RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LIMD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136490

Ensembl transcript IDs: ENST00000259006.8, ENST00000578061.5, ENST00000578067.5, ENST00000578297.1, ENST00000578402.5, ENST00000578993.5, ENST00000579329.1, ENST00000579814.1, ENST00000580222.5, ENST00000582055.1, ENST00000583211.5, ENST00000584645.1

Found 589 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAACCAGCCAGGGAACGCGGCAGCTTGCACCCCAGGCACTGAAGTaGAGCGAGGACAGGCGCCATCACCCACTGGCAGCCTGGCCCTCC +
Preference number: 1 (lower is better)
Translates to: GTSQGTRQLAPQALK*SEDRRHHPLAAWPS
Trigger: GGAGGGCCAGGCTGCCAGTGGGTGATGGCGCCTGTCCTCGCTGCACTTCAGTGCCTGGGGTGCAAGCTGCCGCGTTCCCTGGCTGGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 90 bp CAGCTGGAACCAGCCAGGGAACGCGGCAGCTTGCACCCCAGGCACTaGAGTGCAGCGAGGACAGGCGCCATCACCCACTGGCAGCCTGGC +
Preference number: 1 (lower is better)
Translates to: QLEPARERGSLHPRH*SAARTGAITHWQPG
Trigger: GCCAGGCTGCCAGTGGGTGATGGCGCCTGTCCTCGCTGCACTTCAGTGCCTGGGGTGCAAGCTGCCGCGTTCCCTGGCTGGTTCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 90 bp GGGAGGGAGCTAGACAGCTGGAACCAGCCAGGGAACGCGGCAGCTTaGACCCCAGGCACTGAAGTGCAGCGAGGACAGGCGCCATCACCC +
Preference number: 1 (lower is better)
Translates to: GRELDSWNQPGNAAA*TPGTEVQRGQAPSP
Trigger: GGGTGATGGCGCCTGTCCTCGCTGCACTTCAGTGCCTGGGGTGCAAGCTGCCGCGTTCCCTGGCTGGTTCCAGCTGTCTAGCTCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp AGGCTGAACGAAGCAGGAAGCAGGGTGGTGGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGGCTTCCCCCTGCCGGCTCCAGGCCT +
Preference number: 1 (lower is better)
Translates to: RLNEAGSRVVGRPQS*FPNPHRLPPAGSRP
Trigger: AGGCCTGGAGCCGGCAGGGGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTGCTTCGTTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580222.5
3UTR GCA 90 bp CCCTGCCAGTGCCTGAGGCTGCAGCCTGGCGAGTGCTTTTGCTTCTaGTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGG +
Preference number: 1 (lower is better)
Translates to: PCQCLRLQPGECFCF*FSTLVVRDGPKPHW
Trigger: CCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACTCGCCAGGCTGCAGCCTCAGGCACTGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR CCA 90 bp GCACTGAAGTGCAGCGAGGACAGGCGCCATCACCCACTGGCAGCCTaGCCCTCCCGCTCTCAGGCCTCTTCACAATGGGGTGCATATGGT +
Preference number: 1 (lower is better)
Translates to: ALKCSEDRRHHPLAA*PSRSQASSQWGAYG
Trigger: ACCATATGCACCCCATTGTGAAGAGGCCTGAGAGCGGGAGGGCCAGGCTGCCAGTGGGTGATGGCGCCTGTCCTCGCTGCACTTCAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 90 bp CTCCACTGGGGTGGTCCCAACAGGGCTGATTTACCAGGGTGGCACTaGTGGCCCTCACAACCTGAACGTCACCAGTGGCTGAGTTCCCGG +
Preference number: 1 (lower is better)
Translates to: LHWGGPNRADLPGWH*WPSQPERHQWLSSR
Trigger: CCGGGAACTCAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACCCCAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp CACTGGGGTGGTCCCAACAGGGCTGATTTACCAGGGTGGCACTGCTaGCCCTCACAACCTGAACGTCACCAGTGGCTGAGTTCCCGGAGC +
Preference number: 1 (lower is better)
Translates to: HWGGPNRADLPGWHC*PSQPERHQWLSSRS
Trigger: GCTCCGGGAACTCAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp CTCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATaGGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAG +
Preference number: 1 (lower is better)
Translates to: LPVSVAQKQVKGRGR*GDVGATQSPVAVRE
Trigger: CTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR CCA 90 bp TCTCCTCCCCCATGGGCTGCAGGGGCATTTATGATGCCCAACAGGTaGCACTGTCGCGCTCCTTCCTCCCTGTCTCCGTGGCTCAGAAAC +
Preference number: 1 (lower is better)
Translates to: SPPPWAAGAFMMPNR*HCRAPSSLSPWLRN
Trigger: GTTTCTGAGCCACGGAGACAGGGAGGAAGGAGCGCGACAGTGCCACCTGTTGGGCATCATAAATGCCCCTGCAGCCCATGGGGGAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR CCA 90 bp CAGGAGCTCCACTGGGGTGGTCCCAACAGGGCTGATTTACCAGGGTaGCACTGCTGGCCCTCACAACCTGAACGTCACCAGTGGCTGAGT +
Preference number: 1 (lower is better)
Translates to: QELHWGGPNRADLPG*HCWPSQPERHQWLS
Trigger: ACTCAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACCCCAGTGGAGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 90 bp GATCCTTGCCATCTGAGACCTCTGGTGCAGGAAGTTGGCCTGCCCTaGGAGGCTCTGAGGCGCTCACTTCACACTTGGGAGGATCCAGGC +
Preference number: 1 (lower is better)
Translates to: DPCHLRPLVQEVGLP*EALRRSLHTWEDPG
Trigger: GCCTGGATCCTCCCAAGTGTGAAGTGAGCGCCTCAGAGCCTCTCAGGGCAGGCCAACTTCCTGCACCAGAGGTCTCAGATGGCAAGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 90 bp GGAGACATCAGGAAGTTGAATCTGGAGCAGGACAACCCAGACTTCTaGCTGTGTCCCACCGGGGCGCCCTCAGGTCCTCCCAACTTGCCT +
Preference number: 1 (lower is better)
Translates to: GDIRKLNLEQDNPDF*LCPTGAPSGPPNLP
Trigger: AGGCAAGTTGGGAGGACCTGAGGGCGCCCCGGTGGGACACAGGCAGAAGTCTGGGTTGTCCTGCTCCAGATTCAACTTCCTGATGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp AGGCTGAACGAAGCAGGAAGCAGGGTGGTGGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGG +
Preference number: 1 (lower is better)
Translates to: RLNEAGSRVVGRPQS*FPNPHRLREKEEGR
Trigger: CCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTGCTTCGTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
3UTR GCA 90 bp CCCACCGGGGCGCCCTCAGGTCCTCCCAACTTGCCTGGTTTGCTCTaGTGTGAACTCATCCCTCATTGTCCCTGGGTTTTCAGAGAAGCA +
Preference number: 1 (lower is better)
Translates to: PTGAPSGPPNLPGLL*CELIPHCPWVFREA
Trigger: TGCTTCTCTGAAAACCCAGGGACAATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAAGTTGGGAGGACCTGAGGGCGCCCCGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 90 bp TGTGTCCCACCGGGGCGCCCTCAGGTCCTCCCAACTTGCCTGGTTTaGTCTGCTGTGAACTCATCCCTCATTGTCCCTGGGTTTTCAGAG +
Preference number: 1 (lower is better)
Translates to: CVPPGRPQVLPTCLV*SAVNSSLIVPGFSE
Trigger: CTCTGAAAACCCAGGGACAATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAAGTTGGGAGGACCTGAGGGCGCCCCGGTGGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp ATGCCCAACAGGTGGCACTGTCGCGCTCCTTCCTCCCTGTCTCCGTaGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGG +
Preference number: 1 (lower is better)
Translates to: MPNRWHCRAPSSLSP*LRNRLRVEVDGETW
Trigger: CCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGAGGAAGGAGCGCGACAGTGCCACCTGTTGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR TCA 90 bp CGGGGCGCCCTCAGGTCCTCCCAACTTGCCTGGTTTGCTCTGCTGTaGACTCATCCCTCATTGTCCCTGGGTTTTCAGAGAAGCAGAGGT +
Preference number: 1 (lower is better)
Translates to: RGALRSSQLAWFALL*THPSLSLGFQRSRG
Trigger: ACCTCTGCTTCTCTGAAAACCCAGGGACAATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAAGTTGGGAGGACCTGAGGGCGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 90 bp CAGGGTGGCACTGCTGGCCCTCACAACCTGAACGTCACCAGTGGCTaGGTTCCCGGAGCTTTCATGATATTTGGTAGGGTCTTCCTGGCC +
Preference number: 1 (lower is better)
Translates to: QGGTAGPHNLNVTSG*VPGAFMIFGRVFLA
Trigger: GGCCAGGAAGACCCTACCAAATATCATGAAAGCTCCGGGAACTCAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 90 bp CAGCATAGTGACTTATGTGACACTGGAGCCTGTGGCCCAGCTCCCTaGCCTGTTCCACGGGGAGGCCACTTAGGAACTCAGGCAGTTGTA +
Preference number: 1 (lower is better)
Translates to: QHSDLCDTGACGPAP*PVPRGGHLGTQAVV
Trigger: TACAACTGCCTGAGTTCCTAAGTGGCCTCCCCGTGGAACAGGGCAGGGAGCTGGGCCACAGGCTCCAGTGTCACATAAGTCACTATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 90 bp CCATCTCTGCTGAGTATTCGCTCTGCTCCCTCGAGGAGCAGTGCCTaGCTCAGCATAGTGACTTATGTGACACTGGAGCCTGTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: PSLLSIRSAPSRSSA*LSIVTYVTLEPVAQ
Trigger: CTGGGCCACAGGCTCCAGTGTCACATAAGTCACTATGCTGAGGCAGGCACTGCTCCTCGAGGGAGCAGAGCGAATACTCAGCAGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp CAGCATGAAGCCCTCGCTGTGAAGAGGAGCCCTCCCATTTCTCAATaGTGTGTCAGGGAACTGACACCCACTTCTAGCTCCCTGCCCCCA +
Preference number: 1 (lower is better)
Translates to: QHEALAVKRSPPISQ*CVRELTPTSSSLPP
Trigger: TGGGGGCAGGGAGCTAGAAGTGGGTGTCAGTTCCCTGACACACCATTGAGAAATGGGAGGGCTCCTCTTCACAGCGAGGGCTTCATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp TGCCCTGTTCCACGGGGAGGCCACTTAGGAACTCAGGCAGTTGTATaGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGA +
Preference number: 1 (lower is better)
Translates to: CPVPRGGHLGTQAVV*CGGSKPSRSLCSHR
Trigger: TCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGTTCCTAAGTGGCCTCCCCGTGGAACAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp TCCACGGGGAGGCCACTTAGGAACTCAGGCAGTTGTATGGTGTGGTaGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGT +
Preference number: 1 (lower is better)
Translates to: STGRPLRNSGSCMVW*QQTLQESLFSSIPC
Trigger: ACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGTTCCTAAGTGGCCTCCCCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp TGTTCCACGGGGAGGCCACTTAGGAACTCAGGCAGTTGTATGGTGTaGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCA +
Preference number: 1 (lower is better)
Translates to: CSTGRPLRNSGSCMV*WQQTLQESLFSSIP
Trigger: TGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGTTCCTAAGTGGCCTCCCCGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 90 bp ATGGTGCCTGGCAACGAGCCTGGGCCTTTCAAGCAGAAGAGAACTTaGCTCCAAGTAGAGGGGTCCTGGGGTGATCTGGCTGATACCATT +
Preference number: 1 (lower is better)
Translates to: MVPGNEPGPFKQKRT*LQVEGSWGDLADTI
Trigger: AATGGTATCAGCCAGATCACCCCAGGACCCCTCTACTTGGAGTCAAGTTCTCTTCTGCTTGAAAGGCCCAGGCTCGTTGCCAGGCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 90 bp GTGAGGTGGAGTTTCAGTTCCAAAACCACTGTGGGTGTGACAGCATaGAGCCCTCGCTGTGAAGAGGAGCCCTCCCATTTCTCAATGGTG +
Preference number: 1 (lower is better)
Translates to: VRWSFSSKTTVGVTA*SPRCEEEPSHFSMV
Trigger: CACCATTGAGAAATGGGAGGGCTCCTCTTCACAGCGAGGGCTTCATGCTGTCACACCCACAGTGGTTTTGGAACTGAAACTCCACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 90 bp GAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGGAAGTTaGATCTGGAGCAGGACAACCCAGACTTCTGCCTGTGTCCCACCG +
Preference number: 1 (lower is better)
Translates to: ESLFSSIPCLETSGS*IWSRTTQTSACVPP
Trigger: CGGTGGGACACAGGCAGAAGTCTGGGTTGTCCTGCTCCAGATTCAACTTCCTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 90 bp TACCCCCTTGTGGTCATCTGCTACTGTTGCTTAACCGAACCAAGATaGTCCTTGCCATCTGAGACCTCTGGTGCAGGAAGTTGGCCTGCC +
Preference number: 1 (lower is better)
Translates to: YPLVVICYCCLTEPR*SLPSETSGAGSWPA
Trigger: GGCAGGCCAACTTCCTGCACCAGAGGTCTCAGATGGCAAGGATCATCTTGGTTCGGTTAAGCAACAGTAGCAGATGACCACAAGGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 90 bp CTCAGGCCTCTTCACAATGGGGTGCATATGGTAAGTTGGTGGGTCTaGACCAACCCAGAACTGAGGGGTGAGGTGGAGTTTCAGTTCCAA +
Preference number: 1 (lower is better)
Translates to: LRPLHNGVHMVSWWV*TNPELRGEVEFQFQ
Trigger: TTGGAACTGAAACTCCACCTCACCCCTCAGTTCTGGGTTGGTTCAGACCCACCAACTTACCATATGCACCCCATTGTGAAGAGGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 90 bp GACAATCCAGGGGTCACTAAAACCTTGGGCAGCACTTGCTGGGTCTaGTGGTTACCGCCATTCTTCGCTAACTTACTTCCAGGTCAAAGG +
Preference number: 1 (lower is better)
Translates to: DNPGVTKTLGSTCWV*WLPPFFANLLPGQR
Trigger: CCTTTGACCTGGAAGTAAGTTAGCGAAGAATGGCGGTAACCAGCAGACCCAGCAAGTGCTGCCCAAGGTTTTAGTGACCCCTGGATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp AATCCAGGGGTCACTAAAACCTTGGGCAGCACTTGCTGGGTCTGCTaGTTACCGCCATTCTTCGCTAACTTACTTCCAGGTCAAAGGGCT +
Preference number: 1 (lower is better)
Translates to: NPGVTKTLGSTCWVC*LPPFFANLLPGQRA
Trigger: AGCCCTTTGACCTGGAAGTAAGTTAGCGAAGAATGGCGGTAACCAGCAGACCCAGCAAGTGCTGCCCAAGGTTTTAGTGACCCCTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 90 bp GGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTaGAGACATCAGGAAGTTGAATCTGGAGCAGGACAACCCAGACTT +
Preference number: 1 (lower is better)
Translates to: GSKPSRSLCSHRSHV*RHQEVESGAGQPRL
Trigger: AAGTCTGGGTTGTCCTGCTCCAGATTCAACTTCCTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGCCTCCCAGGGGGTCCTaGGGTGAGGTGGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: DVGATQSPVAVRELGTLRPPRGS*GEVGRE
Trigger: CTCCCTCCCCACCTCACCCCAGGACCCCCTGGGAGG...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR GCA 90 bp GGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTCCTGGAGCAGAGCCCTaGCCTGGTCCCCTACGCCTG +
Preference number: 2 (lower is better)
Translates to: GRRGGHTVSGGSEGAWDPPGAEP*PGPLRL
Trigger: CAGGCGTAGGGGACCAGGGCAGGGCTCTGCTCCAGG...AGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR TCA 90 bp CGCCCCATGGTGAGTCTGCACCCTTCCTGTGACAGATCCCCCAGCAGGCCACACGCCCCTGCCAGTGCCTaGGGCTGCAGCCTGGCGAGT +
Preference number: 2 (lower is better)
Translates to: RPMVSLHPSCDRSPSRPHAPASA*GCSLAS
Trigger: ACTCGCCAGGCTGCAGCCTCAGGCACTGGCAGGGGC...GTGTGGCCTGCTGGGGGATCTGTCACAGGAAGGGTGCAGACTCACCATGGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp CGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGGGCAGGAAGCAGGGTGGTaGGCAGACCCCAATCCTGGT +
Preference number: 2 (lower is better)
Translates to: RGGHTVSGGSEGAWDPEGQEAGW*ADPNPG
Trigger: ACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTG...CCCCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGCAGGAAGCAGGGTGGTaGGCAGACCCCAATCCTGGT +
Preference number: 2 (lower is better)
Translates to: DVGATQSPVAVRELGTLRQEAGW*ADPNPG
Trigger: ACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTG...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR GCA 90 bp TCCACTGGGGTGGTCCCAACAGGGCTGATTTACCAGGGTGGCACTGCTGGCCCTCCACTTCTAGCTCCCTaGCCCCATCAGGGCCGAGGT +
Preference number: 2 (lower is better)
Translates to: STGVVPTGLIYQGGTAGPPLLAP*PHQGRG
Trigger: ACCTCGGCCCTGATGGGGGCAGGGAGCTAGAAGTGG...AGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACCCCAGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR GCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTTCACCGGCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 2 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLSPASP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGCCGGTGA...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580222.5
3UTR-3UTR CCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAGCAGAGCCCTGCCCTaGTCCCCTACGCCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRSRALP*SPTPEQ
Trigger: TTGCTCAGGCGTAGGGGACCAGGGCAGGGCTCTGCT...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp TGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACCCTCCCAGGGGGTCCTaGGGTGAGGTGGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: CFCFCFSTLVVRDGPKPHPPRGS*GEVGRE
Trigger: CTCCCTCCCCACCTCACCCCAGGACCCCCTGGGAGG...GTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR TCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGACTGGTCCCCTACGCCTaGGCAAGCCTCATCCCCTTC +
Preference number: 2 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRLVPYA*ASLIPF
Trigger: GAAGGGGATGAGGCTTGCTCAGGCGTAGGGGACCAG...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
3UTR-3UTR TCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGCTGGTCCCCTACGCCTaGGCAAGCCTCATCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGLVPYA*ASLIPF
Trigger: GAAGGGGATGAGGCTTGCTCAGGCGTAGGGGACCAG...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR GCA 90 bp GACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAATTCCCACCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 2 (lower is better)
Translates to: DPNPGFQTLTGCGRRKKEFPPSP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGGTGGGAA...TTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
3UTR-3UTR GCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCTTCCCACCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 2 (lower is better)
Translates to: SAFASASPRWWFEMVPSPFPPSP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGGTGGGAA...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR GCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTTTCCCACCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 2 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPFPPSP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGGTGGGAA...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAGCAGAGCCCTGCCCTaGTCCCCTACGCCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKSRALP*SPTPEQ
Trigger: TTGCTCAGGCGTAGGGGACCAGGGCAGGGCTCTGCT...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCAGAGCCCTGCCCTaGTCCCCTACGCCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRSRALP*SPTPEQ
Trigger: TTGCTCAGGCGTAGGGGACCAGGGCAGGGCTCTGCT...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
3UTR CAA 90 bp GACTTCTGCCTGTGTCCCACCGGGGCGCCCTCAGGTCCTCCCAACTaGCCTGGTTTGCTCTGCTGTGAACTCATCCCTCATTGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: DFCLCPTGAPSGPPN*PGLLCCELIPHCPW
Trigger: CCAGGGACAATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAAGTTGGGAGGACCTGAGGGCGCCCCGGTGGGACACAGGCAGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR GCA 90 bp GTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACTTCCCACCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 2 (lower is better)
Translates to: VAANPPGVSVLIDPMSGDFPPSP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGGTGGGAA...GTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp AGGGGTCCTGGGGTGATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCAGCAGAGCCCTGCCCTaGTCCCCTACGCCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: RGPGVIWLIPLSVQRCLPSRALP*SPTPEQ
Trigger: TTGCTCAGGCGTAGGGGACCAGGGCAGGGCTCTGCT...GGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGATCACCCCAGGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp GATTTACCAGGGTGGCACTGCTGGCCCTCACAACCTGAACGTCACCAGTGGCTGCAGGATGGGCACAAATaGGAGCGGGGGAGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: DLPGWHCWPSQPERHQWLQDGHK*ERGRGV
Trigger: CACTCCCCTCCCCCGCTCCCATTTGTGCCCATCCTG...CAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR TCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGCTGGTCCCCTACGCCTaGGCAAGCCTCATCCCCTTC +
Preference number: 2 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKLVPYA*ASLIPF
Trigger: GAAGGGGATGAGGCTTGCTCAGGCGTAGGGGACCAG...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp GTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCAAGCAGAGCCCTGCCCTaGTCCCCTACGCCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: VLLLLLLHAGGSRWSQAPSRALP*SPTPEQ
Trigger: TTGCTCAGGCGTAGGGGACCAGGGCAGGGCTCTGCT...TGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp GTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACCTGCAGAGGCAGGGTaGCTCCACTTCCCCATCTCC +
Preference number: 2 (lower is better)
Translates to: VLLLLLLHAGGSRWSQAPPAEAG*LHFPIS
Trigger: GGAGATGGGGAAGTGGAGCCACCCTGCCTCTGCAGG...TGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp AGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGGGCGCCATCACCCACTaGCAGCCTGGCCCTCCCGCT +
Preference number: 2 (lower is better)
Translates to: SKPSRSLCSHRSHVWRHQGAITH*QPGPPA
Trigger: AGCGGGAGGGCCAGGCTGCCAGTGGGTGATGGCGCC...CTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CAA 90 bp CTGTGTCCCACCGGGGCGCCCTCAGGTCCTCCCAACTTGCCTGGTTaGCTCTGCTGTGAACTCATCCCTCATTGTCCCTGGGTTTTCAGA +
Preference number: 2 (lower is better)
Translates to: LCPTGAPSGPPNLPG*LCCELIPHCPWVFR
Trigger: TCTGAAAACCCAGGGACAATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAAGTTGGGAGGACCTGAGGGCGCCCCGGTGGGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR TCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGCTGGTCCCCTACGCCTaGGCAAGCCTCATCCCCTTC +
Preference number: 2 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETLVPYA*ASLIPF
Trigger: GAAGGGGATGAGGCTTGCTCAGGCGTAGGGGACCAG...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR GCA 90 bp TCACAATGGGGTGCATATGGTAAGTTGGTGGGTCTGAACCAACCCAGAACTGAGGGGCAGGCCCTGCCTTaGCCTGCAGAGGCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: SQWGAYGKLVGLNQPRTEGQALP*PAEAGW
Trigger: CCACCCTGCCTCTGCAGGGCAAGGCAGGGCCTGCCC...CTCAGTTCTGGGTTGGTTCAGACCCACCAACTTACCATATGCACCCCATTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp GATTTACCAGGGTGGCACTGCTGGCCCTCACAACCTGAACGTCACCAGTGGCTGCCATCTCCTCCCCCATaGGCTGCAGGGGCATTTATG +
Preference number: 2 (lower is better)
Translates to: DLPGWHCWPSQPERHQWLPSPPP*AAGAFM
Trigger: CATAAATGCCCCTGCAGCCCATGGGGGAGGAGATGG...CAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp CTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCCCCTCCGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGG +
Preference number: 2 (lower is better)
Translates to: LIPLSVQRCLPLSSSCPSGRPQS*FPNPHR
