RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LILRA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000239998

Ensembl transcript IDs: ENST00000251376.7, ENST00000251377.7, ENST00000391738.8, ENST00000472992.1, ENST00000611940.4, ENST00000612001.4, ENST00000613573.4, ENST00000616629.1, ENST00000617156.1, ENST00000617409.4, ENST00000620279.4, ENST00000621721.4, ENST00000622640.3

Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTaGTCATTAGTGAAGACAGTTCTGTCCCTTGCTTCCCAACCCTGT +
Preference number: 1 (lower is better)
Translates to: RYMGELSVGCATGPW*SLVKTVLSLASQPC
Trigger: ACAGGGTTGGGAAGCAAGGGACAGAACTGTCTTCACTAATGAGCACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR CCA 90 bp TGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTaGTGCTCATTAGTGAAGACAGTTCTGTCCCTTGCTTCCCAACCC +
Preference number: 1 (lower is better)
Translates to: CRYMGELSVGCATGP*CSLVKTVLSLASQP
Trigger: GGGTTGGGAAGCAAGGGACAGAACTGTCTTCACTAATGAGCACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR GCA 90 bp TGCCACAGGTCCCTGGTGCTCATTAGTGAAGACAGTTCTGTCCCTTaGTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACCTTGAT +
Preference number: 1 (lower is better)
Translates to: CHRSLVLISEDSSVP*FPTLYSVRTHWHLD
Trigger: ATCAAGGTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTCTTCACTAATGAGCACCAGGGACCTGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR CCA 90 bp GTAGAAGTGATCATTGCCTCTGAAATAGAAAGGACTGTAGGTATATaGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTGCTCAT +
Preference number: 1 (lower is better)
Translates to: VEVIIASEIERTVGI*VSSQWDVPQVPGAH
Trigger: ATGAGCACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCTTTCTATTTCAGAGGCAATGATCACTTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR TCA 90 bp TTAGTGAAGACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTaGGAACCCATTGGCACCTTGATTTGGGCCATGAGAAAAATATTT +
Preference number: 1 (lower is better)
Translates to: LVKTVLSLASQPCIQ*EPIGTLIWAMRKIF
Trigger: AAATATTTTTCTCATGGCCCAAATCAAGGTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTCTTCACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR GCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTGCCACAGGTCCCTGGTaGTCATTAGTGAAGACAGTT +
Preference number: 2 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGATGPW*SLVKTV
Trigger: AACTGTCTTCACTAATGAGCACCAGGGACCTGTGGC...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTTGTGCCACAGGTCCCTaGTGCTCATTAGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGCATGP*CSLVKT
Trigger: TGTCTTCACTAATGAGCACCAGGGACCTGTGGCACA...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTTTTGGATCTCTGAACTaGAGAGACGGGGACTCAGTA +
Preference number: 2 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGFGSLN*RDGDSV
Trigger: TACTGAGTCCCCGTCTCTTCAGTTCAGAGATCCAAA...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR GCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTGACAGTTCTGTCCCTTaGTTCCCAACCCTGTATTCA +
Preference number: 2 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGDSSVP*FPTLYS
Trigger: TGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAGATGGAGGCAGAAACTaGTGGGATGCTGCCCCAAGC +
Preference number: 2 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVDGGRN*WDAAPS
Trigger: GCTTGGGGCAGCATCCCACCAGTTTCTGCCTCCATC...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAGGCAGGAGAATTGCTTaGACCTGGGAAGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVGRRIA*TWEVEV
Trigger: AACCTCCACTTCCCAGGTTCAAGCAATTCTCCTGCC...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAGCAACCTCTGTTTCCTaGGTTGACGCGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVATSVS*VDAILL
Trigger: CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGC...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTATCAGGTTTGGATCTCTaGACTGAAGAGACGGGGACT +
Preference number: 2 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVSGLDL*TEETGT
Trigger: AGTCCCCGTCTCTTCAGTTCAGAGATCCAAACCTGA...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGGGCAGGAGAATTGCTTaGACCTGGGAAGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: ARSQLTATSVSWVDAILLGRRIA*TWEVEV
