAGCATGGTGAGTCCTGGGCAGAGCCAGCCACCCCCGCTGTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS TCA 72 bp GGTGGGAGCCAGGGGAGTCAGGCAGGATCTGCTCGATaGCGGGGGTCACCACAGTCTGGTAGTAGCAGTGCC +
Preference number: 6 (lower is better)
Translates to: GGSQGSQAGSAR*RGSPQSGSSSA
Trigger: GGCACTGCTACTACCAGACTGTGGTGACCCCCGTCATCGAGCAGATCCTGCCTGACTCCCCTGGCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000491052.5
ENST00000538333.3
CDS GCA 72 bp GAGGTACTGGCCATCATAGATCCTCTGGCCGCAGCTTaGACACACGGGCAACTCGCTTCCTGGAGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: EVLAIIDPLAAA*THGQLASWSWG
Trigger: GCCCCAGCTCCAGGAAGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS GCA 72 bp ACAAAGCTTGGCCCAGGAGAGAGCATAAGTGATTCCTaGCGGCGAGGCCCCCGCTGTGCACCCAGCATCCTC +
Preference number: 6 (lower is better)
Translates to: TKLGPGESISDS*RRGPRCAPSIL
Trigger: GAGGATGCTGGGTGCACAGCGGGGGCCTCGCCGGCAGGAATCACTTATGCTCTCTCCTGGGCCAAGCTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS CAA 72 bp GGAGGTACTGGCCATCATAGATCCTCTGGCCGCAGCTaGCACACACGGGCAACTCGCTTCCTGGAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GGTGHHRSSGRS*HTRATRFLELG
Trigger: CCCCAGCTCCAGGAAGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS GCA 72 bp CTCCGACGTGGATGGAATTCTTCACATCTGGGCTCATaGAGCCCGGATCCACTCCCTGGACGCGGACGGTGT +
Preference number: 6 (lower is better)
Translates to: LRRGWNSSHLGS*SPDPLPGRGRC
Trigger: ACACCGTCCGCGTCCAGGGAGTGGATCCGGGCTGCATGAGCCCAGATGTGAAGAATTCCATCCACGTCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS CCA 72 bp GAGGGTCATGCTCGAGGGTCAGCTGGAGCAGGCGGCTaGTTTCCTGAATCAGCAGGTCAATCTCGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: EGHARGSAGAGG*FPESAGQSRPG
Trigger: CCCTGGACGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCATGACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS TCA 72 bp CCTCCTGCAAGCGCTCCCTCCCACCTGCGGGGGCACTaGTGCTGCTTTGTTTCGGAGAGAAGACAGGAATTC +
Preference number: 6 (lower is better)
Translates to: PPASAPSHLRGH*CCFVSERRQEF
Trigger: GAATTCCTGTCTTCTCTCCGAAACAAAGCAGCATCAGTGCCCCCGCAGGTGGGAGGGAGCGCTTGCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476792.1
CDS CCA 72 bp GGGTTTGGGCTGAGTCAAGCGTCCAAAGGAATTGGGTaGTCCAGTCCAGCACTGATGGTGGAACGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: GFGLSQASKGIG*SSPALMVERPA
Trigger: GGCAGGGCGTTCCACCATCAGTGCTGGACTGGACCACCCAATTCCTTTGGACGCTTGACTCAGCCCAAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS CCA 72 bp GCACGGGTTTGGGCTGAGTCAAGCGTCCAAAGGAATTaGGTGGTCCAGTCCAGCACTGATGGTGGAACGCCC +
Preference number: 6 (lower is better)
Translates to: ARVWAESSVQRN*VVQSSTDGGTP
Trigger: GGGCGTTCCACCATCAGTGCTGGACTGGACCACCCAATTCCTTTGGACGCTTGACTCAGCCCAAACCCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS CCA 72 bp ACATTCTTGTTCTGGGAAGGTGAAGCCGGGTCATGCTaGGACCCGATCCTAGTACTGCCCGCTTGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: TFLFWEGEAGSC*DPILVLPAWPA
Trigger: GGCAGGCCAAGCGGGCAGTACTAGGATCGGGTCCCAGCATGACCCGGCTTCACCTTCCCAGAACAAGAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476792.1
CDS CAA 72 bp CAGCTCCCCAGCCACCATAACCAGTCCCTTGGTGATTaGCTCAGAGCACCCATGGCAGGACTCGCCATAGCG +
Preference number: 6 (lower is better)
Translates to: QLPSHHNQSLGD*LRAPMAGLAIA
Trigger: CGCTATGGCGAGTCCTGCCATGGGTGCTCTGAGCAAATCACCAAGGGACTGGTTATGGTGGCTGGGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000486361.5
ENST00000491052.5
ENST00000538333.3
CDS CAA 90 bp TCAGGGCCTGGAGGTACTGGCCATCATAGATCCTCTGGCCGCAGCTaGCACACACGGGCAACTCGCTTCCTTCCTCTCCCATACGTTCTT +
Preference number: 6 (lower is better)