Trigger: CCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC...GGAGGGGCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp GTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCAGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGG +
Preference number: 2 (lower is better)
Translates to: VLLLLLLHAGGSRWSQAPGRPQS*FPNPHR
Trigger: CCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC...TGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp GTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCAAAGGGTAGAGGTAGATaGGGAGACGTGGGGGCCACA +
Preference number: 2 (lower is better)
Translates to: VLLLLLLHAGGSRWSQAPKGRGR*GDVGAT
Trigger: TGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTT...TGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGTCCTCCCTGTCTCCGTaGCTCAGAAACAGGTTAAGG +
Preference number: 2 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGSSLSP*LRNRLR
Trigger: CCTTAACCTGTTTCTGAGCCACGGAGACAGGGAGGA...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp GTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCAATGATGCCCAACAGGTaGCACTGTCGCGCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: VLLLLLLHAGGSRWSQAPMMPNR*HCRAPS
Trigger: GGAAGGAGCGCGACAGTGCCACCTGTTGGGCATCAT...TGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp ATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCCCTGCAGAGGCAGGGTaGCTCCACTTCCCCATCTCC +
Preference number: 2 (lower is better)
Translates to: IWLIPLSVQRCLPLSSSCPAEAG*LHFPIS
Trigger: GGAGATGGGGAAGTGGAGCCACCCTGCCTCTGCAGG...GCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp AGAGCCACCTCTCCAGTACCCCCTTGTGGTCATCTGCTACTGTTGCTTAACCGAGCTGGTGGTTCGAGATaGTCCCAAGCCCCACTGGGG +
Preference number: 2 (lower is better)
Translates to: RATSPVPPCGHLLLLLNRAGGSR*SQAPLG
Trigger: CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGC...TCGGTTAAGCAACAGTAGCAGATGACCACAAGGGGGTACTGGAGAGGTGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR TCA 90 bp AGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGATGCCCGCCCCATGGTaGGTCTGCACCCTTCCTGTG +
Preference number: 2 (lower is better)
Translates to: SKPSRSLCSHRSHVWRHQMPAPW*VCTLPV
Trigger: CACAGGAAGGGTGCAGACTCACCATGGGGCGGGCAT...CTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp AGAGCCACCTCTCCAGTACCCCCTTGTGGTCATCTGCTACTGTTGCTTAACCGACAGGAAGCAGGGTGGTaGGCAGACCCCAATCCTGGT +
Preference number: 2 (lower is better)
Translates to: RATSPVPPCGHLLLLLNRQEAGW*ADPNPG
Trigger: ACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTG...TCGGTTAAGCAACAGTAGCAGATGACCACAAGGGGGTACTGGAGAGGTGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGAAGCAGGAAGCAGGGTaGTGGGCAGACCCCAATCCT +
Preference number: 2 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETKQEAG*WADPNP
Trigger: AGGATTGGGGTCTGCCCACCACCCTGCTTCCTGCTT...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR-3UTR CCA 90 bp ATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCCCAGGGTGGCACTGCTaGCCCTCACAACCTGAACGT +
Preference number: 2 (lower is better)
Translates to: IWLIPLSVQRCLPLSSSCPGWHC*PSQPER
Trigger: ACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGG...GCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp ACTCAGGCAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTATGATGCCCAACAGGTaGCACTGTCGCGCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: TQAVVWCGGSKPSRSLCSMMPNR*HCRAPS
Trigger: GGAAGGAGCGCGACAGTGCCACCTGTTGGGCATCAT...AGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR TCA 90 bp ATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCATGAAGCCCTCGCTGTaGAGAGGAGCCCTCCCATTT +
Preference number: 2 (lower is better)
Translates to: IWLIPLSVQRCLPLSSSCMKPSL*RGALPF
Trigger: AAATGGGAGGGCTCCTCTTCACAGCGAGGGCTTCAT...GCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR GCA 90 bp GTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACAGCACTTGCTGGGTCTaGTGGTTACCGCCATTCTTC +
Preference number: 2 (lower is better)
Translates to: VAANPPGVSVLIDPMSGDSTCWV*WLPPFF
Trigger: GAAGAATGGCGGTAACCAGCAGACCCAGCAAGTGCT...GTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp GATTTACCAGGGTGGCACTGCTGGCCCTCACAACCTGAACGTCACCAGTGGCTGCAGGCCTCTTCACAATaGGGTGCATATGGTAAGTTG +
Preference number: 2 (lower is better)
Translates to: DLPGWHCWPSQPERHQWLQASSQ*GAYGKL
Trigger: CAACTTACCATATGCACCCCATTGTGAAGAGGCCTG...CAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CAA 90 bp GGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGGAAGTaGAATCTGGAGCAGGACAACCCAGACTTCTGCCTGTGTCCCACC +
Preference number: 2 (lower is better)
Translates to: GVSVLIDPMSGDIRK*NLEQDNPDFCLCPT
Trigger: GGTGGGACACAGGCAGAAGTCTGGGTTGTCCTGCTCCAGATTCAACTTCCTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp TTAGGAACTCAGGCAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTCCTCCCTGTCTCCGTaGCTCAGAAACAGGTTAAGG +
Preference number: 2 (lower is better)
Translates to: LGTQAVVWCGGSKPSRSLSSLSP*LRNRLR
Trigger: CCTTAACCTGTTTCTGAGCCACGGAGACAGGGAGGA...GAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGTTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp AGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGTCTGCTTCTCCACGCTaGTGGTTCGAGATGGTCCCA +
Preference number: 2 (lower is better)
Translates to: SKPSRSLCSHRSHVWRHQSASPR*WFEMVP
Trigger: TGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGA...CTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp CTGAATTGTGGATCGTGCAGCCATGGTTATTGTGGAACTGTGGAACCTGCAGCCACTTGCTGGGTCTGCTaGTTACCGCCATTCTTCGCT +
Preference number: 2 (lower is better)
Translates to: LNCGSCSHGYCGTVEPAATCWVC*LPPFFA
Trigger: AGCGAAGAATGGCGGTAACCAGCAGACCCAGCAAGT...GGCTGCAGGTTCCACAGTTCCACAATAACCATGGCTGCACGATCCACAATTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CCA 90 bp ACAATAAAAGGGATCATTTATATCAGAGGGGTCCTGTGGCAGTGCTTTCAGTTGGTAGATGGGGAGACGTaGGGGCCACACAGTCTCCGG +
Preference number: 2 (lower is better)
Translates to: TIKGIIYIRGVLWQCFQLVDGET*GPHSLR
Trigger: CCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTAC...CAACTGAAAGCACTGCCACAGGACCCCTCTGATATAAATGATCCCTTTTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR GCA 90 bp ACAATAAAAGGGATCATTTATATCAGAGGGGTCCTGTGGCAGTGCTTTCAGTTGGCTGAGTATTCGCTCTaGTCCCTCGAGGAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: TIKGIIYIRGVLWQCFQLAEYSL*SLEEQC
Trigger: GCACTGCTCCTCGAGGGAGCAGAGCGAATACTCAGC...CAACTGAAAGCACTGCCACAGGACCCCTCTGATATAAATGATCCCTTTTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR GCA 90 bp GGATCTATTGAAACATGTTTAAAACGGGGTTGGTCACAACAGGATGGGCACAAACCTGGCGAGTGCTTTTaGTTCTGCTTCTCCACGCTG +
Preference number: 2 (lower is better)
Translates to: GSIETCLKRGWSQQDGHKPGECF*FCFSTL
Trigger: CAGCGTGGAGAAGCAGAAGCAAAAGCACTCGCCAGG...TTTGTGCCCATCCTGTTGTGACCAACCCCGTTTTAAACATGTTTCAATAGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000578402.5
3UTR-3UTR GCA 90 bp GGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGGAAGTTGAATCTGTTGCCTGGTTTGCTCTaGTGTGAACTCATCCCTCAT +
Preference number: 2 (lower is better)
Translates to: GVSVLIDPMSGDIRKLNLLPGLL*CELIPH
Trigger: ATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAA...CAGATTCAACTTCCTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR GCA 90 bp GGATCTATTGAAACATGTTTAAAACGGGGTTGGTCACAACAGGATGGGCACAAAGAGTGCTTTTGCTTCTaGTTCTCCACGCTGGTGGTT +
Preference number: 2 (lower is better)
Translates to: GSIETCLKRGWSQQDGHKECFCF*FSTLVV
Trigger: AACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACTC...TTTGTGCCCATCCTGTTGTGACCAACCCCGTTTTAAACATGTTTCAATAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000578402.5
3UTR-3UTR TCA 90 bp ACAATAAAAGGGATCATTTATATCAGAGGGGTCCTGTGGCAGTGCTTTCAGTTGTTCCCGGAGCTTTCATaGTATTTGGTAGGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: TIKGIIYIRGVLWQCFQLFPELS*YLVGSS
Trigger: GGAAGACCCTACCAAATATCATGAAAGCTCCGGGAA...CAACTGAAAGCACTGCCACAGGACCCCTCTGATATAAATGATCCCTTTTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 72 bp CCAGCCAGGGAACGCGGCAGCTTGCACCCCAGGCACTaGAGTGCAGCGAGGACAGGCGCCATCACCCACTGG +
Preference number: 3 (lower is better)
Translates to: PARERGSLHPRH*SAARTGAITHW
Trigger: CCAGTGGGTGATGGCGCCTGTCCTCGCTGCACTTCAGTGCCTGGGGTGCAAGCTGCCGCGTTCCCTGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp TGCAGCGAGGACAGGCGCCATCACCCACTGGCAGCCTaGCCCTCCCGCTCTCAGGCCTCTTCACAATGGGGT +
Preference number: 3 (lower is better)
Translates to: CSEDRRHHPLAA*PSRSQASSQWG
Trigger: ACCCCATTGTGAAGAGGCCTGAGAGCGGGAGGGCCAGGCTGCCAGTGGGTGATGGCGCCTGTCCTCGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 72 bp CTAGACAGCTGGAACCAGCCAGGGAACGCGGCAGCTTaGACCCCAGGCACTGAAGTGCAGCGAGGACAGGCG +
Preference number: 3 (lower is better)
Translates to: LDSWNQPGNAAA*TPGTEVQRGQA
Trigger: CGCCTGTCCTCGCTGCACTTCAGTGCCTGGGGTGCAAGCTGCCGCGTTCCCTGGCTGGTTCCAGCTGTCTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 72 bp CCTCCAGGAGCTCCACTGGGGTGGTCCCAACAGGGCTaGTTTACCAGGGTGGCACTGCTGGCCCTCACAACC +
Preference number: 3 (lower is better)
Translates to: PPGAPLGWSQQG*FTRVALLALTT
Trigger: GGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACCCCAGTGGAGCTCCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 72 bp CCGGGGCGCCCTCAGGTCCTCCCAACTTGCCTGGTTTaGTCTGCTGTGAACTCATCCCTCATTGTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: PGRPQVLPTCLV*SAVNSSLIVPG
Trigger: CCCAGGGACAATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAAGTTGGGAGGACCTGAGGGCGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 72 bp AGGAAGTTGAATCTGGAGCAGGACAACCCAGACTTCTaGCTGTGTCCCACCGGGGCGCCCTCAGGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: RKLNLEQDNPDF*LCPTGAPSGPP
Trigger: GGGAGGACCTGAGGGCGCCCCGGTGGGACACAGGCAGAAGTCTGGGTTGTCCTGCTCCAGATTCAACTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp CCATGGGCTGCAGGGGCATTTATGATGCCCAACAGGTaGCACTGTCGCGCTCCTTCCTCCCTGTCTCCGTGG +
Preference number: 3 (lower is better)
Translates to: PWAAGAFMMPNR*HCRAPSSLSPW
Trigger: CCACGGAGACAGGGAGGAAGGAGCGCGACAGTGCCACCTGTTGGGCATCATAAATGCCCCTGCAGCCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR GCA 72 bp GGTGGTCCCAACAGGGCTGATTTACCAGGGTGGCACTaGTGGCCCTCACAACCTGAACGTCACCAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: GGPNRADLPGWH*WPSQPERHQWL
Trigger: CAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp CACTGGGGTGGTCCCAACAGGGCTGATTTACCAGGGTaGCACTGCTGGCCCTCACAACCTGAACGTCACCAG +
Preference number: 3 (lower is better)
Translates to: HWGGPNRADLPG*HCWPSQPERHQ
Trigger: CTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 72 bp GGAGCCCTCCCATTTCTCAATGGTGTGTCAGGGAACTaGCACCCACTTCTAGCTCCCTGCCCCCATCAGGGC +
Preference number: 3 (lower is better)
Translates to: GALPFLNGVSGN*HPLLAPCPHQG
Trigger: GCCCTGATGGGGGCAGGGAGCTAGAAGTGGGTGTCAGTTCCCTGACACACCATTGAGAAATGGGAGGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 72 bp TGCCTGAGGCTGCAGCCTGGCGAGTGCTTTTGCTTCTaGTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAG +
Preference number: 3 (lower is better)
Translates to: CLRLQPGECFCF*FSTLVVRDGPK
Trigger: CTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACTCGCCAGGCTGCAGCCTCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR GCA 72 bp CTTCCTGGCCCAGAGGACTTCCTTCAGTCCCATCTTTaGAGGGCAGGGGTCAGGTGTCTCCAAGAGCCACCT +
Preference number: 3 (lower is better)
Translates to: LPGPEDFLQSHL*RAGVRCLQEPP
Trigger: AGGTGGCTCTTGGAGACACCTGACCCCTGCCCTGCAAAGATGGGACTGAAGGAAGTCCTCTGGGCCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp TCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATaGGGAGACGTGGGGGCCACACAGTCTCCGGTGGCA +
Preference number: 3 (lower is better)
Translates to: SVAQKQVKGRGR*GDVGATQSPVA
Trigger: TGCCACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR CCA 72 bp GGTCCCAACAGGGCTGATTTACCAGGGTGGCACTGCTaGCCCTCACAACCTGAACGTCACCAGTGGCTGAGT +
Preference number: 3 (lower is better)
Translates to: GPNRADLPGWHC*PSQPERHQWLS
Trigger: ACTCAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CAA 90 bp AGGGGTCCTGGGGTGATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCGGGCATGCTGACTCCTaGCTGGAGAAAAGGCACCTA +
Preference number: 3 (lower is better)
Translates to: RGPGVIWLIPLSVQRCLPGHADS*LEKRHL
Trigger: TAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC...GGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGATCACCCCAGGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CAA 90 bp CTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCCCCTCCGGGGTCACTAAAACCTaGGGCAGCACTTGCTGGGTC +
Preference number: 3 (lower is better)
Translates to: LIPLSVQRCLPLSSSCPSGVTKT*GSTCWV
Trigger: GACCCAGCAAGTGCTGCCCAAGGTTTTAGTGACCCC...GGAGGGGCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp AGGTGGCACTGTCGCGCTCCTTCCTCCCTGTCTCCGTaGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGG +
Preference number: 3 (lower is better)
Translates to: RWHCRAPSSLSP*LRNRLRVEVDG
Trigger: CCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGAGGAAGGAGCGCGACAGTGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR CCA 72 bp GCAGCCTGGCCCTCCCGCTCTCAGGCCTCTTCACAATaGGGTGCATATGGTAAGTTGGTGGGTCTGAACCAA +
Preference number: 3 (lower is better)
Translates to: AAWPSRSQASSQ*GAYGKLVGLNQ
Trigger: TTGGTTCAGACCCACCAACTTACCATATGCACCCCATTGTGAAGAGGCCTGAGAGCGGGAGGGCCAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp CCACGGGGAGGCCACTTAGGAACTCAGGCAGTTGTATaGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: PRGGHLGTQAVV*CGGSKPSRSLC
Trigger: ACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGTTCCTAAGTGGCCTCCCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 72 bp GCGCCCTCAGGTCCTCCCAACTTGCCTGGTTTGCTCTaGTGTGAACTCATCCCTCATTGTCCCTGGGTTTTC +
Preference number: 3 (lower is better)
Translates to: APSGPPNLPGLL*CELIPHCPWVF
Trigger: GAAAACCCAGGGACAATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAAGTTGGGAGGACCTGAGGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp GCCCTCGCTGTGAAGAGGAGCCCTCCCATTTCTCAATaGTGTGTCAGGGAACTGACACCCACTTCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: ALAVKRSPPISQ*CVRELTPTSSS
Trigger: GGAGCTAGAAGTGGGTGTCAGTTCCCTGACACACCATTGAGAAATGGGAGGGCTCCTCTTCACAGCGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CAA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGGGGCATGCTGACTCCTaGCTGGAGAAAAGGCACCTA +
Preference number: 3 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETGHADS*LEKRHL
Trigger: TAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
3UTR GCA 72 bp CTGAGTATTCGCTCTGCTCCCTCGAGGAGCAGTGCCTaGCTCAGCATAGTGACTTATGTGACACTGGAGCCT +
Preference number: 3 (lower is better)
Translates to: LSIRSAPSRSSA*LSIVTYVTLEP
Trigger: AGGCTCCAGTGTCACATAAGTCACTATGCTGAGGCAGGCACTGCTCCTCGAGGGAGCAGAGCGAATACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp GGGAGGCCACTTAGGAACTCAGGCAGTTGTATGGTGTaGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCA +
Preference number: 3 (lower is better)
Translates to: GRPLRNSGSCMV*WQQTLQESLFS
Trigger: TGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGTTCCTAAGTGGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 72 bp CTGTTGCTTAACCGAACCAAGATGATCCTTGCCATCTaGGACCTCTGGTGCAGGAAGTTGGCCTGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: LLLNRTKMILAI*DLWCRKLACPE
Trigger: CTCAGGGCAGGCCAACTTCCTGCACCAGAGGTCTCAGATGGCAAGGATCATCTTGGTTCGGTTAAGCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 72 bp ACTGCTGGCCCTCACAACCTGAACGTCACCAGTGGCTaGGTTCCCGGAGCTTTCATGATATTTGGTAGGGTC +
Preference number: 3 (lower is better)
Translates to: TAGPHNLNVTSG*VPGAFMIFGRV
Trigger: GACCCTACCAAATATCATGAAAGCTCCGGGAACTCAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp AGGCCACTTAGGAACTCAGGCAGTTGTATGGTGTGGTaGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCG +
Preference number: 3 (lower is better)
Translates to: RPLRNSGSCMVW*QQTLQESLFSS
Trigger: CGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGTTCCTAAGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 72 bp AGTTTCAGTTCCAAAACCACTGTGGGTGTGACAGCATaGAGCCCTCGCTGTGAAGAGGAGCCCTCCCATTTC +
Preference number: 3 (lower is better)
Translates to: SFSSKTTVGVTA*SPRCEEEPSHF
Trigger: GAAATGGGAGGGCTCCTCTTCACAGCGAGGGCTTCATGCTGTCACACCCACAGTGGTTTTGGAACTGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 72 bp AAGTTGGTGGGTCTGAACCAACCCAGAACTGAGGGGTaGGGTGGAGTTTCAGTTCCAAAACCACTGTGGGTG +
Preference number: 3 (lower is better)
Translates to: KLVGLNQPRTEG*GGVSVPKPLWV
Trigger: CACCCACAGTGGTTTTGGAACTGAAACTCCACCTCACCCCTCAGTTCTGGGTTGGTTCAGACCCACCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR GCA 72 bp GGGGTCACTAAAACCTTGGGCAGCACTTGCTGGGTCTaGTGGTTACCGCCATTCTTCGCTAACTTACTTCCA +
Preference number: 3 (lower is better)
Translates to: GVTKTLGSTCWV*WLPPFFANLLP
Trigger: TGGAAGTAAGTTAGCGAAGAATGGCGGTAACCAGCAGACCCAGCAAGTGCTGCCCAAGGTTTTAGTGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CAA 90 bp CAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATGGTGCATATGGTAAGTaGGTGGGTCTGAACCAACCC +
Preference number: 3 (lower is better)
Translates to: QLYGVVAANPPGVSVLIDGAYGK*VGLNQP
Trigger: GGGTTGGTTCAGACCCACCAACTTACCATATGCACC...ATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 72 bp CTTCACAATGGGGTGCATATGGTAAGTTGGTGGGTCTaGACCAACCCAGAACTGAGGGGTGAGGTGGAGTTT +
Preference number: 3 (lower is better)
Translates to: LHNGVHMVSWWV*TNPELRGEVEF
Trigger: AAACTCCACCTCACCCCTCAGTTCTGGGTTGGTTCAGACCCACCAACTTACCATATGCACCCCATTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp GTCACTAAAACCTTGGGCAGCACTTGCTGGGTCTGCTaGTTACCGCCATTCTTCGCTAACTTACTTCCAGGT +
Preference number: 3 (lower is better)
Translates to: VTKTLGSTCWVC*LPPFFANLLPG
Trigger: ACCTGGAAGTAAGTTAGCGAAGAATGGCGGTAACCAGCAGACCCAGCAAGTGCTGCCCAAGGTTTTAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp AATCCAGGGGTCACTAAAACCTTGGGCAGCACTTGCTaGGTCTGCTGGTTACCGCCATTCTTCGCTAACTTA +
Preference number: 3 (lower is better)
Translates to: NPGVTKTLGSTC*VCWLPPFFANL
Trigger: TAAGTTAGCGAAGAATGGCGGTAACCAGCAGACCCAGCAAGTGCTGCCCAAGGTTTTAGTGACCCCTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR TCA 72 bp GTGGTCATCTGCTACTGTTGCTTAACCGAACCAAGATaGTCCTTGCCATCTGAGACCTCTGGTGCAGGAAGT +
Preference number: 3 (lower is better)
Translates to: VVICYCCLTEPR*SLPSETSGAGS
Trigger: ACTTCCTGCACCAGAGGTCTCAGATGGCAAGGATCATCTTGGTTCGGTTAAGCAACAGTAGCAGATGACCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR CCA 72 bp GAATCTGGATCTATTGAAACATGTTTAAAACGGGGTTaGTCACAACAGGATGGGCACAAATGGGAGCGGGGG +
Preference number: 3 (lower is better)
Translates to: ESGSIETCLKRG*SQQDGHKWERG
Trigger: CCCCCGCTCCCATTTGTGCCCATCCTGTTGTGACCAACCCCGTTTTAAACATGTTTCAATAGATCCAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
3UTR-3UTR CAA 90 bp ACAATAAAAGGGATCATTTATATCAGAGGGGTCCTGTGGCAGTGCTTTCAGTTGCTCTCCAGTACCCCCTaGTGGTCATCTGCTACTGTT +
Preference number: 3 (lower is better)
Translates to: TIKGIIYIRGVLWQCFQLLSSTP*WSSATV
Trigger: AACAGTAGCAGATGACCACAAGGGGGTACTGGAGAG...CAACTGAAAGCACTGCCACAGGACCCCTCTGATATAAATGATCCCTTTTATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCGCCCCTGCCAGTGCCTaGGGCTGCAGCCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPAPASA*GCSLAS
Trigger: ACTCGCCAGGCTGCAGCCTCAGGCACTGGCAGGGGC...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CCTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCGCCCCTGCCAGTGCCTaGGGCTGCAGCCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: PSHLAPTQAQLDLLPTFPAPASA*GCSLAS
Trigger: ACTCGCCAGGCTGCAGCCTCAGGCACTGGCAGGGGC...GGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCCCGCCTTTGGCGTCCTaGGGGAGAGGGGCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPPPLAS*GRGAVR
Trigger: CCTGACCGCCCCTCTCCCTCAGGACGCCAAAGGCGG...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
71% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000583211.5
CDS-3UTR GCA 90 bp CACCCACTTCTAGCTCCCTGCCCCCATCAGGGCCGAGGTAGTCGGGGCTGGCCCGGGCAGGCCCTGCCTTaGCCTGCAGAGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HPLLAPCPHQGRGSRGWPGQALP*PAEAGW
Trigger: CCACCCTGCCTCTGCAGGGCAAGGCAGGGCCTGCCC...GGGCCAGCCCCGACTACCTCGGCCCTGATGGGGGCAGGGAGCTAGAAGTGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CCTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCTGGAGCGCTGCACCGTaGTGCTGCCGCCGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PSHLAPTQAQLDLLPTFPWSAAP*CCRRLW
