RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LIG3 (Homo sapiens)

Ensembl gene IDs: ENSG00000005156

Ensembl transcript IDs: ENST00000262327.9, ENST00000378526.9, ENST00000585370.1, ENST00000585740.5, ENST00000585941.5, ENST00000586058.1, ENST00000586119.1, ENST00000586407.1, ENST00000586435.1, ENST00000588109.5, ENST00000588713.1, ENST00000590181.5, ENST00000590630.5, ENST00000592244.1, ENST00000592690.1, ENST00000593099.5

Found 763 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAAACCTCCCTGACCAGGCGCCCAAGGAGCAGGGAAAAGACTACTaGGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCT +
Preference number: 1 (lower is better)
Translates to: TNLPDQAPKEQGKDY*ECSPWENKIMCPSA
Trigger: AGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCTGCTCCTTGGGCGCCTGGTCAGGGAGGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 90 bp CACCCACAGCAACTAATTCCTGGTCCAGAAGAGACAGTGGAGAACTaGTGGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCT +
Preference number: 1 (lower is better)
Translates to: HPQQLIPGPEETVEN*WVWEKQAHSPYTVS
Trigger: AGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCCACCAGTTCTCCACTGTCTCTTCTGGACCAGGAATTAGTTGCTGTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 90 bp CCACAAGCTAATCCTGGGATGTGCACATGGCCTGGGATTAGCCTGTaGTTGGGCCAAGTGACCTTGGTCAAGATGCTCAGTGTTGTTGTA +
Preference number: 1 (lower is better)
Translates to: PQANPGMCTWPGISL*LGQVTLVKMLSVVV
Trigger: TACAACAACACTGAGCATCTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACATCCCAGGATTAGCTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 90 bp CAACTAATTCCTGGTCCAGAAGAGACAGTGGAGAACTGGTGGGTTTaGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTC +
Preference number: 1 (lower is better)
Translates to: QLIPGPEETVENWWV*EKQAHSPYTVSICL
Trigger: GAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCCACCAGTTCTCCACTGTCTCTTCTGGACCAGGAATTAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 90 bp CCACAGCAACTAATTCCTGGTCCAGAAGAGACAGTGGAGAACTGGTaGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATC +
Preference number: 1 (lower is better)
Translates to: PQQLIPGPEETVENW*VWEKQAHSPYTVSI
Trigger: GATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCCACCAGTTCTCCACTGTCTCTTCTGGACCAGGAATTAGTTGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR GCA 90 bp ACCATGGCGCATAACTTTCGAAACTCCCGTAGCAGACAGTCCTTATaGCTGGGGTCACATTTGCTTGAAGACAGACTTCTCTTAGGGGTG +
Preference number: 1 (lower is better)
Translates to: TMAHNFRNSRSRQSL*LGSHLLEDRLLLGV
Trigger: CACCCCTAAGAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCATAAGGACTGTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR CCA 90 bp CCTTTCACTGGAGAAGTCACCTGGCCAGTGGTTGTCAACTTAGCCTaGACAACAGCTTTCTTCTTTGGTGTACCTGCTGCCTTAGAAGAC +
Preference number: 1 (lower is better)
Translates to: PFTGEVTWPVVVNLA*TTAFFFGVPAALED
Trigger: GTCTTCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTTGTCCAGGCTAAGTTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR TCA 90 bp GAGAAGAGAAAGGAATCTTGCCAAAAGGGCATAAAGGATCGAGGATaGGCCACAACACTTTGCTCACATTGCCCTAGGGAGCTGACCTGT +
Preference number: 1 (lower is better)
Translates to: EKRKESCQKGIKDRG*ATTLCSHCPRELTC
Trigger: ACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTGTGGCTCATCCTCGATCCTTTATGCCCTTTTGGCAAGATTCCTTTCTCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 90 bp AAATTGACAACTGATAAACCACAAGCTAATCCTGGGATGTGCACATaGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAG +
Preference number: 1 (lower is better)
Translates to: KLTTDKPQANPGMCT*PGISLWLGQVTLVK
Trigger: CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACATCCCAGGATTAGCTTGTGGTTTATCAGTTGTCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 90 bp TTGGTACTGGTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTaGCCAGTGGTTGTCAACTTAGCCTGGACAACAGCTTTCTTCTTT +
Preference number: 1 (lower is better)
Translates to: LVLVTNEAPFTGEVT*PVVVNLAWTTAFFF
Trigger: AAAGAAGAAAGCTGTTGTCCAGGCTAAGTTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR TCA 90 bp GTCCTTGATCTTATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTaGGAACTGACCCTCAAGAGCTGGAAGGATTGGGACATGGCAGCC +
Preference number: 1 (lower is better)
Translates to: VLDLIGPEPVNLFIR*ELTLKSWKDWDMAA
Trigger: GGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATAAGATCAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR TCA 90 bp TGTTTTCTTTCACATGAGGTTTGTTCCTGGCAAAGCGTGTCAGGCTaGATACAAGTTCCGCTAAACAGAAGCATTTCCGAGGGCAGTCCT +
Preference number: 1 (lower is better)
Translates to: CFLSHEVCSWQSVSG*IQVPLNRSISEGSP
Trigger: AGGACTGCCCTCGGAAATGCTTCTGTTTAGCGGAACTTGTATTCAGCCTGACACGCTTTGCCAGGAACAAACCTCATGTGAAAGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR TCA 90 bp CCATGGAACAACCTAGAAGAGAATGAGAGCTGGGTAGGTAAAGGATaGATCCCAAGACCAATTGGGTTGAAGCACCAAGTGAGTTCAGAT +
Preference number: 1 (lower is better)
Translates to: PWNNLEENESWVGKG*IPRPIGLKHQVSSD
Trigger: ATCTGAACTCACTTGGTGCTTCAACCCAATTGGTCTTGGGATTCATCCTTTACCTACCCAGCTCTCATTCTCTTCTAGGTTGTTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR TCA 90 bp AACAGAAGCATTTCCGAGGGCAGTCCTTTAAATACAACTTTAAAATaGGCCTGGAAGTACAAAGGAACAGGCAAGGATGGGAGAGAAGGC +
Preference number: 1 (lower is better)
Translates to: NRSISEGSPLNTTLK*AWKYKGTGKDGREG
Trigger: GCCTTCTCTCCCATCCTTGCCTGTTCCTTTGTACTTCCAGGCTCATTTTAAAGTTGTATTTAAAGGACTGCCCTCGGAAATGCTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR TCA 90 bp GAGGATGGAATAAAAAGTATCTTATTCCTAATACTGAAGCAAGGCTaGATGGTGCCTATTCAAAAACACCAAATGTCCTGGGCTAGAGTC +
Preference number: 1 (lower is better)
Translates to: EDGIKSILFLILKQG*MVPIQKHQMSWARV
Trigger: GACTCTAGCCCAGGACATTTGGTGTTTTTGAATAGGCACCATTCAGCCTTGCTTCAGTATTAGGAATAAGATACTTTTTATTCCATCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR GCA 90 bp ATTTCAATTGCTCAGCAGCTGTCTGTGGCTAGTTTGGTTGGATACTaGAGATTTATGGATATTTCCACTGCTGCAAAAAGTTCTATTGAA +
Preference number: 1 (lower is better)
Translates to: ISIAQQLSVASLVGY*RFMDISTAAKSSIE
Trigger: TTCAATAGAACTTTTTGCAGCAGTGGAAATATCCATAAATCTGCAGTATCCAACCAAACTAGCCACAGACAGCTGCTGAGCAATTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGGGGCTGGGTCCAGGTTaGAGAGGACAGTGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLGLGPG*RGQCLW
Trigger: CCAAAGGCACTGTCCTCTCCAACCTGGACCCAGCCC...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGATTGCCCTAGGGAGCTaGCCTGTTCAGCACCCAGTG +
Preference number: 2 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLIALGS*PVQHPV
Trigger: CACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAAT...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGAAGGTTGGCCCAGGCTaGGCGCCATGGCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKKVGPG*APWLTP
Trigger: AGGCGTGAGCCATGGCGCCCAGCCTGGGCCAACCTT...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGGGGCGCAGTGGTCCTTaGTCTTATAGGTCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEGRSGP*SYRSRA
Trigger: GGCTCTGGACCTATAAGATCAAGGACCACTGCGCCC...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGACACTTTGCTCACATTaGCCTAGGGAGCTGACCTGT +
Preference number: 2 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLTLCSH*PRELTC
Trigger: ACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGT...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAGGTTGGAGAGGACAGTaGCTTTGGCAGGATCCTGAG +
Preference number: 2 (lower is better)
Translates to: KGQDDHLQPAEALSCECAGWRGQ*LWQDPE
Trigger: CTCAGGATCCTGCCAAAGGCACTGTCCTCTCCAACC...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGAAGAGCTGGAAGGATTaGGACATGGCAGCCAGTTTA +
Preference number: 2 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLKSWKD*DMAASL
Trigger: TAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTT...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGAGACAGCCTTGTTCTaGTGCCCTGTCCGGTTGTTT +
Preference number: 2 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKETALF*CPVRLF
Trigger: AAACAACCGGACAGGGCAGCAGAACAAGGCTGTCTC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGTGTAAGCAGGTTGTATaGATCTGTTCTCAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLCKQVV*ICSQVW
Trigger: CCACACCTGAGAACAGATCCATACAACCTGCTTACA...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATCTCCCGGGTAGGGTCTaGACATGCACACCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYLPGRV*TCTPGV
Trigger: CACTCCTGGTGTGCATGTCCAGACCCTACCCGGGAG...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGCTGACCCTCAAGAGCTaGAAGGATTGGGACATGGCA +
Preference number: 2 (lower is better)
Translates to: TALFCCPVRLFVWPEAEELTLKS*KDWDMA
Trigger: TGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAG...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAAGAGGACAGTGCCTTTaGCAGGATCCTGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: KGQDDHLQPAEALSCECARGQCL*QDPEET
Trigger: TGTCTCCTCAGGATCCTGCCAAAGGCACTGTCCTCT...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCACCCCTCCCTTCAAACTaGGGATCCTCACCATGTAAT +
Preference number: 2 (lower is better)
Translates to: KGQDDHLQPAEALSCECAPLPSN*GSSPCN
Trigger: ATTACATGGTGAGGATCCCCAGTTTGAAGGGAGGGG...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp CTTCACTTTCAGCCAGTGCCGCTTCCCAGGCTCATATGTACCCTTCACATCCTTCCCTCCAATCCCTCCTaGATCACCCGGGTTATCATG +
Preference number: 2 (lower is better)
Translates to: LHFQPVPLPRLICTLHILPSNPS*ITRVIM
Trigger: CATGATAACCCGGGTGATCCAGGAGGGATTGGAGGG...AAGGATGTGAAGGGTACATATGAGCCTGGGAAGCGGCACTGGCTGAAAGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585370.1
3UTR-3UTR TCA 90 bp ACTCCTGGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTGGTACTGGTGACAAATaGGGCGCCTTTCACTGGAGA +
Preference number: 2 (lower is better)
Translates to: TPGSSSFTVRYTSPWKPSGTGDK*GAFHWR
Trigger: TCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACC...AGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCCAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR-3UTR TCA 90 bp ACTCCTGGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTGGGGATTGGTACTGGTaGCAAATGAGGCGCCTTTCA +
Preference number: 2 (lower is better)
Translates to: TPGSSSFTVRYTSPWKPSGDWYW*QMRRLS
Trigger: TGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCC...AGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCCAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR-3UTR GCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCACAGCTTCATTTCAATTaGTCAGCAGCTGTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: KGQDDHLQPAEALSCECAQLHFN*SAAVCG
Trigger: GCCACAGACAGCTGCTGAGCAATTGAAATGAAGCTG...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGAGCAAGGCTGAATGGTaGCTATTCAAAAACACCAAA +
Preference number: 2 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLSKAEW*LFKNTK
Trigger: TTTGGTGTTTTTGAATAGGCACCATTCAGCCTTGCT...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCACTTGTTTCCAGGTTTTaGGGATGCAGATCTTCCTGG +
Preference number: 2 (lower is better)
Translates to: KGQDDHLQPAEALSCECALVSRF*GCRSSW
Trigger: CCAGGAAGATCTGCATCCCCAAAACCTGGAAACAAG...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGGAAGGATTGGGACATaGCAGCCAGTTTACAACCAT +
Preference number: 2 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKGRIGT*QPVYNH
Trigger: ATGGTTGTAAACTGGCTGCCATGTCCCAATCCTTCC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAAAGGGCAAGTGGGGCTaGGTCCAGGTTGGAGAGGAC +
Preference number: 2 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLKGKWG*VQVGED
Trigger: GTCCTCTCCAACCTGGACCCAGCCCCACTTGCCCTT...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp ACTCCTGGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTCTTCCCCAGAGTTGTTaGGCTTGGCTGAAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: TPGSSSFTVRYTSPWKPSLPQSC*AWLKSQ
Trigger: CTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAG...AGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCCAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR CAA 90 bp CAAGCTAATCCTGGGATGTGCACATGGCCTGGGATTAGCCTGTGGTaGGGCCAAGTGACCTTGGTCAAGATGCTCAGTGTTGTTGTAACT +
Preference number: 2 (lower is better)
Translates to: QANPGMCTWPGISLW*GQVTLVKMLSVVVT
Trigger: AGTTACAACAACACTGAGCATCTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACATCCCAGGATTAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGCCAGCAGCTGAGTaGGTCCCTGCAGTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLGPAAE*VPAVSP
Trigger: AGGAGAGACTGCAGGGACTCACTCAGCTGCTGGCCC...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
3UTR-3UTR GCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGGGTAGGGTCTGGACATaGACACCAGGAGTGACGTTC +
Preference number: 2 (lower is better)
Translates to: KREASSILLERFMMMMLRGRVWT*TPGVTF
Trigger: GAACGTCACTCCTGGTGTGCATGTCCAGACCCTACC...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGACAGCAACTAATTCCTaGTCCAGAAGAGACAGTGGA +
Preference number: 2 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKTATNS*SRRDSG
Trigger: TCCACTGTCTCTTCTGGACCAGGAATTAGTTGCTGT...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAACCTTTGGCAGGATCCTaGGGAGACAGCCTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEPLAGS*GDSLVL
Trigger: CAGAACAAGGCTGTCTCCTCAGGATCCTGCCAAAGG...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTAGAGAAGGGACAAGATaGTCACCTGCAGCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCREGTR*SPAASR
Trigger: TCTGCTGGCTGCAGGTGATCATCTTGTCCCTTCTCT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGTGTTGGCTGGAACATaGACACCTGCAACTGAGGGT +
Preference number: 2 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLVLAGT*TPATEG
Trigger: ACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACAC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATACAGCCTTGTTCTGCTaGCCTGTCCGGTTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYTALFC*PVRLFV
Trigger: AACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTACCGGGAAGCAGAGGTTaGAGTGAGCTGAGATTGCAC +
Preference number: 2 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLPGSRG*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCAACCTCTGCTTCCCGG...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp GGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTCCTGCTCTTTGGTGTACCTGCTaGCTTAGAAGACAGATCTGT +
Preference number: 2 (lower is better)
Translates to: GSSSFTVRYTSPWKPSPALWCTC*LRRQIC
Trigger: ACAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAG...AGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR-3UTR GCA 90 bp GGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTCCTGCTCTTCTTTGGTGTACCTaGTGCCTTAGAAGACAGATC +
Preference number: 2 (lower is better)
Translates to: GSSSFTVRYTSPWKPSPALLWCT*CLRRQI
Trigger: GATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAG...AGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR-3UTR GCA 90 bp GCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTCCTGCTGAGCCTTAGCAGACAGTCCTTATaGCTGGGGTCACATTTGCTT +
Preference number: 2 (lower is better)
Translates to: AASLLGTHHRGNHLLLSLSRQSL*LGSHLL
Trigger: AAGCAAATGTGACCCCAGGCATAAGGACTGTCTGCT...AAGGCTCAGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGAGAACTGGTGGGTTTaGGAGAAGCAAGCCCATTCC +
Preference number: 2 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLENWWV*EKQAHS
Trigger: GGAATGGGCTTGCTTCTCCCAAACCCACCAGTTCTC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGGTCCAGAAGAGACAGTaGAGAACTGGTGGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: KREASSILLERFMMMMLRVQKRQ*RTGGFG
Trigger: CCCAAACCCACCAGTTCTCCACTGTCTCTTCTGGAC...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATAGGAACAGGCAAGGATaGGAGAGAAGGCTTTGTGGA +
Preference number: 2 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYRNRQG*ERRLCG
Trigger: TCCACAAAGCCTTCTCTCCCATCCTTGCCTGTTCCT...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATGGATGCAGATCTTCCTaGAGCCCTCTATCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: REKTTENAAPGRTRLCVHGCRSS*SPLSLQ
Trigger: CTGGAGGGATAGAGGGCTCCAGGAAGATCTGCATCC...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTAGCCTGCACTCAGAGTaGAGTGTTGGCTGGAACATG +
Preference number: 2 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCSLHSE*SVGWNM
Trigger: CATGTTCCAGCCAACACTCCACTCTGAGTGCAGGCT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGAAACACCAAATGTCCTaGGCTAGAGTCAGGAAAGTA +
Preference number: 2 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEKHQMS*ARVRKV
Trigger: TACTTTCCTGACTCTAGCCCAGGACATTTGGTGTTT...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATTATCTGCCTCCAGCCTaGGTCCAGTCCAGTAGTATG +
Preference number: 2 (lower is better)
Translates to: REKTTENAAPGRTRLCVHYLPPA*VQSSSM
Trigger: CATACTACTGGACTGGACTCAGGCTGGAGGCAGATA...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGATACTGAAGCAAGGCTaGATGGTGCCTATTCAAAAA +
Preference number: 2 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKILKQG*MVPIQK
Trigger: TTTTTGAATAGGCACCATTCAGCCTTGCTTCAGTAT...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAGAGTGGAGTGTTGGCTaGAACATGCACACCTGCAAC +
Preference number: 2 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEEWSVG*NMHTCN
Trigger: GTTGCAGGTGTGCATGTTCCAGCCAACACTCCACTC...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTCAGAGTGGAGTGTTaGCTGGAACATGCACACCTG +
Preference number: 2 (lower is better)
Translates to: REKTTENAAPGRTRLCVHLRVEC*LEHAHL
Trigger: CAGGTGTGCATGTTCCAGCCAACACTCCACTCTGAG...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp GGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTCCTGCTCAGAGTTGTTGGGCTTaGCTGAAAAGCCAGAAAATT +
Preference number: 2 (lower is better)
Translates to: GSSSFTVRYTSPWKPSPAQSCWA*LKSQKI
Trigger: AATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTG...AGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR CAA 90 bp GCCCAGTTAGGTCTTCAGGTTACCCTGGGAGATACATGGTACCTTTaGGATACAGCTGTAGTACAGCTGGACTATGGCTCAGAAAAGGTT +
Preference number: 2 (lower is better)
Translates to: AQLGLQVTLGDTWYL*DTAVVQLDYGSEKV
Trigger: AACCTTTTCTGAGCCATAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGACCTAACTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTCAAAGCGTGTCAGGCTaGATACAAGTTCCGCTAAAC +
Preference number: 2 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCQSVSG*IQVPLN
Trigger: GTTTAGCGGAACTTGTATTCAGCCTGACACGCTTTG...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAGCACTCCAGCCTGAATaGCAGAGCAAGAGTCTGTTT +
Preference number: 2 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLALQPE*QSKSLF
Trigger: AAACAGACTCTTGCTCTGTCATTCAGGCTGGAGTGC...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTACTTTGTGGACAGAGCTaGCATAGCCCAGCCTTTACT +
Preference number: 2 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLLCGQS*HSPAFT
Trigger: AGTAAAGGCTGGGCTATGGCAGCTCTGTCCACAAAG...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp GCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTCCTGCTGAGCCTTAACAGCTTTCTTCTTTaGTGTACCTGCTGCCTTAGA +
Preference number: 2 (lower is better)
Translates to: AASLLGTHHRGNHLLLSLNSFLL*CTCCLR
Trigger: TCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTT...AAGGCTCAGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR-3UTR GCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAATATACTGTGTCTATCTaGCTCCAGCCTGAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEYTVSI*LQPESS
Trigger: ACTGGACTCAGGCTGGAGGCAGATAGACACAGTATA...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR GCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGAGTTTGGTTGGATACTaGAGATTTATGGATATTTCC +
Preference number: 2 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKSLVGY*RFMDIS
Trigger: GGAAATATCCATAAATCTGCAGTATCCAACCAAACT...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATCCATCTGCTGTGACTaGGAAGAGAAAGGAATCTTG +
Preference number: 2 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLSICCD*EEKGIL
Trigger: CAAGATTCCTTTCTCTTCTCAGTCACAGCAGATGGA...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp TATCGGCCACCATGGCGCATAACTTTCGAAACTCCCGTAGCAGACAGTCCTTATGTTGTCAACTTAGCCTaGACAACAGCTTTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: YRPPWRITFETPVADSPYVVNLA*TTAFFF
