Pregenerated sensors for LIM2 (Homo sapiens)
Ensembl gene IDs: ENSG00000105370Ensembl transcript IDs: ENST00000221973.7, ENST00000596399.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTACTTTAACTTCCAGATaGAGTTGGGGGACACATTTG | + |
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Preference number: 2 (lower is better) Translates to: NLPGRRGLESSQLPPMGPTLTSR*SWGTHL Trigger: CAAATGTGTCCCCCAACTTCATCTGGAAGTTAAAGT...AGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTATTACTTTAACTTCCAGATaGAGTTGGGGGACACATTTG | + |
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Preference number: 2 (lower is better) Translates to: LPGRRGLESSQLPPMGPITLTSR*SWGTHL Trigger: CAAATGTGTCCCCCAACTTCATCTGGAAGTTAAAGT...AATAGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | CTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTATTCCCCGAGGTCCGCCCTaGTCTTTCCCCAGGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LPGRRGLESSQLPPMGPIPRGPP*SFPRRG Trigger: GCCGCGCCTGGGGAAAGAGCAGGGCGGACCTCGGGG...AATAGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS-3UTR GCA 90 bp | CTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTATTCCCGAGCCCTCCTTCTaGCACGGCCCCTCTGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPGRRGLESSQLPPMGPIPEPSF*HGPSVQ Trigger: CTGCACAGAGGGGCCGTGGCAGAAGGAGGGCTCGGG...AATAGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596399.2 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTATTTACCGCCACAGGCCCTaGTGGGCGAAGGACCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LPGRRGLESSQLPPMGPIYRHRP*WAKDPD Trigger: GTCAGGGTCCTTCGCCCACCAGGGCCTGTGGCGGTA...AATAGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR TCA 90 bp | CTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTATTGTGGGCGAAGGACCCTaGCAGCCGGTACTGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: LPGRRGLESSQLPPMGPIVGEGP*QPVLHP Trigger: TGGATGCAGTACCGGCTGTCAGGGTCCTTCGCCCAC...AATAGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR TCA 90 bp | AACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTAGGCAGACGGGGACTTaGGTCTTCTCAGCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NLPGRRGLESSQLPPMGPRQTGT*VFSAPS Trigger: GGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCT...AGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR TCA 90 bp | AACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTCTGTACATGGTGATCTaGGTGGCAGAGCCTGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NLPGRRGLESSQLPPMGPLYMVI*VAEPAR Trigger: TCGGGCAGGCTCTGCCACTCAGATCACCATGTACAG...AGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | AACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTGCAGGTAGCACTTGTTaGCCAGGCAGTACCGCCACA | + |
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Preference number: 4 (lower is better) Translates to: NLPGRRGLESSQLPPMGPAGSTC*PGSTAT Trigger: TGTGGCGGTACTGCCTGGGCAACAAGTGCTACCTGC...AGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CCA 90 bp | AACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTAGTGGTCTGTTGCCATaGCCACCACCAGGAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: NLPGRRGLESSQLPPMGPSGLLP*PPPGGW Trigger: CCATCCTCCTGGTGGTGGCCATGGCAACAGACCACT...AGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CCA 90 bp | AACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTCGGTACTGCATCCAGTaGTCTGTTGCCATGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLPGRRGLESSQLPPMGPRYCIQ*SVAMAT Trigger: GGTGGCCATGGCAACAGACCACTGGATGCAGTACCG...AGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | CTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTATTCATCCAGTGGTCTGTTaGCATGGCCACCACCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRRGLESSQLPPMGPIHPVVC*HGHHQE Trigger: CTCCTGGTGGTGGCCATGGCAACAGACCACTGGATG...AATAGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTATTGTTGGGGGACACATTTaGGCTCAGCGGGGTGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: LPGRRGLESSQLPPMGPIVGGHI*AQRGVD Trigger: GTCTACACCCCGCTGAGCCCAAATGTGTCCCCCAAC...AATAGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTGAGTGGCAGAGCCTaGCCGAGCCCTCCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SIFLTTCQADGDLSLLSSLSGRA*PSPPSA Trigger: GGCAGAAGGAGGGCTCGGGCAGGCTCTGCCACTCAG...