Trigger: CCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCA...GGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCTTCCCACCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPFPPSP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGGTGGGAA...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGGGTTCCCACCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: RGGHTVSGGSEGAWDPEGFPPSP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGGTGGGAA...CCCCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGAGAAGCGGCACCCGCTaGGTTCAGGCCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DVGATQSPVAVRELGTLRRSGTR*VQARPG
Trigger: CCCAGGCCGGGCCTGAACCCAGCGGGTGCCGCTTCT...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000583211.5
CDS-3UTR CCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCGGCCTCAGGCCGTCTTaGTGCCGGGGTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPGLRPS*CRGPPP
Trigger: AGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCC...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CCTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCAGAAGCGGCACCCGCTaGGTTCTGGCCCCGCGAGGA +
Preference number: 4 (lower is better)
Translates to: PSHLAPTQAQLDLLPTFPRSGTR*VLAPRG
Trigger: TCCTCGCGGGGCCAGAACCCAGCGGGTGCCGCTTCT...GGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578061.5
CDS-3UTR CCA 90 bp TGGGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCGGCCATGAGAGGGGGTaGCCTGGGCGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WGDVGATQSPVAVRELGTGHERG*PGRLLQ
Trigger: CTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGGCC...GGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000583211.5
CDS-3UTR GCA 90 bp CACCCACTTCTAGCTCCCTGCCCCCATCAGGGCCGAGGTAGTCGGGGCTGGCCCGCTGCACCGTGCTGCTaGCGCCGCCTTTGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: HPLLAPCPHQGRGSRGWPAAPCC*RRLWRH
Trigger: ATGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGC...GGGCCAGCCCCGACTACCTCGGCCCTGATGGGGGCAGGGAGCTAGAAGTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGAGCGCTGCACCGTGCTaGTGCCGCCGCCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: DVGATQSPVAVRELGTLRSAAPC*CRRLWR
Trigger: ACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCT...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGTGGAGCGCTGCACCGTaGTGCTGCCGCCGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: DVGATQSPVAVRELGTLRWSAAP*CCRRLW
Trigger: CCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCA...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CACCCACTTCTAGCTCCCTGCCCCCATCAGGGCCGAGGTAGTCGGGGCTGGCCCGGACAGTCCGCACTCTaGCACCCTCCTGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HPLLAPCPHQGRGSRGWPGQSAL*HPPAPS
Trigger: GGAAGGGGCAGGAGGGTGGCAGAGTGCGGACTGTCC...GGGCCAGCCCCGACTACCTCGGCCCTGATGGGGGCAGGGAGCTAGAAGTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TGGGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WGDVGATQSPVAVRELGTGGSLG*RSGTRW
Trigger: CCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACC...GGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CCTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCTGCTGCCGCCGCCTTTaGCGTCATGAGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSHLAPTQAQLDLLPTFPCCRRL*RHERGW
Trigger: CCACCCCCTCTCATGACGCCAAAGGCGGCGGCAGCA...GGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
CDS-3UTR CCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCTGCTGCCGCCGCCTTTaGCGTCATGAGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPCCRRL*RHERGW
Trigger: CCACCCCCTCTCATGACGCCAAAGGCGGCGGCAGCA...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
CDS-3UTR CCA 90 bp TGGGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCGGCCTCAGGCCGTCTTaGTGCCGGGGTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: WGDVGATQSPVAVRELGTGLRPS*CRGPPP
Trigger: AGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCC...GGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGGGGTGGCAGGGACAGGATaGAAGGGCCGCGCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: RGGHTVSGGSEGAWDPEGVAGTG*KGRAPH
Trigger: ATGCGGAGCGCGGCCCTTCCATCCTGTCCCTGCCAC...CCCCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR TCA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGACCGCCTTTGGCGTCATaGGAGGGGGTGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGPPLAS*EGVAWA
Trigger: CGCCCAGGCCACCCCCTCTCATGACGCCAAAGGCGG...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
CDS-3UTR CCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCCCACCAGCCGCTCCATaGGGTACACGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPPPAAP*GTRSSG
Trigger: GCCAGAAGACCGTGTACCCCATGGAGCGGCTGGTGG...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CCTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCGGGTCCACCTCCTTGTaGGCCCAGAGCTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PSHLAPTQAQLDLLPTFPGSTSL*AQSSLC
Trigger: GCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCC...GGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CCTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCAGCAGAGCCCTGCCCTaGTCCCCTACGCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: PSHLAPTQAQLDLLPTFPSRALP*SPTPEQ
Trigger: TTGCTCAGGCGTAGGGGACCAGGGCAGGGCTCTGCT...GGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGGGCCTGCAGAGGCAGGGTaGCTCCACTTCCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: RGGHTVSGGSEGAWDPEGPAEAG*LHFPIS
Trigger: GGAGATGGGGAAGTGGAGCCACCCTGCCTCTGCAGG...CCCCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCTGGGCCAACTCTGCATaGAGAGGCCAGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPWANSA*RGQGWG
Trigger: TCCCCAGCCCTGGCCTCTCCATGCAGAGTTGGCCCA...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCCGGCCATGAGAGGGGGTaGCCTGGGCGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGWWADPNPGFQTLTGFPGHERG*PGRLLQ
Trigger: CTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGGCC...GGGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAAGCGCTGCACCGTGCTaGTGCCGCCGCCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGSAAPC*CRRLWR
Trigger: ACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCT...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGACCTGGAGCAGAGCCCTaGCCTGGTCCCCTACGCCTG +
Preference number: 4 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGPGAEP*PGPLRL
Trigger: CAGGCGTAGGGGACCAGGGCAGGGCTCTGCTCCAGG...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTCCACTTCTAGCTCCCTaGCCCCATCAGGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: GRRGGHTVSGGSEGAWDPPLLAP*PHQGRG
Trigger: ACCTCGGCCCTGATGGGGGCAGGGAGCTAGAAGTGG...AGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TGGGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCAGGTCTCCTTCACCTaGGCCCGCAGGCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: WGDVGATQSPVAVRELGTQVSFT*ARRLKD
Trigger: GTCCTTCAGCCTGCGGGCCCAGGTGAAGGAGACCTG...GGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGCAGGTCTCCTTCACCTaGGCCCGCAGGCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: DVGATQSPVAVRELGTLRQVSFT*ARRLKD
Trigger: GTCCTTCAGCCTGCGGGCCCAGGTGAAGGAGACCTG...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGCCTCCCAGGGGGTCCTaGGGTGAGGTGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRPPRGS*GEVGRE
Trigger: CTCCCTCCCCACCTCACCCCAGGACCCCCTGGGAGG...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGGCTGGTGGTTCGAGATaGTCCCAAGCCCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: DVGATQSPVAVRELGTLRAGGSR*SQAPLG
Trigger: CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGC...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGATGCTGCCGCCGCCTTTaGCGTCCTGAGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GWWADPNPGFQTLTGCGRCCRRL*RPEGEG
Trigger: CCCCTCTCCCTCAGGACGCCAAAGGCGGCGGCAGCA...TCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583211.5
CDS-3UTR CCA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGCCCCGCCCAGAGCTGTaGGGCCGCAGAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVPRPEL*GRRDPA
Trigger: GGCTGGGTCTCTGCGGCCCCACAGCTCTGGGCGGGG...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR CCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGTGGGCGCTCCCGGCCTaGCTCCGGGATAACCGGGCG +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGWALPA*LRDNRA
Trigger: CGCCCGGTTATCCCGGAGCCAGGCCGGGAGCGCCCA...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR GCA 90 bp AGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCAGCGCTGCACCGTGCTaGTGCCGCCGCCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: SRVVGRPQSWFPNPHRLPSAAPC*CRRLWR
Trigger: ACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCT...GGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAAAGGACTTGGAGCGCTaGACCGTGCTGCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGKDLER*TVLLPP
Trigger: CGGCGGCAGCAGCACGGTGCAGCGCTCCAAGTCCTT...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCCAAGGACTTGGAGCGCTaGACCGTGCTGCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: AGWWADPNPGFQTLTGFPKDLER*TVLLPP
Trigger: CGGCGGCAGCAGCACGGTGCAGCGCTCCAAGTCCTT...GGGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCTCACCGGCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPASSPASP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGCCGGTGA...GGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCTGGAACATGGCTCGTTaGAGGTGGAAGCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPWNMAR*RWKPRV
Trigger: CACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCA...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCCTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPLQPGT*LVGGGS
Trigger: GCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAG...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGCCTCAGGCCGTCTTaGTGCCGGGGTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPAAGLRPS*CRGPPP
Trigger: AGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCC...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CACCCACTTCTAGCTCCCTGCCCCCATCAGGGCCGAGGTAGTCGGGGCTGGCCCGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGG +
Preference number: 4 (lower is better)
Translates to: HPLLAPCPHQGRGSRGWPGRPQS*FPNPHR
Trigger: CCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC...GGGCCAGCCCCGACTACCTCGGCCCTGATGGGGGCAGGGAGCTAGAAGTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CCTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGG +
Preference number: 4 (lower is better)
Translates to: PSHLAPTQAQLDLLPTFPGRPQS*FPNPHR
Trigger: CCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC...GGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TGGGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCAGGAAGCAGGGTGGTaGGCAGACCCCAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: WGDVGATQSPVAVRELGTQEAGW*ADPNPG
Trigger: ACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTG...GGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCAAGCAGGAAGCAGGGTaGTGGGCAGACCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPKQEAG*WADPNP
Trigger: AGGATTGGGGTCTGCCCACCACCCTGCTTCCTGCTT...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGACCTCCCAGGGGGTCCTaGGGTGAGGTGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRPPRGS*GEVGRE
Trigger: CTCCCTCCCCACCTCACCCCAGGACCCCCTGGGAGG...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAACCGCCTTTGGCGTCATaGGAGGGGGTGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEPPLAS*EGVAWA
Trigger: CGCCCAGGCCACCCCCTCTCATGACGCCAAAGGCGG...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
CDS-3UTR TCA 90 bp GGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGACTGGTCCCCTACGCCTaGGCAAGCCTCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GWWADPNPGFQTLTGCGRLVPYA*ASLIPF
Trigger: GAAGGGGATGAGGCTTGCTCAGGCGTAGGGGACCAG...TCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CACCCACTTCTAGCTCCCTGCCCCCATCAGGGCCGAGGTAGTCGGGGCTGGCCCCTGCAGGGGCATTTATaGTGCCCAACAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: HPLLAPCPHQGRGSRGWPLQGHL*CPTGGT
Trigger: AGTGCCACCTGTTGGGCATCATAAATGCCCCTGCAG...GGGCCAGCCCCGACTACCTCGGCCCTGATGGGGGCAGGGAGCTAGAAGTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp GGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGGTGTGTCAGGGAACTaGCACCCACTTCTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GRRGGHTVSGGSEGAWDPGVSGN*HPLLAP
Trigger: GGGAGCTAGAAGTGGGTGTCAGTTCCCTGACACACC...AGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGGGCCTGGGCGGCTCCTaGAGCCTGGAACATGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGGLGGS*SLEHGS
Trigger: CGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCC...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGGGCCTGGGCGGCTCCTaGAGCCTGGAACATGGCTCG +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKGLGGS*SLEHGS
Trigger: CGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCC...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCGGCCTGGGCGGCTCCTaGAGCCTGGAACATGGCTCG +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPASGLGGS*SLEHGS
Trigger: CGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCC...GGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTAGCGCTGCACCGTGCTaGTGCCGCCGCCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPASAAPC*CRRLWR
Trigger: ACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCT...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGATGGAGCGCTGCACCGTaGTGCTGCCGCCGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRWSAAP*CCRRLW
Trigger: CCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCA...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGGACTTGGAGCGCTaGACCGTGCTGCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRKDLER*TVLLPP
Trigger: CGGCGGCAGCAGCACGGTGCAGCGCTCCAAGTCCTT...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCGCTGGAAGTGGGGTTTaGAGTAGAACTCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPAGSGV*SRTPRA
Trigger: TGCACGGGGAGTTCTACTGCAAACCCCACTTCCAGC...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGACTCAGGCCGTCTTGGTaGCGGGGTCCACCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGLRPSW*RGPPPC
Trigger: ACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAG...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGATTCCCACCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRFPPSP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGGTGGGAA...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGCACTGGGGCAGGCCCTaGCTTGCCCTGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGHWGRP*LALQRQ
Trigger: CTGCCTCTGCAGGGCAAGGCAGGGCCTGCCCCAGTG...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGGGCCTGGCGAGTGCTTTTaGTTCTGCTTCTCCACGCTG +
Preference number: 4 (lower is better)
Translates to: RGGHTVSGGSEGAWDPEGPGECF*FCFSTL
Trigger: CAGCGTGGAGAAGCAGAAGCAAAAGCACTCGCCAGG...CCCCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGTCCCTCGAGGAGCAGTaGCTGCCTCAGCATAGTGAC +
Preference number: 4 (lower is better)
Translates to: DVGATQSPVAVRELGTLRSLEEQ*LPQHSD
Trigger: GTCACTATGCTGAGGCAGGCACTGCTCCTCGAGGGA...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCTCAGGCTGCGGCGGCTaGGGTCGCGGGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPSGCGG*GRGTLG
Trigger: GCCCAGTGTCCCGCGACCGCAGCCGCCGCAGCCTGA...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR GCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGGGACGAGTTCAGGCTaGGGCGGCTGCGGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKGTSSG*GGCGRG
Trigger: CCCGCGACCGCAGCCGCCGCAGCCTGAACTCGTCCC...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR GCA 90 bp TGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACGCGGGCGCGAGCTGCTaGCGCTACCAGTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: CFCFCFSTLVVRDGPKPHAGASC*RYQWSP
Trigger: CGGGGACCACTGGTAGCGGCAGCAGCTCGCGCCCGC...GTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583211.5
CDS-3UTR GCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTGGCGCGGGCGCGAGCTaGTGCCGCTACCAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPGAGAS*CRYQWS
Trigger: GGACCACTGGTAGCGGCAGCAGCTCGCGCCCGCGCC...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583211.5
CDS-3UTR CCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGAGAAGCGGCACCCGCTaGGTTCAGGCCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKRSGTR*VQARPG
Trigger: CCCAGGCCGGGCCTGAACCCAGCGGGTGCCGCTTCT...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKGGSLG*RSGTRW
Trigger: CCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACC...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRRGGHTVSGGSEGAWDPMARWR*KPRVEK
Trigger: CTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCAT...AGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TGGGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: WGDVGATQSPVAVRELGTLQPGT*LVGGGS
Trigger: GCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAG...GGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGTGCTGCCGCCGCCTTTaGCGTCATGAGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRCCRRL*RHERGW
Trigger: CCACCCCCTCTCATGACGCCAAAGGCGGCGGCAGCA...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
CDS-3UTR CCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGGGGTACACGGTCTTCTaGCAGGCGGCGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRGYTVF*QAAQVS
Trigger: GGAGACCTGCGCCGCCTGCCAGAAGACCGTGTACCC...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGG +
Preference number: 4 (lower is better)
Translates to: DVGATQSPVAVRELGTLRGRPQS*FPNPHR
Trigger: CCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGGCTTCTCCACGCTGGTaGTTCGAGATGGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: DVGATQSPVAVRELGTLRASPRW*FEMVPS
Trigger: GCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGC...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGGGGTCCTGGGGTGATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCACCCACTGGCAGCCTaGCCCTCCCGCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RGPGVIWLIPLSVQRCLPHPLAA*PSRSQA
Trigger: GGCCTGAGAGCGGGAGGGCCAGGCTGCCAGTGGGTG...GGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGATCACCCCAGGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CACCCACTTCTAGCTCCCTGCCCCCATCAGGGCCGAGGTAGTCGGGGCTGGCCCCCTGAACGTCACCAGTaGCTGAGTTCCCGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: HPLLAPCPHQGRGSRGWPPERHQ*LSSRSF
Trigger: AAAGCTCCGGGAACTCAGCCACTGGTGACGTTCAGG...GGGCCAGCCCCGACTACCTCGGCCCTGATGGGGGCAGGGAGCTAGAAGTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGCCGCCTTTGGCGTCATaGGAGGGGGTGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGPPLAS*EGVAWA
Trigger: CGCCCAGGCCACCCCCTCTCATGACGCCAAAGGCGG...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000578402.5
CDS-3UTR TCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCCTGGGCCCGCAGGCTaGAGGACTTGGAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKPGPAG*RTWSAA
Trigger: TGCAGCGCTCCAAGTCCTTCAGCCTGCGGGCCCAGG...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCAAGAGTTGTGGAAAATaGGCTTGTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPKSCGK*ACRPPA
Trigger: GGCTGGTGGCCGACAAGCTCATTTTCCACAACTCTT...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGGCCCCTGCCAGTGCCTaGGGCTGCAGCCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGAPASA*GCSLAS
Trigger: ACTCGCCAGGCTGCAGCCTCAGGCACTGGCAGGGGC...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGTCTGCACCCTTCCTGTaGCAGATCCCCCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRSAPFL*QIPQQA
Trigger: GGCCTGCTGGGGGATCTGTCACAGGAAGGGTGCAGA...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTCCGCCTTTGGCGTCCTaGGGGAGAGGGGCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLPPLAS*GRGAVR
Trigger: CCTGACCGCCCCTCTCCCTCAGGACGCCAAAGGCGG...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000580222.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGCCTGGGCGGCTCCTaGAGCCTGGAACATGGCTCG +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEGLGGS*SLEHGS
Trigger: CGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCC...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGGCTGCACCGTGCTGCTaGCGCCGCCTTTGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGAAPCC*RRLWRH
Trigger: ATGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGC...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000578402.5