Trigger: AAAGAAGAAAGCTGTTGTCCAGGCTAAGTTGACAAC...ATAAGGACTGTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGTGGCCGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR-3UTR TCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAAATTTGTTCATAAGGTaGGAACTGACCCTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: PWENKIMCPSAVTEKRKENLFIR*ELTLKS
Trigger: GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATT...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATGTCTGTGGCTAGTTTaGTTGGATACTGCAGATTTA +
Preference number: 2 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLCLWLV*LDTADL
Trigger: TAAATCTGCAGTATCCAACCAAACTAGCCACAGACA...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp GTGGGGCTGGGTCCAGGTTGGAGAGGACAGTGCCTTTaGCAGGATCCTGAGGAGACAGCCTTGTTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: VGLGPGWRGQCL*QDPEETALFCC
Trigger: GCAGCAGAACAAGGCTGTCTCCTCAGGATCCTGCCAAAGGCACTGTCCTCTCCAACCTGGACCCAGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CAA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCACCTGAGGAGACAGCCTaGTTCTGCTGCCCTGTCCGG +
Preference number: 3 (lower is better)
Translates to: KGQDDHLQPAEALSCECAPEETA*FCCPVR
Trigger: CCGGACAGGGCAGCAGAACAAGGCTGTCTCCTCAGG...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp GTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATaGCTCAGAAAAGGTTGGCCCAGGCTGGGCGCCATG +
Preference number: 3 (lower is better)
Translates to: VPFGYSCSTAGL*LRKGWPRLGAM
Trigger: CATGGCGCCCAGCCTGGGCCAACCTTTTCTGAGCCATAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp AATCCTGGGATGTGCACATGGCCTGGGATTAGCCTGTaGTTGGGCCAAGTGACCTTGGTCAAGATGCTCAGT +
Preference number: 3 (lower is better)
Translates to: NPGMCTWPGISL*LGQVTLVKMLS
Trigger: ACTGAGCATCTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACATCCCAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp ACTGATAAACCACAAGCTAATCCTGGGATGTGCACATaGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACC +
Preference number: 3 (lower is better)
Translates to: TDKPQANPGMCT*PGISLWLGQVT
Trigger: GGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACATCCCAGGATTAGCTTGTGGTTTATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp GTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTaGCCAGTGGTTGTCAACTTAGCCTGGACAACAGCT +
Preference number: 3 (lower is better)
Translates to: VTNEAPFTGEVT*PVVVNLAWTTA
Trigger: AGCTGTTGTCCAGGCTAAGTTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR-3UTR CAA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATGCCCTGTCCGGTTGTTaGTTTGGCCTGAGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: REKTTENAAPGRTRLCVHALSGC*FGLRLK
Trigger: CTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGC...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp CTAATTCCTGGTCCAGAAGAGACAGTGGAGAACTGGTaGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACT +
Preference number: 3 (lower is better)
Translates to: LIPGPEETVENW*VWEKQAHSPYT
Trigger: AGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCCACCAGTTCTCCACTGTCTCTTCTGGACCAGGAATTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp CAACTAATTCCTGGTCCAGAAGAGACAGTGGAGAACTaGTGGGTTTGGGAGAAGCAAGCCCATTCCCCCTAT +
Preference number: 3 (lower is better)
Translates to: QLIPGPEETVEN*WVWEKQAHSPY
Trigger: ATAGGGGGAATGGGCTTGCTTCTCCCAAACCCACCAGTTCTCCACTGTCTCTTCTGGACCAGGAATTAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CAA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGGTGCTTTACATAATGTaGCTCAGGACAACAGGACAA +
Preference number: 3 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEVLYIM*LRTTGQ
Trigger: TTGTCCTGTTGTCCTGAGCAACATTATGTAAAGCAC...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CAA 90 bp GGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTCCTGCTGAAAATTTCCGGGGATaGGTACTGGTGACAAATGAG +
Preference number: 3 (lower is better)
Translates to: GSSSFTVRYTSPWKPSPAENFRG*VLVTNE
Trigger: CTCATTTGTCACCAGTACCAATCCCCGGAAATTTTC...AGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR-3UTR CAA 90 bp ACTCCTGGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTCCAGAGTTGTTGGGCTaGGCTGAAAAGCCAGAAAAT +
Preference number: 3 (lower is better)
Translates to: TPGSSSFTVRYTSPWKPSPELLG*AEKPEN
Trigger: ATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTGG...AGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCCAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR TCA 72 bp CCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCCTaGGTCCAGTCCAGTAGTATGGTAAAGGAGAGTATG +
Preference number: 3 (lower is better)
Translates to: PFPLYCVYLPPA*VQSSSMVKESM
Trigger: CATACTCTCCTTTACCATACTACTGGACTGGACTCAGGCTGGAGGCAGATAGACACAGTATAGGGGGAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR GCA 72 bp TTGACAACTGATAAACCACAAGCTAATCCTGGGATGTaGACATGGCCTGGGATTAGCCTGTGGTTGGGCCAA +
Preference number: 3 (lower is better)
Translates to: LTTDKPQANPGM*TWPGISLWLGQ
Trigger: TTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACATCCCAGGATTAGCTTGTGGTTTATCAGTTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp GCCCAGTTAGGTCTTCAGGTTACCCTGGGAGATACATaGTACCTTTTGGATACAGCTGTAGTACAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: AQLGLQVTLGDT*YLLDTAVVQLD
Trigger: GTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGACCTAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CAA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAACTCAGAGTGGAGTGTaGGCTGGAACATGCACACCT +
Preference number: 3 (lower is better)
Translates to: PWENKIMCPSAVTEKRKETQSGV*AGTCTP
Trigger: AGGTGTGCATGTTCCAGCCAACACTCCACTCTGAGT...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR TCA 72 bp AAGGAATCTTGCCAAAAGGGCATAAAGGATCGAGGATaGGCCACAACACTTTGCTCACATTGCCCTAGGGAG +
Preference number: 3 (lower is better)
Translates to: KESCQKGIKDRG*ATTLCSHCPRE
Trigger: CTCCCTAGGGCAATGTGAGCAAAGTGTTGTGGCTCATCCTCGATCCTTTATGCCCTTTTGGCAAGATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp ATTTTCCTACCTGACCCTAGTCCCCTCCCTTCAAACTaGGGATCCTCACCATGTAATAGGAGAACACAGAGA +
Preference number: 3 (lower is better)
Translates to: IFLPDPSPLPSN*GSSPCNRRTQR
Trigger: TCTCTGTGTTCTCCTATTACATGGTGAGGATCCCCAGTTTGAAGGGAGGGGACTAGGGTCAGGTAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CAA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCCAGCTTCATTTCAATaGCTCAGCAGCTGTCTGTGG +
Preference number: 3 (lower is better)
Translates to: REKTTENAAPGRTRLCVHPASFQ*LSSCLW
Trigger: CCACAGACAGCTGCTGAGCAATTGAAATGAAGCTGG...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR TCA 72 bp TCACATGAGGTTTGTTCCTGGCAAAGCGTGTCAGGCTaGATACAAGTTCCGCTAAACAGAAGCATTTCCGAG +
Preference number: 3 (lower is better)
Translates to: SHEVCSWQSVSG*IQVPLNRSISE
Trigger: CTCGGAAATGCTTCTGTTTAGCGGAACTTGTATTCAGCCTGACACGCTTTGCCAGGAACAAACCTCATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR TCA 72 bp CTAAGGTTAGAGCCATTAAGTTTCAGGAGTCTGATCTaGACTCCGTCTACACCTGCACTGTCCAGTGTGGTA +
Preference number: 3 (lower is better)
Translates to: LRLEPLSFRSLI*TPSTPALSSVV
Trigger: TACCACACTGGACAGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGAAACTTAATGGCTCTAACCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR GCA 72 bp CATAACTTTCGAAACTCCCGTAGCAGACAGTCCTTATaGCTGGGGTCACATTTGCTTGAAGACAGACTTCTC +
Preference number: 3 (lower is better)
Translates to: HNFRNSRSRQSL*LGSHLLEDRLL
Trigger: GAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCATAAGGACTGTCTGCTACGGGAGTTTCGAAAGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
3UTR TCA 72 bp CTTATAGGTCCAGAGCCTGTTAATTTGTTCATAAGGTaGGAACTGACCCTCAAGAGCTGGAAGGATTGGGAC +
Preference number: 3 (lower is better)
Translates to: LIGPEPVNLFIR*ELTLKSWKDWD
Trigger: GTCCCAATCCTTCCAGCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CAA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATCTTGTCTACACTAAATaGTCTCTCTTCCTTTTGTTC +
Preference number: 3 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYLVYTK*SLFLLF
Trigger: GAACAAAAGGAAGAGAGACAATTTAGTGTAGACAAG...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CAA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATGAAGAGAAAGGAATCTaGCCAAAAGGGCATAAAGGA +
Preference number: 3 (lower is better)
Translates to: REKTTENAAPGRTRLCVHEEKGI*PKGHKG
Trigger: TCCTTTATGCCCTTTTGGCAAGATTCCTTTCTCTTC...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR GCA 72 bp GCTCAGCAGCTGTCTGTGGCTAGTTTGGTTGGATACTaGAGATTTATGGATATTTCCACTGCTGCAAAAAGT +
Preference number: 3 (lower is better)
Translates to: AQQLSVASLVGY*RFMDISTAAKS
Trigger: ACTTTTTGCAGCAGTGGAAATATCCATAAATCTGCAGTATCCAACCAAACTAGCCACAGACAGCTGCTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CAA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAACTGCAAAAAGTTCTATaGAATAGCACTTGTCTACAC +
Preference number: 3 (lower is better)
Translates to: PWENKIMCPSAVTEKRKELQKVL*NSTCLH
Trigger: GTGTAGACAAGTGCTATTCAATAGAACTTTTTGCAG...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR-3UTR CAA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATTTATGATGATGATGTaGAGGGCTGCATTGAAATAC +
Preference number: 3 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLFMMMM*RAALKY
Trigger: GTATTTCAATGCAGCCCTCAACATCATCATCATAAA...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CCA 72 bp TCATTTCAATTGCTCAGCAGCTGTCTGTGGCTAGTTTaGTTGGATACTGCAGATTTATGGATATTTCCACTG +
Preference number: 3 (lower is better)
Translates to: SFQLLSSCLWLV*LDTADLWIFPL
Trigger: CAGTGGAAATATCCATAAATCTGCAGTATCCAACCAAACTAGCCACAGACAGCTGCTGAGCAATTGAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGGGGCGCAGTGGTCCTTaGTCTTATAGGTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLGRSGP*SYRSRA
Trigger: GGCTCTGGACCTATAAGATCAAGGACCACTGCGCCC...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGAGCCTCGTGACAGACTaGTGTGTGTGCGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLSLVTD*CVCAGL
Trigger: CAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCT...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGACCTCCTGCGCGTTGTaGAGGACCCGCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEETSCAL*RTRSTT
Trigger: TGTGGTGGAGCGGGTCCTTCACAACGCGCAGGAGGT...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGTCCTGTAGGGCCTGTTaGTGCTCATCCTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLSCRAC*CSSSLV
Trigger: CACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGA...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCACCGGGAGGCGGAGCTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAPGGGA*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAAGCTCCGCCTCCCGG...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGCCCTCCAATCCCTCCTaGATCACCCGGGTTATCATG +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLPSNPS*ITRVIM
Trigger: CATGATAACCCGGGTGATCCAGGAGGGATTGGAGGG...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGGCAGGCGGGCAAGCGTaGCATCATCATGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEAGGQA*HHHGLL
Trigger: CAGGAGGCCATGATGATGCCACGCTTGCCCGCCTGC...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGAGAGAAGGGACAAGATaGTCACCTGCAGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLREGTR*SPAASR
Trigger: TCTGCTGGCTGCAGGTGATCATCTTGTCCCTTCTCT...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGTAGGCCTCGGAACTTaGTCATTACAGGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKVGLGT*SLQAAG
Trigger: GCCCGCGGCCTGTAATGAGCAAGTTCCGAGGCCTAC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCTGCACCACTTCTGGCTaGCAGGGTCGTAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSCTTSG*QGRSSP
Trigger: TGGGCTGCTACGACCCTGGCAGCCAGAAGTGGTGCA...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGCCGTTTCCGGATACATaGCCAAATCCACTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLPFPDT*PNPLWG
Trigger: TCCCCAGAGTGGATTTGGGCATGTATCCGGAAACGG...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGGCAGTGAGCCAAGATTaGGCCACTGCAGTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEAVSQD*ATAVRP
Trigger: AGGCCGGACTGCAGTGGCGCAATCTTGGCTCACTGC...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGCTTCCCCAGAGTTGTTaGGCTTGGCTGAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLLPQSC*AWLKSQ
Trigger: CTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAG...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGTGGCTCAGAAAAGGTTaGCCCAGGCTGGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKWLRKG*PRLGAM
Trigger: CATGGCGCCCAGCCTGGGCCAACCTTTTCTGAGCCA...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGTGCTGGGGTCCTTGCTaGTCTTCACCATGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLCWGPC*SSPCLV
Trigger: AACTAGACATGGTGAAGATCAGCAAGGACCCCAGCA...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCTTTCTTGGTACTGGCTaGGGGCTTGCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSFLGTG*GLAGGL
Trigger: AAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAA...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAATTGCCCTAGGGAGCTaGCCTGTTCAGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAIALGS*PVQHPV
Trigger: CACTGGGTGCTGAACAGGTCAGCTCCCTAGGGCAAT...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCCCCAGTGATGACCTCTaGTTGATGCCAGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSPSDDL*LMPASS
Trigger: GCTGCTGGCTGGCATCAAGCAGAGGTCATCACTGGG...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGAGGCTCTTGGCAGCTaGGGGGAAAGACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKEALGS*GERLAL
Trigger: CAGAGCAAGTCTTTCCCCCCAGCTGCCAAGAGCCTC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGAGGCCTCCGCCAACATaGGCTGCACAGGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEERPPPT*AAQVSS
Trigger: TGATGACACCTGTGCAGCCCATGTTGGCGGAGGCCT...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGGACTCGCTTCATTTCTaGGAACATGATCCGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLDSLHF*EHDPVW
Trigger: CCAAACCGGATCATGTTCTCAGAAATGAAGCGAGTC...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCCTCCAGCCACTACAGTaGAGTCTGCCTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSLQPLQ*SLPSPW
Trigger: CCAAGGAGAAGGCAGACTTCACTGTAGTGGCTGGAG...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAGGACACAGCAGACCCTaGGGGACCCTTATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAGHSRP*GTLILF
Trigger: GAAGAGAATAAGGGTCCCTCAGGGTCTGCTGTGTCC...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCAGGGAAAAGACTACTaGGAATGCAGCCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKQGKDY*ECSPWE
Trigger: CTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCTG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGCACTACAGTGAAGTCTaGCTTCTCCTTGGACAACTG +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLHYSEV*LLLGQL
Trigger: CAGTTGTCCAAGGAGAAGGCAGACTTCACTGTAGTG...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGCAGGTCCCCGTCGAATaGCACAAAGTAGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEQVPVE*HKVASE
Trigger: CTCAGACGCTACTTTGTGGCATTCGACGGGGACCTG...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGAGCCGTGCATGGTGGTaGATGTGGGTAGTCCCAACT +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEESRAWW*MWVVPT
Trigger: AGTTGGGACTACCCACATGCACCACCATGCACGGCT...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCAGCTGTGCCACGCTTaGCATAGTCCACACAGAACC +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKQLCHA*HSPHRT
Trigger: GGTTCTGTGTGGACTATGCCAAGCGTGGCACAGCTG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCAGCTGTGTCGGCCATaGCCCCCTCGTTCAAATAGT +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKQLCRP*PPRSNS
Trigger: ACTATTTGAACGAGGGGGCCATGGCCGACACAGCTG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAGAGACGGCTGAAGTCTaGTGTGGAGGGTGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAETAEV*CGGWQV
Trigger: TACTTGCCACCCTCCACACCAGACTTCAGCCGTCTC...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGAAGGTTGGCCCAGGCTaGGCGCCATGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRKVGPG*APWLTP
Trigger: AGGCGTGAGCCATGGCGCCCAGCCTGGGCCAACCTT...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CAA 72 bp CCTGGGATGTGCACATGGCCTGGGATTAGCCTGTGGTaGGGCCAAGTGACCTTGGTCAAGATGCTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PGMCTWPGISLW*GQVTLVKMLSV
Trigger: AACACTGAGCATCTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACATCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp CGGGGATTGGTACTGGTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGGGTACTGGTGACAAATaGGGCGCCTTTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGLVLVTNEAPFTGEVTWGTGDK*GAFHWR
Trigger: TCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACC...CCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR TCA 90 bp GCCAGTGCCGCTTCCCAGGCTCATATGTACCCTTCACATCCTTCAGCACCAGCCGACTCGCTTCATTTCTaGGAACATGATCCGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ASAASQAHMYPSHPSAPADSLHF*EHDPVW
Trigger: CCAAACCGGATCATGTTCTCAGAAATGAAGCGAGTC...GGCTGGTGCTGAAGGATGTGAAGGGTACATATGAGCCTGGGAAGCGGCACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585370.1
CDS-3UTR TCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGGGTCGTAGCAGCCCATaGGGAAGATTGACATCATGC +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEGRSSP*GRLTSC
Trigger: GCATGATGTCAATCTTCCTCATGGGCTGCTACGACC...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGTCGAGGCCAGGAGTTTaGGACCAGTCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEESRPGV*DQSGQH
Trigger: ATGTTGTCCAGACTGGTCTCAAACTCCTGGCCTCGA...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCTGTGGTTGGGCCAAGTaGCCTTGGTCAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSCGWAK*PWSRCS
Trigger: TGAGCATCTTGACCAAGGTCACTTGGCCCAACCACA...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATCGCTCCACCACATCCTaGAGGTTGCGCGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYRSTTS*RLREAL
Trigger: CAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGCG...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGACATCATGCCGCCTTTaGTCCCTTGCCCATAGAAGG +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKTSCRL*SLAHRR
Trigger: CCTTCTATGGGCAAGGGAGCAAAGGCGGCATGATGT...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGCACTCTGGGGAGACCTaGTGGGCCGCAGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLHSGET*WAAGFL
Trigger: CAAGAACCCTGCGGCCCAGCAGGTCTCCCCAGAGTG...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGCTAATCCTGGGATGTaGACATGGCCTGGGATTAGC +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKANPGM*TWPGIS
Trigger: GCTAATCCCAGGCCATGTGCACATCCCAGGATTAGC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CACTTTCAGCCAGTGCCGCTTCCCAGGCTCATATGTACCCTTCACATCCTTCAGCCCTCCAATCCCTCCTaGATCACCCGGGTTATCATG +
Preference number: 4 (lower is better)
Translates to: HFQPVPLPRLICTLHILQPSNPS*ITRVIM
Trigger: CATGATAACCCGGGTGATCCAGGAGGGATTGGAGGG...CTGAAGGATGTGAAGGGTACATATGAGCCTGGGAAGCGGCACTGGCTGAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585370.1
CDS-3UTR CCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCAGCGAGGGAATCGGATaGAGATCCCGTCAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSSEGIG*RSRQLY
Trigger: ATACAGCTGACGGGATCTCCATCCGATTCCCTCGCT...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATGGCTGAGGGCTTGCTaGGGGCCTTGCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLWLRAC*GPCGTQ
Trigger: CTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCA...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGTGCCCAAATCCACTCTaGGGAGACCTGCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLCPNPL*GDLLGR
Trigger: GCGGCCCAGCAGGTCTCCCCAGAGTGGATTTGGGCA...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGAGAACTGGTGGGTTTaGGAGAAGCAAGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKENWWV*EKQAHS
Trigger: GGAATGGGCTTGCTTCTCCCAAACCCACCAGTTCTC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCAGAGGACAGTGCCTTTaGCAGGATCCTGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSRGQCL*QDPEET
Trigger: TGTCTCCTCAGGATCCTGCCAAAGGCACTGTCCTCT...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGCCAGTGGTTGTCAACGGGGATTGGTACTGGTaGCAAATGAGGCGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: VTNEAPFTGEVTWPVVVNGDWYW*QMRRLS