Translates to: SGPGGTGHHRSSGRS*HTRATRFLPLPYVL
Trigger: AAGAACGTATGGGAGAGGAAGGAAGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTCCAGGCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000435201.5
CDS CAA 90 bp CCCGAGGGTTTGAGTGCACTTGGCTTCCCTCCGGTCACCACTTCCTaGATGCCTGTTCTACCAGACACTAGGTCTGCCCACCAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: PEGLSALGFPPVTTS*MPVLPDTRSAHQCL
Trigger: CAGACACTGGTGGGCAGACCTAGTGTCTGGTAGAACAGGCATCAAGGAAGTGGTGACCGGAGGGAAGCCAAGTGCACTCAAACCCTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS TCA 72 bp TGCTCGAGGGTCAGCTGGAGCAGGCGGCTGGTTTCCTaGATCAGCAGGTCAATCTCGTCCAGGGGCACATTT +
Preference number: 6 (lower is better)
Translates to: CSRVSWSRRLVS*ISRSISSRGTF
Trigger: AAATGTGCCCCTGGACGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS TCA 72 bp CTCAGCTCCCTACAACCTTCGCCTCCGGGGCTCAAGTaGTTCTTGTGTCTCAGCCTCCTGAGTAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LSSLQPSPPGLK*FLCLSLLSSWD
Trigger: GTCCCAGCTACTCAGGAGGCTGAGACACAAGAATCACTTGAGCCCCGGAGGCGAAGGTTGTAGGGAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS GCA 72 bp GAGGTACTGGCCATCATAGATCCTCTGGCCGCAGCTTaGACACACGGGCAACTCGCTTCCTTCCTCTCCCAT +
Preference number: 6 (lower is better)
Translates to: EVLAIIDPLAAA*THGQLASFLSH
Trigger: ATGGGAGAGGAAGGAAGCGAGTTGCCCGTGTGTGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336180.7
ENST00000435201.5
CDS GCA 72 bp ACCACATTCTTGTTCTGGGAAGGTGAAGCCGGGTCATaGTGGGACCCGATCCTAGTACTGCCCGCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: TTFLFWEGEAGS*WDPILVLPAWP
Trigger: AGGCCAAGCGGGCAGTACTAGGATCGGGTCCCAGCATGACCCGGCTTCACCTTCCCAGAACAAGAATGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476792.1
CDS GCA 72 bp GGGAGGCACTGCAGTCACAACACCCGAGGGTTTGAGTaGACTTGGCTTCCCTCCGGTCACCACTTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: GRHCSHNTRGFE*TWLPSGHHFLD
Trigger: ATCAAGGAAGTGGTGACCGGAGGGAAGCCAAGTGCACTCAAACCCTCGGGTGTTGTGACTGCAGTGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS GCA 72 bp CAGCAAGGTCACCTGCGCAGTGGCAGCACTGAGCCATaGCAGGAGAACGGGGCTTTGGGCTCAAATCATTTG +
Preference number: 6 (lower is better)
Translates to: QQGHLRSGSTEP*QENGALGSNHL
Trigger: CAAATGATTTGAGCCCAAAGCCCCGTTCTCCTGGCATGGCTCAGTGCTGCCACTGCGCAGGTGACCTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS CAA 72 bp TGGTACTTCAGCTCCCCAGCCACCATAACCAGTCCCTaGGTGATTTGCTCAGAGCACCCATGGCAGGACTCG +
Preference number: 6 (lower is better)
Translates to: WYFSSPATITSP*VICSEHPWQDS
Trigger: CGAGTCCTGCCATGGGTGCTCTGAGCAAATCACCAAGGGACTGGTTATGGTGGCTGGGGAGCTGAAGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000486361.5
ENST00000491052.5
ENST00000538333.3
CDS TCA 72 bp TCTCGTCCAGGGGCACATTTCGGATGGGCGTGCCATTaGTTTCCAAGATCCGGTCTCCGACGTGGATGGAAT +
Preference number: 6 (lower is better)
Translates to: SRPGAHFGWACH*FPRSGLRRGWN
Trigger: ATTCCATCCACGTCGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGAAATGTGCCCCTGGACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS CCA 72 bp GGCGTGCCATTGATTTCCAAGATCCGGTCTCCGACGTaGATGGAATTCTTCACATCTGGGCTCATGCAGCCC +
Preference number: 6 (lower is better)
Translates to: GVPLISKIRSPT*MEFFTSGLMQP
Trigger: GGGCTGCATGAGCCCAGATGTGAAGAATTCCATCCACGTCGGAGACCGGATCTTGGAAATCAATGGCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS CCA 72 bp GTAATCCAACCTGAGGAAGATCCCATGGTCTCAGGGTaGTACAGAAATGGGGCTGGAGGCCAGGACTGGATC +
Preference number: 6 (lower is better)
Translates to: VIQPEEDPMVSG*YRNGAGGQDWI
Trigger: GATCCAGTCCTGGCCTCCAGCCCCATTTCTGTACCACCCTGAGACCATGGGATCTTCCTCAGGTTGGATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS CAA 72 bp ATCTCGTCCAGGGGCACATTTCGGATGGGCGTGCCATaGATTTCCAAGATCCGGTCTCCGACGTGGATGGAA +