CDS-3UTR GCA 90 bp GGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAGCTCCTTGTGCTGCTTaGGGCCAAACCCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: GWWADPNPGFQTLTGCGRAPCAA*GQTPRR
Trigger: ACGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGC...TCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGCCCAGAGCTCCTTGTaGTGCTTGCGGCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPAAAQSSL*CLRPNP
Trigger: GGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGC...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGCTCAGGCCGTCTTGGTaGCGGGGTCCACCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRLRPSW*RGPPPC
Trigger: ACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAG...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGTTCCCACCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKFPPSP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGGTGGGAA...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCACTGGGGCAGGCCCTaGCTTGCCCTGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKHWGRP*LALQRQ
Trigger: CTGCCTCTGCAGGGCAAGGCAGGGCCTGCCCCAGTG...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGCCTGGCGAGTGCTTTTaGTTCTGCTTCTCCACGCTG +
Preference number: 4 (lower is better)
Translates to: DVGATQSPVAVRELGTLRPGECF*FCFSTL
Trigger: CAGCGTGGAGAAGCAGAAGCAAAAGCACTCGCCAGG...CCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAACAGTGCTTGGAGCGCTaGACCGTGCTGCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEQCLER*TVLLPP
Trigger: CGGCGGCAGCAGCACGGTGCAGCGCTCCAAGCACTG...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578993.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGGGTACACGGTCTTCTaGCAGGCGGCGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAGYTVF*QAAQVS
Trigger: GGAGACCTGCGCCGCCTGCCAGAAGACCGTGTACCC...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCCCACCAGCCGCTCCATaGGGTACACGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SRVVGRPQSWFPNPHRLPPPAAP*GTRSSG
Trigger: GCCAGAAGACCGTGTACCCCATGGAGCGGCTGGTGG...GGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGGTCCACCTCCTTGTaGGCCCAGAGCTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPAAGSTSL*AQSSLC
Trigger: GCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCC...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGAGCAGAGCCCTGCCCTaGTCCCCTACGCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPAASRALP*SPTPEQ
Trigger: TTGCTCAGGCGTAGGGGACCAGGGCAGGGCTCTGCT...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTCCTCCCAGGGGGTCCTaGGGTGAGGTGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLPPRGS*GEVGRE
Trigger: CTCCCTCCCCACCTCACCCCAGGACCCCCTGGGAGG...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CTGAGTATTCGCTCTGCTCCCTCGAGGAGCAGTGCCTGCCTCAGCATAGTGACTGGCGCCATCACCCACTaGCAGCCTGGCCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LSIRSAPSRSSACLSIVTGAITH*QPGPPA
Trigger: AGCGGGAGGGCCAGGCTGCCAGTGGGTGATGGCGCC...AGTCACTATGCTGAGGCAGGCACTGCTCCTCGAGGGAGCAGAGCGAATACTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGCTCCAGGAGCTCCACTaGGGTGGTCCCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRLQELH*GGPNRA
Trigger: AGCCCTGTTGGGACCACCCCAGTGGAGCTCCTGGAG...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGTTGCACCCCAGGCACTaGAGTGCAGCGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGLHPRH*SAARTG
Trigger: GCCTGTCCTCGCTGCACTTCAGTGCCTGGGGTGCAA...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCTGCACCGTGCTGCTaGCGCCGCCTTTGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEAAPCC*RRLWRH
Trigger: ATGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGC...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
CDS-3UTR GCA 90 bp CTGAGTATTCGCTCTGCTCCCTCGAGGAGCAGTGCCTGCCTCAGCATAGTGACTAGCGCTGCACCGTGCTaGTGCCGCCGCCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: LSIRSAPSRSSACLSIVTSAAPC*CRRLWR
Trigger: ACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCT...AGTCACTATGCTGAGGCAGGCACTGCTCCTCGAGGGAGCAGAGCGAATACTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGAGCGCTGCACCGTGCTaGTGCCGCCGCCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKSAAPC*CRRLWR
Trigger: ACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCT...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAATGGAGCGCTGCACCGTaGTGCTGCCGCCGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: DPNPGFQTLTGCGRRKKEWSAAP*CCRRLW
Trigger: CCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCA...TTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGTGGAGCGCTGCACCGTaGTGCTGCCGCCGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGWSAAP*CCRRLW
Trigger: CCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCA...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR GCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGTGGAGCGCTGCACCGTaGTGCTGCCGCCGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKWSAAP*CCRRLW
Trigger: CCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCA...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCGCTCCTTGTGCTGCTTaGGGCCAAACCCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: SRVVGRPQSWFPNPHRLPAPCAA*GQTPRR
Trigger: ACGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGC...GGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGCTCAGGCCGTCTTGGTaGCGGGGTCCACCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKLRPSW*RGPPPC
Trigger: ACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAG...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCTCAGGCCGTCTTGGTaGCGGGGTCCACCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPASLRPSW*RGPPPC
Trigger: ACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAG...GGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp GTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACCTGGAGCAGAGCCCTaGCCTGGTCCCCTACGCCTG +
Preference number: 4 (lower is better)
Translates to: VAQKQVKGRGRWGDVGATPGAEP*PGPLRL
Trigger: CAGGCGTAGGGGACCAGGGCAGGGCTCTGCTCCAGG...TGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGCCTGGAGCAGAGCCCTaGCCTGGTCCCCTACGCCTG +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGPGAEP*PGPLRL
Trigger: CAGGCGTAGGGGACCAGGGCAGGGCTCTGCTCCAGG...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTGGGCAGGCCCTGCCTTaGCCTGCAGAGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QKQVKGRGRWGDVGATQSGQALP*PAEAGW
Trigger: CCACCCTGCCTCTGCAGGGCAAGGCAGGGCCTGCCC...AGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGCAGGCCCTGCCTTaGCCTGCAGAGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PVSVAQKQVKGRGRWGDVGQALP*PAEAGW
Trigger: CCACCCTGCCTCTGCAGGGCAAGGCAGGGCCTGCCC...CACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTCACTGGGGCAGGCCCTaGCTTGCCCTGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPHWGRP*LALQRQ
Trigger: CTGCCTCTGCAGGGCAAGGCAGGGCCTGCCCCAGTG...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTAGCACTTGCTGGGTCTaGTGGTTACCGCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GRRGGHTVSGGSEGAWDPSTCWV*WLPPFF
Trigger: GAAGAATGGCGGTAACCAGCAGACCCAGCAAGTGCT...AGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGGCTGCACCGTGCTGCTaGCGCCGCCTTTGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGAAPCC*RRLWRP
Trigger: AGGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGC...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580222.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCACCCGCTGGGTTCTaGAAGGGGAAGTCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAAPAGF*KGKSVG
Trigger: CCCGACTGACTTCCCCTTGCAGAACCCAGCGGGTGC...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578402.5
ENST00000580222.5
CDS-3UTR CCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGAGAAGCGGCACCCGCTaGGTTCAGGCCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETRSGTR*VQARPG
Trigger: CCCAGGCCGGGCCTGAACCCAGCGGGTGCCGCTTCT...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000583211.5
CDS-3UTR CCA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGACTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGLQPGT*LVGGGS
Trigger: GCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAG...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGCTCCTGCAGCCTaGAACATGGCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAAAPAA*NMARWR
Trigger: CCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGC...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAGCGGCTCCTGCAGCCTaGAACATGGCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRAAPAA*NMARWR
Trigger: CCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGC...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCCGTCATGAGAGGGGGTaGCCTGGGCGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPRHERG*PGRLLQ
Trigger: CTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGACG...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000578402.5
CDS-3UTR CCA 90 bp GACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAACGTCATGAGAGGGGGTaGCCTGGGCGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DPNPGFQTLTGCGRRKKERHERG*PGRLLQ
Trigger: CTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGACG...TTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
CDS-3UTR CCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGCGTCATGAGAGGGGGTaGCCTGGGCGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKRHERG*PGRLLQ
Trigger: CTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGACG...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
CDS-3UTR CCA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGCAGGTCTCCTTCACCTaGGCCCGCAGGCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVQVSFT*ARRLKD
Trigger: GTCCTTCAGCCTGCGGGCCCAGGTGAAGGAGACCTG...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGGGTACACGGTCTTCTaGCAGGCGGCGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKGYTVF*QAAQVS
Trigger: GGAGACCTGCGCCGCCTGCCAGAAGACCGTGTACCC...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGGGGTCCACCTCCTTGTaGGCCCAGAGCTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKGSTSL*AQSSLC
Trigger: GCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCC...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTGGGTCCACCTCCTTGTaGGCCCAGAGCTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GSRVVGRPQSWFPNPHRLGSTSL*AQSSLC
Trigger: GCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCC...AAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CCA 90 bp GTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCAGGCCTCAGGCCGTCTTaGTGCCGGGGTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: VLLLLLLHAGGSRWSQAPGLRPS*CRGPPP
Trigger: AGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCC...TGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGGGCCTCAGGCCGTCTTaGTGCCGGGGTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGGLRPS*CRGPPP
Trigger: AGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCC...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTGGCCTCAGGCCGTCTTaGTGCCGGGGTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPGLRPS*CRGPPP
Trigger: AGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCC...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CGCCCCATGGTGAGTCTGCACCCTTCCTGTGACAGATCCCCCAGCAGGCCACACCTTCCGCAGAGGGGGTaGAAGGTTACAGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RPMVSLHPSCDRSPSRPHLPQRG*KVTEAS
Trigger: TGAGGCCTCTGTAACCTTCCACCCCCTCTGCGGAAG...GTGTGGCCTGCTGGGGGATCTGTCACAGGAAGGGTGCAGACTCACCATGGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGGTAGATGGGGAGACGTaGGGGCCACACAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGVDGET*GPHSLR
Trigger: CCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTAC...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGCAGGATGGGCACAAATaGGAGCGGGGGAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGQDGHK*ERGRGV
Trigger: CACTCCCCTCCCCCGCTCCCATTTGTGCCCATCCTG...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGCAGGATGGGCACAAATaGGAGCGGGGGAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVQDGHK*ERGRGV
Trigger: CACTCCCCTCCCCCGCTCCCATTTGTGCCCATCCTG...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTCAGGATGGGCACAAATaGGAGCGGGGGAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAQDGHK*ERGRGV
Trigger: CACTCCCCTCCCCCGCTCCCATTTGTGCCCATCCTG...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCTCCAGTACCCCCTTGTaGTCATCTGCTACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPSSTPL*SSATVA
Trigger: AGCAACAGTAGCAGATGACCACAAGGGGGTACTGGA...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGTGCTGCCGCCGCCTTTaGCGTCCTGAGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGCCRRL*RPEGEG
Trigger: CCCCTCTCCCTCAGGACGCCAAAGGCGGCGGCAGCA...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGCGCTCCGCATCCTACTaGGAGGGGACGAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVRSASY*EGTSSG
Trigger: GCCTGAACTCGTCCCCTCCCAGTAGGATGCGGAGCG...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR TCA 90 bp AATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCCTGGGCCCGCAGGCTaGAGGACTTGGAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: NPGFQTLTGCGRRKKEGVPGPAG*RTWSAA
Trigger: TGCAGCGCTCCAAGTCCTTCAGCCTGCGGGCCCAGG...GACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAAGGCTGAGCTTGGTGTaGCAGTGCTTGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGRLSLV*QCLQQK
Trigger: CTTCTGCTGCAAGCACTGTCACACCAAGCTCAGCCT...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAACTGGTCCCCTACGCCTaGGCAAGCCTCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEELVPYA*ASLIPF
Trigger: GAAGGGGATGAGGCTTGCTCAGGCGTAGGGGACCAG...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCTGAGGGGTCTCTTTGGATTTCCTaGGACAGTAGCTGTGACTGC +
Preference number: 4 (lower is better)
Translates to: RGGHTVSGGSEGAWDPEGSLWIS*DSSCDC
Trigger: GCAGTCACAGCTACTGTCTCAGGAAATCCAAAGAGA...CCCCTCAGGGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAGGCTGAGCTTGGTGTaGCAGTGCTTGGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKRLSLV*QCLERC
Trigger: GCAGCGCTCCAAGCACTGTCACACCAAGCTCAGCCT...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578993.5
CDS-3UTR GCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTGCTGCACCGTGCTGCTaGCGCCGCCTTTGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPAAPCC*RRLWRH
Trigger: ATGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGC...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
CDS-3UTR GCA 90 bp CTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCCCCTCCAAGGACTTGGAGCGCTaGACCGTGCTGCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LIPLSVQRCLPLSSSCPSKDLER*TVLLPP
Trigger: CGGCGGCAGCAGCACGGTGCAGCGCTCCAAGTCCTT...GGAGGGGCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTAAGGACTTGGAGCGCTaGACCGTGCTGCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLKDLER*TVLLPP
Trigger: CGGCGGCAGCAGCACGGTGCAGCGCTCCAAGTCCTT...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCCGCTGGAAGTGGGGTTTaGAGTAGAACTCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: AGWWADPNPGFQTLTGFPAGSGV*SRTPRA
Trigger: TGCACGGGGAGTTCTACTGCAAACCCCACTTCCAGC...GGGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGCTGGAAGTGGGGTTTaGAGTAGAACTCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGAGSGV*SRTPRA
Trigger: TGCACGGGGAGTTCTACTGCAAACCCCACTTCCAGC...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGCAGAGCTCCTTGTGCTaGTTGCGGCCAAACCCCTCG +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKQSSLC*LRPNPS
Trigger: CGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTG...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCAGAGCTCCTTGTGCTaGTTGCGGCCAAACCCCTCG +
Preference number: 4 (lower is better)
Translates to: GSRVVGRPQSWFPNPHRLQSSLC*LRPNPS
Trigger: CGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTG...AAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGCCCAGAGCTCCTTGTaGTGCTTGCGGCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKAQSSL*CLRPNP
Trigger: GGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGC...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTTTCCCACCTTCCCCCTaGCGGCTCCAGGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: QKQVKGRGRWGDVGATQSFPPSP*RLQAFR
Trigger: GCGGAAGGCCTGGAGCCGGCAGGGGGAAGGTGGGAA...AGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCCTGGAGCAGAGCCCTaGCCTGGTCCCCTACGCCTG +
Preference number: 4 (lower is better)
Translates to: NPGFQTLTGCGRRKKEGVPGAEP*PGPLRL
Trigger: CAGGCGTAGGGGACCAGGGCAGGGCTCTGCTCCAGG...GACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TCCACTGGGGTGGTCCCAACAGGGCTGATTTACCAGGGTGGCACTGCTGGCCCTACCTTGGGCAGCACTTaGTGGGTCTGCTGGTTACCG +
Preference number: 4 (lower is better)
Translates to: STGVVPTGLIYQGGTAGPTLGST*WVCWLP
Trigger: CGGTAACCAGCAGACCCAGCAAGTGCTGCCCAAGGT...AGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACCCCAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTGCTGCACCGTGCTGCTaGCGCCGCCTTTGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: QKQVKGRGRWGDVGATQSAAPCC*RRLWRP
Trigger: AGGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGC...AGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583211.5
CDS-3UTR GCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCCTGGGCCATTCACTaGCTCGGTTTCCCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEAWAIH*LGFPRL
Trigger: CAACCGGGGGAAACCGAGGCAGTGAATGGCCCAGGC...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR CCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRMARWR*KPRVEK
Trigger: CTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCAT...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGCTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPAALQPGT*LVGGGS
Trigger: GCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAG...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGCGTCATGAGAGGGGGTaGCCTGGGCGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETRHERG*PGRLLQ
Trigger: CTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGACG...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000578402.5
CDS-3UTR CCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGTACACGGTCTTCTaGCAGGCGGCGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLGYTVF*QAAQVS
Trigger: GGAGACCTGCGCCGCCTGCCAGAAGACCGTGTACCC...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGCTTCCGCAGAGGGGGTaGAAGGTTACAGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPAALPQRG*KVTEAS
Trigger: TGAGGCCTCTGTAACCTTCCACCCCCTCTGCGGAAG...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCAGGAAGCAGGGTGGTaGGCAGACCCCAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSRVVGRPQSWFPNPHRLQEAGW*ADPNPG
Trigger: ACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTG...AAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGAAGGGTAGAGGTAGATaGGGAGACGTGGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPAAKGRGR*GDVGAT
Trigger: TGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTT...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GATTTACCAGGGTGGCACTGCTGGCCCTCACAACCTGAACGTCACCAGTGGCTGCCTGCAGAGGCAGGGTaGCTCCACTTCCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: DLPGWHCWPSQPERHQWLPAEAG*LHFPIS
Trigger: GGAGATGGGGAAGTGGAGCCACCCTGCCTCTGCAGG...CAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGCTGGTGGTTCGAGATaGTCCCAAGCCCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKAGGSR*SQAPLG
Trigger: CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGC...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTAGAAGCGGCACCCGCTaGGTTCTGCAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPARSGTR*VLQGEV
Trigger: GACTTCCCCTTGCAGAACCCAGCGGGTGCCGCTTCT...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578402.5
ENST00000580222.5
3UTR CAA 72 bp ACCGGGGCGCCCTCAGGTCCTCCCAACTTGCCTGGTTaGCTCTGCTGTGAACTCATCCCTCATTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TGAPSGPPNLPG*LCCELIPHCPW
Trigger: CCAGGGACAATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAAGTTGGGAGGACCTGAGGGCGCCCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGGTGGGTGTGACAGCATaGAGCCCTCGCTGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGVGVTA*SPRCEE
Trigger: CTCTTCACAGCGAGGGCTTCATGCTGTCACACCCAC...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CTAAAACCTTGGGCAGCACTTGCTGGGTCTGCTGGTTACCGCCATTCTTCGCTAGGCCTGGGCGGCTCCTaGAGCCTGGAACATGGCTCG +
Preference number: 4 (lower is better)