Trigger: TGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCC...GTTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR TCA 90 bp TTCCGGGGATTGGTACTGGTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCGAAACCATCTCCTGCTaGGCCTTTCCGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: FRGLVLVTNEAPFTGEVTETISC*AFPKEV
Trigger: GACTTCCTTCGGAAAGGCTCAGCAGGAGATGGTTTC...GGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR TCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCCAGCACGTGCGTGGCTaGAGTCATATCAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSQHVRG*SHIKFL
Trigger: CAGGAATTTGATATGACTTCAGCCACGCACGTGCTG...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAGTTGGCCCAGCCTCGTaGCAGACTGCTGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLVGPAS*QTAVCA
Trigger: CGCACACACAGCAGTCTGTCACGAGGCTGGGCCAAC...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGTTGAGCTCAGGAGTTTaGGACCAACCTGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKLSSGV*DQPGQC
Trigger: ACATTGCCCAGGTTGGTCTCAAACTCCTGAGCTCAA...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCCAGTGCCGCTTCCCAGGCTCATATGTACCCTTCACATCCTTCAGCACCAGCCAAGTCCAAAGCTTTCTaGGGGACAAGAGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: ASAASQAHMYPSHPSAPAKSKAF*GTREMC
Trigger: ACACATCTCTCTTGTCCCTCAGAAAGCTTTGGACTT...GGCTGGTGCTGAAGGATGTGAAGGGTACATATGAGCCTGGGAAGCGGCACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585370.1
CDS-3UTR GCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAGTAGGCCTCGGAACTTaGTCATTACAGGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLVGLGT*SLQAAG
Trigger: GCCCGCGGCCTGTAATGAGCAAGTTCCGAGGCCTAC...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGTTCACTTTCAGCCAGTaGCGCTTCCCAGGCTCATAT +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEFTFSQ*RFPGSY
Trigger: ATATGAGCCTGGGAAGCGGCACTGGCTGAAAGTGAA...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTCAGGGTTCTTGTCCCTaGTACCCAGCACGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCQGSCP*YPARAW
Trigger: CCACGCACGTGCTGGGTAGCAGGGACAAGAACCCTG...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCAGGCTTCATAGGCATTaGGGTCAAGGGCGTCTAACA +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSRLHRH*GQGRLT
Trigger: TGTTAGACGCCCTTGACCCCAATGCCTATGAAGCCT...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGGTCATCAGCGAGGCCTaGACGCTCAGAGCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRVISEA*TLRARL
Trigger: GAGACGAGCTCTGAGCGTCCAGGCCTCGCTGATGAC...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCCATTCTTATGCACCTaGACTCGCTCTCCATCGTAC +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKPFLCT*TRSPSY
Trigger: GTACGATGGAGAGCGAGTCCAGGTGCATAAGAATGG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCCTCCCCTACTTTCACTaGAGAAGACTTTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSLPYFH*RRLCGQ
Trigger: CTGGCCACAAAGTCTTCTCCAGTGAAAGTAGGGGAG...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGCCCCTCCCTTCAAACTaGGGATCCTCACCATGTAAT +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEPLPSN*GSSPCN
Trigger: ATTACATGGTGAGGATCCCCAGTTTGAAGGGAGGGG...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTCTCCCGGGTAGGGTCTaGACATGCACACCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCLPGRV*TCTPGV
Trigger: CACTCCTGGTGTGCATGTCCAGACCCTACCCGGGAG...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTATCACCCCCAGACTCTaGGAAGGGATTGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCITPRL*EGIGHH
Trigger: GTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGAT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAAAGTGGGCCACCTTGTaGGGAAGGACGGGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLKWATL*GRTGLR
Trigger: TCTCAAGCCCGTCCTTCCTCACAAGGTGGCCCACTT...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCTCAACCATGTTGTCATaGAGAAACTTCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSSTMLS*RNFRRS
Trigger: TGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGA...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGTCTCACAGGGGCCACTaGAGAGTCCCACATGCAACC +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLSHRGH*RVPHAT
Trigger: GGTTGCATGTGGGACTCTGCAGTGGCCCCTGTGAGA...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCCTTTGGTGTACCTGCTaGCTTAGAAGACAGATCTGC +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSLWCTC*LRRQIC
Trigger: GCAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAG...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGAGCAGACAGTCCTTATaGCTGGGGTCACATTTGCTT +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEESRQSL*LGSHLL
Trigger: AAGCAAATGTGACCCCAGGCATAAGGACTGTCTGCT...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CGGGGATTGGTACTGGTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGAGCAGACAGTCCTTATaGCTGGGGTCACATTTGCTT +
Preference number: 4 (lower is better)
Translates to: RGLVLVTNEAPFTGEVTWSRQSL*LGSHLL
Trigger: AAGCAAATGTGACCCCAGGCATAAGGACTGTCTGCT...CCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR GCA 90 bp CTTTCAGCCAGTGCCGCTTCCCAGGCTCATATGTACCCTTCACATCCTTCAGCATTCACTTTCAGCCAGTaGCGCTTCCCAGGCTCATAT +
Preference number: 4 (lower is better)
Translates to: LSASAASQAHMYPSHPSAFTFSQ*RFPGSY
Trigger: ATATGAGCCTGGGAAGCGGCACTGGCTGAAAGTGAA...TGCTGAAGGATGTGAAGGGTACATATGAGCCTGGGAAGCGGCACTGGCTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585370.1
CDS-3UTR GCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTCATCTCGGATTCGGGTaGAGCGAGGGAATCGGATGG +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCHLGFG*SEGIGW
Trigger: CCATCCGATTCCCTCGCTGCACCCGAATCCGAGATG...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAACTGGAGAAGTCACCTaGCCAGTGGTTGTCAACTTA +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECATGEVT*PVVVNL
Trigger: TAAGTTGACAACCACTGGCCAGGTGACTTCTCCAGT...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CGGGGATTGGTACTGGTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGACTGGAGAAGTCACCTaGCCAGTGGTTGTCAACTTA +
Preference number: 4 (lower is better)
Translates to: RGLVLVTNEAPFTGEVTWTGEVT*PVVVNL
Trigger: TAAGTTGACAACCACTGGCCAGGTGACTTCTCCAGT...CCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp GTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGCCAGTGGTTGTCAACTTCCGAAGGAAGTCCTaGATGATCTGGGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: VTNEAPFTGEVTWPVVVNFRRKS*MIWVFV
Trigger: CACGAAGACCCAGATCATCCAGGACTTCCTTCGGAA...GTTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTGGCTGAGGGCTTGCTaGGGGCCTTGCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLWLRAC*GPCGTQ
Trigger: CTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTACTGCTTTCTTGGTACTaGCTGAGGGCTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLLLSWY*LRACWG
Trigger: CCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAG...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTCTGCTTTCTTGGTACTaGCTGAGGGCTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCLLSWY*LRACWG
Trigger: CCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAG...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAGTCTGGTGTGGAGGGTaGCAAGTAAAGCCGCACCCC +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEVWCGG*QVKPHP
Trigger: GGGGTGCGGCTTTACTTGCCACCCTCCACACCAGAC...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAGGGCTGGGTCCAGGTTaGAGAGGACAGTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLGLGPG*RGQCLW
Trigger: CCAAAGGCACTGTCCTCTCCAACCTGGACCCAGCCC...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATACCAATAAGGGCAAGTaGGGCTGGGTCCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYTNKGK*GWVQVG
Trigger: TCCAACCTGGACCCAGCCCCACTTGCCCTTATTGGT...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGCCTGGGATGTGCACATaGCCTGGGATTAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLPGMCT*PGISLW
Trigger: CCACAGGCTAATCCCAGGCCATGTGCACATCCCAGG...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCAAGCAGATCTGTTTCTaGCCACTGGCTGAATTGTCT +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSKQICF*PLAELS
Trigger: AGACAATTCAGCCAGTGGTCAGAAACAGATCTGCTT...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCCACCATGGCGCATAACTTTCGAAACTCCCGTAGCAGACAGTCCTTATGCCTGGTTGTTGGGCTTGGCTaGAAAGCCAGAAAATTTCCG +
Preference number: 4 (lower is better)
Translates to: ATMAHNFRNSRSRQSLCLVVGLG*KARKFP
Trigger: CGGAAATTTTCTGGCTTTTCAGCCAAGCCCAACAAC...CAGGCATAAGGACTGTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR TCA 90 bp ACTCCTGGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTGAAGGAAGTCCTGGATaGTCTGGGTCTTCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TPGSSSFTVRYTSPWKPSEGSPG*SGSSCC
Trigger: ACAACACGAAGACCCAGATCATCCAGGACTTCCTTC...AGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCCAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR TCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGAAACCATCTCCTGCTaGGCCTTTCCGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYETISC*AFPKEV
Trigger: GACTTCCTTCGGAAAGGCTCAGCAGGAGATGGTTTC...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATGCTCATCCTCCTTGGTaGGCTTGGACAGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHAHPPW*AWTAAE
Trigger: TTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGC...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGGGTTGCGCGAGGCTTTaGAGGCTTCATAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRGCARL*RLHRHW
Trigger: CCAATGCCTATGAAGCCTTCAAAGCCTCGCGCAACC...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAAAGTGGGCCACCTTGTaGGGAAGGACGGGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLKWATL*GRTGLR
Trigger: TCTCAAGCCCGTCCTTCCTCACAAGGTGGCCCACTT...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTACTCCTGCACACTTGGTaGCTGTGCACCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLLLHTW*LCTTSG
Trigger: GCCAGAAGTGGTGCACAGTCACCAAGTGTGCAGGAG...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTAGAATTCAGCCCCTGTaGTCTCCCACACGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCRIQPL*SPTRQL
Trigger: AAGCTGCCGTGTGGGAGATCACAGGGGCTGAATTCT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGCTTGGGGCCAGCAGCTaGGTGAGTCCCTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLLGASS*VSPCSL
Trigger: GAGACTGCAGGGACTCACTCAGCTGCTGGCCCCAAG...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATTGTACAAACCTCCCTaGCCAGGCGCCCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLLYKPP*PGAQGA
Trigger: TGCTCCTTGGGCGCCTGGTCAGGGAGGTTTGTACAA...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATAGCACTTTGGGAGGCTaGGGTGCGTGGATGACTCGA +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHSTLGG*GAWMTR
Trigger: TCGAGTCATCCACGCACCTCAGCCTCCCAAAGTGCT...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGGTGGGAAGACTGCTTaGGCTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLGGKTA*AQEFET
Trigger: GGTCTCAAACTCCTGAGCTCAAGCAGTCTTCCCACC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGACAGATCTGCAATGTaGTGGGTTATCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKDRSAM*WVICSF
Trigger: GAAGGAACAGATAACCCAGCACATTGCAGATCTGTC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCTTCTTTGGTGTACCTaGTGCCTTAGAAGACAGATC +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKLLWCT*CLRRQI
Trigger: GATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTTGTAGGGCCTGTTGCTaGTCATCCTCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCCRACC*SSSLVS
Trigger: GCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACA...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATTCCGCCAACATGGGCTaGACAGGTGTCATCAGCGAG +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHSANMG*TGVISE
Trigger: CTCGCTGATGACACCTGTGCAGCCCATGTTGGCGGA...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTACATACTCAACGGACTTaGAGGCCTCCGCCAACATGG +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLHTQRT*RPPPTW
Trigger: CCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATG...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGCATACTCAACGGACTTaGAGGCCTCCGCCAACATGG +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRHTQRT*RPPPTW
Trigger: CCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATG...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGGTAGGGTCTGGACATaGACACCAGGAGTGACGTTC +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCGRVWT*TPGVTF
Trigger: GAACGTCACTCCTGGTGTGCATGTCCAGACCCTACC...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGGATGATGTTGAGGGCTaGATTGAAATACATGAAAGA +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLDDVEG*IEIHER
Trigger: TCTTTCATGTATTTCAATGCAGCCCTCAACATCATC...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGAAGAGAAAGGAATCTTaGCAAAAGGGCATAAAGGAT +
Preference number: 4 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLKRKES*QKGIKD
Trigger: ATCCTTTATGCCCTTTTGGCAAGATTCCTTTCTCTT...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGCCGGGAAGCAGAGGTTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLPGSRG*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCAACCTCTGCTTCCCGG...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CGGGGATTGGTACTGGTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGTCAGTGAACGATCTCTaGAATGTGCTGGGTTATCTG +
Preference number: 4 (lower is better)
Translates to: RGLVLVTNEAPFTGEVTWSVNDL*NVLGYL
Trigger: CAGATAACCCAGCACATTGCAGAGATCGTTCACTGA...CCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGGCACGTGATCTTAGATaGCTTCCCTGGAATGATAGA +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEARDLR*LPWNDR
Trigger: TCTATCATTCCAGGGAAGCCATCTAAGATCACGTGC...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGAGAAAACAAGGTAGGTaGCACGTGATCTTAGATGGC +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEERKQGR*HVILDG
Trigger: GCCATCTAAGATCACGTGCCACCTACCTTGTTTTCT...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTACAGCTGTGCCACGCTTaGCATAGTCCACACAGAACC +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLQLCHA*HSPHRT
Trigger: GGTTCTGTGTGGACTATGCCAAGCGTGGCACAGCTG...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp TATCGGCCACCATGGCGCATAACTTTCGAAACTCCCGTAGCAGACAGTCCTTATCTTCCCCAGAGTTGTTaGGCTTGGCTGAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: YRPPWRITFETPVADSPYLPQSC*AWLKSQ
Trigger: CTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAG...ATAAGGACTGTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGTGGCCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGATTATCGGCCACCATaGCGCATAACTTTCGAAACT +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKDYRPP*RITFET
Trigger: AGTTTCGAAAGTTATGCGCCATGGTGGCCGATAATC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ACTCCTGGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTAGGTACACATCACCGTaGAAACCATCTCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TPGSSSFTVRYTSPWKPSRYTSP*KPSPAE
Trigger: CTCAGCAGGAGATGGTTTCCACGGTGATGTGTACCT...AGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCCAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp TTCCGGGGATTGGTACTGGTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCAGTCTTAATGACTCCTaGCAGCAGCAGCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: FRGLVLVTNEAPFTGEVTSLNDS*QQQLHC
Trigger: ACAGTGAAGCTGCTGCTGCCAGGAGTCATTAAGACT...GGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCACCGTGCCATATCATCTaGGTTGCAGTTAAAAATGCG +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAPCHII*VAVKNA
Trigger: CGCATTTTTAACTGCAACCCAGATGATATGGCACGG...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGTCATCAGCGAGGCCTaGACGCTCAGAGCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGVISEA*TLRARL
Trigger: GAGACGAGCTCTGAGCGTCCAGGCCTCGCTGATGAC...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTAGCGTGGCATCATCATaGCCTCCTGCACACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCSVASS*PPAHLV
Trigger: CACCAAGTGTGCAGGAGGCCATGATGATGCCACGCT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGCTGGAGAAGACTTTGTaGCCAGCTTCTCCCCCACCT +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLLEKTL*PASPPP
Trigger: AGGTGGGGGAGAAGCTGGCCACAAAGTCTTCTCCAG...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTATCTCTGCTCACTGGCTaGCCGCCTCTTTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLSLLTG*PPLCLA
Trigger: TGCCAAACAAAGAGGCGGCCAGCCAGTGAGCAGAGA...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGCCCTGCAGTCTCTCCTaGCTAGGCCGGGCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGPCSLS*LGRAVL
Trigger: TAGAACAGCCCGGCCTAGCCAGGAGAGACTGCAGGG...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGCAGCCCACGACGGTTaGAGCGCCTGTCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLAAHDG*SACLFK
Trigger: TTTAAAGAGACAGGCGCTCCAACCGTCGTGGGCTGC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCATACCCAGCACGTGCGTaGCTGAAGTCATATCAAATT +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAYPARA*LKSYQI
Trigger: AATTTGATATGACTTCAGCCACGCACGTGCTGGGTA...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCTGTAAGCAGGTTGTATaGATCTGTTCTCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSCKQVV*ICSQVW
Trigger: CCACACCTGAGAACAGATCCATACAACCTGCTTACA...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATAGCCTGCACTCAGAGTaGAGTGTTGGCTGGAACATG +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYSLHSE*SVGWNM
Trigger: CATGTTCCAGCCAACACTCCACTCTGAGTGCAGGCT...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGACCCTGGGAGATACATaGTACCTTTTGGATACAGCT +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEETLGDT*YLLDTA
Trigger: AGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGT...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCCCTTCTGCCCCTCATaGATCCTTGGTTTTAATGAT +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKPFCPS*ILGFND
Trigger: ATCATTAAAACCAAGGATCCATGAGGGGCAGAAGGG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGACAGTTCTTTTCGGCTaGGTGCACGGAGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLTVLFG*VHGGFV
Trigger: CACAAACCCTCCGTGCACTCAGCCGAAAAGAACTGT...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGATCACCCCCAGACTCTaGGAAGGGATTGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGITPRL*EGIGHH
Trigger: GTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGAT...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CTAGGATTATCGGCCACCATGGCGCATAACTTTCGAAACTCCCGTAGCAGACAGGGGGTCACATTTGCTTaGAGACAGACTTCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LGLSATMAHNFRNSRSRQGVTFA*RQTSLR
Trigger: CCTAAGAGAAGTCTGTCTTCAAGCAAATGTGACCCC...CTGTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGTGGCCGATAATCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATACCTCCTGCGCGTTGTaGAGGACCCGCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNTSCAL*RTRSTT
Trigger: TGTGGTGGAGCGGGTCCTTCACAACGCGCAGGAGGT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAGGTCGTAGCAGCCCATaGGGAAGATTGACATCATGC +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLGRSSP*GRLTSC
Trigger: GCATGATGTCAATCTTCCTCATGGGCTGCTACGACC...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATGGGCCAGCAGCTGAGTaGGTCCCTGCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNGPAAE*VPAVSP
Trigger: AGGAGAGACTGCAGGGACTCACTCAGCTGCTGGCCC...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGTCTACTTGGAGGGATTaGGGCTTAGATGTTAACGTA +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKSTWRD*GLDVNV
Trigger: TACGTTAACATCTAAGCCTCAATCCCTCCAAGTAGA...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTACCTTTGGCAGGATCCTaGGGAGACAGCCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLPLAGS*GDSLVL
Trigger: CAGAACAAGGCTGTCTCCTCAGGATCCTGCCAAAGG...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATTGGGAGGCTGAGGCATaGGAATTGCTTGTGAACCCG +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHWEAEA*ELLVNP
Trigger: CGGGTTCACAAGCAATTCTCATGCCTCAGCCTCCCA...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GGATTGGTACTGGTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGCCACTTCTTTGGTGTACCTaGTGCCTTAGAAGACAGATC +
Preference number: 4 (lower is better)
Translates to: GLVLVTNEAPFTGEVTWPLLWCT*CLRRQI
Trigger: GATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAG...TGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR GCA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGGGGAAAGACTTGCTCTaGTCAAAGAAGACTCTGATT +