Trigger: AACCTCCACTTCCCAGGTTCAAGCAATTCTCCTGCC...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTCTGATCTCCTGTCGTTaGTTTAGTTGGTGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGLISCR*FSWWFR
Trigger: CCTGAACCACCAACTAAATCAACGACAGGAGATCAG...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAGGTAGGTGTAAGCATTaGGAAGATGGAGGCAGAAAC +
Preference number: 2 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVGRCKH*EDGGRN
Trigger: GTTTCTGCCTCCATCTTCTCAATGCTTACACCTACC...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR GCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGGCCACAGGTCCCTGGTaGTCATTAGTGAAGACAGTT +
Preference number: 2 (lower is better)
Translates to: ARSQLTATSVSWVDAILLATGPW*SLVKTV
Trigger: AACTGTCTTCACTAATGAGCACCAGGGACCTGTGGC...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTATTGGCACCTTGATTTaGGCCATGAGAAAAATATTT +
Preference number: 2 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGIGTLI*AMRKIF
Trigger: AAATATTTTTCTCATGGCCCAAATCAAGGTGCCAAT...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAAGCTGTGGTGTCACTTaGAATGCCAGTGTGATGATT +
Preference number: 2 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVSCGVT*NASVMI
Trigger: AATCATCACACTGGCATTTCAAGTGACACCACAGCT...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGAGGACTGTAGGTATATaGGTGAGCTCTCAGTGGGAT +
Preference number: 2 (lower is better)
Translates to: ARSQLTATSVSWVDAILLRTVGI*VSSQWD
Trigger: ATCCCACTGAGAGCTCACCCATATACCTACAGTCCT...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACTTTGGATCTCTGAACTaGAGAGACGGGGACTCAGTA +
Preference number: 2 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHFGSLN*RDGDSV
Trigger: TACTGAGTCCCCGTCTCTTCAGTTCAGAGATCCAAA...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAAGTGATCATTGCCTCTaGAATAGAAAGGACTGTAGG +
Preference number: 2 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVSDHCL*NRKDCR
Trigger: CCTACAGTCCTTTCTATTTCAGAGGCAATGATCACT...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGTTCCTGGTTGGAATCTaGTCTCCTGTCGTTGATTTA +
Preference number: 2 (lower is better)
Translates to: ARSQLTATSVSWVDAILLFLVGI*SPVVDL
Trigger: TAAATCAACGACAGGAGATCAGATTCCAACCAGGAA...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACAGCTGTGGTGTCACTTaGAATGCCAGTGTGATGATT +
Preference number: 2 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHSCGVT*NASVMI
Trigger: AATCATCACACTGGCATTTCAAGTGACACCACAGCT...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGAGTGATCATTGCCTCTaGAATAGAAAGGACTGTAGG +
Preference number: 2 (lower is better)
Translates to: ARSQLTATSVSWVDAILLSDHCL*NRKDCR
Trigger: CCTACAGTCCTTTCTATTTCAGAGGCAATGATCACT...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGACTTTGATTTTTAGGTaGGCCGTGTTATCTCCCACA +
Preference number: 2 (lower is better)
Translates to: ARSQLTATSVSWVDAILLTLIFR*AVLSPT
Trigger: TGTGGGAGATAACACGGCTCACCTAAAAATCAAAGT...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTTTATGTTTTCCTGGTTaGAATCTGATCTCCTGTCGT +
Preference number: 2 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGLCFPG*NLISCR
Trigger: ACGACAGGAGATCAGATTCCAACCAGGAAAACATAA...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR GCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCGCTCTCAGTGGGATGTaGCACAGGTCCCTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIALSGM*HRSLVL
Trigger: GAGCACCAGGGACCTGTGGCACATCCCACTGAGAGC...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACTTATGTTTTCCTGGTTaGAATCTGATCTCCTGTCGT +
Preference number: 2 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHLCFPG*NLISCR
Trigger: ACGACAGGAGATCAGATTCCAACCAGGAAAACATAA...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCTGGGTGAGCTCTCAGTaGGATGTGCCACAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIWVSSQ*DVPQVP
Trigger: AGGGACCTGTGGCACATCCCACTGAGAGCTCACCCA...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR GCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCCCCCAAGCCAAGGAGTaGCTGGACCAGCAGAAAGTA +