Translates to: LKPWAALAGSAGYRHSSLGLGGS*SLEHGS
Trigger: CGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCC...TAGCGAAGAATGGCGGTAACCAGCAGACCCAGCAAGTGCTGCCCAAGGTTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGCCCAGAGCTCCTTGTaGTGCTTGCGGCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKAQSSL*CLRPNP
Trigger: GGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGC...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGCCCAGAGCTCCTTGTaGTGCTTGCGGCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLAQSSL*CLRPNP
Trigger: GGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGC...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTCTCAGGCCGTCTTGGTaGCGGGGTCCACCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPLRPSW*RGPPPC
Trigger: ACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAG...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGATCCTCCCCCATGGGCTaGAGGGGCATTTATGATGCC +
Preference number: 4 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRSSPMG*RGIYDA
Trigger: GGCATCATAAATGCCCCTGCAGCCCATGGGGGAGGA...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGCAGTCCAGAGGTGTCTaGCCCTTTCCTCCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKQSRGV*PFPPVA
Trigger: GGCAACTGGAGGAAAGGGGCAGACACCTCTGGACTG...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp GGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGATGTGGGAAGGGGCCGTaGCGTCACTTTCTCATCATT +
Preference number: 4 (lower is better)
Translates to: GWWADPNPGFQTLTGCGRCGKGP*RHFLII
Trigger: AATGATGAGAAAGTGACGGCACGGCCCCTTCCCACA...TCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGCACCCGCTGGGTTCTaGAAGGGGAAGTCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKAPAGF*KGKSVG
Trigger: CCCGACTGACTTCCCCTTGCAGAACCCAGCGGGTGC...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAMARWR*KPRVEK
Trigger: CTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCAT...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPASLQPGT*LVGGGS
Trigger: GCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAG...GGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTCTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPALQPGT*LVGGGS
Trigger: GCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAG...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGCGGCTCCTGCAGCCTaGAACATGGCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKAAPAA*NMARWR
Trigger: CCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGC...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCAGCGGCTCCTGCAGCCTaGAACATGGCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VLLLLLLHAGGSRWSQAPAAPAA*NMARWR
Trigger: CCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGC...TGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGCAGGTCTCCTTCACCTaGGCCCGCAGGCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKQVSFT*ARRLKD
Trigger: GTCCTTCAGCCTGCGGGCCCAGGTGAAGGAGACCTG...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTCAGGTCTCCTTCACCTaGGCCCGCAGGCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLQVSFT*ARRLKD
Trigger: GTCCTTCAGCCTGCGGGCCCAGGTGAAGGAGACCTG...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGCCACCAGCCGCTCCATaGGGTACACGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGPPAAP*GTRSSG
Trigger: GCCAGAAGACCGTGTACCCCATGGAGCGGCTGGTGG...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTCCACCAGCCGCTCCATaGGGTACACGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPPPAAP*GTRSSG
Trigger: GCCAGAAGACCGTGTACCCCATGGAGCGGCTGGTGG...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCGGGTCCACCTCCTTGTaGGCCCAGAGCTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPGSTSL*AQSSLC
Trigger: GCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCC...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGAGCAGAGCCCTGCCCTaGTCCCCTACGCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKSRALP*SPTPEQ
Trigger: TTGCTCAGGCGTAGGGGACCAGGGCAGGGCTCTGCT...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGG +
Preference number: 4 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRGRPQS*FPNPHR
Trigger: CCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCAAGCAGGAAGCAGGGTaGTGGGCAGACCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPASKQEAG*WADPNP
Trigger: AGGATTGGGGTCTGCCCACCACCCTGCTTCCTGCTT...GGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGAAGCAGGAAGCAGGGTaGTGGGCAGACCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGKQEAG*WADPNP
Trigger: AGGATTGGGGTCTGCCCACCACCCTGCTTCCTGCTT...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGTAGATGGGGAGACGTaGGGGCCACACAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLVDGET*GPHSLR
Trigger: CCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTAC...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGACCATCTCCTCCCCCATaGGCTGCAGGGGCATTTATG +
Preference number: 4 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRPSPPP*AAGAFM
Trigger: CATAAATGCCCCTGCAGCCCATGGGGGAGGAGATGG...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGCCTGCAGAGGCAGGGTaGCTCCACTTCCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGPAEAG*LHFPIS
Trigger: GGAGATGGGGAAGTGGAGCCACCCTGCCTCTGCAGG...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGTCTGCTTCTCCACGCTaGTGGTTCGAGATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPAASASPR*WFEMVP
Trigger: TGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGA...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCCGCTCACTTCACACTTaGGAGGATCCAGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPRSLHT*EDPGRG
Trigger: GCCCCGGCCTGGATCCTCCCAAGTGTGAAGTGAGCG...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TCCACTGGGGTGGTCCCAACAGGGCTGATTTACCAGGGTGGCACTGCTGGCCCTGCTGATTTACCAGGGTaGCACTGCTGGCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: STGVVPTGLIYQGGTAGPADLPG*HCWPSQ
Trigger: TTGTGAGGGCCAGCAGTGCCACCCTGGTAAATCAGC...AGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACCCCAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCCAGGTATGGTGCCTaGCAACGAGCCTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEARYGA*QRAWAF
Trigger: AAAGGCCCAGGCTCGTTGCCAGGCACCATACCTGGC...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAGGCTGAGCTTGGTGTaGCAGTGCTTGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKRLSLV*QCLQQK
Trigger: CTTCTGCTGCAAGCACTGTCACACCAAGCTCAGCCT...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp GGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTAGGCTGAGCTTGGTGTaGCAGTGCTTGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSRVVGRPQSWFPNPHRLRLSLV*QCLQQK
Trigger: CTTCTGCTGCAAGCACTGTCACACCAAGCTCAGCCT...AAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR TCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGATGAAGCCCTCGCTGTaGAGAGGAGCCCTCCCATTT +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKMKPSL*RGALPF
Trigger: AAATGGGAGGGCTCCTCTTCACAGCGAGGGCTTCAT...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTTGGGCCCAAAGGTTCTaGAGGGCAGTTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPWAQRF*RAVPGS
Trigger: GCTGCCAGGAACTGCCCTTCAGAACCTTTGGGCCCA...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTTGTGGGGCTTCAGGGTaGCCTGGGCCCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLCGASG*PGPKGS
Trigger: AGAACCTTTGGGCCCAGGTCACCCTGAAGCCCCACA...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAGCTGGAAGTGGGGTTTaGAGTAGAACTCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRAGSGV*SRTPRA
Trigger: TGCACGGGGAGTTCTACTGCAAACCCCACTTCCAGC...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCAGCTCCTTGTGCTGCTTaGGGCCAAACCCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: VLLLLLLHAGGSRWSQAPAPCAA*GQTPRR
Trigger: ACGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGC...TGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGCAGAGCTCCTTGTGCTaGTTGCGGCCAAACCCCTCG +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKQSSLC*LRPNPS
Trigger: CGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTG...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAACAGAGCTCCTTGTGCTaGTTGCGGCCAAACCCCTCG +
Preference number: 4 (lower is better)
Translates to: DPNPGFQTLTGCGRRKKEQSSLC*LRPNPS
Trigger: CGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTG...TTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTCAGAGCTCCTTGTGCTaGTTGCGGCCAAACCCCTCG +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPQSSLC*LRPNPS
Trigger: CGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTG...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGCTCAGGCCGTCTTGGTaGCGGGGTCCACCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETLRPSW*RGPPPC
Trigger: ACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAG...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTCCTGGCGAGTGCTTTTaGTTCTGCTTCTCCACGCTG +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAPGECF*FCFSTL
Trigger: CAGCGTGGAGAAGCAGAAGCAAAAGCACTCGCCAGG...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACGACAACCCAGACTTCTaGCTGTGTCCCACCGGGGCG +
Preference number: 4 (lower is better)
Translates to: VAANPPGVSVLIDPMSGDDNPDF*LCPTGA
Trigger: CGCCCCGGTGGGACACAGGCAGAAGTCTGGGTTGTC...GTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEMARWR*KPRVEK
Trigger: CTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCAT...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGTGGAACATGGCTCGTTaGAGGTGGAAGCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKWNMAR*RWKPRV
Trigger: CACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCA...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGCCACCAGCCGCTCCATaGGGTACACGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETPPAAP*GTRSSG
Trigger: GCCAGAAGACCGTGTACCCCATGGAGCGGCTGGTGG...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGGGGTCCACCTCCTTGTaGGCCCAGAGCTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETGSTSL*AQSSLC
Trigger: GCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCC...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCTTCCGCAGAGGGGGTaGAAGGTTACAGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKLPQRG*KVTEAS
Trigger: TGAGGCCTCTGTAACCTTCCACCCCCTCTGCGGAAG...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAACAGGAAGCAGGGTGGTaGGCAGACCCCAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: DPNPGFQTLTGCGRRKKEQEAGW*ADPNPG
Trigger: ACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTG...TTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTGTAGATGGGGAGACGTaGGGGCCACACAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QKQVKGRGRWGDVGATQSVDGET*GPHSLR
Trigger: CCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTAC...AGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGAAGGGTAGAGGTAGATaGGGAGACGTGGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKKGRGR*GDVGAT
Trigger: TGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTT...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTTGGTCACAACAGGATaGGCACAAATGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPALVTTG*AQMGAG
Trigger: CCCCGCTCCCATTTGTGCCCATCCTGTTGTGACCAA...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGTTGGTCACAACAGGATaGGCACAAATGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGLVTTG*AQMGAG
Trigger: CCCCGCTCCCATTTGTGCCCATCCTGTTGTGACCAA...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCCACTGGGGTGGTCCCAACAGGGCTGATTTACCAGGGTGGCACTGCTGGCCCTACTCAGGCAGTTGTATaGTGTGGTGGCAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: STGVVPTGLIYQGGTAGPTQAVV*CGGSKP
Trigger: GGGTTTGCTGCCACCACACCATACAACTGCCTGAGT...AGGGCCAGCAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCACCCCAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGCAAGTAGAGGGGTCCTaGGGTGATCTGGCTGATACC +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKQVEGS*GDLADT
Trigger: GGTATCAGCCAGATCACCCCAGGACCCCTCTACTTG...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACAGCAGGGGCCAGGTATaGTGCCTGGCAACGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VAANPPGVSVLIDPMSGDSRGQV*CLATSL
Trigger: CAGGCTCGTTGCCAGGCACCATACCTGGCCCCTGCT...GTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGTGGGGAAGCAACGGTaGCAGGGACAGGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKVGKQR*QGQDGR
Trigger: CCTTCCATCCTGTCCCTGCCACCGTTGCTTCCCCAC...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR CCA 90 bp TGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACAGAAGCGGCACCCGCTaGGTTCTGCAAGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: CFCFCFSTLVVRDGPKPHRSGTR*VLQGEV
Trigger: GACTTCCCCTTGCAGAACCCAGCGGGTGCCGCTTCT...GTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR TCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGAGTTGTGGAAAATaGGCTTGTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKKSCGK*ACRPPA
Trigger: GGCTGGTGGCCGACAAGCTCATTTTCCACAACTCTT...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp ACTCAGGCAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCTGGTCCCCTACGCCTaGGCAAGCCTCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TQAVVWCGGSKPSRSLCSLVPYA*ASLIPF
Trigger: GAAGGGGATGAGGCTTGCTCAGGCGTAGGGGACCAG...AGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCTGCAGGGGCATTTATaGTGCCCAACAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKLQGHL*CPTGGT
Trigger: AGTGCCACCTGTTGGGCATCATAAATGCCCCTGCAG...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CTAAAACCTTGGGCAGCACTTGCTGGGTCTGCTGGTTACCGCCATTCTTCGCTAATGCCCGCCCCATGGTaGGTCTGCACCCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LKPWAALAGSAGYRHSSLMPAPW*VCTLPV
Trigger: CACAGGAAGGGTGCAGACTCACCATGGGGCGGGCAT...TAGCGAAGAATGGCGGTAACCAGCAGACCCAGCAAGTGCTGCCCAAGGTTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp CCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGCTGGCCCTCACAACCTaGACGTCACCAGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PVSVAQKQVKGRGRWGDVLALTT*TSPVAE
Trigger: CTCAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAG...CACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp GACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAATGGTCCCAACAGGGCTaGTTTACCAGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: DPNPGFQTLTGCGRRKKEWSQQG*FTRVAL
Trigger: CAGTGCCACCCTGGTAAATCAGCCCTGTTGGGACCA...TTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp GCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCCTGGTGTGACAGTGCTTaGAGCAGAAGCAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: AGWWADPNPGFQTLTGFPWCDSA*SRSKSC
Trigger: ACAACTCTTGCTTCTGCTGCAAGCACTGTCACACCA...GGGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGCTGGAAGTGGGGTTTaGAGTAGAACTCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKAGSGV*SRTPRA
Trigger: TGCACGGGGAGTTCTACTGCAAACCCCACTTCCAGC...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTGCTCCTTGTGCTGCTTaGGGCCAAACCCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: QKQVKGRGRWGDVGATQSAPCAA*GQTPRR
Trigger: ACGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGC...AGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCGCTCCTTGTGCTGCTTaGGGCCAAACCCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: NPGFQTLTGCGRRKKEGVAPCAA*GQTPRR
Trigger: ACGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGC...GACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp CCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGCTCCTTGTGCTGCTTaGGGCCAAACCCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: PVSVAQKQVKGRGRWGDVAPCAA*GQTPRR
Trigger: ACGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGC...CACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACATCCTCCCCCATGGGCTaGAGGGGCATTTATGATGCC +
Preference number: 4 (lower is better)
Translates to: VAQKQVKGRGRWGDVGATSSPMG*RGIYDA
Trigger: GGCATCATAAATGCCCCTGCAGCCCATGGGGGAGGA...TGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGGAGTGCTTTTGCTTCTaGTTCTCCACGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRECFCF*FSTLVV
Trigger: AACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACTC...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp ATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCGGGAACGCGGCAGCTTaGACCCCAGGCACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: IWLIPLSVQRCLPLSSSCGNAAA*TPGTEV
Trigger: CACTTCAGTGCCTGGGGTGCAAGCTGCCGCGTTCCC...GCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTGCTGAGTATTCGCTCTaGTCCCTCGAGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPAEYSL*SLEEQC
Trigger: GCACTGCTCCTCGAGGGAGCAGAGCGAATACTCAGC...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCCCCTCCACCGAGGGCTTGCAGTaGAAAGCCAGGCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LIPLSVQRCLPLSSSCPSTEGLQ*KARPVL
Trigger: CAACACTGGCCTGGCTTTGCACTGCAAGCCCTCGGT...GGAGGGGCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTTGGAACATGGCTCGTTaGAGGTGGAAGCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPWNMAR*RWKPRV
Trigger: CACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCA...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCTGGAACATGGCTCGTTaGAGGTGGAAGCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPWNMAR*RWKPRV
Trigger: CACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCA...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTTGGAACATGGCTCGTTaGAGGTGGAAGCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLWNMAR*RWKPRV
Trigger: CACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCA...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGTGCTGCCGCCGCCTTTaGCGTCATGAGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SKPSRSLCSHRSHVWRHQCCRRL*RHERGW
Trigger: CCACCCCCTCTCATGACGCCAAAGGCGGCGGCAGCA...CTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGACAGAAGCAAGAGTTGTaGAAAATGAGCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GWWADPNPGFQTLTGCGRQKQEL*KMSLSA
Trigger: GGCCGACAAGCTCATTTTCCACAACTCTTGCTTCTG...TCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACCTTCCGCAGAGGGGGTaGAAGGTTACAGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: CFCFCFSTLVVRDGPKPHLPQRG*KVTEAS
Trigger: TGAGGCCTCTGTAACCTTCCACCCCCTCTGCGGAAG...GTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTCTTCCGCAGAGGGGGTaGAAGGTTACAGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLLPQRG*KVTEAS
Trigger: TGAGGCCTCTGTAACCTTCCACCCCCTCTGCGGAAG...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGG +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPGRPQS*FPNPHR
Trigger: CCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGCAGACCCCAATCCTaGTTTCCAAACCCTCACCGG +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLGRPQS*FPNPHR
Trigger: CCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCAGGAAGCAGGGTGGTaGGCAGACCCCAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: NPGFQTLTGCGRRKKEGVQEAGW*ADPNPG
Trigger: ACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTG...GACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CCTCCCGCTCTCAGGCCTCTTCACAATGGGGTGCATATGGTAAGTTGGTGGGTCAAGCAGGAAGCAGGGTaGTGGGCAGACCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: PPALRPLHNGVHMVSWWVKQEAG*WADPNP
Trigger: AGGATTGGGGTCTGCCCACCACCCTGCTTCCTGCTT...GACCCACCAACTTACCATATGCACCCCATTGTGAAGAGGCCTGAGAGCGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACAAGCAGGAAGCAGGGTaGTGGGCAGACCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: CFCFCFSTLVVRDGPKPHKQEAG*WADPNP
Trigger: AGGATTGGGGTCTGCCCACCACCCTGCTTCCTGCTT...GTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGTCCTCCCTGTCTCCGTaGCTCAGAAACAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVSSLSP*LRNRLR
Trigger: CCTTAACCTGTTTCTGAGCCACGGAGACAGGGAGGA...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGATGATGCCCAACAGGTaGCACTGTCGCGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGMMPNR*HCRAPS
Trigger: GGAAGGAGCGCGACAGTGCCACCTGTTGGGCATCAT...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTATGATGCCCAACAGGTaGCACTGTCGCGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPMMPNR*HCRAPS
Trigger: GGAAGGAGCGCGACAGTGCCACCTGTTGGGCATCAT...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTCCATCTCCTCCCCCATaGGCTGCAGGGGCATTTATG +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPPSPPP*AAGAFM