Preference number: 4 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEGKDLL*SKKTLI
Trigger: AATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCC...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAGGGACATTTCTTCATTaGATACTCAACGGACTTGCA +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAGTFLH*ILNGLA
Trigger: TGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCC...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATTGGTCTCCATTCTTATaGACCTGGACTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYWSPFL*TWTRSP
Trigger: TGGAGAGCGAGTCCAGGTGCATAAGAATGGAGACCA...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATATCATCATGGCCTCCTaGACACTTGGTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYIIMAS*TLGDCA
Trigger: TGCACAGTCACCAAGTGTGCAGGAGGCCATGATGAT...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGCATCTCGGATTCGGGTaGAGCGAGGGAATCGGATGG +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGHLGFG*SEGIGW
Trigger: CCATCCGATTCCCTCGCTGCACCCGAATCCGAGATG...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAGGTTGGAGAGGACAGTaGCTTTGGCAGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEGWRGQ*LWQDPE
Trigger: CTCAGGATCCTGCCAAAGGCACTGTCCTCTCCAACC...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATACACTTTGCTCACATTaGCCTAGGGAGCTGACCTGT +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYTLCSH*PRELTC
Trigger: ACAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGT...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGAGATCTGCAATGTGCTaGGTTATCTGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKRSAMC*VICSFS
Trigger: TGAGAAGGAACAGATAACCCAGCACATTGCAGATCT...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCAGAGTTGTTGGGCTTaGCTGAAAAGCCAGAAAATT +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKQSCWA*LKSQKI
Trigger: AATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CTAGGATTATCGGCCACCATGGCGCATAACTTTCGAAACTCCCGTAGCAGACAGGACAGTCCTTATGCCTaGGGTCACATTTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LGLSATMAHNFRNSRSRQDSPYA*GHICLK
Trigger: CTTCAAGCAAATGTGACCCCAGGCATAAGGACTGTC...CTGTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGTGGCCGATAATCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGCATTGGCTGTACACCTaGAGGCAATGTCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLHWLYT*RQCPVG
Trigger: CCCTACAGGACATTGCCTCCAGGTGTACAGCCAATG...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATGCAGGCGGGCAAGCGTaGCATCATCATGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNAGGQA*HHHGLL
Trigger: CAGGAGGCCATGATGATGCCACGCTTGCCCGCCTGC...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTACACGGCAGCTTTCTTTaGGTCTGGGACGATGAAGTC +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLHGSFL*VWDDEV
Trigger: GACTTCATCGTCCCAGACCCAAAGAAAGCTGCCGTG...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGTCCCTTCTGCTTTCTTaGTACTGGCTGAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRSLLLS*YWLRAC
Trigger: GCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGA...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTATTCCTCTCTGCTCACTaGCTGGCCGCCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLFLSAH*LAASLF
Trigger: AAACAAAGAGGCGGCCAGCCAGTGAGCAGAGAGGAA...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGTCCAGAAGAGACAGTaGAGAACTGGTGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLVQKRQ*RTGGFG
Trigger: CCCAAACCCACCAGTTCTCCACTGTCTCTTCTGGAC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAGGATGCAGATCTTCCTaGAGCCCTCTATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEGCRSS*SPLSLQ
Trigger: CTGGAGGGATAGAGGGCTCCAGGAAGATCTGCATCC...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGCTGACCCTCAAGAGCTaGAAGGATTGGGACATGGCA +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRLTLKS*KDWDMA
Trigger: TGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAG...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAACCTGGGATTAGCCTGTaGTTGGGCCAAGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEPGISL*LGQVTL
Trigger: CAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGG...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGATTAGCCGTGCATGGTaGTGCATGTGGGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLISRAW*CMWVVP
Trigger: TGGGACTACCCACATGCACCACCATGCACGGCTAAT...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGGACACCTGTCCTGTCTaGTGCGAGGATGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRDTCPV*CEDVRG
Trigger: ACCTCTAACATCCTCGCACCAGACAGGACAGGTGTC...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATGGTACTGGTGACAAATaGGGCGCCTTTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHGTGDK*GAFHWR
Trigger: TCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACC...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAGGGGATTGGTACTGGTaGCAAATGAGGCGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLGDWYW*QMRRLS
Trigger: TGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCC...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGCTCAAAGAAGACTCTaGTTGTCTCTGACACGTCAC +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYAQRRL*LSLTRH
Trigger: GTGACGTGTCAGAGACAATCAGAGTCTTCTTTGAGC...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGCTCATCCTCCTTGGTaGGCTTGGACAGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLAHPPW*AWTAAE
Trigger: TTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGC...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGGTTGCGCGAGGCTTTaGAGGCTTCATAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGGCARL*RLHRHW
Trigger: CCAATGCCTATGAAGCCTTCAAAGCCTCGCGCAACC...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTATCCCGTCAGCTGTATaGGCCTCCGATTTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCIPSAV*ASDLEN
Trigger: ATTCTCCAAATCGGAGGCTCATACAGCTGACGGGAT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGGACACAGCAGACCCTaGGGGACCCTTATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGGHSRP*GTLILF
Trigger: GAAGAGAATAAGGGTCCCTCAGGGTCTGCTGTGTCC...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTTTCTTGGTACTGGCTaGGGGCTTGCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLFLGTG*GLAGGL
Trigger: AAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAAAAGCCGCACCCCAGTaGAGATGTCCAGCAATACCT +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEKAAPQ*RCPAIP
Trigger: AGGTATTGCTGGACATCTTCACTGGGGTGCGGCTTT...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATATCTGCCTCCAGCCTaGGTCCAGTCCAGTAGTATG +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLYLPPA*VQSSSM
Trigger: CATACTACTGGACTGGACTCAGGCTGGAGGCAGATA...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAATACTGAAGCAAGGCTaGATGGTGCCTATTCAAAAA +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAILKQG*MVPIQK
Trigger: TTTTTGAATAGGCACCATTCAGCCTTGCTTCAGTAT...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAGAAATCTCTTGGATGTaGATTGTTACTTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAEISWM*IVTSSG
Trigger: GCCACTTGAAGTAACAATTCACATCCAAGAGATTTC...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGTTTATCCCCTTTTGGTaGAGGTTTCCCTTTAGGAAA +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKFIPFW*RFPFRK
Trigger: TTTCCTAAAGGGAAACCTTCACCAAAAGGGGATAAA...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTCTCACAGGGGCCACTaGAGAGTCCCACATGCAACC +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLSHRGH*RVPHAT
Trigger: GGTTGCATGTGGGACTCTGCAGTGGCCCCTGTGAGA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGTCCACACAGAACCGTTaGTCAGCCATCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGSTQNR*SAISQG
Trigger: CCCCTGTGAGATGGCTGAGCAACGGTTCTGTGTGGA...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATGATTGGGCACCACTTTaGCAATTCGGCATACGCCCT +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHDWAPL*QFGIRP
Trigger: AGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATC...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGTCCTGTAGGGCCTGTTaGTGCTCATCCTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGSCRAC*CSSSLV
Trigger: CACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGA...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATCGCTCCACCACATCCTaGAGGTTGCGCGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNRSTTS*RLREAL
Trigger: CAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGCG...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTCCGCCAACATGGGCTaGACAGGTGTCATCAGCGAG +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLSANMG*TGVISE
Trigger: CTCGCTGATGACACCTGTGCAGCCCATGTTGGCGGA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAGGAAGATTGACATCATaGCGCCTTTGCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLGRLTS*RLCSLA
Trigger: GGCAAGGGAGCAAAGGCGGCATGATGTCAATCTTCC...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTGCACCACTTCTGGCTaGCAGGGTCGTAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFCTTSG*QGRSSP
Trigger: TGGGCTGCTACGACCCTGGCAGCCAGAAGTGGTGCA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAATGTCTAGTTCATTCTaGAGGCGGGCAAGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLMSSSF*RRASVA
Trigger: TGCCACGCTTGCCCGCCTGCAGAATGAACTAGACAT...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAGTGTTGGCTGGAACATaGACACCTGCAACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEVLAGT*TPATEG
Trigger: ACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACAC...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGACAGCCTTGTTCTGCTaGCCTGTCCGGTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRTALFC*PVRLFV
Trigger: AACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAGAGACAGCCTTGTTCTaGTGCCCTGTCCGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEETALF*CPVRLF
Trigger: AAACAACCGGACAGGGCAGCAGAACAAGGCTGTCTC...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTACAGACTGCTGTGTGTaGGCAGGCTTGTACAAACCT +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCTDCCV*AGLYKP
Trigger: AGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGTTGAATCCTCCCTTCTaGCCCTCATGGATCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLLNPPF*PSWILG
Trigger: ACCAAGGATCCATGAGGGGCAGAAGGGAGGATTCAA...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCGCATAACTTTCGAAACTCCCGTAGCAGACAGTCCTTATGCCTGGGGTCACATCTTTGGTGTACCTGCTaGCTTAGAAGACAGATCTGT +
Preference number: 4 (lower is better)
Translates to: AHNFRNSRSRQSLCLGSHLWCTC*LRRQIC
Trigger: ACAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAG...ATGTGACCCCAGGCATAAGGACTGTCTGCTACGGGAGTTTCGAAAGTTATGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp GTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGCCAGTGGTTGTCAACAACAGCTTTCTTCTTTaGTGTACCTGCTGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: VTNEAPFTGEVTWPVVVNNSFLL*CTCCLR
Trigger: TCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTT...GTTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCGTTGTCAACTTAGCCTaGACAACAGCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GFGRSKPIPPILCLSASSVVNLA*TTAFFF
Trigger: AAAGAAGAAAGCTGTTGTCCAGGCTAAGTTGACAAC...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GGATTGGTACTGGTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGCCACAGAGTTGTTGGGCTTaGCTGAAAAGCCAGAAAATT +
Preference number: 4 (lower is better)
Translates to: GLVLVTNEAPFTGEVTWPQSCWA*LKSQKI
Trigger: AATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTG...TGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGTTCCGAAGGAAGTCCTaGATGATCTGGGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRFRRKS*MIWVFV
Trigger: CACGAAGACCCAGATCATCCAGGACTTCCTTCGGAA...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGAGGTACACATCACCGTaGAAACCATCTCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRRYTSP*KPSPAE
Trigger: CTCAGCAGGAGATGGTTTCCACGGTGATGTGTACCT...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGCTGGAGAAGACTTTGTaGCCAGCTTCTCCCCCACCT +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGLEKTL*PASPPP
Trigger: AGGTGGGGGAGAAGCTGGCCACAAAGTCTTCTCCAG...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTACTCCCCTACTTTCACTaGAGAAGACTTTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLLPYFH*RRLCGQ
Trigger: CTGGCCACAAAGTCTTCTCCAGTGAAAGTAGGGGAG...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAACTCAGAGTGGAGTGTTaGCTGGAACATGCACACCTG +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKELRVEC*LEHAHL
Trigger: CAGGTGTGCATGTTCCAGCCAACACTCCACTCTGAG...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGGTCCGGTTGTTTGTTTaGCCTGAGGCTGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRVRLFV*PEAEER
Trigger: TCTCTCTTCAGCCTCAGGCCAAACAAACAACCGGAC...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTATTTCTGACCACTGGCTaGATTGTCTTACATCACGCC +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLFLTTG*IVLHHA
Trigger: GGCGTGATGTAAGACAATTCAGCCAGTGGTCAGAAA...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGGGGTCACATTTGCTTaGAGACAGACTTCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLGVTFA*RQTSLR
Trigger: CCTAAGAGAAGTCTGTCTTCAAGCAAATGTGACCCC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAGAAGGAAGTCCTGGATaGTCTGGGTCTTCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLEGSPG*SGSSCC
Trigger: ACAACACGAAGACCCAGATCATCCAGGACTTCCTTC...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAGCTCTCCATCGTACTTaGTCTCAGAGAACATGCCAT +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLALHRT*SQRTCH
Trigger: ATGGCATGTTCTCTGAGATCAAGTACGATGGAGAGC...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGCTCTCCATCGTACTTaGTCTCAGAGAACATGCCAT +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLALHRT*SQRTCH
Trigger: ATGGCATGTTCTCTGAGATCAAGTACGATGGAGAGC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGCCCATGAGGAAGATTaGCATCATGCCGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGAHEED*HHAAFA
Trigger: AGCAAAGGCGGCATGATGTCAATCTTCCTCATGGGC...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTCTCCTGCACACTTGGTaGCTGTGCACCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFLLHTW*LCTTSG
Trigger: GCCAGAAGTGGTGCACAGTCACCAAGTGTGCAGGAG...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTCCCAGCACCCAGCTCTaGAAGATCTATTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCPSTQL*KIYLNQ
Trigger: CTGGTTTAAATAGATCTTTCAGAGCTGGGTGCTGGG...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATTCCATCTGCTGTGACTaGGAAGAGAAAGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYSICCD*EEKGIL
Trigger: CAAGATTCCTTTCTCTTCTCAGTCACAGCAGATGGA...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGTTTTGCAGCCAGCTGTaGCACGCTTGGCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGFCSQL*HAWHSP
Trigger: TGGACTATGCCAAGCGTGGCACAGCTGGCTGCAAAA...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTGTAGGGCCTGTTGCTaGTCATCCTCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLCRACC*SSSLVS
Trigger: GCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGACATCATGCCGCCTTTaGTCCCTTGCCCATAGAAGG +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGTSCRL*SLAHRR
Trigger: CCTTCTATGGGCAAGGGAGCAAAGGCGGCATGATGT...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGATGTCTAGTTCATTCTaGAGGCGGGCAAGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGMSSSF*RRASVA
Trigger: TGCCACGCTTGCCCGCCTGCAGAATGAACTAGACAT...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTACACTACAGTGAAGTCTaGCTTCTCCTTGGACAACTG +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLHYSEV*LLLGQL
Trigger: CAGTTGTCCAAGGAGAAGGCAGACTTCACTGTAGTG...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAGAAGGCTTTGCAGTCTaGATGTTGCCATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLEGFAV*MLPSLL
Trigger: CAGCAAAGATGGCAACATGCAGACTGCAAAGCCTTC...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAACATAGCGGAAGGCTTTaGAGTCTGCATGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEHSGRL*SLHVAI
Trigger: GATGGCAACATGCAGACTGCAAAGCCTTCCGCTATG...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATACAGTTCTTCCTCTCTaGTCACTGGCTGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNTVLPL*SLAGRL
Trigger: GAGGCGGCCAGCCAGTGAGCAGAGAGGAAGAACTGT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGGCTGTTCTATCTCCTaGCTGCTGGCACAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGGCSIS*LLAQFF
Trigger: GAAGAACTGTGCCAGCAGGCAGGAGATAGAACAGCC...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGTATACTGTGTCTATCTaGCTCCAGCCTGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLYTVSI*LQPESS
Trigger: ACTGGACTCAGGCTGGAGGCAGATAGACACAGTATA...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGACTCTGAGAAGGGATTaGGCACCACTTTGCCAATTC +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLTLRRD*APLCQF
Trigger: GAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGT...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACAGTCCTTATGCCTaGGGTCACATTTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCDSPYA*GHICLK
Trigger: CTTCAAGCAAATGTGACCCCAGGCATAAGGACTGTC...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp TATCGGCCACCATGGCGCATAACTTTCGAAACTCCCGTAGCAGACAGTCCTTATGATTATCGGCCACCATaGCGCATAACTTTCGAAACT +
Preference number: 4 (lower is better)
Translates to: YRPPWRITFETPVADSPYDYRPP*RITFET
Trigger: AGTTTCGAAAGTTATGCGCCATGGTGGCCGATAATC...ATAAGGACTGTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGTGGCCGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGAGGCTCTTGGCAGCTaGGGGGAAAGACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFEALGS*GERLAL
Trigger: CAGAGCAAGTCTTTCCCCCCAGCTGCCAAGAGCCTC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGAACTCATCCACTTCCTaGATGGTAAGGAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRNSSTS*MVRRLL
Trigger: CAAGAGCCTCCTTACCATCCAGGAAGTGGATGAGTT...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATAGGCCTCCGCCAACATaGGCTGCACAGGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNRPPPT*AAQVSS
Trigger: TGATGACACCTGTGCAGCCCATGTTGGCGGAGGCCT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAAGTCTGCCTTCTCCTTaGACAACTGGTACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLSLPSP*TTGTVP
Trigger: AGGAACTGTACCAGTTGTCCAAGGAGAAGGCAGACT...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAAGGAACAGGCAAGGATaGGAGAGAAGGCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLRNRQG*ERRLCG
Trigger: TCCACAAAGCCTTCTCTCCCATCCTTGCCTGTTCCT...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTAAGGGCAAGTGGGGCTaGGTCCAGGTTGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIKGKWG*VQVGED
Trigger: GTCCTCTCCAACCTGGACCCAGCCCCACTTGCCCTT...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCCAGTCTGGACAACATaGCGAAACGTGGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHPVWTT*RNVVST
Trigger: AGTAGAGACCACGTTTCGCCATGTTGTCCAGACTGG...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAAGTACAGCTGGACTATaGCTCAGAAAAGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLSTAGL*LRKGWP
Trigger: GGGCCAACCTTTTCTGAGCCATAGTCCAGCTGTACT...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGTCTTCAGGTTACCCTaGGAGATACATGGTACCTTT +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYVFRLP*EIHGTF
Trigger: AAAGGTACCATGTATCTCCCAGGGTAACCTGAAGAC...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCACACAAATGTAATATATaGAAGAGGCCATGGAACAAC +
Preference number: 4 (lower is better)
Translates to: KGQDDHLQPAEALSCECAHKCNI*KRPWNN
Trigger: GTTGTTCCATGGCCTCTTCCATATATTACATTTGTG...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGTTTCTCAGACTTACTTaGAGGTTAAAGCAAACCCAA +
Preference number: 4 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKFLRLT*RLKQTQ
Trigger: TTGGGTTTGCTTTAACCTCCAAGTAAGTCTGAGAAA...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGACAGTTCTTTTCGGCTaGGTGCACGGAGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLTVLFG*VHGGFV
Trigger: CACAAACCCTCCGTGCACTCAGCCGAAAAGAACTGT...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAATTTCTGACCACTGGCTaGATTGTCTTACATCACGCC +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEFLTTG*IVLHHA
Trigger: GGCGTGATGTAAGACAATTCAGCCAGTGGTCAGAAA...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGTACTGGTGACAAATaGGGCGCCTTTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLGTGDK*GAFHWR