Preference number: 2 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIPQAKE*LDQQKV
Trigger: TACTTTCTGCTGGTCCAGGCACTCCTTGGCTTGGGG...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCGCAACCTCTGTTTCCTaGGTTGACGCGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIATSVS*VDAILL
Trigger: CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGC...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCTGTGCCACAGGTCCCTaGTGCTCATTAGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWICATGP*CSLVKT
Trigger: TGTCTTCACTAATGAGCACCAGGGACCTGTGGCACA...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR CAA 90 bp TGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACCTTGATTaGGGCCATGAGAAAAATATTTATGTCACAGAAATTGGTAGATAC +
Preference number: 2 (lower is better)
Translates to: CFPTLYSVRTHWHLD*GHEKNIYVTEIGRY
Trigger: GTATCTACCAATTTCTGTGACATAAATATTTTTCTCATGGCCCAAATCAAGGTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR GCA 72 bp CCCAGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTaGAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: PRLEGSVAISAH*KLRLPGSRHSP
Trigger: AGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CAA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTACGCAATCTCGGCCCATaGCAAGCTCCGCCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVRNLGP*QAPPPR
Trigger: CCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCG...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR GCA 72 bp GGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTaGTCATTAGTGAAGACAGTTCTGTCCCTTGCTTCC +
Preference number: 3 (lower is better)
Translates to: GELSVGCATGPW*SLVKTVLSLAS
Trigger: GGAAGCAAGGGACAGAACTGTCTTCACTAATGAGCACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CAA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAAGGCAGGAGAATTGCTaGAACCTGGGAAGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVRQENC*NLGSGG
Trigger: ACCTCCACTTCCCAGGTTCAAGCAATTCTCCTGCCT...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR CCA 72 bp GGGGGCTCAGGTTCAGGTTGGATGAATGGAAACAGCTaGCATGTGCCTGTCTCGTTAAGAGGAGTCAAAATG +
Preference number: 3 (lower is better)
Translates to: GGSGSGWMNGNS*HVPVSLRGVKM
Trigger: CATTTTGACTCCTCTTAACGAGACAGGCACATGCCAGCTGTTTCCATTCATCCAACCTGAACCTGAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CAA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAGTGTCAGAATTTCATTaGACCTGTGCCATAACACTG +
Preference number: 3 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVVSEFH*TCAITL
Trigger: CAGTGTTATGGCACAGGTCAAATGAAATTCTGACAC...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR GCA 72 bp TCCCTGGTGCTCATTAGTGAAGACAGTTCTGTCCCTTaGTTCCCAACCCTGTATTCAGTGAGAACCCATTGG +
Preference number: 3 (lower is better)
Translates to: SLVLISEDSSVP*FPTLYSVRTHW
Trigger: CCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTCTTCACTAATGAGCACCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CAA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTCATTGGCACCTTGATTaGGGCCATGAGAAAAATATT +
Preference number: 3 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGHWHLD*GHEKNI
Trigger: AATATTTTTCTCATGGCCCAAATCAAGGTGCCAATG...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR-3UTR CAA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCCCTAGGGATGCTGACTaGTCCAGGGAGCAGGTGCAG +
Preference number: 3 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVPRDAD*SREQVQ
Trigger: CTGCACCTGCTCCCTGGACAAGTCAGCATCCCTAGG...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472992.1
ENST00000612001.4
ENST00000617156.1
3UTR TCA 72 bp AATACCGAAATTCTAAGTGGATCTTCTAGGACAGCATaGTGGGGCTCACCAGAGAACCACAGGGACATGGAA +
Preference number: 3 (lower is better)
Translates to: NTEILSGSSRTA*WGSPENHRDME
Trigger: TTCCATGTCCCTGTGGTTCTCTGGTGAGCCCCATCATGCTGTCCTAGAAGATCCACTTAGAATTTCGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR CCA 72 bp CCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTaGCACCTTGATTTGGGCCATGAGAAAAATATTTAT +