Preference number: 6 (lower is better)
Translates to: ISSRGTFRMGVP*ISKIRSPTWME
Trigger: TTCCATCCACGTCGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGAAATGTGCCCCTGGACGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS CAA 72 bp TTGAGTGCACTTGGCTTCCCTCCGGTCACCACTTCCTaGATGCCTGTTCTACCAGACACTAGGTCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: LSALGFPPVTTS*MPVLPDTRSAH
Trigger: GTGGGCAGACCTAGTGTCTGGTAGAACAGGCATCAAGGAAGTGGTGACCGGAGGGAAGCCAAGTGCACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486361.5
CDS CAA 72 bp ACCATGCTCTTGATGATGCCCCGGAGCGTGCCGCCCTaGATGTACTCAGTGATGAAGTTGAGCCTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: TMLLMMPRSVPP*MYSVMKLSLLS
Trigger: GGACAAGAGGCTCAACTTCATCACTGAGTACATCAAGGGCGGCACGCTCCGGGGCATCATCAAGAGCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS TCA 72 bp AAGCGTCCAAAGGAATTGGGTGGTCCAGTCCAGCACTaGTGGTGGAACGCCCTGCCTAGATGTGGACAATTC +
Preference number: 6 (lower is better)
Translates to: KRPKELGGPVQH*WWNALPRCGQF
Trigger: GAATTGTCCACATCTAGGCAGGGCGTTCCACCATCAGTGCTGGACTGGACCACCCAATTCCTTTGGACGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS GCA 72 bp TGGGTGGTCCAGTCCAGCACTGATGGTGGAACGCCCTaGCTAGATGTGGACAATTCTAGAATGCTGGACATG +
Preference number: 6 (lower is better)
Translates to: WVVQSSTDGGTP*LDVDNSRMLDM
Trigger: CATGTCCAGCATTCTAGAATTGTCCACATCTAGGCAGGGCGTTCCACCATCAGTGCTGGACTGGACCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418310.5
CDS CAA 90 bp AGCAGGTCAATCTCGTCCAGGGGCACATTTCGGATGGGCGTGCCATaGATTTCCAAGATCCGGTCTCCGACGTGGATGGAATTCTTCACA +
Preference number: 6 (lower is better)
Translates to: SRSISSRGTFRMGVP*ISKIRSPTWMEFFT
Trigger: TGTGAAGAATTCCATCCACGTCGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGAAATGTGCCCCTGGACGAGATTGACCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336180.7
ENST00000418310.5
ENST00000435201.5
ENST00000483414.1
ENST00000538333.3
CDS CAA 72 bp GCGCTCCCTCCCACCTGCGGGGGCACTGATGCTGCTTaGTTTCGGAGAGAAGACAGGAATTCTTTTGTTTTT +
Preference number: 6 (lower is better)
Translates to: ALPPTCGGTDAA*FRREDRNSFVF
Trigger: AAAAACAAAAGAATTCCTGTCTTCTCTCCGAAACAAAGCAGCATCAGTGCCCCCGCAGGTGGGAGGGAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476792.1
CDS TCA 72 bp TGCGCTTGGCCTAGCCCAGAGTTTCTAAATTGCACCTaGCAACGGAACCCGTTGTGTCAAGTTACACCTAGC +
Preference number: 6 (lower is better)
Translates to: CAWPSPEFLNCT*QRNPLCQVTPS
Trigger: GCTAGGTGTAACTTGACACAACGGGTTCCGTTGTCAGGTGCAATTTAGAAACTCTGGGCTAGGCCAAGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS TCA 72 bp TTCCTAGCTTTAGATGGAGTCAGTCGCTCCCCTTTTTaGTTAGGAATCAGGGTTCAGAGGGCCTTTGAGACC +
Preference number: 6 (lower is better)
Translates to: FLALDGVSRSPF*LGIRVQRAFET
Trigger: GGTCTCAAAGGCCCTCTGAACCCTGATTCCTAATCAAAAAGGGGAGCGACTGACTCCATCTAAAGCTAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS TCA 72 bp ATAGGGTCCACACCTTGGATACAAGGTAATCCAACCTaGGGAAGATCCCATGGTCTCAGGGTGGTACAGAAA +
Preference number: 6 (lower is better)
Translates to: IGSTPWIQGNPT*GRSHGLRVVQK
Trigger: TTTCTGTACCACCCTGAGACCATGGGATCTTCCTCAGGTTGGATTACCTTGTATCCAAGGTGTGGACCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483414.1
CDS CCA 72 bp TGTGCACCATTGTACCTGGCCTTTCCTAGCTTTAGATaGAGTCAGTCGCTCCCCTTTTTGATTAGGAATCAG +
Preference number: 6 (lower is better)
Translates to: CAPLYLAFPSFR*SQSLPFLIRNQ
Trigger: CTGATTCCTAATCAAAAAGGGGAGCGACTGACTCCATCTAAAGCTAGGAAAGGCCAGGTACAATGGTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483414.1