Trigger: TCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACC...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGATTGGTACTGGTaGCAAATGAGGCGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLGDWYW*QMRRLS
Trigger: TGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCC...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGAAGGAAGTCCTGGATaGTCTGGGTCTTCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGEGSPG*SGSSCC
Trigger: ACAACACGAAGACCCAGATCATCCAGGACTTCCTTC...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGAAACCATCTCCTGCTaGGCCTTTCCGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLETISC*AFPKEV
Trigger: GACTTCCTTCGGAAAGGCTCAGCAGGAGATGGTTTC...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CACTTTCAGCCAGTGCCGCTTCCCAGGCTCATATGTACCCTTCACATCCTTCAGTCATTTCTGAGAACATaGTCCGGTTTGGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: HFQPVPLPRLICTLHILQSFLRT*SGLEFQ
Trigger: TTGAAATTCCAAACCGGATCATGTTCTCAGAAATGA...CTGAAGGATGTGAAGGGTACATATGAGCCTGGGAAGCGGCACTGGCTGAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585370.1
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATTGGGTCTGGGACGATaGAGTCAGGATAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLLGLGR*SQDSRS
Trigger: AGATCTACTATCCTGACTTCATCGTCCCAGACCCAA...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATAGAATTCAGCCCCTGTaGTCTCCCACACGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNRIQPL*SPTRQL
Trigger: AAGCTGCCGTGTGGGAGATCACAGGGGCTGAATTCT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATCTCCAGCCACTACAGTaGAGTCTGCCTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNLQPLQ*SLPSPW
Trigger: CCAAGGAGAAGGCAGACTTCACTGTAGTGGCTGGAG...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGATAAAGGATCGAGGATaGGCCACAACACTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRIKDRG*ATTLCS
Trigger: TGAGCAAAGTGTTGTGGCTCATCCTCGATCCTTTAT...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTTGTGTCCATCTGCTGTaGCTGAGAAGAGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCCVHLL*LRRERN
Trigger: ATTCCTTTCTCTTCTCAGTCACAGCAGATGGACACA...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATTTCTTTTCGGCTGAGTaGACGGAGGGTTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHFFSAE*TEGLWK
Trigger: TTTCCACAAACCCTCCGTGCACTCAGCCGAAAAGAA...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAGACAGATCTGCAATGTaGTGGGTTATCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLDRSAM*WVICSF
Trigger: GAAGGAACAGATAACCCAGCACATTGCAGATCTGTC...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGCATGTTGCCATCTTTaGTGTTGGAGTTACTCAGCT +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLACCHL*CWSYSA
Trigger: AGCTGAGTAACTCCAACAGCAAAGATGGCAACATGC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTTTGCAGTCTGCATGTTaGCATCTTTGCTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCLQSAC*HLCCWS
Trigger: ACTCCAACAGCAAAGATGGCAACATGCAGACTGCAA...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAGAAGGCTTTGCAGTCTaGATGTTGCCATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEEGFAV*MLPSLL
Trigger: CAGCAAAGATGGCAACATGCAGACTGCAAAGCCTTC...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGTGCACGGAGGGTTTGTaGAAAGAAGATCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRCTEGL*KEDLES
Trigger: GCTTTCAAGATCTTCTTTCCACAAACCCTCCGTGCA...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp ACTCCTGGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTGTTGTCAACTTAGCCTaGACAACAGCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TPGSSSFTVRYTSPWKPSVVNLA*TTAFFF
Trigger: AAAGAAGAAAGCTGTTGTCCAGGCTAAGTTGACAAC...AGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCCAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGCTTCCCCAGAGTTGTTaGGCTTGGCTGAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLLPQSC*AWLKSQ
Trigger: CTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAG...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAGATTATCGGCCACCATaGCGCATAACTTTCGAAACT +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLDYRPP*RITFET
Trigger: AGTTTCGAAAGTTATGCGCCATGGTGGCCGATAATC...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGAGGTACACATCACCGTaGAAACCATCTCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGRYTSP*KPSPAE
Trigger: CTCAGCAGGAGATGGTTTCCACGGTGATGTGTACCT...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGAGGCTTCATAGGCATTaGGGTCAAGGGCGTCTAACA +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGRLHRH*GQGRLT
Trigger: TGTTAGACGCCCTTGACCCCAATGCCTATGAAGCCT...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGCAGACATTAGCATCCTaGAAGGCTGCTTTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRQTLAS*KAAFLC
Trigger: ACACAAGAAAGCAGCCTTCCAGGATGCTAATGTCTG...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CTTCACTTTCAGCCAGTGCCGCTTCCCAGGCTCATATGTACCCTTCACATCCTTGAACATGATCCGGTTTaGAATTTCAACCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: LHFQPVPLPRLICTLHILEHDPV*NFNHVV
Trigger: GACAACATGGTTGAAATTCCAAACCGGATCATGTTC...AAGGATGTGAAGGGTACATATGAGCCTGGGAAGCGGCACTGGCTGAAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585370.1
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTCCCTCCAATCCCTCCTaGATCACCCGGGTTATCATG +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFPSNPS*ITRVIM
Trigger: CATGATAACCCGGGTGATCCAGGAGGGATTGGAGGG...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTCAGCTGTGTCGGCCATaGCCCCCTCGTTCAAATAGT +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFQLCRP*PPRSNS
Trigger: ACTATTTGAACGAGGGGGCCATGGCCGACACAGCTG...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTAGCGTGGCATCATCATaGCCTCCTGCACACTTGGTG +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFSVASS*PPAHLV
Trigger: CACCAAGTGTGCAGGAGGCCATGATGATGCCACGCT...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGAGCTTTCTTTGGGTCTaGGACGATGAAGTCAGGATA +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRSFLWV*DDEVRI
Trigger: TATCCTGACTTCATCGTCCCAGACCCAAAGAAAGCT...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTTACAGTTCCTTGAGTTaGGGAAGGTTAGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCYSSLS*GRLVAD
Trigger: ATCTGCCACTAACCTTCCCCAACTCAAGGAACTGTA...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGTTCTCCTTGGACAACTaGTACAGTTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLFSLDN*YSSLSW
Trigger: CCAACTCAAGGAACTGTACCAGTTGTCCAAGGAGAA...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAAGTCTGCCTTCTCCTTaGACAACTGGTACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKESLPSP*TTGTVP
Trigger: AGGAACTGTACCAGTTGTCCAAGGAGAAGGCAGACT...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGACAGCAACTAATTCCTaGTCCAGAAGAGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRTATNS*SRRDSG
Trigger: TCCACTGTCTCTTCTGGACCAGGAATTAGTTGCTGT...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATGGAAGGATTGGGACATaGCAGCCAGTTTACAACCAT +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHGRIGT*QPVYNH
Trigger: ATGGTTGTAAACTGGCTGCCATGTCCCAATCCTTCC...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAAAGAGCTGGAAGGATTaGGACATGGCAGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEKSWKD*DMAASL
Trigger: TAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTT...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAAGTTTGAGACCAGTCTaGACAACATGGCGAAACGTG +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLSLRPV*TTWRNV
Trigger: CACGTTTCGCCATGTTGTCCAGACTGGTCTCAAACT...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGCTTACATCACGCCAGTaGTGTTTTCGGAATAGGCAC +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGLTSRQ*CFRNRH
Trigger: GTGCCTATTCCGAAAACATCACTGGCGTGATGTAAG...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGTTGGGTCTGGGACGATaGAGTCAGGATAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGLGLGR*SQDSRS
Trigger: AGATCTACTATCCTGACTTCATCGTCCCAGACCCAA...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTTCCACACAGAACCGTTaGTCAGCCATCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSISTQNR*SAISQG
Trigger: CCCCTGTGAGATGGCTGAGCAACGGTTCTGTGTGGA...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGATTGGGCACCACTTTaGCAATTCGGCATACGCCCT +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFDWAPL*QFGIRP
Trigger: AGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAACAAAGGGCAGTGGTTTaGCTGTCTTGTTGTCAATCA +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEQRAVV*LSCCQS
Trigger: TGATTGACAACAAGACAGGCAAACCACTGCCCTTTG...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATGGAAGATTGACATCATaGCGCCTTTGCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNGRLTS*RLCSLA
Trigger: GGCAAGGGAGCAAAGGCGGCATGATGTCAATCTTCC...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGCATAGCGGAAGGCTTTaGAGTCTGCATGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLHSGRL*SLHVAI
Trigger: GATGGCAACATGCAGACTGCAAAGCCTTCCGCTATG...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATTCTGTTTCTGACCACTaGCTGAATTGTCTTACATCA +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYSVSDH*LNCLTS
Trigger: TGATGTAAGACAATTCAGCCAGTGGTCAGAAACAGA...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTAACAGCTTTCTTCTTTaGTGTACCTGCTGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCNSFLL*CTCCLR
Trigger: TCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGAGTCTTAATGACTCCTaGCAGCAGCAGCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGSLNDS*QQQLHC
Trigger: ACAGTGAAGCTGCTGCTGCCAGGAGTCATTAAGACT...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATCATTGGCTGTACACCTaGAGGCAATGTCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNHWLYT*RQCPVG
Trigger: CCCTACAGGACATTGCCTCCAGGTGTACAGCCAATG...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATAGCGAGGGAATCGGATaGAGATCCCGTCAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNSEGIG*RSRQLY
Trigger: ATACAGCTGACGGGATCTCCATCCGATTCCCTCGCT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTCCCTTCTGCTTTCTTaGTACTGGCTGAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFSLLLS*YWLRAC
Trigger: GCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATTGCCATCTTTGCTGTTaGAGTTACTCAGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHCHLCC*SYSASL
Trigger: AAGGGAAGCTGAGTAACTCCAACAGCAAAGATGGCA...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGAAACACCAAATGTCCTaGGCTAGAGTCAGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRKHQMS*ARVRKV
Trigger: TACTTTCCTGACTCTAGCCCAGGACATTTGGTGTTT...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAAATCCCAAGACCAATTaGGTTGAAGCACCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKENPKTN*VEAPSE
Trigger: CTCACTTGGTGCTTCAACCCAATTGGTCTTGGGATT...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGTGGAAAGAAGATCTTaGAAGCCAAAGACATATAGC +
Preference number: 4 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLVERRS*KPKTYS
Trigger: GCTATATGTCTTTGGCTTTCAAGATCTTCTTTCCAC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTACACATGTTTTGCACCTaGGTTCATCTTCAGATCATG +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLHMFCT*VHLQIM
Trigger: CATGATCTGAAGATGAACTCAGGTGCAAAACATGTG...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTCAACCATGTTGTCATaGAGAAACTTCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLSTMLS*RNFRRS
Trigger: TGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGACTCGCTTCATTTCTaGGAACATGATCCGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLDSLHF*EHDPVW
Trigger: CCAAACCGGATCATGTTCTCAGAAATGAAGCGAGTC...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATAGTCCAAAGCTTTTGTaGCTCGCTTCATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHSPKLL*LASFLR
Trigger: TCTCAGAAATGAAGCGAGTCACAAAAGCTTTGGACT...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTGCCCATGAGGAAGATTaGCATCATGCCGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIAHEED*HHAAFA
Trigger: AGCAAAGGCGGCATGATGTCAATCTTCCTCATGGGC...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTGCTGGGGTCCTTGCTaGTCTTCACCATGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNCWGPC*SSPCLV
Trigger: AACTAGACATGGTGAAGATCAGCAAGGACCCCAGCA...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATATCCCGTCAGCTGTATaGGCCTCCGATTTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNIPSAV*ASDLEN
Trigger: ATTCTCCAAATCGGAGGCTCATACAGCTGACGGGAT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAAATTTGTTCATAAGGTaGGAACTGACCCTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLNLFIR*ELTLKS
Trigger: GCTCTTGAGGGTCAGTTCTCACCTTATGAACAAATT...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTTCTTTTCGGCTGAGTaGACGGAGGGTTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLFFSAE*TEGLWK
Trigger: TTTCCACAAACCCTCCGTGCACTCAGCCGAAAAGAA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATCTGCAGAGTCCCACATaGAACCCTGGCAAGAAAACA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNLQSPT*NPGKKT
Trigger: TGTTTTCTTGCCAGGGTTGCATGTGGGACTCTGCAG...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTTTTTGCAGCCAGCTGTaGCACGCTTGGCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIFCSQL*HAWHSP
Trigger: TGGACTATGCCAAGCGTGGCACAGCTGGCTGCAAAA...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGCTTTGGTGTACCTGCTaGCTTAGAAGACAGATCTGC +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLLWCTC*LRRQIC
Trigger: GCAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAG...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGCTTCTTTGGTGTACCTaGTGCCTTAGAAGACAGATC +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGLLWCT*CLRRQI
Trigger: GATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAG...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGAGCAGACAGTCCTTATaGCTGGGGTCACATTTGCTT +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLSRQSL*LGSHLL
Trigger: AAGCAAATGTGACCCCAGGCATAAGGACTGTCTGCT...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTGGTCTCCATTCTTATaGACCTGGACTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNWSPFL*TWTRSP
Trigger: TGGAGAGCGAGTCCAGGTGCATAAGAATGGAGACCA...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTTCACTTTCAGCCAGTaGCGCTTCCCAGGCTCATAT +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFFTFSQ*RFPGSY
Trigger: ATATGAGCCTGGGAAGCGGCACTGGCTGAAAGTGAA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATATCATCATGGCCTCCTaGACACTTGGTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNIIMAS*TLGDCA
Trigger: TGCACAGTCACCAAGTGTGCAGGAGGCCATGATGAT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATCCACAAACTCAATGCTaGATTCCCACACCCAGACTG +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNPQTQC*IPTPRL
Trigger: CAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGG...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTCTGCTACCCAGCACGTaGGTGGCTGAAGTCATATCA +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSILLPST*VAEVIS
Trigger: TGATATGACTTCAGCCACGCACGTGCTGGGTAGCAG...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGCACGTGATCTTAGATaGCTTCCCTGGAATGATAGA +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGARDLR*LPWNDR
Trigger: TCTATCATTCCAGGGAAGCCATCTAAGATCACGTGC...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAGTTGTCAACTTAGCCTaGACAACAGCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLVVNLA*TTAFFF
Trigger: AAAGAAGAAAGCTGTTGTCCAGGCTAAGTTGACAAC...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGACAGTCCTTATGCCTaGGGTCACATTTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLDSPYA*GHICLK
Trigger: CTTCAAGCAAATGTGACCCCAGGCATAAGGACTGTC...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTTCCGAAGGAAGTCCTaGATGATCTGGGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFFRRKS*MIWVFV
Trigger: CACGAAGACCCAGATCATCCAGGACTTCCTTCGGAA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGAACTCATCCACTTCCTaGATGGTAAGGAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLNSSTS*MVRRLL
Trigger: CAAGAGCCTCCTTACCATCCAGGAAGTGGATGAGTT...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTACAGAGAACATGCCATTaGGACATTTCTTCATTGCAT +
Preference number: 4 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLQRTCH*DISSLH
Trigger: ATGCAATGAAGAAATGTCCCAATGGCATGTTCTCTG...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTCAGAGAACATGCCATTaGGACATTTCTTCATTGCAT +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCQRTCH*DISSLH
Trigger: ATGCAATGAAGAAATGTCCCAATGGCATGTTCTCTG...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTCCATTCTTATGCACCTaGACTCGCTCTCCATCGTAC +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFPFLCT*TRSPSY
Trigger: GTACGATGGAGAGCGAGTCCAGGTGCATAAGAATGG...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGAGCTTTCTTTGGGTCTaGGACGATGAAGTCAGGATA +
Preference number: 4 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGSFLWV*DDEVRI
Trigger: TATCCTGACTTCATCGTCCCAGACCCAAAGAAAGCT...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTCACGGCAGCTTTCTTTaGGTCTGGGACGATGAAGTC +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIHGSFL*VWDDEV
Trigger: GACTTCATCGTCCCAGACCCAAAGAAAGCTGCCGTG...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTGAGTGGAGTGTTGGCTaGAACATGCACACCTGCAAC +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIEWSVG*NMHTCN
Trigger: GTTGCAGGTGTGCATGTTCCAGCCAACACTCCACTC...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CAA 72 bp AACTTCAGTTCCTTAGTTGTGCCAGCTTCATTTCAATaGCTCAGCAGCTGTCTGTGGCTAGTTTGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: NFSSLVVPASFQ*LSSCLWLVWLD
Trigger: ATCCAACCAAACTAGCCACAGACAGCTGCTGAGCAATTGAAATGAAGCTGGCACAACTAAGGAACTGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATGTTGTTGGGCTTGGCTaGAAAGCCAGAAAATTTCCG +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNVVGLG*KARKFP
Trigger: CGGAAATTTTCTGGCTTTTCAGCCAAGCCCAACAAC...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGGGGTCACATTTGCTTaGAGACAGACTTCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFGVTFA*RQTSLR
Trigger: CCTAAGAGAAGTCTGTCTTCAAGCAAATGTGACCCC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATGCTCAAAGAAGACTCTaGTTGTCTCTGACACGTCAC +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNAQRRL*LSLTRH
Trigger: GTGACGTGTCAGAGACAATCAGAGTCTTCTTTGAGC...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGTCATTTCTGAGAACATaGTCCGGTTTGGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: KREASSILLERFMMMMLRSFLRT*SGLEFQ
Trigger: TTGAAATTCCAAACCGGATCATGTTCTCAGAAATGA...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTGCACTCCAGCCTGAATaGCAGAGCAAGAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIALQPE*QSKSLF
Trigger: AAACAGACTCTTGCTCTGTCATTCAGGCTGGAGTGC...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTCAAAAGACAGATAGCTaGCTGGTTCATAATACATTG +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCQKTDS*LVHNTL
Trigger: CAATGTATTATGAACCAGTCAGCTATCTGTCTTTTG...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTCTTTGTGGACAGAGCTaGCATAGCCCAGCCTTTACT +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSILCGQS*HSPAFT
Trigger: AGTAAAGGCTGGGCTATGGCAGCTCTGTCCACAAAG...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATAGTTTGGTTGGATACTaGAGATTTATGGATATTTCC +
Preference number: 4 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYSLVGY*RFMDIS
Trigger: GGAAATATCCATAAATCTGCAGTATCCAACCAAACT...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATACTCTGAGAAGGGATTaGGCACCACTTTGCCAATTC +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNTLRRD*APLCQF
Trigger: GAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATACTGGAGAAGTCACCTaGCCAGTGGTTGTCAACTTA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNTGEVT*PVVVNL
Trigger: TAAGTTGACAACCACTGGCCAGGTGACTTCTCCAGT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGCCGTGCCATATCATCTaGGTTGCAGTTAAAAATGCG +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLPCHII*VAVKNA
Trigger: CGCATTTTTAACTGCAACCCAGATGATATGGCACGG...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAGAACATGATCCGGTTTaGAATTTCAACCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLEHDPV*NFNHVV
Trigger: GACAACATGGTTGAAATTCCAAACCGGATCATGTTC...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATTGTCTGTGGCTAGTTTaGTTGGATACTGCAGATTTA +