Preference number: 3 (lower is better)
Translates to: PCFPTLYSVRTH*HLDLGHEKNIY
Trigger: ATAAATATTTTTCTCATGGCCCAAATCAAGGTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
3UTR TCA 72 bp ATTGACTTGTTCCCCCTAATATACACGTTGAAATCCTaGGCCCCATTAGCTATAAATGTGAACATAGTTGGA +
Preference number: 3 (lower is better)
Translates to: IDLFPLIYTLKS*APLAINVNIVG
Trigger: TCCAACTATGTTCACATTTATAGCTAATGGGGCTCAGGATTTCAACGTGTATATTAGGGGGAACAAGTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTGGAGGCAGAAACTGGTaGGATGCTGCCCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGGGRNW*DAAPSQ
Trigger: TTGGCTTGGGGCAGCATCCCACCAGTTTCTGCCTCC...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTAATAGCCGGGAATGGTaGTGCACACCTGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGNSREW*CTPVVQ
Trigger: CTGGACTACAGGTGTGCACCACCATTCCCGGCTATT...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTTCAGGTTTGGATCTCTaGACTGAAGAGACGGGGACT +
Preference number: 4 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGSGLDL*TEETGT
Trigger: AGTCCCCGTCTCTTCAGTTCAGAGATCCAAACCTGA...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTACTGTGGGGACCGGCTaGACCGAGAGAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGTVGTG*TEREGL
Trigger: CAGACCCTCTCTCTCGGTGCAGCCGGTCCCCACAGT...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAACTGTGGGGACCGGCTaGACCGAGAGAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVTVGTG*TEREGL
Trigger: CAGACCCTCTCTCTCGGTGCAGCCGGTCCCCACAGT...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTCAGAGGCAGGAGAATTaGTTGAACCTGGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGQRQEN*LNLGSG
Trigger: TCCACTTCCCAGGTTCAAGCAATTCTCCTGCCTCTG...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTGCTCTCAGTGGGATGTaGCACAGGTCCCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGALSGM*HRSLVL
Trigger: GAGCACCAGGGACCTGTGGCACATCCCACTGAGAGC...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTATGGGTGAGCTCTCAGTaGGATGTGCCACAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVWVSSQ*DVPQVP
Trigger: AGGGACCTGTGGCACATCCCACTGAGAGCTCACCCA...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTACTTTGATTTTTAGGTaGGCCGTGTTATCTCCCACA +
Preference number: 4 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGTLIFR*AVLSPT
Trigger: TGTGGGAGATAACACGGCTCACCTAAAAATCAAAGT...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGGATGGAGGCAGAAACTaGTGGGATGCTGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: ARSQLTATSVSWVDAILLDGGRN*WDAAPS
Trigger: GCTTGGGGCAGCATCCCACCAGTTTCTGCCTCCATC...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTACATAGAACTGTCCTGTaGTCAGGATGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVHRTVL*SGCPGG
Trigger: ACCCCCTGGACATCCTGATCACAGGACAGTTCTATG...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGCCCCAAGCCAAGGAGTaGCTGGACCAGCAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: ARSQLTATSVSWVDAILLPQAKE*LDQQKV
Trigger: TACTTTCTGCTGGTCCAGGCACTCCTTGGCTTGGGG...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTTTGCCCAGGCTGGAGTaGAATGGCAAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGLPRLE*NGKISA
Trigger: AGCTGAGATCTTGCCATTGCACTCCAGCCTGGGCAA...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp AGGCTGGAGGGCAGTGTCGCAATCTCGGCCCATTGCAAGCTCCGCCTCCCAGGTTTATGTTTTCCTGGTTaGAATCTGATCTCCTGTCGT +
Preference number: 4 (lower is better)
Translates to: RLEGSVAISAHCKLRLPGLCFPG*NLISCR
Trigger: ACGACAGGAGATCAGATTCCAACCAGGAAAACATAA...ACCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCGACACTGCCCTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACTGGGTGAGCTCTCAGTaGGATGTGCCACAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHWVSSQ*DVPQVP
Trigger: AGGGACCTGTGGCACATCCCACTGAGAGCTCACCCA...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGAAGTGGAGGTTGCAGTaGGCCGAGATTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: ARSQLTATSVSWVDAILLKWRLQ*AEIAPL
Trigger: CAATGGTGCAATCTCGGCTCACTGCAACCTCCACTT...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAACAGAAGAATGGGTGTaGAGACAGAGGCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVTEEWV*RQRQPG