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCTGAGTGGCAGAGCCTaGCCGAGCCCTCCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VHFSNNLPGRRGLESSQLLSGRA*PSPPSA Trigger: GGCAGAAGGAGGGCTCGGGCAGGCTCTGCCACTCAG...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTATTGCAGAGTTCTCCATCTaGAATACAGGTGTCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LPGRRGLESSQLPPMGPIAEFSI*NTGVLG Trigger: CCCAAGGACACCTGTATTCCAGATGGAGAACTCTGC...AATAGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS-3UTR TCA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCTGCGAAGAACGTCATaGGCACTGCCACCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHFSNNLPGRRGLESSQLLRRTS*ALPPSP Trigger: TGGGCTGGGTGGCAGTGCTCATGACGTTCTTCGCAG...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTGCGAAGAACGTCATaGGCACTGCCACCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SIFLTTCQADGDLSLLSSLRRTS*ALPPSP Trigger: TGGGCTGGGTGGCAGTGCTCATGACGTTCTTCGCAG...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR TCA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCAGGCAGACGGGGACTTaGGTCTTCTCAGCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VHFSNNLPGRRGLESSQLRQTGT*VFSAPS Trigger: GGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCT...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCATCCAGTGGTCTGTTaGCATGGCCACCACCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SIFLTTCQADGDLSLLSSHPVVC*HGHHQE Trigger: CTCCTGGTGGTGGCCATGGCAACAGACCACTGGATG...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTGACAGCCGGTACTaGATCCAGTGGTCTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VHFSNNLPGRRGLESSQLPDSRY*IQWSVA Trigger: GGCAACAGACCACTGGATGCAGTACCGGCTGTCAGG...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCGCAGGTAGCACTTGTTaGCCAGGCAGTACCGCCACA | + |
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Preference number: 4 (lower is better) Translates to: SIFLTTCQADGDLSLLSSAGSTC*PGSTAT Trigger: TGTGGCGGTACTGCCTGGGCAACAAGTGCTACCTGC...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CCA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCGTTGGGGGACACATTTaGGCTCAGCGGGGTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIFLTTCQADGDLSLLSSVGGHI*AQRGVD Trigger: GTCTACACCCCGCTGAGCCCAAATGTGTCCCCCAAC...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCGGTGGCATTCCAGTATaGGATGCTGTCTGTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VHFSNNLPGRRGLESSQLGGIPV*DAVCLQ Trigger: CTGCAGACAGACAGCATCGCATACTGGAATGCCACC...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCATTCCAGTATGCGATaGTGTCTGTCTGCAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VHFSNNLPGRRGLESSQLHSSMR*CLSAGS Trigger: GCTACCTGCAGACAGACAGCATCGCATACTGGAATG...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596399.2 |
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| CDS-3UTR CCA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCGCATTCCAGTATGCTTaGGTTGCTCCCTTTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SIFLTTCQADGDLSLLSSAFQYA*VAPFPS Trigger: AGAGGGAAAGGGAGCAACCCAAGCATACTGGAATGC...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS-3UTR GCA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCATTTTTCTAACAACCTaGCAGGCAGACGGGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: VHFSNNLPGRRGLESSQLIFLTT*QADGDL Trigger: CAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAAT...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR GCA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCATTTTTCTAACAACCTaGCAGGCAGACGGGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: SIFLTTCQADGDLSLLSSIFLTT*QADGDL Trigger: CAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAAT...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCACTTTAACTTCCAGATaGAGTTGGGGGACACATTTG | + |