Preference number: 4 (lower is better)
Translates to: REKTTENAAPGRTRLCVHCLWLV*LDTADL
Trigger: TAAATCTGCAGTATCCAACCAAACTAGCCACAGACA...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
3UTR CAA 72 bp CCTCAGGTAGCACAGGAGCTGTTCTTTGTAAGCAGGTaGTATGGATCTGTTCTCAGGTGTGGATTTTTATTT +
Preference number: 4 (lower is better)
Translates to: PQVAQELFFVSR*YGSVLRCGFLF
Trigger: AAATAAAAATCCACACCTGAGAACAGATCCATACAACCTGCTTACAAAGAACAGCTCCTGTGCTACCTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATAAGCAGATCTGTTTCTaGCCACTGGCTGAATTGTCT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNKQICF*PLAELS
Trigger: AGACAATTCAGCCAGTGGTCAGAAACAGATCTGCTT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTGTTGTTGGGCTTGGCTaGAAAGCCAGAAAATTTCCG +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIVVGLG*KARKFP
Trigger: CGGAAATTTTCTGGCTTTTCAGCCAAGCCCAACAAC...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGAGTCCAAAGCTTTTGTaGCTCGCTTCATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLSPKLL*LASFLR
Trigger: TCTCAGAAATGAAGCGAGTCACAAAAGCTTTGGACT...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATGATAGTAGATCTTGTTaGCCTTCAACCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNDSRSC*PSTSWV
Trigger: TACCCAGCTGGTTGAAGGTCAACAAGATCTACTATC...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTCAAAGCGTGTCAGGCTaGATACAAGTTCCGCTAAAC +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIQSVSG*IQVPLN
Trigger: GTTTAGCGGAACTTGTATTCAGCCTGACACGCTTTG...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTAAACTTAGCTGCGAGTaGTGGTGTGTGCCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIKLSCE*WCVPVC
Trigger: ACAAACAGGCACACACCATCACTCGCAGCTAAGTTT...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGACATTTCTTCATTaGATACTCAACGGACTTGCA +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLGTFLH*ILNGLA
Trigger: TGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCC...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATCAAAGGGCAGTGGTTTaGCTGTCTTGTTGTCAATCA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNQRAVV*LSCCQS
Trigger: TGATTGACAACAAGACAGGCAAACCACTGCCCTTTG...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGCATGTTGCCATCTTTaGTGTTGGAGTTACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFACCHL*CWSYSA
Trigger: AGCTGAGTAACTCCAACAGCAAAGATGGCAACATGC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTGCAGTCTGCATGTTaGCATCTTTGCTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNLQSAC*HLCCWS
Trigger: ACTCCAACAGCAAAGATGGCAACATGCAGACTGCAA...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAACCTGACAGTGGTTCATaGTATAATTTCCACACTTTA +
Preference number: 4 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEPDSGS*YNFHTL
Trigger: TAAAGTGTGGAAATTATAGCATGAACCACTGTCAGG...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTGCACGGAGGGTTTGTaGAAAGAAGATCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFCTEGL*KEDLES
Trigger: GCTTTCAAGATCTTCTTTCCACAAACCCTCCGTGCA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATAGAAAACAAGGTAGGTaGCACGTGATCTTAGATGGC +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNRKQGR*HVILDG
Trigger: GCCATCTAAGATCACGTGCCACCTACCTTGTTTTCT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGAGATCTGCAATGTGCTaGGTTATCTGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLRSAMC*VICSFS
Trigger: TGAGAAGGAACAGATAACCCAGCACATTGCAGATCT...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGCAGAGTTGTTGGGCTTaGCTGAAAAGCCAGAAAATT +
Preference number: 4 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLQSCWA*LKSQKI
Trigger: AATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTG...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTAGTCTTAATGACTCCTaGCAGCAGCAGCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSISLNDS*QQQLHC
Trigger: ACAGTGAAGCTGCTGCTGCCAGGAGTCATTAAGACT...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATCAGACATTAGCATCCTaGAAGGCTGCTTTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNQTLAS*KAAFLC
Trigger: ACACAAGAAAGCAGCCTTCCAGGATGCTAATGTCTG...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTACAGTTCCTTGAGTTaGGGAAGGTTAGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNYSSLS*GRLVAD
Trigger: ATCTGCCACTAACCTTCCCCAACTCAAGGAACTGTA...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTCTCCTTGGACAACTaGTACAGTTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNFSLDN*YSSLSW
Trigger: CCAACTCAAGGAACTGTACCAGTTGTCCAAGGAGAA...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTGCCATCTTTGCTGTTaGAGTTACTCAGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFCHLCC*SYSASL
Trigger: AAGGGAAGCTGAGTAACTCCAACAGCAAAGATGGCA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTCTTGTTTCCAGGTTTTaGGGATGCAGATCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSILVSRF*GCRSSW
Trigger: CCAGGAAGATCTGCATCCCCAAAACCTGGAAACAAG...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CCA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTAGACAGATAGCTGACTaGTTCATAATACATTGGAAT +
Preference number: 4 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCRQIAD*FIIHWN
Trigger: ATTCCAATGTATTATGAACCAGTCAGCTATCTGTCT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTCACATGTTTTGCACCTaGGTTCATCTTCAGATCATG +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFHMFCT*VHLQIM
Trigger: CATGATCTGAAGATGAACTCAGGTGCAAAACATGTG...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTGATAGTAGATCTTGTTaGCCTTCAACCAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSIDSRSC*PSTSWV
Trigger: TACCCAGCTGGTTGAAGGTCAACAAGATCTACTATC...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR GCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATGGGAAAGACTTGCTCTaGTCAAAGAAGACTCTGATT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNGKDLL*SKKTLI
Trigger: AATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCC...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATCTTAGATGGCTTCCCTaGAATGATAGAACAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNLRWLP*NDRTGF
Trigger: AAAGCCTGTTCTATCATTCCAGGGAAGCCATCTAAG...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATAACAGCTTTCTTCTTTaGTGTACCTGCTGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNNSFLL*CTCCLR
Trigger: TCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTAGCAATACCTTTGTTTaGCACAGCGTCTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSISNTFV*HSVSSA
Trigger: TGCTGATGAGACGCTGTGCCAAACAAAGGTATTGCT...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR TCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGTGGAAAGAAGATCTTaGAAGCCAAAGACATATAGC +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFVERRS*KPKTYS
Trigger: GCTATATGTCTTTGGCTTTCAAGATCTTCTTTCCAC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTCTGTTTCTGACCACTaGCTGAATTGTCTTACATCA +
Preference number: 4 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNSVSDH*LNCLTS
Trigger: TGATGTAAGACAATTCAGCCAGTGGTCAGAAACAGA...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGAACATGATCCGGTTTaGAATTTCAACCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFEHDPV*NFNHVV
Trigger: GACAACATGGTTGAAATTCCAAACCGGATCATGTTC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR TCA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTCATTTCTGAGAACATaGTCCGGTTTGGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFSFLRT*SGLEFQ
Trigger: TTGAAATTCCAAACCGGATCATGTTCTCAGAAATGA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR GCA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTAGCAAGGCTGAATGGTaGCTATTCAAAAACACCAAA +
Preference number: 4 (lower is better)
Translates to: FKENKKMANPAPSSERSISKAEW*LFKNTK
Trigger: TTTGGTGTTTTTGAATAGGCACCATTCAGCCTTGCT...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS CCA 90 bp TCTCGAAGGGCTTCCCGCGCCGCTGTCGGAGAGTGGCGGGGACAGTaGGGTCGGCGGCGTAGGCCGCGACCCCCGGCGAGGCAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SRRASRAAVGEWRGQ*GRRRRPRPPARQKG
Trigger: TCCTTTCTGCCTCGCCGGGGGTCGCGGCCTACGCCGCCGACCCCACTGTCCCCGCCACTCTCCGACAGCGGCGCGGGAAGCCCTTCGAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS TCA 90 bp CCTCCACCGGGTCCGGGACGCAGGCGGGAAGTGATCAAGGCTCCCTaGGTCCCACCCGAGCGCTCCCGGTTCAGCGCAGGAGGACGCACG +
Preference number: 5 (lower is better)
Translates to: PPPGPGRRREVIKAP*VPPERSRFSAGGRT
Trigger: CGTGCGTCCTCCTGCGCTGAACCGGGAGCGCTCGGGTGGGACTCAGGGAGCCTTGATCACTTCCCGCCTGCGTCCCGGACCCGGTGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS CCA 90 bp ACAACTGCCGCAGCCCAGGGGCCCGAGAAGGAAATCGCTGAGGCCTaGCCGCCGCCGCTTTTCTCGAAGGGCTTCCCGCGCCGCTGTCGG +
Preference number: 5 (lower is better)
Translates to: TTAAAQGPEKEIAEA*PPPLFSKGFPRRCR
Trigger: CCGACAGCGGCGCGGGAAGCCCTTCGAGAAAAGCGGCGGCGGCCAGGCCTCAGCGATTTCCTTCTCGGGCCCCTGGGCTGCGGCAGTTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS TCA 90 bp CAGAAAGGAGCGCTCCTCCACCGGGTCCGGGACGCAGGCGGGAAGTaGTCAAGGCTCCCTGAGTCCCACCCGAGCGCTCCCGGTTCAGCG +
Preference number: 5 (lower is better)
Translates to: QKGALLHRVRDAGGK*SRLPESHPSAPGSA
Trigger: CGCTGAACCGGGAGCGCTCGGGTGGGACTCAGGGAGCCTTGATCACTTCCCGCCTGCGTCCCGGACCCGGTGGAGGAGCGCTCCTTTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS TCA 90 bp TCTCCTCACAACTGCCGCAGCCCAGGGGCCCGAGAAGGAAATCGCTaGGGCCTGGCCGCCGCCGCTTTTCTCGAAGGGCTTCCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: SPHNCRSPGAREGNR*GLAAAAFLEGLPAP
Trigger: CGGCGCGGGAAGCCCTTCGAGAAAAGCGGCGGCGGCCAGGCCTCAGCGATTTCCTTCTCGGGCCCCTGGGCTGCGGCAGTTGTGAGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS GCA 90 bp ATAGCTGCCTCTCCGGCTCCGGCGCTCACCGTAGGCCTCGGAACTTaGTCATTACAGGCCGCGGGCAGCCCACGACGGTTGGAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: IAASPAPALTVGLGT*SLQAAGSPRRLERL
Trigger: CAGGCGCTCCAACCGTCGTGGGCTGCCCGCGGCCTGTAATGAGCAAGTTCCGAGGCCTACGGTGAGCGCCGGAGCCGGAGAGGCAGCTAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS CCA 90 bp CAGGCCTCCGCCAACATGGGCTGCACAGGTGTCATCAGCGAGGCCTaGACGCTCAGAGCTCGTCTCTGGCCCGGCTCCTTCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: QASANMGCTGVISEA*TLRARLWPGSFSTS
Trigger: GGAGGTGGAGAAGGAGCCGGGCCAGAGACGAGCTCTGAGCGTCCAGGCCTCGCTGATGACACCTGTGCAGCCCATGTTGGCGGAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590630.5
CDS TCA 90 bp AGAGCTCGTCTCTGGCCCGGCTCCTTCTCCACCTCCTGCGCGTTGTaGAGGACCCGCTCCACCACATCCTGCAGGTTGCGCGAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RARLWPGSFSTSCAL*RTRSTTSCRLREAL
Trigger: CAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGCGGGTCCTTCACAACGCGCAGGAGGTGGAGAAGGAGCCGGGCCAGAGACGAGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590630.5
CDS GCA 90 bp GAGTCCCTGCAGTCTCTCCTGGCTAGGCCGGGCTGTTCTATCTCCTaGCTGCTGGCACAGTTCTTCCTCTCTGCTCACTGGCTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: ESLQSLLARPGCSIS*LLAQFFLSAHWLAA
Trigger: GGCGGCCAGCCAGTGAGCAGAGAGGAAGAACTGTGCCAGCAGGCAGGAGATAGAACAGCCCGGCCTAGCCAGGAGAGACTGCAGGGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000592244.1
ENST00000593099.5
CDS GCA 90 bp CCCTGCAGTCTCTCCTGGCTAGGCCGGGCTGTTCTATCTCCTGCCTaGTGGCACAGTTCTTCCTCTCTGCTCACTGGCTGGCCGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PCSLSWLGRAVLSPA*WHSSSSLLTGWPPL
Trigger: CAGAGGCGGCCAGCCAGTGAGCAGAGAGGAAGAACTGTGCCAGCAGGCAGGAGATAGAACAGCCCGGCCTAGCCAGGAGAGACTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592244.1
ENST00000593099.5
CDS TCA 90 bp GCTCACTGGCTGGCCGCCTCTGCAAGGCAACAAGAGGACATAGGGTaGGCAGCAGCATTGCTGACCCTGCCCACGACAGAGGAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: AHWLAASARQQEDIG*AAALLTLPTTEEWL
Trigger: CAGCCACTCCTCTGTCGTGGGCAGGGTCAGCAATGCTGCTGCTCACCCTATGTCCTCTTGTTGCCTTGCAGAGGCGGCCAGCCAGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592244.1
ENST00000593099.5
CDS GCA 90 bp CCCTGCAGTCTCTCCTGGCTAGGCCGGGCTGTTCTATCTCCTGCCTaGTGGCACAGTTCTTCCTCTCTGCTCACTGGCTGGCCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: PCSLSWLGRAVLSPA*WHSSSSLLTGWPPL
Trigger: AAGAGGCGGCCAGCCAGTGAGCAGAGAGGAAGAACTGTGCCAGCAGGCAGGAGATAGAACAGCCCGGCCTAGCCAGGAGAGACTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS GCA 90 bp AACAGGGAAAAGGCTCCTCAGGTGGGAGGAGAGTCACCAAGCCAGTaGCCTCTCCCCGACTCGCTGCTTGCTGGACCTGCTTCCACCCTG +
Preference number: 5 (lower is better)
Translates to: NREKAPQVGGESPSQ*PLPDSLLAGPASTL
Trigger: CAGGGTGGAAGCAGGTCCAGCAAGCAGCGAGTCGGGGAGAGGGCACTGGCTTGGTGACTCTCCTCCCACCTGAGGAGCCTTTTCCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp CTCCGTTTCCGGATACATGCCCAAATCCACTCTGGGGAGACCTGCTaGGCCGCAGGGTTCTTGTCCCTGCTACCCAGCACGTGCGTGGCT +
Preference number: 5 (lower is better)
Translates to: LRFRIHAQIHSGETC*AAGFLSLLPSTCVA
Trigger: AGCCACGCACGTGCTGGGTAGCAGGGACAAGAACCCTGCGGCCCAGCAGGTCTCCCCAGAGTGGATTTGGGCATGTATCCGGAAACGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS TCA 90 bp CAAGGAATCCATGAATGCGCTGGTTGTGGGGGAGGGAGGCTGTTCTaGGCTCTCCTCACAACTGCCGCAGCCCAGGGGCCCGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: QGIHECAGCGGGRLF*ALLTTAAAQGPEKE
Trigger: TTCCTTCTCGGGCCCCTGGGCTGCGGCAGTTGTGAGGAGAGCTCAGAACAGCCTCCCTCCCCCACAACCAGCGCATTCATGGATTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS GCA 90 bp AGTCTCCGTTTCCGGATACATGCCCAAATCCACTCTGGGGAGACCTaGTGGGCCGCAGGGTTCTTGTCCCTGCTACCCAGCACGTGCGTG +
Preference number: 5 (lower is better)
Translates to: SLRFRIHAQIHSGET*WAAGFLSLLPSTCV
Trigger: CACGCACGTGCTGGGTAGCAGGGACAAGAACCCTGCGGCCCAGCAGGTCTCCCCAGAGTGGATTTGGGCATGTATCCGGAAACGGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS-3UTR CAA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCGGCTTGCTGGGGGCCTaGCGGGACACAGCAGACCCT +
Preference number: 5 (lower is better)
Translates to: GFGRSKPIPPILCLSASSGLLGA*RDTADP
Trigger: AGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCC...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS GCA 90 bp GCCGGGCTGTTCTATCTCCTGCCTGCTGGCACAGTTCTTCCTCTCTaGTCACTGGCTGGCCGCCTCTGCAAGGCAACAAGAGGACATAGG +
Preference number: 5 (lower is better)
Translates to: AGLFYLLPAGTVLPL*SLAGRLCKATRGHR
Trigger: CCTATGTCCTCTTGTTGCCTTGCAGAGGCGGCCAGCCAGTGAGCAGAGAGGAAGAACTGTGCCAGCAGGCAGGAGATAGAACAGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592244.1
ENST00000593099.5
CDS GCA 90 bp GTCACCAAGCCAGTGCCCTCTCCCCGACTCGCTGCTTGCTGGACCTaGTTCCACCCTGACCACAAACTCAATGCTGCATTCCCACACCCA +
Preference number: 5 (lower is better)
Translates to: VTKPVPSPRLAACWT*FHPDHKLNAAFPHP
Trigger: TGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAGGGTGGAAGCAGGTCCAGCAAGCAGCGAGTCGGGGAGAGGGCACTGGCTTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS-3UTR CAA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGACCACATCCTGCAGGTaGCGCGAGGCTTTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLTTSCR*REALKA
Trigger: AGCCTTCAAAGCCTCGCGCAACCTGCAGGATGTGGT...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp CTGGGCCGCAGGGTTCTTGTCCCTGCTACCCAGCACGTGCGTGGCTaGAGTCATATCAAATTCCTGTACCAGGTCCCCGTCGAATGCCAC +
Preference number: 5 (lower is better)
Translates to: LGRRVLVPATQHVRG*SHIKFLYQVPVECH
Trigger: GTGGCATTCGACGGGGACCTGGTACAGGAATTTGATATGACTTCAGCCACGCACGTGCTGGGTAGCAGGGACAAGAACCCTGCGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS GCA 90 bp CCTGCTGGCACAGTTCTTCCTCTCTGCTCACTGGCTGGCCGCCTCTaGAAGGCAACAAGAGGACATAGGGTGAGCAGCAGCATTGCTGAC +
Preference number: 5 (lower is better)
Translates to: PAGTVLPLCSLAGRL*KATRGHRVSSSIAD
Trigger: GTCAGCAATGCTGCTGCTCACCCTATGTCCTCTTGTTGCCTTGCAGAGGCGGCCAGCCAGTGAGCAGAGAGGAAGAACTGTGCCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592244.1
ENST00000593099.5
CDS-3UTR CAA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCACGTAGGCCTCGGAACTaGCTCATTACAGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: KGQDDHLQPAEALSCECARRPRN*LITGRG
Trigger: CCCGCGGCCTGTAATGAGCAAGTTCCGAGGCCTACG...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp AGTGCCCTCTCCCCGACTCGCTGCTTGCTGGACCTGCTTCCACCCTaGCCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SALSPTRCLLDLLPP*PQTQCCIPTPRLVF
Trigger: AAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAGGGTGGAAGCAGGTCCAGCAAGCAGCGAGTCGGGGAGAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 90 bp AGGTTTCTACAGGTCTGTTGGGGACCGAGTTCAGGCCTTGTGCTGTaGGACTTCTATGCTTACTCCTGGATGGCGGTGGGGAGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: RFLQVCWGPSSGLVL*DFYAYSWMAVGSVG
Trigger: CCCCACGCTCCCCACCGCCATCCAGGAGTAAGCATAGAAGTCTCACAGCACAAGGCCTGAACTCGGTCCCCAACAGACCTGTAGAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 90 bp AGTTACTCAGCTTCCCTTCTGCTTTCTTGGTACTGGCTGAGGGCTTaGTGGGGGCCTTGCGGGACACAGCAGACCCTGAGGGACCCTTAT +
Preference number: 5 (lower is better)
Translates to: SYSASLLLSWYWLRA*WGPCGTQQTLRDPY
Trigger: ATAAGGGTCCCTCAGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGAAGCTGAGTAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS GCA 90 bp ACAGCAAACCTAGCAGGGAGCTACCAGTCTCCGTTTCCGGATACATaGCCAAATCCACTCTGGGGAGACCTGCTGGGCCGCAGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: TANLAGSYQSPFPDT*PNPLWGDLLGRRVL
Trigger: AAGAACCCTGCGGCCCAGCAGGTCTCCCCAGAGTGGATTTGGGCATGTATCCGGAAACGGAGACTGGTAGCTCCCTGCTAGGTTTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS CCA 90 bp TACTCAGCTTCCCTTCTGCTTTCTTGGTACTGGCTGAGGGCTTGCTaGGGGCCTTGCGGGACACAGCAGACCCTGAGGGACCCTTATTCT +
Preference number: 5 (lower is better)
Translates to: YSASLLLSWYWLRAC*GPCGTQQTLRDPYS
Trigger: AGAATAAGGGTCCCTCAGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGAAGCTGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS CCA 90 bp GTCCCCGTCGAATGCCACAAAGTAGCGTCTGAGACGGCTGAAGTCTaGTGTGGAGGGTGGCAAGTAAAGCCGCACCCCAGTGAAGATGTC +
Preference number: 5 (lower is better)
Translates to: VPVECHKVASETAEV*CGGWQVKPHPSEDV
Trigger: GACATCTTCACTGGGGTGCGGCTTTACTTGCCACCCTCCACACCAGACTTCAGCCGTCTCAGACGCTACTTTGTGGCATTCGACGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378526.9
ENST00000592244.1
ENST00000593099.5
CDS-3UTR CAA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCTGCTGCTCATCCTCCTaGGTGAGCTTGGACAGCCGC +
Preference number: 5 (lower is better)
Translates to: GFGRSKPIPPILCLSASSCCSSS*VSLDSR
Trigger: GCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCA...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCATGGCTCAGAAAAGGTaGGCCCAGGCTGGGCGCCAT +
Preference number: 5 (lower is better)
Translates to: GFGRSKPIPPILCLSASSMAQKR*AQAGRH
Trigger: ATGGCGCCCAGCCTGGGCCAACCTTTTCTGAGCCAT...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp TGGAGGCAATGTCCTGTAGGGCCTGTTGCTGCTCATCCTCCTTGGTaGGCTTGGACAGCCGCAGAAGGAACTCATCCACTTCCTGGATGG +
Preference number: 5 (lower is better)
Translates to: WRQCPVGPVAAHPPW*AWTAAEGTHPLPGW
Trigger: CCATCCAGGAAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS TCA 90 bp ATTCGGGTGCAGCGAGGGAATCGGATGGAGATCCCGTCAGCTGTATaGGCCTCCGATTTGGAGAATTCAGCCCCTGTGATCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: IRVQRGNRMEIPSAV*ASDLENSAPVISHT
Trigger: CGTGTGGGAGATCACAGGGGCTGAATTCTCCAAATCGGAGGCTCATACAGCTGACGGGATCTCCATCCGATTCCCTCGCTGCACCCGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS GCA 90 bp AGGTCATTGGCTGTACACCTGGAGGCAATGTCCTGTAGGGCCTGTTaGTGCTCATCCTCCTTGGTGAGCTTGGACAGCCGCAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: RSLAVHLEAMSCRAC*CSSSLVSLDSRRRN
Trigger: GTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGCCTCCAGGTGTACAGCCAATGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS GCA 90 bp GGGAAAGGTTTCTACAGGTCTGTTGGGGACCGAGTTCAGGCCTTGTaGTGTGAGACTTCTATGCTTACTCCTGGATGGCGGTGGGGAGCG +
Preference number: 5 (lower is better)
Translates to: GKGFYRSVGDRVQAL*CETSMLTPGWRWGA
Trigger: CGCTCCCCACCGCCATCCAGGAGTAAGCATAGAAGTCTCACAGCACAAGGCCTGAACTCGGTCCCCAACAGACCTGTAGAAACCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp ACCATGTCTAGTTCATTCTGCAGGCGGGCAAGCGTGGCATCATCATaGCCTCCTGCACACTTGGTGACTGTGCACCACTTCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: TMSSSFCRRASVASS*PPAHLVTVHHFWLP
Trigger: TGGCAGCCAGAAGTGGTGCACAGTCACCAAGTGTGCAGGAGGCCATGATGATGCCACGCTTGCCCGCCTGCAGAATGAACTAGACATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586119.1
ENST00000593099.5
CDS CCA 90 bp CGAGTTCAGGCCTTGTGCTGTGAGACTTCTATGCTTACTCCTGGATaGCGGTGGGGAGCGTGGGGGCGCAATGACATGGGTGTCAATCAT +
Preference number: 5 (lower is better)