Trigger: ACCTGGTTGCCTCTGTCTTCACACCCATTCTTCTGT...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGTCTTCTAGGACAGCATaGTGGGGCTCACCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ARSQLTATSVSWVDAILLSSRTA*WGSPEN
Trigger: GTTCTCTGGTGAGCCCCATCATGCTGTCCTAGAAGA...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTGCCACAGGTCCCTGGTaGTCATTAGTGAAGACAGTT +
Preference number: 4 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGATGPW*SLVKTV
Trigger: AACTGTCTTCACTAATGAGCACCAGGGACCTGTGGC...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTTGTGCCACAGGTCCCTaGTGCTCATTAGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGCATGP*CSLVKT
Trigger: TGTCTTCACTAATGAGCACCAGGGACCTGTGGCACA...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACCATAGAACTGTCCTGTaGTCAGGATGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHHRTVL*SGCPGG
Trigger: ACCCCCTGGACATCCTGATCACAGGACAGTTCTATG...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGACAGAAGAATGGGTGTaGAGACAGAGGCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: ARSQLTATSVSWVDAILLTEEWV*RQRQPG
Trigger: ACCTGGTTGCCTCTGTCTTCACACCCATTCTTCTGT...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGCAGGTTCAGGTTGGATaGATGGAAACAGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: ARSQLTATSVSWVDAILLQVQVG*METAGM
Trigger: CATGCCAGCTGTTTCCATTCATCCAACCTGAACCTG...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAGACAGTTCTGTCCCTTaGTTCCCAACCCTGTATTCA +
Preference number: 4 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVDSSVP*FPTLYS
Trigger: TGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTGACAGTTCTGTCCCTTaGTTCCCAACCCTGTATTCA +
Preference number: 4 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGDSSVP*FPTLYS
Trigger: TGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTTTCAGGTTGGATGAATaGAAACAGCTGGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGFRLDE*KQLACA
Trigger: GGCACATGCCAGCTGTTTCCATTCATCCAACCTGAA...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTATTCAGGTTGGATGAATaGAAACAGCTGGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVFRLDE*KQLACA
Trigger: GGCACATGCCAGCTGTTTCCATTCATCCAACCTGAA...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGTTTGGATCTCTGAACTaGAGAGACGGGGACTCAGTA +
Preference number: 4 (lower is better)
Translates to: ARSQLTATSVSWVDAILLFGSLN*RDGDSV
Trigger: TACTGAGTCCCCGTCTCTTCAGTTCAGAGATCCAAA...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGCTGATCTCCTGTCGTTaGTTTAGTTGGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ARSQLTATSVSWVDAILLLISCR*FSWWFR
Trigger: CCTGAACCACCAACTAAATCAACGACAGGAGATCAG...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACGCCCGGCATGTACTTTaGTTTTTAGGTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHARHVL*FLGEPC
Trigger: ACACGGCTCACCTAAAAATCAAAGTACATGCCGGGC...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACCAGGTTCAGGTTGGATaGATGGAAACAGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHQVQVG*METAGM
Trigger: CATGCCAGCTGTTTCCATTCATCCAACCTGAACCTG...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTAAGAACCACAGGGACATaGAAAGCACAGAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVRTTGT*KAQRRK
Trigger: TTTTCTCCTCTGTGCTTTCCATGTCCCTGTGGTTCT...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACCTGATCTCCTGTCGTTaGTTTAGTTGGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHLISCR*FSWWFR
Trigger: CCTGAACCACCAACTAAATCAACGACAGGAGATCAG...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTAGTGATCATTGCCTCTaGAATAGAAAGGACTGTAGG +
Preference number: 4 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGSDHCL*NRKDCR
Trigger: CCTACAGTCCTTTCTATTTCAGAGGCAATGATCACT...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACGGTAGGTGTAAGCATTaGGAAGATGGAGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHGRCKH*EDGGRN
Trigger: GTTTCTGCCTCCATCTTCTCAATGCTTACACCTACC...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTACTGTGGGGACCGGCTaGACCGAGAGAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSTVGTG*TEREGL