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Preference number: 4 (lower is better) Translates to: SIFLTTCQADGDLSLLSSTLTSR*SWGTHL Trigger: CAAATGTGTCCCCCAACTTCATCTGGAAGTTAAAGT...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR TCA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCACTTTAACTTCCAGATaGAGTTGGGGGACACATTTG | + |
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Preference number: 4 (lower is better) Translates to: VHFSNNLPGRRGLESSQLTLTSR*SWGTHL Trigger: CAAATGTGTCCCCCAACTTCATCTGGAAGTTAAAGT...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CCA 90 bp | TTTCACATCAGTTTTATTAGGCCCCAGAAAGTTGCTCTAATGGATAGTCCATTTGAATACAGGTGTCCTTaGGCCCCGAGGTCCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: FHISFIRPQKVALMDSPFEYRCP*APRSAL Trigger: CAGGGCGGACCTCGGGGCCCAAGGACACCTGTATTC...AAATGGACTATCCATTAGAGCAACTTTCTGGGGCCTAATAAAACTGATGTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS-3UTR CCA 90 bp | TTTCACATCAGTTTTATTAGGCCCCAGAAAGTTGCTCTAATGGATAGTCCATTTCGGTACTGCATCCAGTaGTCTGTTGCCATGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: FHISFIRPQKVALMDSPFRYCIQ*SVAMAT Trigger: GGTGGCCATGGCAACAGACCACTGGATGCAGTACCG...AAATGGACTATCCATTAGAGCAACTTTCTGGGGCCTAATAAAACTGATGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR TCA 90 bp | TTTCACATCAGTTTTATTAGGCCCCAGAAAGTTGCTCTAATGGATAGTCCATTTCTCCCTTTCCCTCTTTaGGCCGCAGAGTTCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: FHISFIRPQKVALMDSPFLPFPL*AAEFSI Trigger: GATGGAGAACTCTGCGGCTCAAAGAGGGAAAGGGAG...AAATGGACTATCCATTAGAGCAACTTTCTGGGGCCTAATAAAACTGATGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS-3UTR GCA 90 bp | TTTCACATCAGTTTTATTAGGCCCCAGAAAGTTGCTCTAATGGATAGTCCATTTGAACGTCATGAGCACTaGCACCCAGCCCAGGATGTA | + |
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Preference number: 4 (lower is better) Translates to: FHISFIRPQKVALMDSPFERHEH*HPAQDV Trigger: TACATCCTGGGCTGGGTGGCAGTGCTCATGACGTTC...AAATGGACTATCCATTAGAGCAACTTTCTGGGGCCTAATAAAACTGATGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS TCA 90 bp | GTTGCCCAGGCAGTACCGCCACAGGCCCTGGTGGGCGAAGGACCCTaGCAGCCGGTACTGCATCCAGTGGTCTGTTGCCATGGCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: VAQAVPPQALVGEGP*QPVLHPVVCCHGHH Trigger: GTGGTGGCCATGGCAACAGACCACTGGATGCAGTACCGGCTGTCAGGGTCCTTCGCCCACCAGGGCCTGTGGCGGTACTGCCTGGGCAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS CCA 90 bp | AGGCCCTGGTGGGCGAAGGACCCTGACAGCCGGTACTGCATCCAGTaGTCTGTTGCCATGGCCACCACCAGGAGGATGGTCCCCACCCAG | + |
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Preference number: 5 (lower is better) Translates to: RPWWAKDPDSRYCIQ*SVAMATTRRMVPTQ Trigger: CTGGGTGGGGACCATCCTCCTGGTGGTGGCCATGGCAACAGACCACTGGATGCAGTACCGGCTGTCAGGGTCCTTCGCCCACCAGGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS GCA 90 bp | TACCGCCACAGGCCCTGGTGGGCGAAGGACCCTGACAGCCGGTACTaGATCCAGTGGTCTGTTGCCATGGCCACCACCAGGAGGATGGTC | + |
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Preference number: 5 (lower is better) Translates to: YRHRPWWAKDPDSRY*IQWSVAMATTRRMV Trigger: GACCATCCTCCTGGTGGTGGCCATGGCAACAGACCACTGGATGCAGTACCGGCTGTCAGGGTCCTTCGCCCACCAGGGCCTGTGGCGGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS CCA 90 bp | CCCTCTTTGAGCCGCAGAGTTCTCCATCTGGAATACAGGTGTCCTTaGGCCCCGAGGTCCGCCCTGCTCTTTCCCCAGGCGCGGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PSLSRRVLHLEYRCP*APRSALLFPQARPG Trigger: TCCAGGCCGCGCCTGGGGAAAGAGCAGGGCGGACCTCGGGGCCCAAGGACACCTGTATTCCAGATGGAGAACTCTGCGGCTCAAAGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS CCA 90 bp | CGAAGGACCCTGACAGCCGGTACTGCATCCAGTGGTCTGTTGCCATaGCCACCACCAGGAGGATGGTCCCCACCCAGGCACAGAACAGGC | + |