Trigger: CATAAATGCCCCTGCAGCCCATGGGGGAGGAGATGG...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACGCTTCTCCACGCTGGTaGTTCGAGATGGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: CFCFCFSTLVVRDGPKPHASPRW*FEMVPS
Trigger: GCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGC...GTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGTTGTATGGTGTGGTaGCAGCAAACCCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRSCMVW*QQTLQE
Trigger: CTCCTGGAGGGTTTGCTGCCACCACACCATACAACT...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGCCAGGGTGGCACTGCTaGCCCTCACAACCTGAACGT +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETPGWHC*PSQPER
Trigger: ACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGG...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp AATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCTGGTGTGACAGTGCTTaGAGCGCTGCACCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NPGFQTLTGCGRRKKEGVWCDSA*SAAPCC
Trigger: GCAGCACGGTGCAGCGCTCCAAGCACTGTCACACCA...GACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578993.5
CDS-3UTR TCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCAAACCACTGTGGGTGTaGCAGCATGAAGCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPKPLWV*QHEALA
Trigger: AGCGAGGGCTTCATGCTGTCACACCCACAGTGGTTT...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCCCCAGAACTGAGGGGTaGGGTGGAGTTTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPPRTEG*GGVSVP
Trigger: TGGAACTGAAACTCCACCTCACCCCTCAGTTCTGGG...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTGCTGGAAGTGGGGTTTaGAGTAGAACTCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPAGSGV*SRTPRA
Trigger: TGCACGGGGAGTTCTACTGCAAACCCCACTTCCAGC...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGAGTGCTTTTGCTTCTaGTTCTCCACGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAECFCF*FSTLVV
Trigger: AACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACTC...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PVSVAQKQVKGRGRWGDVMARWR*KPRVEK
Trigger: CTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCAT...CACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CTGAATTGTGGATCGTGCAGCCATGGTTATTGTGGAACTGTGGAACCTGCAGCCGCGGCTCCTGCAGCCTaGAACATGGCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LNCGSCSHGYCGTVEPAAAAPAA*NMARWR
Trigger: CCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGC...GGCTGCAGGTTCCACAGTTCCACAATAACCATGGCTGCACGATCCACAATTCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp AATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTTCCGCAGAGGGGGTaGAAGGTTACAGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: NPGFQTLTGCGRRKKEGVLPQRG*KVTEAS
Trigger: TGAGGCCTCTGTAACCTTCCACCCCCTCTGCGGAAG...GACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CCA 90 bp CAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTGCTTCTCCACGCTGGTaGTTCGAGATGGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QKQVKGRGRWGDVGATQSASPRW*FEMVPS
Trigger: GCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGC...AGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTTCTGCTTCTCCACGCTaGTGGTTCGAGATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLSASPR*WFEMVP
Trigger: TGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGA...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCTCTGCTTCTCCACGCTaGTGGTTCGAGATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPSASPR*WFEMVP
Trigger: TGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGA...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGGCAGTTGTATGGTGTaGTGGCAGCAAACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKGSCMV*WQQTLQ
Trigger: CTGGAGGGTTTGCTGCCACCACACCATACAACTGCC...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGTCTGGTGCAGGAAGTTaGCCTGCCCTGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PVSVAQKQVKGRGRWGDVSGAGS*PALRGS
Trigger: AGAGCCTCTCAGGGCAGGCCAACTTCCTGCACCAGA...CACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGGCCTGGCAACGAGCCTaGGCCTTTCAAGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETAWQRA*AFQAEE
Trigger: CTCTTCTGCTTGAAAGGCCCAGGCTCGTTGCCAGGC...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGTGGATCGTGCAGCCATaGTTATTGTGGAACTGTGGA +
Preference number: 4 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRWIVQP*LLWNCG
Trigger: TCCACAGTTCCACAATAACCATGGCTGCACGATCCA...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGATCTGTGTCTGAATTGTaGATCGTGCAGCCATGGTTA +
Preference number: 4 (lower is better)
Translates to: GWWADPNPGFQTLTGCGRSVSEL*IVQPWL
Trigger: TAACCATGGCTGCACGATCCACAATTCAGACACAGA...TCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGAAGAGTTGTGGAAAATaGGCTTGTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKKSCGK*ACRPPA
Trigger: GGCTGGTGGCCGACAAGCTCATTTTCCACAACTCTT...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGAAGAGTTGTGGAAAATaGGCTTGTCGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGKSCGK*ACRPPA
Trigger: GGCTGGTGGCCGACAAGCTCATTTTCCACAACTCTT...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR TCA 90 bp CCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGAGGCTGAGCTTGGTGTaGCAGTGCTTGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PVSVAQKQVKGRGRWGDVRLSLV*QCLQQK
Trigger: CTTCTGCTGCAAGCACTGTCACACCAAGCTCAGCCT...CACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGCTGCAGGGGCATTTATaGTGCCCAACAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETLQGHL*CPTGGT
Trigger: AGTGCCACCTGTTGGGCATCATAAATGCCCCTGCAG...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR TCA 90 bp AATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCGAACCAACCCAGAACTaGGGGGTGAGGTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: NPGFQTLTGCGRRKKEGVEPTQN*GVRWSF
Trigger: GAAACTCCACCTCACCCCTCAGTTCTGGGTTGGTTC...GACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTGGTGTGACAGTGCTTaGAGCAGAAGCAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAWCDSA*SRSKSC
Trigger: ACAACTCTTGCTTCTGCTGCAAGCACTGTCACACCA...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTTGCTCTTAAACAGCTaGTGGAAGTGGGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RKQGGGQTPILVSKPSPALLLNS*WKWGLQ
Trigger: CTGCAAACCCCACTTCCAGCAGCTGTTTAAGAGCAA...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGTTGCTCTTAAACAGCTaGTGGAAGTGGGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKLLLNS*WKWGLQ
Trigger: CTGCAAACCCCACTTCCAGCAGCTGTTTAAGAGCAA...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCTTGCTCTTAAACAGCTaGTGGAAGTGGGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KQGGGQTPILVSKPSPASLLLNS*WKWGLQ
Trigger: CTGCAAACCCCACTTCCAGCAGCTGTTTAAGAGCAA...GGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR GCA 90 bp CAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCAGAGCTCCTTGTGCTaGTTGCGGCCAAACCCCTCG +
Preference number: 4 (lower is better)
Translates to: QLYGVVAANPPGVSVLIDQSSLC*LRPNPS
Trigger: CGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTG...ATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCCCCTCCGACAGTAGCTGTGACTaGACCTCCGCAGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: LIPLSVQRCLPLSSSCPSDSSCD*TSAELE
Trigger: TTCAAGCTCTGCGGAGGTGCAGTCACAGCTACTGTC...GGAGGGGCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGAACCAAGATGATCCTTaGCATCTGAGACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVNQDDP*HLRPLV
Trigger: CACCAGAGGTCTCAGATGGCAAGGATCATCTTGGTT...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CGCCCCATGGTGAGTCTGCACCCTTCCTGTGACAGATCCCCCAGCAGGCCACACTGGAACTGTGGAACCTaGAGCCATAGTTATTTGACT +
Preference number: 4 (lower is better)
Translates to: RPMVSLHPSCDRSPSRPHWNCGT*SHSYLT
Trigger: AGTCAAATAACTATGGCTGCAGGTTCCACAGTTCCA...GTGTGGCCTGCTGGGGGATCTGTCACAGGAAGGGTGCAGACTCACCATGGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCAGAAGCAAGAGTTGTaGAAAATGAGCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GSRVVGRPQSWFPNPHRLQKQEL*KMSLSA
Trigger: GGCCGACAAGCTCATTTTCCACAACTCTTGCTTCTG...AAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CCA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGCAGAAGCAAGAGTTGTaGAAAATGAGCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVQKQEL*KMSLSA
Trigger: GGCCGACAAGCTCATTTTCCACAACTCTTGCTTCTG...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGTCCTCCCTGTCTCCGTaGCTCAGAAACAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKSSLSP*LRNRLR
Trigger: CCTTAACCTGTTTCTGAGCCACGGAGACAGGGAGGA...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTCCTCCCTGTCTCCGTaGCTCAGAAACAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: CFCFCFSTLVVRDGPKPHSSLSP*LRNRLR
Trigger: CCTTAACCTGTTTCTGAGCCACGGAGACAGGGAGGA...GTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCACAATGGGGTGCATATGGTAAGTTGGTGGGTCTGAACCAACCCAGAACTGAGGCTGGTGGTTCGAGATaGTCCCAAGCCCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: SQWGAYGKLVGLNQPRTEAGGSR*SQAPLG
Trigger: CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGC...CTCAGTTCTGGGTTGGTTCAGACCCACCAACTTACCATATGCACCCCATTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGTTGGTCACAACAGGATaGGCACAAATGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PVSVAQKQVKGRGRWGDVLVTTG*AQMGAG
Trigger: CCCCGCTCCCATTTGTGCCCATCCTGTTGTGACCAA...CACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGTTGGTAGGGTCTTCCTaGCCCAGAGGACTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKLVGSS*PRGLPS
Trigger: TGAAGGAAGTCCTCTGGGCCAGGAAGACCCTACCAA...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCGGTCCTGGGGTGATCTaGCTGATACCATTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPGPGVI*LIPLSV
Trigger: GACTGACAATGGTATCAGCCAGATCACCCCAGGACC...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp AGGGGTCCTGGGGTGATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCAGTGCTTTCAGTTGTaGGGGGTGGAGGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RGPGVIWLIPLSVQRCLPQCFQL*GVEVGF
Trigger: AAAACCTACCTCCACCCCCCACAACTGAAAGCACTG...GGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGATCACCCCAGGACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GGATCTATTGAAACATGTTTAAAACGGGGTTGGTCACAACAGGATGGGCACAAAGACGGCGGCCCGGCGTaGGGAAGCAACGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSIETCLKRGWSQQDGHKDGGPA*GSNGGR
Trigger: CCTGCCACCGTTGCTTCCCCACGCCGGGCCGCCGTC...TTTGTGCCCATCCTGTTGTGACCAACCCCGTTTTAAACATGTTTCAATAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR TCA 90 bp CAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATTGCCCTGAGAGGCTCTaGGGCGCTCACTTCACACTT +
Preference number: 4 (lower is better)
Translates to: QLYGVVAANPPGVSVLIDCPERL*GAHFTL
Trigger: AAGTGTGAAGTGAGCGCCTCAGAGCCTCTCAGGGCA...ATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAATGGTGTGACAGTGCTTaGAGCAGAAGCAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEWCDSA*SRSKSC
Trigger: ACAACTCTTGCTTCTGCTGCAAGCACTGTCACACCA...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AGGGGTCCTGGGGTGATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCTTGCTCTTAAACAGCTaGTGGAAGTGGGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RGPGVIWLIPLSVQRCLPLLLNS*WKWGLQ
Trigger: CTGCAAACCCCACTTCCAGCAGCTGTTTAAGAGCAA...GGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGATCACCCCAGGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp TTAGGAACTCAGGCAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTTACCAGGGTGGCACTaGTGGCCCTCACAACCTGAA +
Preference number: 4 (lower is better)
Translates to: LGTQAVVWCGGSKPSRSLLPGWH*WPSQPE
Trigger: TTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAA...GAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGTTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp AGGGGTCCTGGGGTGATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCCTCCCATTTCTCAATaGTGTGTCAGGGAACTGACA +
Preference number: 4 (lower is better)
Translates to: RGPGVIWLIPLSVQRCLPPPISQ*CVRELT
Trigger: TGTCAGTTCCCTGACACACCATTGAGAAATGGGAGG...GGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGATCACCCCAGGACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAACAGGCCTCTTCACAATaGGGTGCATATGGTAAGTTG +
Preference number: 4 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEQASSQ*GAYGKL
Trigger: CAACTTACCATATGCACCCCATTGTGAAGAGGCCTG...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CTGAATTGTGGATCGTGCAGCCATGGTTATTGTGGAACTGTGGAACCTGCAGCCTTGGGCAGCACTTGCTaGGTCTGCTGGTTACCGCCA +
Preference number: 4 (lower is better)
Translates to: LNCGSCSHGYCGTVEPAALGSTC*VCWLPP
Trigger: TGGCGGTAACCAGCAGACCCAGCAAGTGCTGCCCAA...GGCTGCAGGTTCCACAGTTCCACAATAACCATGGCTGCACGATCCACAATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGAGGGGTCCTGTaGCAGTGCTTTCAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: VAANPPGVSVLIDPMSGDIRGVL*QCFQLW
Trigger: CCACAACTGAAAGCACTGCCACAGGACCCCTCTGAT...GTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp ATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCCTTTCCTCCAGTTGCGTAAGTTGGTGGGTCTaGACCAACCCAGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: IWLIPLSVQRCLPLSSSCVSWWV*TNPELR
Trigger: CCTCAGTTCTGGGTTGGTTCAGACCCACCAACTTAC...GCAACTGGAGGAAAGGGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp CCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGTGGTTTGCTCTGCTGTaGACTCATCCCTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: PVSVAQKQVKGRGRWGDVWFALL*THPSLS
Trigger: GGACAATGAGGGATGAGTTCACAGCAGAGCAAACCA...CACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp GTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACGAGACATCAGGAAGTTaGATCTGGAGCAGGACAACC +
Preference number: 4 (lower is better)
Translates to: VAANPPGVSVLIDPMSGDETSGS*IWSRTT
Trigger: GGTTGTCCTGCTCCAGATTCAACTTCCTGATGTCTC...GTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGTTAACCGAACCAAGATaGTCCTTGCCATCTGAGACC +
Preference number: 4 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKLTEPR*SLPSET
Trigger: GGTCTCAGATGGCAAGGATCATCTTGGTTCGGTTAA...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp TGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGTGTGACAGTGCTTaGAGCAGAAGCAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: CFCFCFSTLVVRDGPKPHWCDSA*SRSKSC
Trigger: ACAACTCTTGCTTCTGCTGCAAGCACTGTCACACCA...GTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCTTGCTCTTAAACAGCTaGTGGAAGTGGGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SAFASASPRWWFEMVPSPLLLNS*WKWGLQ
Trigger: CTGCAAACCCCACTTCCAGCAGCTGTTTAAGAGCAA...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGGAGTGCTTTTGCTTCTaGTTCTCCACGCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETECFCF*FSTLVV
Trigger: AACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACTC...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTTTGCCTGGTTTGCTCTaGTGTGAACTCATCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPLPGLL*CELIPH
Trigger: ATGAGGGATGAGTTCACAGCAGAGCAAACCAGGCAA...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CTGAGTATTCGCTCTGCTCCCTCGAGGAGCAGTGCCTGCCTCAGCATAGTGACTCAGAAGCAAGAGTTGTaGAAAATGAGCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LSIRSAPSRSSACLSIVTQKQEL*KMSLSA
Trigger: GGCCGACAAGCTCATTTTCCACAACTCTTGCTTCTG...AGTCACTATGCTGAGGCAGGCACTGCTCCTCGAGGGAGCAGAGCGAATACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTGGGCAGAAGCAAGAGTTGTaGAAAATGAGCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: HADSLLEKRHLDRGAGLGQKQEL*KMSLSA
Trigger: GGCCGACAAGCTCATTTTCCACAACTCTTGCTTCTG...CCCAAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CCA 90 bp TCACAATGGGGTGCATATGGTAAGTTGGTGGGTCTGAACCAACCCAGAACTGAGATGATGCCCAACAGGTaGCACTGTCGCGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SQWGAYGKLVGLNQPRTEMMPNR*HCRAPS
Trigger: GGAAGGAGCGCGACAGTGCCACCTGTTGGGCATCAT...CTCAGTTCTGGGTTGGTTCAGACCCACCAACTTACCATATGCACCCCATTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TGGTTACCGCCATTCTTCGCTAACTTACTTCCAGGTCAAAGGGCTGGGAAGAAGCCATCTCCTCCCCCATaGGCTGCAGGGGCATTTATG +
Preference number: 4 (lower is better)
Translates to: WLPPFFANLLPGQRAGKKPSPPP*AAGAFM
Trigger: CATAAATGCCCCTGCAGCCCATGGGGGAGGAGATGG...CTTCTTCCCAGCCCTTTGACCTGGAAGTAAGTTAGCGAAGAATGGCGGTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp GTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACATGTTTAAAACGGGGTTaGTCACAACAGGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: VAQKQVKGRGRWGDVGATCLKRG*SQQDGH
Trigger: GTGCCCATCCTGTTGTGACCAACCCCGTTTTAAACA...TGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000578402.5
CDS-3UTR CCA 90 bp ACTCAGGCAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTACTTGCTGGGTCTGCTaGTTACCGCCATTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: TQAVVWCGGSKPSRSLCSTCWVC*LPPFFA
Trigger: AGCGAAGAATGGCGGTAACCAGCAGACCCAGCAAGT...AGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCAGATAAAAAGTTGTaGGGCTTCAGGGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: QKQVKGRGRWGDVGATQSPDKKL*GFRVTW
Trigger: CCAGGTCACCCTGAAGCCCCACAACTTTTTATCTGG...AGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp GTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACTTCCCGGAGCTTTCATaGTATTTGGTAGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VAANPPGVSVLIDPMSGDFPELS*YLVGSS
Trigger: GGAAGACCCTACCAAATATCATGAAAGCTCCGGGAA...GTCTCCAGACATGGGATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp ACTCAGGCAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCTCTATGTCTGTGTCTaGATTGTGGATCGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TQAVVWCGGSKPSRSLCSLYVCV*IVDRAA
Trigger: GGCTGCACGATCCACAATTCAGACACAGACATAGAG...AGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTTGCTCTTAAACAGCTaGTGGAAGTGGGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETLLLNS*WKWGLQ
Trigger: CTGCAAACCCCACTTCCAGCAGCTGTTTAAGAGCAA...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR GCA 90 bp GGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGGAAGTTGAATCTGTCCTCCCCCATGGGCTaGAGGGGCATTTATGATGCC +
Preference number: 4 (lower is better)
Translates to: GVSVLIDPMSGDIRKLNLSSPMG*RGIYDA
Trigger: GGCATCATAAATGCCCCTGCAGCCCATGGGGGAGGA...CAGATTCAACTTCCTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp AGAGCCACCTCTCCAGTACCCCCTTGTGGTCATCTGCTACTGTTGCTTAACCGATCGAGGAGCAGTGCCTaGCTCAGCATAGTGACTTAT +
Preference number: 4 (lower is better)
Translates to: RATSPVPPCGHLLLLLNRSRSSA*LSIVTY
Trigger: ATAAGTCACTATGCTGAGGCAGGCACTGCTCCTCGA...TCGGTTAAGCAACAGTAGCAGATGACCACAAGGGGGTACTGGAGAGGTGGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp ACAATAAAAGGGATCATTTATATCAGAGGGGTCCTGTGGCAGTGCTTTCAGTTGAGGGGCCAGGTATGGTaGCTGGCAACGAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TIKGIIYIRGVLWQCFQLRGQVW*LATSLG
Trigger: GCCCAGGCTCGTTGCCAGGCACCATACCTGGCCCCT...CAACTGAAAGCACTGCCACAGGACCCCTCTGATATAAATGATCCCTTTTATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp GGATCTATTGAAACATGTTTAAAACGGGGTTGGTCACAACAGGATGGGCACAAAGCCCAGAGCTCCTTGTaGTGCTTGCGGCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: GSIETCLKRGWSQQDGHKAQSSL*CLRPNP
Trigger: GGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGC...TTTGTGCCCATCCTGTTGTGACCAACCCCGTTTTAAACATGTTTCAATAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000578402.5
CDS-3UTR GCA 90 bp TGGTTACCGCCATTCTTCGCTAACTTACTTCCAGGTCAAAGGGCTGGGAAGAAGGTGGAGGTAGGTTTTTaGTTAGCAGGGGCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: WLPPFFANLLPGQRAGKKVEVGF*LAGARY
Trigger: ATACCTGGCCCCTGCTAAGCAAAAACCTACCTCCAC...CTTCTTCCCAGCCCTTTGACCTGGAAGTAAGTTAGCGAAGAATGGCGGTAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp ACAATAAAAGGGATCATTTATATCAGAGGGGTCCTGTGGCAGTGCTTTCAGTTGCAGGAAGCAGGGTGGTaGGCAGACCCCAATCCTGGT +
Preference number: 4 (lower is better)
Translates to: TIKGIIYIRGVLWQCFQLQEAGW*ADPNPG
Trigger: ACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCTG...CAACTGAAAGCACTGCCACAGGACCCCTCTGATATAAATGATCCCTTTTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp CTGAATTGTGGATCGTGCAGCCATGGTTATTGTGGAACTGTGGAACCTGCAGCCTGTTTAAAACGGGGTTaGTCACAACAGGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: LNCGSCSHGYCGTVEPAACLKRG*SQQDGH
Trigger: GTGCCCATCCTGTTGTGACCAACCCCGTTTTAAACA...GGCTGCAGGTTCCACAGTTCCACAATAACCATGGCTGCACGATCCACAATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CCA 90 bp TCACAATGGGGTGCATATGGTAAGTTGGTGGGTCTGAACCAACCCAGAACTGAGCAGCCATGGTTATTGTaGAACTGTGGAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQWGAYGKLVGLNQPRTEQPWLL*NCGTCS