Translates to: RVQALCCETSMLTPG*RWGAWGRNDMGVNH
Trigger: ATGATTGACACCCATGTCATTGCGCCCCCACGCTCCCCACCGCCATCCAGGAGTAAGCATAGAAGTCTCACAGCACAAGGCCTGAACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS-3UTR CAA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCATCCTCCTTGGTGAGCTaGGACAGCCGCAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: KGQDDHLQPAEALSCECASSLVS*DSRRRN
Trigger: GTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGA...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGGGATTAGCCTGTGGTaGGGCCAAGTGACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKGISLW*GQVTLV
Trigger: GACCAAGGTCACTTGGCCCAACCACAGGCTAATCCC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp TGTGAAGGACCCGCTCCACCACATCCTGCAGGTTGCGCGAGGCTTTaGAGGCTTCATAGGCATTGGGGTCAAGGGCGTCTAACACATGTT +
Preference number: 5 (lower is better)
Translates to: CEGPAPPHPAGCARL*RLHRHWGQGRLTHV
Trigger: AACATGTGTTAGACGCCCTTGACCCCAATGCCTATGAAGCCTTCAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGCGGGTCCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS GCA 90 bp TCATTGGCTGTACACCTGGAGGCAATGTCCTGTAGGGCCTGTTGCTaGTCATCCTCCTTGGTGAGCTTGGACAGCCGCAGAAGGAACTCA +
Preference number: 5 (lower is better)
Translates to: SLAVHLEAMSCRACC*SSSLVSLDSRRRNS
Trigger: TGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGCCTCCAGGTGTACAGCCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS CCA 90 bp GGGGAAAAGGAGAGTGGACAGGCCTCGACATCTGGGACCTGGAGATaGGAAGAGTACATGTGTATAAGAGCCACCCAGTCATGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: GEKESGQASTSGTWR*EEYMCIRATQSWWA
Trigger: TGCCCACCATGACTGGGTGGCTCTTATACACATGTACTCTTCCCATCTCCAGGTCCCAGATGTCGAGGCCTGTCCACTCTCCTTTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp CCATCCCTGCCTAGGGGAAAAGGAGAGTGGACAGGCCTCGACATCTaGGACCTGGAGATGGGAAGAGTACATGTGTATAAGAGCCACCCA +
Preference number: 5 (lower is better)
Translates to: PSLPRGKGEWTGLDI*DLEMGRVHVYKSHP
Trigger: TGGGTGGCTCTTATACACATGTACTCTTCCCATCTCCAGGTCCCAGATGTCGAGGCCTGTCCACTCTCCTTTTCCCCTAGGCAGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp TGCCACAAAGTAGCGTCTGAGACGGCTGAAGTCTGGTGTGGAGGGTaGCAAGTAAAGCCGCACCCCAGTGAAGATGTCCAGCAATACCTG +
Preference number: 5 (lower is better)
Translates to: CHKVASETAEVWCGG*QVKPHPSEDVQQYL
Trigger: CAGGTATTGCTGGACATCTTCACTGGGGTGCGGCTTTACTTGCCACCCTCCACACCAGACTTCAGCCGTCTCAGACGCTACTTTGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp TGCCACAAAGTAGCGTCTGAGACGGCTGAAGTCTGGTGTGGAGGGTaGCAAGTAAAGCCGCACCCCAGTGAAGATGTCCAGCAATACCCT +
Preference number: 5 (lower is better)
Translates to: CHKVASETAEVWCGG*QVKPHPSEDVQQYP
Trigger: AGGGTATTGCTGGACATCTTCACTGGGGTGCGGCTTTACTTGCCACCCTCCACACCAGACTTCAGCCGTCTCAGACGCTACTTTGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592244.1
CDS-3UTR CAA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATGTACTGGCTGAGGGCTaGCTGGGGGCCTTGCGGGAC +
Preference number: 5 (lower is better)
Translates to: REKTTENAAPGRTRLCVHVLAEG*LGALRD
Trigger: GTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTAC...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AAGGGACAAGATGATCACCTGCAGCCAGCAGAGGCCCTTTCCTGTGAGTGTGCAAGTGATGACCTCTGCTaGATGCCAGCCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: KGQDDHLQPAEALSCECASDDLC*MPASSM
Trigger: CATGCTGCTGGCTGGCATCAAGCAGAGGTCATCACT...TGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTGTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp GGTGGGGTCAGACCTACACTGGGTACAGATGGGTCTTCACCCAAATaGGCACGGGACAGAATGAGGGAGCCTAGAGTTAGGACACAAGCA +
Preference number: 5 (lower is better)
Translates to: GGVRPTLGTDGSSPK*ARDRMREPRVRTQA
Trigger: TGCTTGTGTCCTAACTCTAGGCTCCCTCATTCTGTCCCGTGCTCATTTGGGTGAAGACCCATCTGTACCCAGTGTAGGTCTGACCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 90 bp TCCGGAGGAAAGGCCTATTCAGGATGCTCATGCCACACCTCCTGCTaGGCCTTTCCGAAGGAAGTCCTGGATGATCTGGGTCTTCGTGTT +
Preference number: 5 (lower is better)
Translates to: SGGKAYSGCSCHTSC*AFPKEVLDDLGLRV
Trigger: AACACGAAGACCCAGATCATCCAGGACTTCCTTCGGAAAGGCTCAGCAGGAGGTGTGGCATGAGCATCCTGAATAGGCCTTTCCTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590181.5
CDS GCA 90 bp CCCTGTAGTGGAGCTCCCCTCATCTCCAGCCACTACAGTGAAGTCTaGCTTCTCCTTGGACAACTGGTACAGTTCCTTGAGTTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: PCSGAPLISSHYSEV*LLLGQLVQFLELGK
Trigger: CTTCCCCAACTCAAGGAACTGTACCAGTTGTCCAAGGAGAAGGCAGACTTCACTGTAGTGGCTGGAGATGAGGGGAGCTCCACTACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS CCA 90 bp TGCCACAAAGTAGCGTCTGAGACGGCTGAAGTCTGGTGTGGAGGGTaGCAAGTAAAGCCGCACCCCAGTGAAGATGTCCAGCAATACCTT +
Preference number: 5 (lower is better)
Translates to: CHKVASETAEVWCGG*QVKPHPSEDVQQYL
Trigger: AAGGTATTGCTGGACATCTTCACTGGGGTGCGGCTTTACTTGCCACCCTCCACACCAGACTTCAGCCGTCTCAGACGCTACTTTGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS CCA 90 bp CAGGCCTTGTGCTGTGAGACTTCTATGCTTACTCCTGGATGGCGGTaGGGAGCGTGGGGGCGCAATGACATGGGTGTCAATCATATGTTT +
Preference number: 5 (lower is better)
Translates to: QALCCETSMLTPGWR*GAWGRNDMGVNHMF
Trigger: AAACATATGATTGACACCCATGTCATTGCGCCCCCACGCTCCCCACCGCCATCCAGGAGTAAGCATAGAAGTCTCACAGCACAAGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp TGCCTAGGGGAAAAGGAGAGTGGACAGGCCTCGACATCTGGGACCTaGAGATGGGAAGAGTACATGTGTATAAGAGCCACCCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: CLGEKESGQASTSGT*RWEEYMCIRATQSW
Trigger: CCATGACTGGGTGGCTCTTATACACATGTACTCTTCCCATCTCCAGGTCCCAGATGTCGAGGCCTGTCCACTCTCCTTTTCCCCTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp TTCTTCATTGCATACTCAACGGACTTGCAGGCCTCCGCCTTGGGGTaGGGAAAGCAAAGCCTGGAGACTTTCAATGAGGGGCTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: FFIAYSTDLQASALG*GKQSLETFNEGLLS
Trigger: GCTTAGCAGCCCCTCATTGAAAGTCTCCAGGCTTTGCTTTCCCCACCCCAAGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586058.1
CDS-3UTR CAA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTACGTAGGCCTCGGAACTaGCTCATTACAGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLRRPRN*LITGRG
Trigger: CCCGCGGCCTGTAATGAGCAAGTTCCGAGGCCTACG...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp GGCAGCAGCAGCTTCACTGTTAGGTACACATCACCGTGGAAACCATCTCCTGCTGCTTCCCCAGAGTTGTaGGGCTTGGCTGAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GSSSFTVRYTSPWKPSPAASPEL*GLAEKP
Trigger: TGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAGC...AGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCTGCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CAA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGCCGCCTTTGCTCCCTaGCCCATAGAAGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYAAFAP*PIEGSK
Trigger: CTTGGAGCCTTCTATGGGCAAGGGAGCAAAGGCGGC...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS GCA 90 bp ATTTTGCTGGGGTCCTTGCTGATCTTCACCATGTCTAGTTCATTCTaGAGGCGGGCAAGCGTGGCATCATCATGGCCTCCTGCACACTTG +
Preference number: 5 (lower is better)
Translates to: ILLGSLLIFTMSSSF*RRASVASSWPPAHL
Trigger: CAAGTGTGCAGGAGGCCATGATGATGCCACGCTTGCCCGCCTGCAGAATGAACTAGACATGGTGAAGATCAGCAAGGACCCCAGCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586119.1
ENST00000593099.5
CDS CCA 90 bp TCCAGTCCTTATCATCTCGGATTCGGGTGCAGCGAGGGAATCGGATaGAGATCCCGTCAGCTGTATGAGCCTCCGATTTGGAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: SSPYHLGFGCSEGIG*RSRQLYEPPIWRIQ
Trigger: CTGAATTCTCCAAATCGGAGGCTCATACAGCTGACGGGATCTCCATCCGATTCCCTCGCTGCACCCGAATCCGAGATGATAAGGACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS-3UTR CAA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGGACTCTGAGAAGGGATaGGGCACCACTTTGCCAATT +
Preference number: 5 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKDSEKG*GTTLPI
Trigger: AATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTC...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGTGCCTGGGGTCACATTaGCTTGAAGACAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKCLGSH*LEDRLL
Trigger: GAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCA...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTATGCTGCTCATCCTCCTaGGTGAGCTTGGACAGCCGC +
Preference number: 5 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLCCSSS*VSLDSR
Trigger: GCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCA...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCCAAAGGGCAGTGGTTaGCCTGTCTTGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKPKGSG*PVLLSI
Trigger: GATTGACAACAAGACAGGCAAACCACTGCCCTTTGG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAGCCGCCTTTGCTCCCTaGCCCATAGAAGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLAAFAP*PIEGSK
Trigger: CTTGGAGCCTTCTATGGGCAAGGGAGCAAAGGCGGC...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGCTTGCTGGGGGCCTaGCGGGACACAGCAGACCCT +
Preference number: 5 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLGLLGA*RDTADP
Trigger: AGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCC...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp ACAGCCTTGTTCTGCTGCCCTGTCCGGTTGTTTGTTTGGCCTGAGGCTGAAGAGCAGCAATACCTTTGTTaGGCACAGCGTCTCATCAGC +
Preference number: 5 (lower is better)
Translates to: TALFCCPVRLFVWPEAEEQQYLC*AQRLIS
Trigger: GCTGATGAGACGCTGTGCCAAACAAAGGTATTGCTG...CTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAACCTGAGGAGACAGCCTaGTTCTGCTGCCCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEPEETA*FCCPVR
Trigger: CCGGACAGGGCAGCAGAACAAGGCTGTCTCCTCAGG...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GCCCAGCCTCGTGACAGACTGCTGTGTGTGCGCAGGCTTGTACAAACCTCCCTGGATACATGGTACCTTTaGGATACAGCTGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: AQPRDRLLCVRRLVQTSLDTWYL*DTAVVQ
Trigger: CTGTACTACAGCTGTATCCAAAAGGTACCATGTATC...CAGGGAGGTTTGTACAAGCCTGCGCACACACAGCAGTCTGTCACGAGGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp GAAAGCAGGTTGCTTCTCATCCCAAACAGAGGGCTGCTGTGGCTTTaGAACACAGGAGGCTTACCTAGGAAGGATTTCCATGCCCTACCC +
Preference number: 5 (lower is better)
Translates to: ESRLLLIPNRGLLWL*NTGGLPRKDFHALP
Trigger: GGGTAGGGCATGGAAATCCTTCCTAGGTAAGCCTCCTGTGTTTCAAAGCCACAGCAGCCCTCTGTTTGGGATGAGAAGCAACCTGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 90 bp GCAGTCTACTCTGTACAACCTGCTAGACTGAGGGGTCAGGAGTCCTaGTTACTACTCTCAATGGGTTCAAGGACTTCAGGCTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: AVYSVQPARLRGQES*LLLSMGSRTSGWEE
Trigger: CTCTTCCCAGCCTGAAGTCCTTGAACCCATTGAGAGTAGTAAGCAGGACTCCTGACCCCTCAGTCTAGCAGGTTGTACAGAGTAGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 90 bp AGAACATGCCATTGGGACATTTCTTCATTGCATACTCAACGGACTTaGAGGCCTCCGCCTTGGGGTGGGGAAAGCAAAGCCTGGAGACTT +
Preference number: 5 (lower is better)
Translates to: RTCHWDISSLHTQRT*RPPPWGGESKAWRL
Trigger: AAGTCTCCAGGCTTTGCTTTCCCCACCCCAAGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCAATGGCATGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586058.1
CDS-3UTR CAA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCCAGAGTTGTTGGGCTaGGCTGAAAAGCCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKPELLG*AEKPEN
Trigger: ATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTGG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGCTTCCCCAGAGTTGTaGGGCTTGGCTGAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYASPEL*GLAEKP
Trigger: TGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAGC...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GTGACAAATGAGGCGCCTTTCACTGGAGAAGTCACCTGGCCAGTGGTTGTCAACTGCCTGGGGTCACATTaGCTTGAAGACAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: VTNEAPFTGEVTWPVVVNCLGSH*LEDRLL
Trigger: GAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCA...GTTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CAA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAACCACATCCTGCAGGTaGCGCGAGGCTTTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLTTSCR*REALKA
Trigger: AGCCTTCAAAGCCTCGCGCAACCTGCAGGATGTGGT...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGTACTGGCTGAGGGCTaGCTGGGGGCCTTGCGGGAC +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFVLAEG*LGALRD
Trigger: GTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTAC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTATGGCCGCCTCTTTGTTaGGCACAGCGTCTCATCAGC +
Preference number: 5 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLWPPLC*AQRLIS
Trigger: GCTGATGAGACGCTGTGCCAAACAAAGAGGCGGCCA...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGCCCTGTCCGGTTGTTaGTTTGGCCTGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLALSGC*FGLRLK
Trigger: CTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGC...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp ATGTCCCCTGAGACCAAGCAGTCTACTCTGTACAACCTGCTAGACTaGGGGGTCAGGAGTCCTGCTTACTACTCTCAATGGGTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: MSPETKQSTLYNLLD*GVRSPAYYSQWVQG
Trigger: TCCTTGAACCCATTGAGAGTAGTAAGCAGGACTCCTGACCCCTCAGTCTAGCAGGTTGTACAGAGTAGACTGCTTGGTCTCAGGGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 90 bp GAAGACAGATCTCACAGGGTAGTTGGGAAAATTACAAGGAATCCATaGATGCGCTGGTTGTGGGGGAGGGAGGCTGTTCTGAGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: EDRSHRVVGKITRNP*MRWLWGREAVLSSP
Trigger: AGGAGAGCTCAGAACAGCCTCCCTCCCCCACAACCAGCGCATTCATGGATTCCTTGTAATTTTCCCAACTACCCTGTGAGATCTGTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS CCA 90 bp CACTGCAGAGTCCCACATGCAACCCTGGCAAGAAAACAAGGTAGGTaGCACGTGATCTTAGATGGCTTCCCTGGAATGATAGAACAGGCT +
Preference number: 5 (lower is better)
Translates to: HCRVPHATLARKQGR*HVILDGFPGMIEQA
Trigger: AGCCTGTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCACCTACCTTGTTTTCTTGCCAGGGTTGCATGTGGGACTCTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
CDS CCA 90 bp AAGGAACTCATCCACTTCCTGGATGGTAAGGAGGCTCTTGGCAGCTaGGGGGAAAGACTTGCTCTGCTCAAAGAAGACTCTGATTGTCTC +
Preference number: 5 (lower is better)
Translates to: KELIHFLDGKEALGS*GERLALLKEDSDCL
Trigger: GAGACAATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCCCCCAGCTGCCAAGAGCCTCCTTACCATCCAGGAAGTGGATGAGTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS CCA 90 bp TTGTACAGAAGGTTGGGAACACAACCTGGGCTAAACTGGCCCACGTaGTGTGTTGCTGTTTTTACCCTCACCTTTGTTTGGCACAGCGTC +
Preference number: 5 (lower is better)
Translates to: LYRRLGTQPGLNWPT*CVAVFTLTFVWHSV
Trigger: GACGCTGTGCCAAACAAAGGTGAGGGTAAAAACAGCAACACACCACGTGGGCCAGTTTAGCCCAGGTTGTGTTCCCAACCTTCTGTACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp TGCTGTGAGACTTCTATGCTTACTCCTGGATGGCGGTGGGGAGCGTaGGGGCGCAATGACATGGGTGTCAATCATATGTTTACTTCTCTA +
Preference number: 5 (lower is better)
Translates to: CCETSMLTPGWRWGA*GRNDMGVNHMFTSL
Trigger: TAGAGAAGTAAACATATGATTGACACCCATGTCATTGCGCCCCCACGCTCCCCACCGCCATCCAGGAGTAAGCATAGAAGTCTCACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS-3UTR CAA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAGCATACTCAACGGACTaGCAGGCCTCCGCCAACATG +
Preference number: 5 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEAYSTD*QASANM
Trigger: CATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGC...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCGGTTTGCCTGTCTTGTaGTCAATCAGAAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: GFGRSKPIPPILCLSASSGLPVL*SIRSTS
Trigger: TGAAGTGCTTCTGATTGACAACAAGACAGGCAAACC...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATTGGCCTCCTGCACACTaGGTGACTGTGCACCACTTC +
Preference number: 5 (lower is better)
Translates to: REKTTENAAPGRTRLCVHWPPAH*VTVHHF
Trigger: GAAGTGGTGCACAGTCACCAAGTGTGCAGGAGGCCA...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTTCACTGGAGAAGACTTaGTGGCCAGCTTCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCSLEKT*WPASPP
Trigger: TGGGGGAGAAGCTGGCCACAAAGTCTTCTCCAGTGA...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCATGGTGTGTGCCTGTTaGTTAAGTCTTAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: GFGRSKPIPPILCLSASSMVCAC*LSLSHL
Trigger: CAAGTGGCTAAGACTTAACAAACAGGCACACACCAT...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS GCA 90 bp ATCGTACTTGATCTCAGAGAACATGCCATTGGGACATTTCTTCATTaGATACTCAACGGACTTGCAGGCCTCCGCCAACATGGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: IVLDLREHAIGTFLH*ILNGLAGLRQHGLH
Trigger: GTGCAGCCCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCAATGGCATGTTCTCTGAGATCAAGTACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590630.5
CDS GCA 90 bp ATCGTACTTGATCTCAGAGAACATGCCATTGGGACATTTCTTCATTaGATACTCAACGGACTTGCAGGCCTCCGCCTTGGGGTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: IVLDLREHAIGTFLH*ILNGLAGLRLGVGK
Trigger: TTTCCCCACCCCAAGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCAATGGCATGTTCTCTGAGATCAAGTACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586058.1
CDS CCA 90 bp CTGGCCAGTGGTTGTCAACTTAGCCTGGACAACAGCTTTCTTCTTTaGTGTACCTGCTGCCTTAGAAGACAGATCTGCAATGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: LASGCQLSLDNSFLL*CTCCLRRQICNVLG
Trigger: ACCCAGCACATTGCAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTTGTCCAGGCTAAGTTGACAACCACTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS CCA 90 bp CTGGCCAGTGGTTGTCAACTTAGCCTGGACAACAGCTTTCTTCTTTaGTGTACCTGCTGCCTTAGAAGACAGATCTCACAGGGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: LASGCQLSLDNSFLL*CTCCLRRQISQGSW
Trigger: CCAACTACCCTGTGAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTTGTCCAGGCTAAGTTGACAACCACTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS-3UTR CAA 90 bp GCCACCATGGCGCATAACTTTCGAAACTCCCGTAGCAGACAGTCCTTATGCCTGGAAAATTTCCGGGGATaGGTACTGGTGACAAATGAG +
Preference number: 5 (lower is better)
Translates to: ATMAHNFRNSRSRQSLCLENFRG*VLVTNE
Trigger: CTCATTTGTCACCAGTACCAATCCCCGGAAATTTTC...CAGGCATAAGGACTGTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588109.5
CDS-3UTR CAA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATCGCTCTCCATCGTACTaGATCTCAGAGAACATGCCA +
Preference number: 5 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYRSPSY*ISENMP
Trigger: TGGCATGTTCTCTGAGATCAAGTACGATGGAGAGCG...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGTGGAAGGCTGCTTTCTaGTGTACTCCCAGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: KREASSILLERFMMMMLRWKAAF*CTPRVP
Trigger: TGGGACTCTGGGAGTACACAAGAAAGCAGCCTTCCA...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGTTCCCTTCTGCTTTCTaGGTACTGGCTGAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: KREASSILLERFMMMMLRFPSAF*VLAEGL
Trigger: CAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGAA...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGTGGCTGGCCGCCTCTTaGTTTGGCACAGCGTCTCAT +
Preference number: 5 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGWLAAS*FGTASH
Trigger: ATGAGACGCTGTGCCAAACAAAGAGGCGGCCAGCCA...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTTGGGCCGCAGGGTTCTaGTCCCTGCTACCCAGCACG +
Preference number: 5 (lower is better)
Translates to: FKENKKMANPAPSSERSIWAAGF*SLLPST
Trigger: CGTGCTGGGTAGCAGGGACAAGAACCCTGCGGCCCA...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCGTGCTTTACATAATGTaGCTCAGGACAACAGGACAA +
Preference number: 5 (lower is better)
Translates to: GFGRSKPIPPILCLSASSVLYIM*LRTTGQ
Trigger: TTGTCCTGTTGTCCTGAGCAACATTATGTAAAGCAC...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGACTCAGAGTGGAGTGTaGGCTGGAACATGCACACCT +
Preference number: 5 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLTQSGV*AGTCTP
Trigger: AGGTGTGCATGTTCCAGCCAACACTCCACTCTGAGT...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GGGTTTGGGAGAAGCAAGCCCATTCCCCCTATACTGTGTCTATCTGCCTCCAGCGAAGAGAAAGGAATCTaGCCAAAAGGGCATAAAGGA +
Preference number: 5 (lower is better)
Translates to: GFGRSKPIPPILCLSASSEEKGI*PKGHKG
Trigger: TCCTTTATGCCCTTTTGGCAAGATTCCTTTCTCTTC...GCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp CATGCATTTAATGTGGTACCACTCTTTCATATCACCCCCAGACTCTaGGAAGGGATTGGGCACCACTTTGCCAATTCGGCATACGCCCTT +
Preference number: 5 (lower is better)
Translates to: HAFNVVPLFHITPRL*EGIGHHFANSAYAL
Trigger: AAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGAGTGGTACCACATTAAATGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS TCA 90 bp TCATGTGTAACAGTTCTGCTGTCAAGGGCTACAAGGGCTCCATCGTaGCCGAAGATGGAAAATTGTGAGCTGTGGCATAGAGCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: SCVTVLLSRATRAPS*PKMENCELWHRASS