Trigger: CAGACCCTCTCTCTCGGTGCAGCCGGTCCCCACAGT...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000251376.7
ENST00000251377.7
ENST00000391738.8
ENST00000611940.4
ENST00000612001.4
ENST00000613573.4
ENST00000616629.1
ENST00000617409.4
ENST00000620279.4
ENST00000621721.4
ENST00000622640.3
CDS-3UTR GCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTGGATGAGCCCTCAGTaGATGGCGGTCGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVWMSPQ*MAVVPP
Trigger: TGGAGGGACGACCGCCATGCACTGAGGGCTCATCCA...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251377.7
ENST00000611940.4
ENST00000612001.4
CDS-3UTR GCA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTTGGATGAGCCCTCAGTaGATGGCGGTCGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSWMSPQ*MAVVPP
Trigger: TGGAGGGACGACCGCCATGCACTGAGGGCTCATCCA...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251377.7
ENST00000611940.4
ENST00000612001.4
CDS-3UTR GCA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTGCTCTCAGTGGGATGTaGCACAGGTCCCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSALSGM*HRSLVL
Trigger: GAGCACCAGGGACCTGTGGCACATCCCACTGAGAGC...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACAGAACCACAGGGACATaGAAAGCACAGAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHRTTGT*KAQRRK
Trigger: TTTTCTCCTCTGTGCTTTCCATGTCCCTGTGGTTCT...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GACAGTTCTGTCCCTTGCTTCCCAACCCTGTATTCAGTGAGAACCCATTGGCACAGTGATCATTGCCTCTaGAATAGAAAGGACTGTAGG +
Preference number: 4 (lower is better)
Translates to: DSSVPCFPTLYSVRTHWHSDHCL*NRKDCR
Trigger: CCTACAGTCCTTTCTATTTCAGAGGCAATGATCACT...GTGCCAATGGGTTCTCACTGAATACAGGGTTGGGAAGCAAGGGACAGAACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp AGGACTGTAGGTATATGGGTGAGCTCTCAGTGGGATGTGCCACAGGTCCCTGGTGAGGAGTCAAAATGGTaGGTAAATACCGAAATTCTA +
Preference number: 4 (lower is better)
Translates to: RTVGIWVSSQWDVPQVPGEESKW*VNTEIL
Trigger: TAGAATTTCGGTATTTACTCACCATTTTGACTCCTC...ACCAGGGACCTGTGGCACATCCCACTGAGAGCTCACCCATATACCTACAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCGGAGGCAGAAACTGGTaGGATGCTGCCCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVGGRNW*DAAPSQ
Trigger: TTGGCTTGGGGCAGCATCCCACCAGTTTCTGCCTCC...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTCTCAGGAGGCTGAGGTaGGAGGAATACTTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSLRRLR*EEYFGL
Trigger: CAGGCCGAAGTATTCCTCCCACCTCAGCCTCCTGAG...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612001.4
CDS-3UTR TCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCGGCAGGTGGATAACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVGRWIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTTATCCACCTGCC...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCGGCTGCAGGGAGCTATaGTCACCCCTTAGCATTCCA +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVGCREL*SPLSIP
Trigger: TGGAATGCTAAGGGGTGATCATAGCTCCCTGCAGCC...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612001.4
CDS-3UTR GCA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTCCCCAAGCCAAGGAGTaGCTGGACCAGCAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSPQAKE*LDQQKV
Trigger: TACTTTCTGCTGGTCCAGGCACTCCTTGGCTTGGGG...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCGATGGAGGCAGAAACTaGTGGGATGCTGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIDGGRN*WDAAPS
Trigger: GCTTGGGGCAGCATCCCACCAGTTTCTGCCTCCATC...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCCAGGGTCTACCATGGTaGCTCATGCCTGGAATCCCA +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVQGLPW*LMPGIP
Trigger: TGGGATTCCAGGCATGAGCCACCATGGTAGACCCTG...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612001.4
CDS-3UTR TCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCCATAGAACTGTCCTGTaGTCAGGATGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVHRTVL*SGCPGG
Trigger: ACCCCCTGGACATCCTGATCACAGGACAGTTCTATG...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000251376.7
ENST00000251377.7