Trigger: GCTGCAGGTTCCACAGTTCCACAATAACCATGGCTG...CTCAGTTCTGGGTTGGTTCAGACCCACCAACTTACCATATGCACCCCATTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp TGGTTACCGCCATTCTTCGCTAACTTACTTCCAGGTCAAAGGGCTGGGAAGAAGTGGTGTGACAGTGCTTaGAGCAGAAGCAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: WLPPFFANLLPGQRAGKKWCDSA*SRSKSC
Trigger: ACAACTCTTGCTTCTGCTGCAAGCACTGTCACACCA...CTTCTTCCCAGCCCTTTGACCTGGAAGTAAGTTAGCGAAGAATGGCGGTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATCTGAATTGTGGATCGTaGAGCCATGGTTATTGTGGA +
Preference number: 4 (lower is better)
Translates to: QLYGVVAANPPGVSVLIDLNCGS*SHGYCG
Trigger: TCCACAATAACCATGGCTGCACGATCCACAATTCAG...ATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp ACAATAAAAGGGATCATTTATATCAGAGGGGTCCTGTGGCAGTGCTTTCAGTTGAGGCTGAGCTTGGTGTaGCAGTGCTTGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TIKGIIYIRGVLWQCFQLRLSLV*QCLQQK
Trigger: CTTCTGCTGCAAGCACTGTCACACCAAGCTCAGCCT...CAACTGAAAGCACTGCCACAGGACCCCTCTGATATAAATGATCCCTTTTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR TCA 90 bp GGATCTATTGAAACATGTTTAAAACGGGGTTGGTCACAACAGGATGGGCACAAAAACGTCACCAGTGGCTaGGTTCCCGGAGCTTTCATG +
Preference number: 4 (lower is better)
Translates to: GSIETCLKRGWSQQDGHKNVTSG*VPGAFM
Trigger: CATGAAAGCTCCGGGAACTCAGCCACTGGTGACGTT...TTTGTGCCCATCCTGTTGTGACCAACCCCGTTTTAAACATGTTTCAATAGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp GGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGGAAGTTGAATCTGCCCCTTGTGGTCATCTaGTACTGTTGCTTAACCGAA +
Preference number: 4 (lower is better)
Translates to: GVSVLIDPMSGDIRKLNLPLVVI*YCCLTE
Trigger: TTCGGTTAAGCAACAGTAGCAGATGACCACAAGGGG...CAGATTCAACTTCCTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR GCA 90 bp CAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTCATCGATAAGCCAGGCCAGTGTTaGGCATTACTTACAATAAAA +
Preference number: 4 (lower is better)
Translates to: QLYGVVAANPPGVSVLIDKPGQC*ALLTIK
Trigger: TTTTATTGTAAGTAATGCGCAACACTGGCCTGGCTT...ATCGATGAGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS CCA 90 bp CAGGCTGCGGCGGCTGCGGTCGCGGGACACTGGGCGCTCCCGGCCTaGCTCCGGGATAACCGGGCGGGGCCTGGGCCATTCACTGCCTCG +
Preference number: 5 (lower is better)
Translates to: QAAAAAVAGHWALPA*LRDNRAGPGPFTAS
Trigger: CGAGGCAGTGAATGGCCCAGGCCCCGCCCGGTTATCCCGGAGCCAGGCCGGGAGCGCCCAGTGTCCCGCGACCGCAGCCGCCGCAGCCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS CCA 90 bp CACAGCAGGCCGGAGGCACAGCCGGCGAGAGACGGCCACTCGCTTTaGAGCGGCGGCGAGGCCGGCGCCTTCCCGGGCACCAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: HSRPEAQPARDGHSL*SGGEAGAFPGTRDC
Trigger: GCAGTCCCTGGTGCCCGGGAAGGCGCCGGCCTCGCCGCCGCTCCAAAGCGAGTGGCCGTCTCTCGCCGGCTGTGCCTCCGGCCTGCTGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584645.1
CDS CCA 90 bp GCCGTCTGCCCATCCCGACGGCGGCCCGGCGTGGGGAAGCAACGGTaGCAGGGACAGGATGGAAGGGCCGCGCTCCGCATCCTACTGGGA +
Preference number: 5 (lower is better)
Translates to: AVCPSRRRPGVGKQR*QGQDGRAALRILLG
Trigger: TCCCAGTAGGATGCGGAGCGCGGCCCTTCCATCCTGTCCCTGCCACCGTTGCTTCCCCACGCCGGGCCGCCGTCGGGATGGGCAGACGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS-3UTR CAA 90 bp CCTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCTCGGTTTCCCCCGGTaGGCCTCGCGCGTAGGCGCC +
Preference number: 5 (lower is better)
Translates to: PSHLAPTQAQLDLLPTFPLGFPR*ASRVGA
Trigger: GGCGCCTACGCGCGAGGCCAACCGGGGGAAACCGAG...GGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS CCA 90 bp CTCCTGCAGCCTGGAACATGGCTCGTTGGAGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGGGTTCAGGCCCGGCCTGGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: LLQPGTWLVGGGSLG*RSGTRWVQARPGPR
Trigger: CCGCGGCCCAGGCCGGGCCTGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578993.5
ENST00000579814.1
ENST00000583211.5
CDS CCA 90 bp GTGGCCTGGGCGGCTCCTGCAGCCTGGAACATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAGCGGCACCCGCTGGGTTCAGGCCCG +
Preference number: 5 (lower is better)
Translates to: VAWAAPAAWNMARWR*KPRVEKRHPLGSGP
Trigger: CGGGCCTGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578993.5
ENST00000579814.1
ENST00000583211.5
CDS CCA 90 bp TGGCTCGTTGGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCGCTaGGTTCTGCAAGGGGAAGTCAGTCGGGAGGGCCCCGCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: WLVGGGSLGWRSGTR*VLQGEVSREGPASP
Trigger: CGGGCTGGCGGGGCCCTCCCGACTGACTTCCCCTTGCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578067.5
ENST00000578402.5
ENST00000580222.5
CDS CCA 90 bp GTGGCCTGGGCGGCTCCTGCAGCCTGGAACATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAGCGGCACCCGCTGGGTTCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: VAWAAPAAWNMARWR*KPRVEKRHPLGSGP
Trigger: GGGGCCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578061.5
CDS CCA 90 bp GGCCATGAGAGGGGGTGGCCTGGGCGGCTCCTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: GHERGWPGRLLQPGT*LVGGGSLGWRSGTR
Trigger: GCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580222.5
ENST00000583211.5
CDS CCA 90 bp GAGGGGGTGGCCTGGGCGGCTCCTGCAGCCTGGAACATGGCTCGTTaGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCGCTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: EGVAWAAPAAWNMAR*RWKPRVEKRHPLGS
Trigger: TGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCACCCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578993.5
ENST00000579814.1
ENST00000583211.5
CDS CCA 90 bp CGTCATGAGAGGGGGTGGCCTGGGCGGCTCCTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: RHERGWPGRLLQPGT*LVGGGSLGWRSGTR
Trigger: GCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000584645.1
CDS CCA 90 bp GAGGGGGTGGCCTGGGCGGCTCCTGCAGCCTGGAACATGGCTCGTTaGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: EGVAWAAPAAWNMAR*RWKPRVEKRHPLGS
Trigger: AGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCACCCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000578061.5
ENST00000578067.5
ENST00000578402.5
ENST00000579329.1
ENST00000580222.5
ENST00000584645.1
CDS CCA 90 bp CTCCTGCAGCCTGGAACATGGCTCGTTGGAGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGGGTTCTGGCCCCGCGAGGACCGGAC +
Preference number: 5 (lower is better)
Translates to: LLQPGTWLVGGGSLG*RSGTRWVLAPRGPD
Trigger: GTCCGGTCCTCGCGGGGCCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578061.5
CDS-3UTR CAA 90 bp TGGGGAGACGTGGGGGCCACACAGTCTCCGGTGGCAGTGAGGGAGCTTGGGACCCCGGGGTCCACCTCCTaGTGGGCCCAGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: WGDVGATQSPVAVRELGTPGSTS*WAQSSL
Trigger: CAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGG...GGTCCCAAGCTCCCTCACTGCCACCGGAGACTGTGTGGCCCCCACGTCTCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS TCA 90 bp TCTTCTGGCAGGCGGCGCAGGTCTCCTTCACCTGGGCCCGCAGGCTaGAGGACTGTGCGGGAAGCTCAGCCAGGTGCTGCCCCAGTGCTC +
Preference number: 5 (lower is better)
Translates to: SSGRRRRSPSPGPAG*RTVREAQPGAAPVL
Trigger: GAGCACTGGGGCAGCACCTGGCTGAGCTTCCCGCACAGTCCTTCAGCCTGCGGGCCCAGGTGAAGGAGACCTGCGCCGCCTGCCAGAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578067.5
ENST00000578297.1
ENST00000579329.1
ENST00000579814.1
CDS CCA 90 bp GTGGCCTGGGCGGCTCCTGCAGCCTGGAACATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAGCGGCACCCGCTGGGTTCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: VAWAAPAAWNMARWR*KPRVEKRHPLGSAR
Trigger: CCTTGCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578067.5
ENST00000578402.5
ENST00000579329.1
ENST00000580222.5
CDS-3UTR CAA 90 bp GGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGCCTCAGGCCGTCTaGGTGCCGGGGTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GWWADPNPGFQTLTGCGRRPQAV*VPGSTS
Trigger: GGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCT...TCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCCAGGCCTCAGGCCGTCTaGGTGCCGGGGTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: AGWWADPNPGFQTLTGFPRPQAV*VPGSTS
Trigger: GGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCT...GGGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS TCA 90 bp GGGTTCTCATTTCTCACGTGGGAGCCGCGGCCCAGAGAGCTGAGGTaGCAGAGCTTGGGCCGCAGAGCTGCTCCCTCCCTGCAGCCGCAC +
Preference number: 5 (lower is better)
Translates to: GFSFLTWEPRPRELR*QSLGRRAAPSLQPH
Trigger: GTGCGGCTGCAGGGAGGGAGCAGCTCTGCGGCCCAAGCTCTGTCACCTCAGCTCTCTGGGCCGCGGCTCCCACGTGAGAAATGAGAACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584645.1
CDS TCA 90 bp CCGCTGGGTTCTCATTTCTCACGTGGGAGCCGCGGCCCAGAGAGCTaGGGTGACAGAGCTTGGGCCGCAGAGCTGCTCCCTCCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PLGSHFSRGSRGPES*GDRAWAAELLPPCS
Trigger: GCTGCAGGGAGGGAGCAGCTCTGCGGCCCAAGCTCTGTCACCTCAGCTCTCTGGGCCGCGGCTCCCACGTGAGAAATGAGAACCCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584645.1
CDS CCA 90 bp ATGAGCTTGTCGGCCACCAGCCGCTCCATGGGGTACACGGTCTTCTaGCAGGCGGCGCAGGTCTCCTTCACCTGGGCCCGCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: MSLSATSRSMGYTVF*QAAQVSFTWARRLK
Trigger: CTTCAGCCTGCGGGCCCAGGTGAAGGAGACCTGCGCCGCCTGCCAGAAGACCGTGTACCCCATGGAGCGGCTGGTGGCCGACAAGCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000582055.1
ENST00000583211.5
ENST00000584645.1
CDS CCA 90 bp TTACATGAGAGGGGGTGGCCTGGGCGGCTCCTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: LHERGWPGRLLQPGT*LVGGGSLGWRSGTR
Trigger: GCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCACCCCCTCTCATGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578297.1
CDS GCA 90 bp TCCGCAGAGGGGGTGGAAGGTTACAGAGGCCTCAGGCCGTCTTGGTaGCGGGGTCCACCTCCTTGTGGGCCCAGAGCTCCTTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SAEGVEGYRGLRPSW*RGPPPCGPRAPCAA
Trigger: AGCAGCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCTCTGTAACCTTCCACCCCCTCTGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000582055.1
ENST00000583211.5
CDS CCA 90 bp CCTTCCGCAGAGGGGGTGGAAGGTTACAGAGGCCTCAGGCCGTCTTaGTGCCGGGGTCCACCTCCTTGTGGGCCCAGAGCTCCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: PSAEGVEGYRGLRPS*CRGPPPCGPRAPCA
Trigger: AGCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCTCTGTAACCTTCCACCCCCTCTGCGGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000582055.1
ENST00000583211.5
CDS CCA 90 bp GTGGCCTGGGCGGCTCCTGCAGCCTGGAACATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAGCGGCACCCGCTGGGTTCTCATTTC +
Preference number: 5 (lower is better)
Translates to: VAWAAPAAWNMARWR*KPRVEKRHPLGSHF
Trigger: GAAATGAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584645.1
CDS-3UTR CAA 90 bp GCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCCCGCAGGCTGAAGGACTaGGAGCGCTGCACCGTGCTG +
Preference number: 5 (lower is better)
Translates to: AGWWADPNPGFQTLTGFPRRLKD*ERCTVL
Trigger: CAGCACGGTGCAGCGCTCCAAGTCCTTCAGCCTGCG...GGGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CAA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCTTGTGGAAAATGAGCTaGTCGGCCACCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPLWKMS*SATSRS
Trigger: GGAGCGGCTGGTGGCCGACAAGCTCATTTTCCACAA...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGCCGGGGTCCACCTCCTaGTGGGCCCAGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KQGGGQTPILVSKPSPAAPGSTS*WAQSSL
Trigger: CAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGG...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS GCA 90 bp GTTTGCAGTAGAACTCCCCGTGCAGCGCGGCGTAGCTGCCCAGGCTaGAGAAGCCAAACAACGGCGTCAGGTCAGGTCAGGTCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VCSRTPRAARRSCPG*RSQTTASGQVRSGL
Trigger: CAGCCCCGACCTGACCTGACCTGACGCCGTTGTTTGGCTTCTGCAGCCTGGGCAGCTACGCCGCGCTGCACGGGGAGTTCTACTGCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579329.1
CDS CCA 90 bp CTCCTGCAGCCTGGAACATGGCTCGTTGGAGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGGGTTCTGCAAGGGGAAGTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: LLQPGTWLVGGGSLG*RSGTRWVLQGEVSR
Trigger: CCGACTGACTTCCCCTTGCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578067.5
ENST00000578402.5
ENST00000580222.5
CDS-3UTR CAA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGCGCAGGCTGAAGGACTaGGAGCGCTGCACCGTGCTG +
Preference number: 5 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRRRLKD*ERCTVL
Trigger: CAGCACGGTGCAGCGCTCCAAGTCCTTCAGCCTGCG...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAAGCTCCTTGTGCTGCTaGCGGCCAAACCCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGSSLCC*RPNPSS
Trigger: CGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCT...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGACCGGGGTCCACCTCCTaGTGGGCCCAGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRPGSTS*WAQSSL
Trigger: CAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGG...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGCCGGGGTCCACCTCCTaGTGGGCCCAGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKPGSTS*WAQSSL
Trigger: CAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGG...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCCGGGGTCCACCTCCTaGTGGGCCCAGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KQGGGQTPILVSKPSPASPGSTS*WAQSSL
Trigger: CAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGG...GGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS GCA 90 bp GGAAGTGGGGTTTGCAGTAGAACTCCCCGTGCAGCGCGGCGTAGCTaGCCAGGCTGCAGAAGCCAAACAACGGCGTCAGGTCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GSGVCSRTPRAARRS*PGCRSQTTASGQVR
Trigger: CCTGACCTGACCTGACGCCGTTGTTTGGCTTCTGCAGCCTGGGCAGCTACGCCGCGCTGCACGGGGAGTTCTACTGCAAACCCCACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579329.1
CDS CCA 90 bp CTCCTGCAGCCTGGAACATGGCTCGTTGGAGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGGGTTCTCATTTCTCACGTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LLQPGTWLVGGGSLG*RSGTRWVLISHVGA
Trigger: GGCTCCCACGTGAGAAATGAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584645.1
CDS-3UTR CAA 90 bp GCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCCCTGGAACATGGCTCGTaGGAGGTGGAAGCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: AGWWADPNPGFQTLTGFPLEHGS*EVEASG
Trigger: ACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAG...GGGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CAA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGCGCAGGCTGAAGGACTaGGAGCGCTGCACCGTGCTG +
Preference number: 5 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGRRLKD*ERCTVL
Trigger: CAGCACGGTGCAGCGCTCCAAGTCCTTCAGCCTGCG...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp AGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTTCCCAGCTCCTTGTGCTGCTaGCGGCCAAACCCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: SRVVGRPQSWFPNPHRLPSSLCC*RPNPSS
Trigger: CGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCT...GGGAAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580222.5
CDS-3UTR CAA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCCGGGGTCCACCTCCTaGTGGGCCCAGAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKPGSTS*WAQSSL
Trigger: CAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGG...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGAGGCCTCAGGCCGTCTaGGTGCCGGGGTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKRPQAV*VPGSTS
Trigger: GGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCT...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTAGGCCTCAGGCCGTCTaGGTGCCGGGGTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLRPQAV*VPGSTS
Trigger: GGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCT...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CAA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTAGGCCTCAGGCCGTCTaGGTGCCGGGGTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPRPQAV*VPGSTS
Trigger: GGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCT...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAAGGCCTCAGGCCGTCTaGGTGCCGGGGTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: DPNPGFQTLTGCGRRKKERPQAV*VPGSTS
Trigger: GGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCT...TTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAACGCAGGCTGAAGGACTaGGAGCGCTGCACCGTGCTG +
Preference number: 5 (lower is better)
Translates to: GRPQSWFPNPHRLREKEERRLKD*ERCTVL
Trigger: CAGCACGGTGCAGCGCTCCAAGTCCTTCAGCCTGCG...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGAGCTCCTTGTGCTGCTaGCGGCCAAACCCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVSSLCC*RPNPSS
Trigger: CGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCT...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGCTCCTTGTGCTGCTaGCGGCCAAACCCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRSSLCC*RPNPSS
Trigger: CGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCT...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGTGGGCCCAGAGCTCCTaGTGCTGCTTGCGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVWAQSS*CCLRPN
Trigger: GTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGCCCA...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGACTCTGGTGCAGGAAGTaGGCCTGCCCTGAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: GQTPILVSKPSPAAGEGRLWCRK*ACPERL
Trigger: GAGCCTCTCAGGGCAGGCCAACTTCCTGCACCAGAG...TCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGCTGGAACATGGCTCGTaGGAGGTGGAAGCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKLEHGS*EVEASG
Trigger: ACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAG...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp TGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGTTGTGGAAAATGAGCTaGTCGGCCACCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: WWADPNPGFQTLTGCGRRLWKMS*SATSRS
Trigger: GGAGCGGCTGGTGGCCGACAAGCTCATTTTCCACAA...CCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp CTTCCCACCTGGCCCCCACGCAAGCCCAGCTCGACCTCCTTCCCACCTTCCCCCCAGCAGAAGCAAGAGTaGTGGAAAATGAGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: LPTWPPRKPSSTSFPPSPQQKQE*WKMSLS
Trigger: CGACAAGCTCATTTTCCACAACTCTTGCTTCTGCTG...GGGGGAAGGTGGGAAGGAGGTCGAGCTGGGCTTGCGTGGGGGCCAGGTGGGAAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GATTTACCAGGGTGGCACTGCTGGCCCTCACAACCTGAACGTCACCAGTGGCTGTGGGCCCAGAGCTCCTaGTGCTGCTTGCGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: DLPGWHCWPSQPERHQWLWAQSS*CCLRPN
Trigger: GTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGCCCA...CAGCCACTGGTGACGTTCAGGTTGTGAGGGCCAGCAGTGCCACCCTGGTAAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp GCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGTGGGCCCAGAGCTCCTaGTGCTGCTTGCGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: ADPNPGFQTLTGCGRRKKWAQSS*CCLRPN
Trigger: GTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGCCCA...CTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp CAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGGGCATGCTGACTCCTaGCTGGAGAAAAGGCACCTA +
Preference number: 5 (lower is better)
Translates to: QGGGQTPILVSKPSPAAGGHADS*LEKRHL
Trigger: TAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC...TCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp TCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTGCGCTCACTTCACACTaGGGAGGATCCAGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SWFPNPHRLREKEEGRSPALTSH*GGSRPG
Trigger: CCCCGGCCTGGATCCTCCCAAGTGTGAAGTGAGCGC...AGGACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp CTGAGTATTCGCTCTGCTCCCTCGAGGAGCAGTGCCTGCCTCAGCATAGTGACTGCCCCTTTCCTCCAGTaGCCCCTCCAGGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LSIRSAPSRSSACLSIVTAPFLQ*PLQELH
Trigger: GTGGAGCTCCTGGAGGGGCAACTGGAGGAAAGGGGC...AGTCACTATGCTGAGGCAGGCACTGCTCCTCGAGGGAGCAGAGCGAATACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp AATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCGCAGGCTGAAGGACTaGGAGCGCTGCACCGTGCTG +
Preference number: 5 (lower is better)
Translates to: NPGFQTLTGCGRRKKEGVRRLKD*ERCTVL
Trigger: CAGCACGGTGCAGCGCTCCAAGTCCTTCAGCCTGCG...GACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGTTGTGGAAAATGAGCTaGTCGGCCACCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGLWKMS*SATSRS
Trigger: GGAGCGGCTGGTGGCCGACAAGCTCATTTTCCACAA...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp ACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGAGCTCCTTGTGCTGCTaGCGGCCAAACCCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: TPILVSKPSPAAGEGRRKSSLCC*RPNPSS
Trigger: CGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCT...CTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAAGCTCCTTGTGCTGCTaGCGGCCAAACCCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: DPNPGFQTLTGCGRRKKESSLCC*RPNPSS