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Preference number: 5 (lower is better) Translates to: RRTLTAGTASSGLLP*PPPGGWSPPRHRTG Trigger: GCCTGTTCTGTGCCTGGGTGGGGACCATCCTCCTGGTGGTGGCCATGGCAACAGACCACTGGATGCAGTACCGGCTGTCAGGGTCCTTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CAA 90 bp | CTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTATTGGAATACAGGTGTCCTaGGGCCCCGAGGTCCGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LPGRRGLESSQLPPMGPIGIQVS*GPEVRP Trigger: AGGGCGGACCTCGGGGCCCAAGGACACCTGTATTCC...AATAGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS GCA 90 bp | TGGCATTCCAGTATGCGATGCTGTCTGTCTGCAGGTAGCACTTGTTaGCCAGGCAGTACCGCCACAGGCCCTGGTGGGCGAAGGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: WHSSMRCCLSAGSTC*PGSTATGPGGRRTL Trigger: CAGGGTCCTTCGCCCACCAGGGCCTGTGGCGGTACTGCCTGGGCAACAAGTGCTACCTGCAGACAGACAGCATCGCATACTGGAATGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596399.2 |
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| CDS-3UTR CAA 90 bp | AACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCCTCCCATGGGCCCTAGTTGGGGGACACATTaGGGCTCAGCGGGGTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: NLPGRRGLESSQLPPMGPSWGTH*GSAGCR Trigger: TCTACACCCCGCTGAGCCCAAATGTGTCCCCCAACT...AGGGCCCATGGGAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CAA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCGCATCCAGTGGTCTGTaGCCATGGCCACCACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SIFLTTCQADGDLSLLSSASSGL*PWPPPG Trigger: TCCTGGTGGTGGCCATGGCAACAGACCACTGGATGC...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CAA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCAGGCAGACGGGGACTaGAGTCTTCTCAGCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: VHFSNNLPGRRGLESSQLQADGD*SLLSSL Trigger: GAGGGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTG...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS GCA 90 bp | AGACAGGATCATGAAGGCCCGGGTGGCATTCCAGTATGCTTGGGTTaGTCCCTTTCCCTCTTTGAGCCGCAGAGTTCTCCATCTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: RQDHEGPGGIPVCLG*SLSLFEPQSSPSGI Trigger: TATTCCAGATGGAGAACTCTGCGGCTCAAAGAGGGAAAGGGAGCAACCCAAGCATACTGGAATGCCACCCGGGCCTTCATGATCCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS-3UTR CAA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCGCTCCCTTTCCCTCTTaGAGCCGCAGAGTTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SIFLTTCQADGDLSLLSSAPFPS*SRRVLH Trigger: ATGGAGAACTCTGCGGCTCAAAGAGGGAAAGGGAGC...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS-3UTR CAA 90 bp | GTCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCGGCATTCCAGTATGCTaGGGTTGCTCCCTTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: VHFSNNLPGRRGLESSQLGIPVC*GCSLSL Trigger: GAGGGAAAGGGAGCAACCCAAGCATACTGGAATGCC...GAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS-3UTR CAA 90 bp | TCCATTTTTCTAACAACCTGCCAGGCAGACGGGGACTTGAGTCTTCTCAGCTCCAACTTCCAGATGAAGTaGGGGGACACATTTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SIFLTTCQADGDLSLLSSNFQMK*GDTFGL Trigger: GAGCCCAAATGTGTCCCCCAACTTCATCTGGAAGTT...GGAGCTGAGAAGACTCAAGTCCCCGTCTGCCTGGCAGGTTGTTAGAAAAATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS-3UTR CAA 90 bp | TTTCACATCAGTTTTATTAGGCCCCAGAAAGTTGCTCTAATGGATAGTCCATTTAACTTCCAGATGAAGTaGGGGGACACATTTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: FHISFIRPQKVALMDSPFNFQMK*GDTFGL Trigger: GAGCCCAAATGTGTCCCCCAACTTCATCTGGAAGTT...AAATGGACTATCCATTAGAGCAACTTTCTGGGGCCTAATAAAACTGATGTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS GCA 72 bp | TGGAATACAGGTGTCCTTGGGCCCCGAGGTCCGCCCTaGTCTTTCCCCAGGCGCGGCCTGGACCCTGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: WNTGVLGPRGPP*SFPRRGLDPGR Trigger: CCGGCCAGGGTCCAGGCCGCGCCTGGGGAAAGAGCAGGGCGGACCTCGGGGCCCAAGGACACCTGTATTCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS GCA 72 bp | AGGCCCTGGTGGGCGAAGGACCCTGACAGCCGGTACTaGATCCAGTGGTCTGTTGCCATGGCCACCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: RPWWAKDPDSRY*IQWSVAMATTR Trigger: CCTGGTGGTGGCCATGGCAACAGACCACTGGATGCAGTACCGGCTGTCAGGGTCCTTCGCCCACCAGGGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS CAA 90 bp | GGTGGGCGAAGGACCCTGACAGCCGGTACTGCATCCAGTGGTCTGTaGCCATGGCCACCACCAGGAGGATGGTCCCCACCCAGGCACAGA | + |
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Preference number: 6 (lower is better) Translates to: GGRRTLTAGTASSGL*PWPPPGGWSPPRHR Trigger: TCTGTGCCTGGGTGGGGACCATCCTCCTGGTGGTGGCCATGGCAACAGACCACTGGATGCAGTACCGGCTGTCAGGGTCCTTCGCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS TCA 72 bp | GCAGTACCGCCACAGGCCCTGGTGGGCGAAGGACCCTaGCAGCCGGTACTGCATCCAGTGGTCTGTTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: AVPPQALVGEGP*QPVLHPVVCCH Trigger: ATGGCAACAGACCACTGGATGCAGTACCGGCTGTCAGGGTCCTTCGCCCACCAGGGCCTGTGGCGGTACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS GCA 72 bp | GCTCACCGATGCTGTCTGTCTGCAGGTAGCACTTGTTaGCCAGGCAGTACCGCCACAGGCCCTGGTGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: AHRCCLSAGSTC*PGSTATGPGGR Trigger: TCGCCCACCAGGGCCTGTGGCGGTACTGCCTGGGCAACAAGTGCTACCTGCAGACAGACAGCATCGGTGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS CCA 72 bp | CTGACAGCCGGTACTGCATCCAGTGGTCTGTTGCCATaGCCACCACCAGGAGGATGGTCCCCACCCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LTAGTASSGLLP*PPPGGWSPPRH Trigger: GTGCCTGGGTGGGGACCATCCTCCTGGTGGTGGCCATGGCAACAGACCACTGGATGCAGTACCGGCTGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS CCA 72 bp | TGGGCGAAGGACCCTGACAGCCGGTACTGCATCCAGTaGTCTGTTGCCATGGCCACCACCAGGAGGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: WAKDPDSRYCIQ*SVAMATTRRMV Trigger: GACCATCCTCCTGGTGGTGGCCATGGCAACAGACCACTGGATGCAGTACCGGCTGTCAGGGTCCTTCGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221973.7 ENST00000596399.2 |
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| CDS GCA 72 bp | AGTATGCGATGCTGTCTGTCTGCAGGTAGCACTTGTTaGCCAGGCAGTACCGCCACAGGCCCTGGTGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: SMRCCLSAGSTC*PGSTATGPGGR Trigger: TCGCCCACCAGGGCCTGTGGCGGTACTGCCTGGGCAACAAGTGCTACCTGCAGACAGACAGCATCGCATACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596399.2 |
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| CDS CAA 90 bp | GCCCGGGTGGCATTCCAGTATGCTTGGGTTGCTCCCTTTCCCTCTTaGAGCCGCAGAGTTCTCCATCTGGAATACAGGTGTCCTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ARVAFQYAWVAPFPS*SRRVLHLEYRCPWA Trigger: GGCCCAAGGACACCTGTATTCCAGATGGAGAACTCTGCGGCTCAAAGAGGGAAAGGGAGCAACCCAAGCATACTGGAATGCCACCCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS TCA 72 bp | CATTCCAGTATGCTTGGGTTGCTCCCTTTCCCTCTTTaGGCCGCAGAGTTCTCCATCTGGAATACAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: HSSMLGLLPFPL*AAEFSIWNTGV Trigger: GACACCTGTATTCCAGATGGAGAACTCTGCGGCTCAAAGAGGGAAAGGGAGCAACCCAAGCATACTGGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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| CDS CAA 72 bp | GCATTCCAGTATGCTTGGGTTGCTCCCTTTCCCTCTTaGAGCCGCAGAGTTCTCCATCTGGAATACAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: AFQYAWVAPFPS*SRRVLHLEYRC Trigger: ACACCTGTATTCCAGATGGAGAACTCTGCGGCTCAAAGAGGGAAAGGGAGCAACCCAAGCATACTGGAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221973.7 |
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