ENST00000391738.8
ENST00000611940.4
ENST00000612001.4
ENST00000613573.4
ENST00000616629.1
ENST00000617409.4
ENST00000620279.4
ENST00000621721.4
ENST00000622640.3
CDS-3UTR TCA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTCATAGAACTGTCCTGTaGTCAGGATGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSHRTVL*SGCPGG
Trigger: ACCCCCTGGACATCCTGATCACAGGACAGTTCTATG...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000251376.7
ENST00000251377.7
ENST00000391738.8
ENST00000611940.4
ENST00000612001.4
ENST00000613573.4
ENST00000616629.1
ENST00000617409.4
ENST00000620279.4
ENST00000621721.4
ENST00000622640.3
CDS-3UTR TCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCGGCAGGTGGATAACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIGRWIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTTATCCACCTGCC...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTTTGCCCAGGCTGGAGTaGAATGGCAAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSLPRLE*NGKISA
Trigger: AGCTGAGATCTTGCCATTGCACTCCAGCCTGGGCAA...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGATTGGCACCTTGATTTaGGCCATGAGAAAAATATTT +
Preference number: 4 (lower is better)
Translates to: ARSQLTATSVSWVDAILLIGTLI*AMRKIF
Trigger: AAATATTTTTCTCATGGCCCAAATCAAGGTGCCAAT...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTGCAACCTCTGTTTCCTaGGTTGACGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSATSVS*VDAILL
Trigger: CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGC...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCAGGTTTGGATCTCTaGACTGAAGAGACGGGGACT +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVSGLDL*TEETGT
Trigger: AGTCCCCGTCTCTTCAGTTCAGAGATCCAAACCTGA...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCGCCCGGCATGTACTTTaGTTTTTAGGTGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVARHVL*FLGEPC
Trigger: ACACGGCTCACCTAAAAATCAAAGTACATGCCGGGC...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCGGCAGGAGAATTGCTTaGACCTGGGAAGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIGRRIA*TWEVEV
Trigger: AACCTCCACTTCCCAGGTTCAAGCAATTCTCCTGCC...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCTCTTCTAGGACAGCATaGTGGGGCTCACCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWISSRTA*WGSPEN
Trigger: GTTCTCTGGTGAGCCCCATCATGCTGTCCTAGAAGA...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR GCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCCAGAGGCAGGAGAATTaGTTGAACCTGGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVQRQEN*LNLGSG
Trigger: TCCACTTCCCAGGTTCAAGCAATTCTCCTGCCTCTG...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCAGGACTGTAGGTATATaGGTGAGCTCTCAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVRTVGI*VSSQWD
Trigger: ATCCCACTGAGAGCTCACCCATATACCTACAGTCCT...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTTTCCTGGTTGGAATCTaGTCTCCTGTCGTTGATTTA +
Preference number: 4 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSFLVGI*SPVVDL
Trigger: TAAATCAACGACAGGAGATCAGATTCCAACCAGGAA...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR TCA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCGAGGAGTCAAAATGGTaGGTAAATACCGAAATTCTA +
Preference number: 4 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVEESKW*VNTEIL
Trigger: TAGAATTTCGGTATTTACTCACCATTTTGACTCCTC...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CCA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCTTATGTTTTCCTGGTTaGAATCTGATCTCCTGTCGT +
Preference number: 4 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWILCFPG*NLISCR
Trigger: ACGACAGGAGATCAGATTCCAACCAGGAAAACATAA...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CAA 90 bp GCAAGATCTCAGCTCACTGCAACCTCTGTTTCCTGGGTTGACGCGATTCTCCTGCGCAATCTCGGCCCATaGCAAGCTCCGCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ARSQLTATSVSWVDAILLRNLGP*QAPPPR
Trigger: CCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCG...CAGGAGAATCGCGTCAACCCAGGAAACAGAGGTTGCAGTGAGCTGAGATCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS CCA 90 bp CTTCTAGGACAGCATGATGGGGCTCACCAGAGAACCACAGGGACATaGAAAGCACAGAGGAGAAAAGCTGATAGGCAGGAGAGCCTCCGA +