Trigger: CGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCT...TTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTTGGGCCCAGAGCTCCTaGTGCTGCTTGCGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLWAQSS*CCLRPN
Trigger: GTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGCCCA...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CAA 90 bp TGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACCTGGAACATGGCTCGTaGGAGGTGGAAGCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: CFCFCFSTLVVRDGPKPHLEHGS*EVEASG
Trigger: ACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAG...GTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGCCCAGAGCTCCTaGTGCTGCTTGCGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETWAQSS*CCLRPN
Trigger: GTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGCCCA...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp TTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCACTGGGGGGGCATGCTGACTCCTaGCTGGAGAAAAGGCACCTA +
Preference number: 5 (lower is better)
Translates to: LLLLLHAGGSRWSQAPLGGHADS*LEKRHL
Trigger: TAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC...CCCCAGTGGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGGGCATGCTGACTCCTaGCTGGAGAAAAGGCACCTA +
Preference number: 5 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAGHADS*LEKRHL
Trigger: TAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CAA 90 bp CAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTCCGGTGGGGCATGCTGACTCCTaGCTGGAGAAAAGGCACCTA +
Preference number: 5 (lower is better)
Translates to: QVKGRGRWGDVGATQSPVGHADS*LEKRHL
Trigger: TAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC...CACCGGAGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp AAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGTGCAGCCATGGTTATaGTGGAACTGTGGAACCTGC +
Preference number: 5 (lower is better)
Translates to: KQGGGQTPILVSKPSPAAVQPWL*WNCGTC
Trigger: GCAGGTTCCACAGTTCCACAATAACCATGGCTGCAC...CGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp AATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAAGGAAGGAGTCCTGGAACATGGCTCGTaGGAGGTGGAAGCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: NPGFQTLTGCGRRKKEGVLEHGS*EVEASG
Trigger: ACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAG...GACTCCTTCCTTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000578993.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GGGCATGCTGACTCCTTGCTGGAGAAAAGGCACCTAGATAGGGGAGCTGGGCTTTTGTGGAAAATGAGCTaGTCGGCCACCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GHADSLLEKRHLDRGAGLLWKMS*SATSRS
Trigger: GGAGCGGCTGGTGGCCGACAAGCTCATTTTCCACAA...AAGCCCAGCTCCCCTATCTAGGTGCCTTTTCTCCAGCAAGGAGTCAGCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGACAGCAGAAGCAAGAGTaGTGGAAAATGAGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: GWWADPNPGFQTLTGCGRQQKQE*WKMSLS
Trigger: CGACAAGCTCATTTTCCACAACTCTTGCTTCTGCTG...TCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp AGGGGTCCTGGGGTGATCTGGCTGATACCATTGTCAGTCCAGAGGTGTCTGCCCTCAGGTCCTCCCAACTaGCCTGGTTTGCTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: RGPGVIWLIPLSVQRCLPSGPPN*PGLLCC
Trigger: ACAGCAGAGCAAACCAGGCAAGTTGGGAGGACCTGA...GGGCAGACACCTCTGGACTGACAATGGTATCAGCCAGATCACCCCAGGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp CGCCCCATGGTGAGTCTGCACCCTTCCTGTGACAGATCCCCCAGCAGGCCACACAATCCAGATAAAAAGTaGTGGGGCTTCAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: RPMVSLHPSCDRSPSRPHNPDKK*WGFRVT
Trigger: GGTCACCCTGAAGCCCCACAACTTTTTATCTGGATT...GTGTGGCCTGCTGGGGGATCTGTCACAGGAAGGGTGCAGACTCACCATGGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAACCCAACTTGCCTGGTTaGCTCTGCTGTGAACTCATC +
Preference number: 5 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEPNLPG*LCCELI
Trigger: GATGAGTTCACAGCAGAGCAAACCAGGCAAGTTGGG...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp CTGAGTATTCGCTCTGCTCCCTCGAGGAGCAGTGCCTGCCTCAGCATAGTGACTGGTGGAGGTAGGTTTTaGCTTAGCAGGGGCCAGGTA +
Preference number: 5 (lower is better)
Translates to: LSIRSAPSRSSACLSIVTGGGRF*LSRGQV
Trigger: TACCTGGCCCCTGCTAAGCAAAAACCTACCTCCACC...AGTCACTATGCTGAGGCAGGCACTGCTCCTCGAGGGAGCAGAGCGAATACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS TCA 90 bp GCTTGGTGTGACAGTGCTTGCAGCAGAAGCAAGAGTTGTGGAAAATaGGCTTGTCGGCCACCAGCCGCTCCATGGGGTACACGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: AWCDSACSRSKSCGK*ACRPPAAPWGTRSS
Trigger: AGAAGACCGTGTACCCCATGGAGCGGCTGGTGGCCGACAAGCTCATTTTCCACAACTCTTGCTTCTGCTGCAAGCACTGTCACACCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000582055.1
ENST00000583211.5
ENST00000584645.1
CDS-3UTR CAA 90 bp ACTCAGGCAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTTTGTGGAAAATGAGCTaGTCGGCCACCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TQAVVWCGGSKPSRSLCSLWKMS*SATSRS
Trigger: GGAGCGGCTGGTGGCCGACAAGCTCATTTTCCACAA...AGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp TGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGCAGCAGAAGCAAGAGTaGTGGAAAATGAGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: WADPNPGFQTLTGCGRRKQQKQE*WKMSLS
Trigger: CGACAAGCTCATTTTCCACAACTCTTGCTTCTGCTG...CTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp AGGAAGCAGGGTGGTGGGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTCAGCAGAAGCAAGAGTaGTGGAAAATGAGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: RKQGGGQTPILVSKPSPAQQKQE*WKMSLS
Trigger: CGACAAGCTCATTTTCCACAACTCTTGCTTCTGCTG...AGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCCCACCACCCTGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000580222.5
ENST00000583211.5
CDS-3UTR CAA 90 bp GGCAGACCCCAATCCTGGTTTCCAAACCCTCACCGGCTGCGGGAGAAGGAAGAACAGCAGAAGCAAGAGTaGTGGAAAATGAGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: GRPQSWFPNPHRLREKEEQQKQE*WKMSLS
Trigger: CGACAAGCTCATTTTCCACAACTCTTGCTTCTGCTG...TTCTTCCTTCTCCCGCAGCCGGTGAGGGTTTGGAAACCAGGATTGGGGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578402.5
ENST00000583211.5
CDS-3UTR CAA 90 bp CAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTGGTGCATATGGTAAGTaGGTGGGTCTGAACCAACCC +
Preference number: 5 (lower is better)
Translates to: QKQVKGRGRWGDVGATQSGAYGK*VGLNQP
Trigger: GGGTTGGTTCAGACCCACCAACTTACCATATGCACC...AGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp GGAGTCTCTGTTCTCATCGATCCCATGTCTGGAGACATCAGGAAGTTGAATCTGCTGGAACATGGCTCGTaGGAGGTGGAAGCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: GVSVLIDPMSGDIRKLNLLEHGS*EVEASG
Trigger: ACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAG...CAGATTCAACTTCCTGATGTCTCCAGACATGGGATCGATGAGAACAGAGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp CAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGTGGGGGCCACACAGTCTATGTTTAAAACGGGGTaGGTCACAACAGGATGGGCA +
Preference number: 5 (lower is better)
Translates to: QKQVKGRGRWGDVGATQSMFKTG*VTTGWA
Trigger: TGCCCATCCTGTTGTGACCAACCCCGTTTTAAACAT...AGACTGTGTGGCCCCCACGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000259006.8
ENST00000578402.5
CDS-3UTR CAA 90 bp TCCCTGTCTCCGTGGCTCAGAAACAGGTTAAGGGTAGAGGTAGATGGGGAGACGGGTCATCTGCTACTGTaGCTTAACCGAACCAAGATG +
Preference number: 5 (lower is better)
Translates to: SLSPWLRNRLRVEVDGETGHLLL*LNRTKM
Trigger: CATCTTGGTTCGGTTAAGCAACAGTAGCAGATGACC...CGTCTCCCCATCTACCTCTACCCTTAACCTGTTTCTGAGCCACGGAGACAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp CTGAATTGTGGATCGTGCAGCCATGGTTATTGTGGAACTGTGGAACCTGCAGCCCTCTCCAGTACCCCCTaGTGGTCATCTGCTACTGTT +
Preference number: 5 (lower is better)
Translates to: LNCGSCSHGYCGTVEPAALSSTP*WSSATV
Trigger: AACAGTAGCAGATGACCACAAGGGGGTACTGGAGAG...GGCTGCAGGTTCCACAGTTCCACAATAACCATGGCTGCACGATCCACAATTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp ACTCAGGCAGTTGTATGGTGTGGTGGCAGCAAACCCTCCAGGAGTCTCTGTTCTATCTGGCTGATACCATaGTCAGTCCAGAGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: TQAVVWCGGSKPSRSLCSIWLIP*SVQRCL
Trigger: CAGACACCTCTGGACTGACAATGGTATCAGCCAGAT...AGAACAGAGACTCCTGGAGGGTTTGCTGCCACCACACCATACAACTGCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp AGTGCTTTTGCTTCTGCTTCTCCACGCTGGTGGTTCGAGATGGTCCCAAGCCCCAAAGCCAGGCCAGTGTaGCGCATTACTTACAATAAA +
Preference number: 5 (lower is better)
Translates to: SAFASASPRWWFEMVPSPKARPV*RITYNK
Trigger: TTTATTGTAAGTAATGCGCAACACTGGCCTGGCTTT...GGGGCTTGGGACCATCTCGAACCACCAGCGTGGAGAAGCAGAAGCAAAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp CTGAATTGTGGATCGTGCAGCCATGGTTATTGTGGAACTGTGGAACCTGCAGCCATGTCTGTGTCTGAATaGTGGATCGTGCAGCCATGG +
Preference number: 5 (lower is better)
Translates to: LNCGSCSHGYCGTVEPAAMSVSE*WIVQPW
Trigger: CCATGGCTGCACGATCCACAATTCAGACACAGACAT...GGCTGCAGGTTCCACAGTTCCACAATAACCATGGCTGCACGATCCACAATTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS-3UTR CAA 90 bp AGGCCACACAATAGAGAATCTGGATCTATTGAAACATGTTTAAAACGGGGTTGGCAAGCAGAAGAGAACTaGACTCCAAGTAGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: RPHNRESGSIETCLKRGWQAEEN*TPSRGV
Trigger: GACCCCTCTACTTGGAGTCAAGTTCTCTTCTGCTTG...CCAACCCCGTTTTAAACATGTTTCAATAGATCCAGATTCTCTATTGTGTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259006.8
CDS TCA 72 bp AGCGGGTCTCGGCTCCGCCCAGCCGGGGGCCGGCCCTaGAACGAGGACTCGAGCCTGTGCGCCCCGGGCGAG +
Preference number: 6 (lower is better)
Translates to: SGSRLRPAGGRP*NEDSSLCAPGE
Trigger: CTCGCCCGGGGCGCACAGGCTCGAGTCCTCGTTTCAGGGCCGGCCCCCGGCTGGGCGGAGCCGAGACCCGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578067.5
CDS CCA 72 bp CCGGAGGCACAGCCGGCGAGAGACGGCCACTCGCTTTaGAGCGGCGGCGAGGCCGGCGCCTTCCCGGGCACC +
Preference number: 6 (lower is better)
Translates to: PEAQPARDGHSL*SGGEAGAFPGT
Trigger: GGTGCCCGGGAAGGCGCCGGCCTCGCCGCCGCTCCAAAGCGAGTGGCCGTCTCTCGCCGGCTGTGCCTCCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584645.1
CDS CCA 72 bp GCCGCGCCGTCTGCCCATCCCGACGGCGGCCCGGCGTaGGGAAGCAACGGTGGCAGGGACAGGATGGAAGGG +
Preference number: 6 (lower is better)
Translates to: AAPSAHPDGGPA*GSNGGRDRMEG
Trigger: CCCTTCCATCCTGTCCCTGCCACCGTTGCTTCCCCACGCCGGGCCGCCGTCGGGATGGGCAGACGGCGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS GCA 72 bp CCCAGGCCCCTACCTTGGAGCGCTGCACCGTGCTGCTaGCGCCGCCTTTGGCGTCCTGAGGGAGAGGGGCGG +
Preference number: 6 (lower is better)
Translates to: PRPLPWSAAPCC*RRLWRPEGEGR
Trigger: CCGCCCCTCTCCCTCAGGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCAAGGTAGGGGCCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578297.1
CDS GCA 72 bp GGCCCCAGGCCCCTACCTTGGAGCGCTGCACCGTGCTaGTGCCGCCGCCTTTGGCGTCCTGAGGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GPRPLPWSAAPC*CRRLWRPEGEG
Trigger: CCCCTCTCCCTCAGGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCAAGGTAGGGGCCTGGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578297.1
CDS GCA 72 bp CCCGGCCCCAGGCCCCTACCTTGGAGCGCTGCACCGTaGTGCTGCCGCCGCCTTTGGCGTCCTGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: PGPRPLPWSAAP*CCRRLWRPEGE
Trigger: CTCTCCCTCAGGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCAAGGTAGGGGCCTGGGGCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578297.1
CDS GCA 72 bp TCCTACTGGGAGGGGACGAGTTCAGGCTGCGGCGGCTaGGGTCGCGGGACACTGGGCGCTCCCGGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SYWEGTSSGCGG*GRGTLGAPGLA
Trigger: AGCCAGGCCGGGAGCGCCCAGTGTCCCGCGACCGCAGCCGCCGCAGCCTGAACTCGTCCCCTCCCAGTAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS GCA 72 bp CCCGGCCCCAGGCCCCTACCTTGGAGCGCTGCACCGTaGTGCTGCCGCCGCCTTTGGCGTCATGAGAGGGGG +
Preference number: 6 (lower is better)
Translates to: PGPRPLPWSAAP*CCRRLWRHERG
Trigger: CCCCCTCTCATGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCAAGGTAGGGGCCTGGGGCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578067.5
ENST00000579329.1
ENST00000579814.1
CDS CCA 72 bp CCATCCCGACGGCGGCCCGGCGTGGGGAAGCAACGGTaGCAGGGACAGGATGGAAGGGCCGCGCTCCGCATC +
Preference number: 6 (lower is better)
Translates to: PSRRRPGVGKQR*QGQDGRAALRI
Trigger: GATGCGGAGCGCGGCCCTTCCATCCTGTCCCTGCCACCGTTGCTTCCCCACGCCGGGCCGCCGTCGGGATGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS CCA 72 bp GGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCGCTaGGTTCTGGCCCCGCGAGGACCGGACCCCAGACCC +
Preference number: 6 (lower is better)
Translates to: GGGSLGWRSGTR*VLAPRGPDPRP
Trigger: GGGTCTGGGGTCCGGTCCTCGCGGGGCCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578061.5
CDS GCA 72 bp GAAGCCTCGGGTGGAGAAGCGGCACCCGCTGGGTTCTaGAAGGGGAAGTCAGTCGGGAGGGCCCCGCCAGCC +
Preference number: 6 (lower is better)
Translates to: EASGGEAAPAGF*KGKSVGRAPPA
Trigger: GGCTGGCGGGGCCCTCCCGACTGACTTCCCCTTGCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578067.5
ENST00000578402.5
ENST00000580222.5
CDS GCA 72 bp CCCAGGCCCCTACCTTGGAGCGCTGCACCGTGCTGCTaGCGCCGCCTTTGGCGTCATGAGAGGGGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: PRPLPWSAAPCC*RRLWRHERGWP
Trigger: AGGCCACCCCCTCTCATGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCAAGGTAGGGGCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578067.5
ENST00000579329.1
ENST00000579814.1
CDS CCA 72 bp TCGGCCACCAGCCGCTCCATGGGGTACACGGTCTTCTaGCAGGCGGCGCAGGTCTCCTTCACCTGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: SATSRSMGYTVF*QAAQVSFTWAR
Trigger: GCGGGCCCAGGTGAAGGAGACCTGCGCCGCCTGCCAGAAGACCGTGTACCCCATGGAGCGGCTGGTGGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000582055.1
ENST00000583211.5
ENST00000584645.1
CDS CAA 90 bp AGAGGGGGTGGCCTGGGCGGCTCCTGCAGCCTGGAACATGGCTCGTaGGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCGCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: RGGGLGGSCSLEHGS*EVEASGGEAAPAGF
Trigger: GAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCACCCCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000583211.5
ENST00000584645.1
CDS CCA 72 bp GCCTGGGCGGCTCCTGCAGCCTGGAACATGGCTCGTTaGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCG +
Preference number: 6 (lower is better)
Translates to: AWAAPAAWNMAR*RWKPRVEKRHP
Trigger: CGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000583211.5
ENST00000584645.1
CDS CCA 72 bp AGGGACAGGATGGAAGGGCCGCGCTCCGCATCCTACTaGGAGGGGACGAGTTCAGGCTGCGGCGGCTGCGGT +
Preference number: 6 (lower is better)
Translates to: RDRMEGPRSASY*EGTSSGCGGCG
Trigger: ACCGCAGCCGCCGCAGCCTGAACTCGTCCCCTCCCAGTAGGATGCGGAGCGCGGCCCTTCCATCCTGTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578402.5
CDS CCA 72 bp GGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCCGCTaGGTTCTGCAAGGGGAAGTCAGTCGGGAGGGCCCC +
Preference number: 6 (lower is better)
Translates to: GGGSLGWRSGTR*VLQGEVSREGP
Trigger: GGGGCCCTCCCGACTGACTTCCCCTTGCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578067.5
ENST00000578402.5
ENST00000580222.5
CDS CAA 72 bp GGCCTGGGCGGCTCCTGCAGCCTGGAACATGGCTCGTaGGAGGTGGAAGCCTCGGGTGGAGAAGCGGCACCC +
Preference number: 6 (lower is better)
Translates to: GLGGSCSLEHGS*EVEASGGEAAP
Trigger: GGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000583211.5
ENST00000584645.1
CDS CCA 72 bp CCTGGAACATGGCTCGTTGGAGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGGGTTCAGGCCCGGCCT +
Preference number: 6 (lower is better)
Translates to: PGTWLVGGGSLG*RSGTRWVQARP
Trigger: AGGCCGGGCCTGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259006.8
ENST00000578993.5
ENST00000579814.1
ENST00000583211.5
CDS CCA 72 bp GCGGCTCCTGCAGCCTGGAACATGGCTCGTTGGAGGTaGAAGCCTCGGGTGGAGAAGCGGCACCCGCTGGGT +
Preference number: 6 (lower is better)
Translates to: AAPAAWNMARWR*KPRVEKRHPLG
Trigger: ACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000583211.5
ENST00000584645.1
CDS CCA 72 bp AGGGGGTGGCCTGGGCGGCTCCTGCAGCCTGGAACATaGCTCGTTGGAGGTGGAAGCCTCGGGTGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: RGWPGRLLQPGT*LVGGGSLGWRS
Trigger: GCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGGCTGCAGGAGCCGCCCAGGCCACCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000583211.5
ENST00000584645.1
CDS CCA 72 bp CCTGGAACATGGCTCGTTGGAGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGGGTTCTGGCCCCGCGA +
Preference number: 6 (lower is better)
Translates to: PGTWLVGGGSLG*RSGTRWVLAPR
Trigger: TCGCGGGGCCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578061.5
CDS CAA 90 bp GCCTTCCGCAGAGGGGGTGGAAGGTTACAGAGGCCTCAGGCCGTCTaGGTGCCGGGGTCCACCTCCTTGTGGGCCCAGAGCTCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: AFRRGGGRLQRPQAV*VPGSTSLWAQSSLC
Trigger: GCACAAGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCTCTGTAACCTTCCACCCCCTCTGCGGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000582055.1
ENST00000583211.5
CDS TCA 72 bp AGAACTCCCCGTGCAGCGCGGCGTAGCTGCCCAGGCTaGGCTTGGTGTGACAGTGCTTGGAGCGCTGCACCG +
Preference number: 6 (lower is better)
Translates to: RTPRAARRSCPG*AWCDSAWSAAP
Trigger: CGGTGCAGCGCTCCAAGCACTGTCACACCAAGCTCAGCCTGGGCAGCTACGCCGCGCTGCACGGGGAGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578993.5
CDS GCA 72 bp GGGGTGGAAGGTTACAGAGGCCTCAGGCCGTCTTGGTaGCGGGGTCCACCTCCTTGTGGGCCCAGAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GVEGYRGLRPSW*RGPPPCGPRAP
Trigger: AGGAGCTCTGGGCCCACAAGGAGGTGGACCCCGGCACCAAGACGGCCTGAGGCCTCTGTAACCTTCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000582055.1
ENST00000583211.5
CDS GCA 72 bp TGGTGTGACAGTGCTTGGAGCGCTGCACCGTGCTGCTaGCGCCGCCTTTGGCGTCATGAGAGGGGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: WCDSAWSAAPCC*RRLWRHERGWP
Trigger: AGGCCACCCCCTCTCATGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCAAGCACTGTCACACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578993.5
CDS GCA 72 bp GCTTGGTGTGACAGTGCTTGGAGCGCTGCACCGTGCTaGTGCCGCCGCCTTTGGCGTCATGAGAGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: AWCDSAWSAAPC*CRRLWRHERGW
Trigger: CCACCCCCTCTCATGACGCCAAAGGCGGCGGCAGCAGCACGGTGCAGCGCTCCAAGCACTGTCACACCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578993.5
CDS GCA 72 bp AGAACTCCCCGTGCAGCGCGGCGTAGCTGCCCAGGCTaGAGAAGCCAAACAACGGCGTCAGGTCAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: RTPRAARRSCPG*RSQTTASGQVR
Trigger: CCTGACCTGACCTGACGCCGTTGTTTGGCTTCTGCAGCCTGGGCAGCTACGCCGCGCTGCACGGGGAGTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579329.1
CDS CCA 72 bp CCTGGAACATGGCTCGTTGGAGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGGGTTCTGCAAGGGGAA +
Preference number: 6 (lower is better)
Translates to: PGTWLVGGGSLG*RSGTRWVLQGE
Trigger: TTCCCCTTGCAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578067.5
ENST00000578402.5
ENST00000579329.1
ENST00000580222.5
CDS GCA 72 bp GTTTGCAGTAGAACTCCCCGTGCAGCGCGGCGTAGCTaGCCAGGCTGCAGAAGCCAAACAACGGCGTCAGGT +
Preference number: 6 (lower is better)
Translates to: VCSRTPRAARRS*PGCRSQTTASG
Trigger: ACCTGACGCCGTTGTTTGGCTTCTGCAGCCTGGGCAGCTACGCCGCGCTGCACGGGGAGTTCTACTGCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579329.1
CDS GCA 72 bp CCACCTCCTTGTGGGCCCAGAGCTCCTTGTGCTGCTTaGGGCCAAACCCCTCGTCGTAGTTGCCTTTGCTCT +
Preference number: 6 (lower is better)
Translates to: PPPCGPRAPCAA*GQTPRRSCLCS
Trigger: AGAGCAAAGGCAACTACGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGCCCACAAGGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000259006.8
ENST00000578061.5
ENST00000578067.5
ENST00000578297.1
ENST00000578402.5
ENST00000578993.5
ENST00000579329.1
ENST00000579814.1
ENST00000580222.5
ENST00000582055.1
ENST00000583211.5
CDS CCA 72 bp CCTGGAACATGGCTCGTTGGAGGTGGAAGCCTCGGGTaGAGAAGCGGCACCCGCTGGGTTCTCATTTCTCAC +
Preference number: 6 (lower is better)
Translates to: PGTWLVGGGSLG*RSGTRWVLISH
Trigger: GTGAGAAATGAGAACCCAGCGGGTGCCGCTTCTCCACCCGAGGCTTCCACCTCCAACGAGCCATGTTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584645.1
CDS CAA 72 bp CGGTTGGGACTTTCCCTAAGTCATTTCCTGTTGCTCTaGGTCTTGCCACTTCCGCCCCTCACCCACCTCCCC +
Preference number: 6 (lower is better)
Translates to: RLGLSLSHFLLL*VLPLPPLTHLP
Trigger: GGGGAGGTGGGTGAGGGGCGGAAGTGGCAAGACCAAGAGCAACAGGAAATGACTTAGGGAAAGTCCCAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578067.5
CDS CAA 72 bp GGATTGCGGTTGGGACTTTCCCTAAGTCATTTCCTGTaGCTCTTGGTCTTGCCACTTCCGCCCCTCACCCAC +
Preference number: 6 (lower is better)
Translates to: GLRLGLSLSHFL*LLVLPLPPLTH
Trigger: GTGGGTGAGGGGCGGAAGTGGCAAGACCAAGAGCAACAGGAAATGACTTAGGGAAAGTCCCAACCGCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578067.5