Preference number: 5 (lower is better)
Translates to: LLGQHDGAHQRTTGT*KAQRRKADRQESLR
Trigger: TCGGAGGCTCTCCTGCCTATCAGCTTTTCTCCTCTGTGCTTTCCATGTCCCTGTGGTTCTCTGGTGAGCCCCATCATGCTGTCCTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CAA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCCGCAATCTCGGCCCATaGCAAGCTCCGCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIRNLGP*QAPPPR
Trigger: CCTGGGAGGCGGAGCTTGCAATGGGCCGAGATTGCG...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CAA 90 bp GGAGAAAAGCTGATAGGCAGGAGAGCCTCCGAACAAGGAGACGGGGTGAGTGTACATTGGCACCTTGATTaGGGCCATGAGAAAAATATT +
Preference number: 5 (lower is better)
Translates to: GEKLIGRRASEQGDGVSVHWHLD*GHEKNI
Trigger: AATATTTTTCTCATGGCCCAAATCAAGGTGCCAATG...TACACTCACCCCGTCTCCTTGTTCGGAGGCTCTCCTGCCTATCAGCTTTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CAA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTCCTAGGGATGCTGACTaGTCCAGGGAGCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSPRDAD*SREQVQ
Trigger: CTGCACCTGCTCCCTGGACAAGTCAGCATCCCTAGG...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472992.1
ENST00000612001.4
ENST00000617156.1
CDS-3UTR CAA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTGGGCTCAGGTTCAGGTaGGATGAATGGAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSGLRFR*DEWKQL
Trigger: CAGCTGTTTCCATTCATCCAACCTGAACCTGAGCCC...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CAA 90 bp TCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCTCTATTCTTCCCAGGCTCTaGTATCCGTCTAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: SRNHPRQFPYTQILIAVSILPRL*YPSNPG
Trigger: TCCTGGGTTAGACGGATACAAGAGCCTGGGAAGAAT...AGAGACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000251376.7
ENST00000251377.7
ENST00000391738.8
ENST00000611940.4
ENST00000612001.4
ENST00000613573.4
ENST00000616629.1
ENST00000617409.4
ENST00000620279.4
ENST00000621721.4
ENST00000622640.3
CDS-3UTR CAA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCATTCTTCCCAGGCTCTaGTATCCGTCTAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVILPRL*YPSNPG
Trigger: TCCTGGGTTAGACGGATACAAGAGCCTGGGAAGAAT...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000251376.7
ENST00000251377.7
ENST00000391738.8
ENST00000611940.4
ENST00000612001.4
ENST00000613573.4
ENST00000616629.1
ENST00000617409.4
ENST00000620279.4
ENST00000621721.4
ENST00000622640.3
CDS-3UTR CAA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCGGGCTCAGGTTCAGGTaGGATGAATGGAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIGLRFR*DEWKQL
Trigger: CAGCTGTTTCCATTCATCCAACCTGAACCTGAGCCC...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CAA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCATTCTTCCCAGGCTCTaGTATCCGTCTAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIILPRL*YPSNPG
Trigger: TCCTGGGTTAGACGGATACAAGAGCCTGGGAAGAAT...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CAA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCGTGTCAGAATTTCATTaGACCTGTGCCATAACACTG +
Preference number: 5 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVVSEFH*TCAITL
Trigger: CAGTGTTATGGCACAGGTCAAATGAAATTCTGACAC...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CAA 90 bp TCTTCTAGGAATCACCCCAGACAGTTTCCTTACACTCAAATATTGATTGCTGTCCATTGGCACCTTGATTaGGGCCATGAGAAAAATATT +
Preference number: 5 (lower is better)
Translates to: SSRNHPRQFPYTQILIAVHWHLD*GHEKNI
Trigger: AATATTTTTCTCATGGCCCAAATCAAGGTGCCAATG...GACAGCAATCAATATTTGAGTGTAAGGAAACTGTCTGGGGTGATTCCTAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8
CDS-3UTR CAA 90 bp GTCTCGTTAAGAGGAGTCAAAATGGTGAGTAAATACCGAAATTCTAAGTGGATCGTGTCAGAATTTCATTaGACCTGTGCCATAACACTG +
Preference number: 5 (lower is better)
Translates to: VSLRGVKMVSKYRNSKWIVSEFH*TCAITL
Trigger: CAGTGTTATGGCACAGGTCAAATGAAATTCTGACAC...GATCCACTTAGAATTTCGGTATTTACTCACCATTTTGACTCCTCTTAACGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251376.7
ENST00000391738.8