Trigger: TGAACTGGCTCTATGCCACAGCTCACAATTTTCCATCTTCGGTCACGATGGAGCCCTTGTAGCCCTTGACAGCAGAACTGTTACACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 90 bp TCCCTCTCTACTTCCTTCTCCTTCCCCAATCAAGGATGTGGCTGTTaGAGGAGGAACAGGGGTAGAGATACATTTCTAAGTGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SLSTSFSFPNQGCGC*RRNRGRDTFLSEER
Trigger: CCTTTCCTCACTTAGAAATGTATCTCTACCCCTGTTCCTCCTGCAACAGCCACATCCTTGATTGGGGAAGGAGAAGGAAGTAGAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp TGTGGTACCACTCTTTCATATCACCCCCAGACTCTGAGAAGGGATTaGGCACCACTTTGCCAATTCGGCATACGCCCTTCACAATCTTTT +
Preference number: 5 (lower is better)
Translates to: CGTTLSYHPQTLRRD*APLCQFGIRPSQSF
Trigger: AAAAGATTGTGAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGAGTGGTACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS CCA 90 bp CAGTTCTGCTGTCAAGGGCTACAAGGGCTCCATCGTGACCGAAGATaGAAAATTGTGAGCTGTGGCATAGAGCCAGTTCATAGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: QFCCQGLQGLHRDRR*KIVSCGIEPVHSCS
Trigger: ACTACAACTATGAACTGGCTCTATGCCACAGCTCACAATTTTCCATCTTCGGTCACGATGGAGCCCTTGTAGCCCTTGACAGCAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS-3UTR CAA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAAACCAGCTGGGTATTTaGCTGGGGTCCTTGCTGATC +
Preference number: 5 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLNQLGI*LGSLLI
Trigger: GATCAGCAAGGACCCCAGCAAAATACCCAGCTGGTT...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATTTGCCATCTTTGCTGTaGGAGTTACTCAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYLPSLL*ELLSFP
Trigger: AGGGAAGCTGAGTAACTCCAACAGCAAAGATGGCAA...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATTGCATGTTGCCATCTTaGCTGTTGGAGTTACTCAGC +
Preference number: 5 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYCMLPS*LLELLS
Trigger: GCTGAGTAACTCCAACAGCAAAGATGGCAACATGCA...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTCCAGCTTCATTTCAATaGCTCAGCAGCTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCPASFQ*LSSCLW
Trigger: CCACAGACAGCTGCTGAGCAATTGAAATGAAGCTGG...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp AGATCTGTTTCTGACCACTGGCTGAATTGTCTTACATCACGCCAGTaGTGTTTTCGGAATAGGCACAGTTCTTTTCGGCTGAGTGCACGG +
Preference number: 5 (lower is better)
Translates to: RSVSDHWLNCLTSRQ*CFRNRHSSFRLSAR
Trigger: CCGTGCACTCAGCCGAAAAGAACTGTGCCTATTCCGAAAACATCACTGGCGTGATGTAAGACAATTCAGCCAGTGGTCAGAAACAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
CDS TCA 90 bp CAGGAGGCTTACCTAGGAAGGATTTCCATGCCCTACCCTTCTGGGTaGAGACTAGCAGGCAACATATGCAATAGTCAAAGGCCAACATTA +
Preference number: 5 (lower is better)
Translates to: QEAYLGRISMPYPSG*RLAGNICNSQRPTL
Trigger: TAATGTTGGCCTTTGACTATTGCATATGTTGCCTGCTAGTCTTCACCCAGAAGGGTAGGGCATGGAAATCCTTCCTAGGTAAGCCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 90 bp AGGCTGCTTTCTTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTTaGCTGTCTTGTTGTCAATCAGAAGCACTTCAGAATCCAAGATCA +
Preference number: 5 (lower is better)
Translates to: RLLSCVLPESQRAVV*LSCCQSEALQNPRS
Trigger: TGATCTTGGATTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGAAAGCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586058.1
ENST00000590630.5
CDS GCA 90 bp GAGCTAGTACCTTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTTaGCTGTCTTGTTGTCAATCAGAAGCACTTCAGAATCCAAGATCA +
Preference number: 5 (lower is better)
Translates to: ELVPCVLPESQRAVV*LSCCQSEALQNPRS
Trigger: TGATCTTGGATTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGGTACTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588713.1
CDS CCA 90 bp TCAAACTTCTTGTACAGAAGGTTGGGAACACAACCTGGGCTAAACTaGCCCACGTGGTGTGTTGCTGTTTTTACCCTCACCTTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: SNFLYRRLGTQPGLN*PTWCVAVFTLTFVW
Trigger: CCAAACAAAGGTGAGGGTAAAAACAGCAACACACCACGTGGGCCAGTTTAGCCCAGGTTGTGTTCCCAACCTTCTGTACAAGAAGTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp TCATCCTCTTTCAAACTTCTTGTACAGAAGGTTGGGAACACAACCTaGGCTAAACTGGCCCACGTGGTGTGTTGCTGTTTTTACCCTCAC +
Preference number: 5 (lower is better)
Translates to: SSSFKLLVQKVGNTT*AKLAHVVCCCFYPH
Trigger: GTGAGGGTAAAAACAGCAACACACCACGTGGGCCAGTTTAGCCCAGGTTGTGTTCCCAACCTTCTGTACAAGAAGTTTGAAAGAGGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS-3UTR CAA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAGAGTGCACGGAGGGTTaGTGGAAAGAAGATCTTGAA +
Preference number: 5 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLECTEG*WKEDLE
Trigger: TTCAAGATCTTCTTTCCACAAACCCTCCGTGCACTC...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGGATTGGGCACCACTTaGCCAATTCGGCATACGCCC +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFGLGTT*PIRHTP
Trigger: GGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp GCATGTAGAGGTTCAGAAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGAAAATTTCCGGGGATaGGTACTGGTGACAAATGAG +
Preference number: 5 (lower is better)
Translates to: ACRGSEEGGLQHSAGEIYENFRG*VLVTNE
Trigger: CTCATTTGTCACCAGTACCAATCCCCGGAAATTTTC...ATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTTCTGAACCTCTACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTCCTCCTTGGTGAGCTaGGACAGCCGCAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNSSLVS*DSRRRN
Trigger: GTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGA...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGCATTTAAGGTCATaGGCTGTACACCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLMHLRS*AVHLEA
Trigger: TGCCTCCAGGTGTACAGCCAATGACCTTAAATGCAT...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTATGCATTTAAGGTCATaGGCTGTACACCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCMHLRS*AVHLEA
Trigger: TGCCTCCAGGTGTACAGCCAATGACCTTAAATGCAT...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATGCATACTCAACGGACTaGCAGGCCTCCGCCAACATG +
Preference number: 5 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNAYSTD*QASANM
Trigger: CATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGC...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTGGCCTCCTGCACACTaGGTGACTGTGCACCACTTC +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFWPPAH*VTVHHF
Trigger: GAAGTGGTGCACAGTCACCAAGTGTGCAGGAGGCCA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATTTTGCTGGGGTCCTaGCTGATCTTCACCATGTCT +
Preference number: 5 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLILLGS*LIFTMS
Trigger: AGACATGGTGAAGATCAGCAAGGACCCCAGCAAAAT...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGATTTTGCTGGGGTCCTaGCTGATCTTCACCATGTCT +
Preference number: 5 (lower is better)
Translates to: KREASSILLERFMMMMLRILLGS*LIFTMS
Trigger: AGACATGGTGAAGATCAGCAAGGACCCCAGCAAAAT...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CTGACCACAAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAAACTGGTACAGTTCCTaGAGTTGGGGAAGGTTAGTG +
Preference number: 5 (lower is better)
Translates to: LTTNSMLHSHTQTGLFPLNWYSS*SWGRLV
Trigger: CACTAACCTTCCCCAACTCAAGGAACTGTACCAGTT...TAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGAACTGGTACAGTTCCTaGAGTTGGGGAAGGTTAGTG +
Preference number: 5 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLNWYSS*SWGRLV
Trigger: CACTAACCTTCCCCAACTCAAGGAACTGTACCAGTT...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGTTCCCTTCTGCTTTCTaGGTACTGGCTGAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGFPSAF*VLAEGL
Trigger: CAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGAA...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGTTTGCAGTCTGCATGTaGCCATCTTTGCTGTTGGAG +
Preference number: 5 (lower is better)
Translates to: KREASSILLERFMMMMLRFAVCM*PSLLLE
Trigger: CTCCAACAGCAAAGATGGCAACATGCAGACTGCAAA...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTTGTCCAGCAATACCTTaGTTTGGCACAGCGTCTCAT +
Preference number: 5 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCCPAIP*FGTASH
Trigger: ATGAGACGCTGTGCCAAACAAAGGTATTGCTGGACA...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp ATGTGCACATGGCCTGGGATTAGCCTGTGGTTGGGCCAAGTGACCTTGGTCAAGCTGCAAAAAGTTCTATaGAATAGCACTTGTCTACAC +
Preference number: 5 (lower is better)
Translates to: MCTWPGISLWLGQVTLVKLQKVL*NSTCLH
Trigger: GTGTAGACAAGTGCTATTCAATAGAACTTTTTGCAG...CTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATTGGGCCAAGTGACCTaGGTCAAGATGCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLLGQVT*VKMLSV
Trigger: AACACTGAGCATCTTGACCAAGGTCACTTGGCCCAA...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS GCA 90 bp AGATTTATTCTTCCAGTCGCAGTTGACCCAAGGAGTTCTCTGCCCTaGTTTCAAACTTCTAGGACACTGCCTAGCATAGGGTCTTCACTT +
Preference number: 5 (lower is better)
Translates to: RFILPVAVDPRSSLP*FQTSRTLPSIGSSL
Trigger: AAGTGAAGACCCTATGCTAGGCAGTGTCCTAGAAGTTTGAAAGCAGGGCAGAGAACTCCTTGGGTCAACTGCGACTGGAAGAATAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS-3UTR CAA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAAGAGTGCACGGAGGGTTaGTGGAAAGAAGATCTTGAA +
Preference number: 5 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEECTEG*WKEDLE
Trigger: TTCAAGATCTTCTTTCCACAAACCCTCCGTGCACTC...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGCTTCCCCAGAGTTGTaGGGCTTGGCTGAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFASPEL*GLAEKP
Trigger: TGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAGC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGCCATATCATCTGGGTaGCAGTTAAAAATGCGACTG +
Preference number: 5 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCAISSG*QLKMRL
Trigger: CAGTCGCATTTTTAACTGCAACCCAGATGATATGGC...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTGGAAGGCTGCTTTCTaGTGTACTCCCAGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLWKAAF*CTPRVP
Trigger: TGGGACTCTGGGAGTACACAAGAAAGCAGCCTTCCA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGTACAGTTCCTTGAGTaGGGGAAGGTTAGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGVQFLE*GKVSGR
Trigger: TCTGCCACTAACCTTCCCCAACTCAAGGAACTGTAC...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTCACTGGAGAAGACTTaGTGGCCAGCTTCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNSLEKT*WPASPP
Trigger: TGGGGGAGAAGCTGGCCACAAAGTCTTCTCCAGTGA...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AGGGAAAAGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCCAAGACCAATTGGGTaGAAGCACCAAGTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: REKTTENAAPGRTRLCVHPRPIG*KHQVSS
Trigger: TGAACTCACTTGGTGCTTCAACCCAATTGGTCTTGG...ATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCTTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp AGTGGTCTCCATTCTTATGCACCTGGACTCGCTCTCCATCGTACTTaGTCTCAGAGAACATGCCATTGGGACATTTCTTCATTGCATACT +
Preference number: 5 (lower is better)
Translates to: SGLHSYAPGLALHRT*SQRTCHWDISSLHT
Trigger: AGTATGCAATGAAGAAATGTCCCAATGGCATGTTCTCTGAGATCAAGTACGATGGAGAGCGAGTCCAGGTGCATAAGAATGGAGACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000586058.1
ENST00000588713.1
ENST00000590630.5
CDS TCA 90 bp ATTTCTGAGAACATGATCCGGTTTGGAATTTCAACCATGTTGTCATaGAGAAACTTCCGCCGCTCACACAGAGGTCTGTCCATCAAGCTG +
Preference number: 5 (lower is better)
Translates to: ISENMIRFGISTMLS*RNFRRSHRGLSIKL
Trigger: CAGCTTGATGGACAGACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGAAATTCCAAACCGGATCATGTTCTCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586058.1
ENST00000590630.5
CDS TCA 90 bp ATTTCTGAGAACATGATCCGGTTTGGAATTTCAACCATGTTGTCATaGAGAAACTTCCGCCGCTCACACAGAGGTCTGAGGAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: ISENMIRFGISTMLS*RNFRRSHRGLRRTG
Trigger: TCCTGTTCTCCTCAGACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGAAATTCCAAACCGGATCATGTTCTCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586119.1
ENST00000593099.5
CDS TCA 90 bp GTTTACTTCTCTATCTGTCCTTTGAGGCATCAGCTCCCCCAGAGTTaGGCCAGTACTAAACCTAGTTCTTGGCATCAGAAAGTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: VYFSICPLRHQLPQS*ASTKPSSWHQKVLK
Trigger: TTTGAGCACTTTCTGATGCCAAGAACTAGGTTTAGTACTGGCTCAACTCTGGGGGAGCTGATGCCTCAAAGGACAGATAGAGAAGTAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 90 bp CTGTTGGGCTCTGGGGCATTGAACTGTGTTGGACACATGATAGATTaGTTAAAAGTATTAGTTCCTCAGACTCCAGCTTCCTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: LLGSGALNCVGHMID*LKVLVPQTPASFPV
Trigger: GACTGGAAAGGAAGCTGGAGTCTGAGGAACTAATACTTTTAAGCAATCTATCATGTGTCCAACACAGTTCAATGCCCCAGAGCCCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS-3UTR CAA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGCCAGAGTTGTTGGGCTaGGCTGAAAAGCCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGPELLG*AEKPEN
Trigger: ATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTGG...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTGCCTGGGGTCACATTaGCTTGAAGACAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLCLGSH*LEDRLL
Trigger: GAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGCGTCTAACACATGTTTaGCACCTGAGTTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: KREASSILLERFMMMMLRRLTHV*HLSSSS
Trigger: TGAAGATGAACTCAGGTGCAAAACATGTGTTAGACG...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTATGGGACATTTCTTCATaGCATACTCAACGGACTTGC +
Preference number: 5 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLWDISS*HTQRTC
Trigger: GCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCA...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTAACCAGCTGGGTATTTaGCTGGGGTCCTTGCTGATC +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFNQLGI*LGSLLI
Trigger: GATCAGCAAGGACCCCAGCAAAATACCCAGCTGGTT...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGTTCTTTGTAAGCAGGTaGTATGGATCTGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: KREASSILLERFMMMMLRFFVSR*YGSVLR
Trigger: CCTGAGAACAGATCCATACAACCTGCTTACAAAGAA...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGCCCCTCATGGATCCTaGGTTTTAATGATATGGAAA +
Preference number: 5 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCAPHGS*VLMIWK
Trigger: TTTCCATATCATTAAAACCAAGGATCCATGAGGGGC...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 90 bp TGGAATGATAGAACAGGCTTTCTTCTCAGGAAGAGGGGATGTCCATaGAGCAGATCTGTTTCTGACCACTGGCTGAATTGTCTTACATCA +
Preference number: 5 (lower is better)
Translates to: WNDRTGFLLRKRGCP*SRSVSDHWLNCLTS
Trigger: TGATGTAAGACAATTCAGCCAGTGGTCAGAAACAGATCTGCTTCATGGACATCCCCTCTTCCTGAGAAGAAAGCCTGTTCTATCATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
CDS GCA 90 bp TTAAGAGCTATAGCCTCACATTCAGCTCCCCCTATAACGGAAGCTTaGTCAAATGGGTTTCAGTTTCCTAAAACAGTATGTGTCCCAACC +
Preference number: 5 (lower is better)
Translates to: LRAIASHSAPPITEA*SNGFQFPKTVCVPT
Trigger: GGTTGGGACACATACTGTTTTAGGAAACTGAAACCCATTTGAGCAAGCTTCCGTTATAGGGGGAGCTGAATGTGAGGCTATAGCTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586435.1
CDS CCA 90 bp AAGGGCCACAATGATAAAACTGCTACTTCAAGAAAGGGTTTGCCATaGATCAAAGACCTCATGTGTAACAGTTCTGCTGTCAAGGGCTAC +
Preference number: 5 (lower is better)
Translates to: KGHNDKTATSRKGLP*IKDLMCNSSAVKGY
Trigger: GTAGCCCTTGACAGCAGAACTGTTACACATGAGGTCTTTGATCCATGGCAAACCCTTTCTTGAAGTAGCAGTTTTATCATTGTGGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 90 bp GATAATCACACCCAACCTGTTGGGCTCTGGGGCATTGAACTGTGTTaGACACATGATAGATTGCTTAAAAGTATTAGTTCCTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: DNHTQPVGLWGIELC*THDRLLKSISSSDS
Trigger: GGAGTCTGAGGAACTAATACTTTTAAGCAATCTATCATGTGTCCAACACAGTTCAATGCCCCAGAGCCCAACAGGTTGGGTGTGATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS-3UTR CAA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATGACTCTGAGAAGGGATaGGGCACCACTTTGCCAATT +
Preference number: 5 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNDSEKG*GTTLPI
Trigger: AATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTC...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGGCCATATCATCTGGGTaGCAGTTAAAAATGCGACTG +
Preference number: 5 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGAISSG*QLKMRL
Trigger: CAGTCGCATTTTTAACTGCAACCCAGATGATATGGC...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAATCAGAGAACATGCCATaGGGACATTTCTTCATTGCA +
Preference number: 5 (lower is better)
Translates to: PWENKIMCPSAVTEKRKESENMP*GHFFIA
Trigger: TGCAATGAAGAAATGTCCCAATGGCATGTTCTCTGA...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTCGCTCTCCATCGTACTaGATCTCAGAGAACATGCCA +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFRSPSY*ISENMP
Trigger: TGGCATGTTCTCTGAGATCAAGTACGATGGAGAGCG...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTCCAAAGGGCAGTGGTTaGCCTGTCTTGTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFPKGSG*PVLLSI
Trigger: GATTGACAACAAGACAGGCAAACCACTGCCCTTTGG...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATAAGTCTGCCTTCTCCTaGGACAACTGGTACAGTTCC +
Preference number: 5 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNKSAFS*DNWYSS
Trigger: GGAACTGTACCAGTTGTCCAAGGAGAAGGCAGACTT...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AAGAGGGAGGCCTCCAGCATTCTGCTGGAGAGATTTATGATGATGATGTTGAGGTACACCAAATTAAAGTaGGGAGTTCCAAGATCCCAT +
Preference number: 5 (lower is better)
Translates to: KREASSILLERFMMMMLRYTKLK*GVPRSH
Trigger: ATGGGATCTTGGAACTCCCAACTTTAATTTGGTGTA...CCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCTCCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGTGGGACATTTCTTCATaGCATACTCAACGGACTTGC +
Preference number: 5 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLWDISS*HTQRTC
Trigger: GCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCA...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp GCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGGGGTCAGAGAACATGCCATaGGGACATTTCTTCATTGCA +
Preference number: 5 (lower is better)
Translates to: AFPHPDWSFPFNVNFDLGSENMP*GHFFIA
Trigger: TGCAATGAAGAAATGTCCCAATGGCATGTTCTCTGA...CCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTGTACAGTTCCTTGAGTaGGGGAAGGTTAGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: FKENKKMANPAPSSERSIVQFLE*GKVSGR
Trigger: TCTGCCACTAACCTTCCCCAACTCAAGGAACTGTAC...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp TTCAAAGAAAACAAAAAGATGGCAAACCCAGCACCCAGCTCTGAAAGATCTATTAAGTCTGCCTTCTCCTaGGACAACTGGTACAGTTCC +
Preference number: 5 (lower is better)
Translates to: FKENKKMANPAPSSERSIKSAFS*DNWYSS
Trigger: GGAACTGTACCAGTTGTCCAAGGAGAAGGCAGACTT...AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTTGCCATCTTTGCTGTaGGAGTTACTCAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFLPSLL*ELLSFP
Trigger: AGGGAAGCTGAGTAACTCCAACAGCAAAGATGGCAA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp AAACTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTGCATGTTGCCATCTTaGCTGTTGGAGTTACTCAGC +
Preference number: 5 (lower is better)
Translates to: KLNAAFPHPDWSFPFNVNCMLPS*LLELLS
Trigger: GCTGAGTAACTCCAACAGCAAAGATGGCAACATGCA...ATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTTTTGCAGTCTGCATGTaGCCATCTTTGCTGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFFAVCM*PSLLLE
Trigger: CTCCAACAGCAAAGATGGCAACATGCAGACTGCAAA...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CAGGTTACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGCTTGTCTACACTAAATaGTCTCTCTTCCTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: QVTLGDTWYLLDTAVVQLLVYTK*SLFLLF
Trigger: GAACAAAAGGAAGAGAGACAATTTAGTGTAGACAAG...CAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp AGACTACTGAGAATGCAGCCCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTTCTCTTGGATGTGAATaGTTACTTCAAGTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: RLLRMQPLGEQDYVSICCSLGCE*LLQVAF
Trigger: AAAAGCCACTTGAAGTAACAATTCACATCCAAGAGA...ACAGCAGATGGACACATAATCTTGTTCTCCCAGGGGCTGCATTCTCAGTAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGAAAATTTCCGGGGATaGGTACTGGTGACAAATGAG +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFENFRG*VLVTNE
Trigger: CTCATTTGTCACCAGTACCAATCCCCGGAAATTTTC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp TACCCTGGGAGATACATGGTACCTTTTGGATACAGCTGTAGTACAGCTGGACTAATCTTCAGATCATGTTaGATCAACCTGATGATGCAT +
Preference number: 5 (lower is better)
Translates to: YPGRYMVPFGYSCSTAGLIFRSC*INLMMH
Trigger: ATGCATCATCAGGTTGATCAAACATGATCTGAAGAT...TAGTCCAGCTGTACTACAGCTGTATCCAAAAGGTACCATGTATCTCCCAGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp GCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGACTTGCGTCTAACACATGTTTaGCACCTGAGTTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: AAFPHPDWSFPFNVNFDLRLTHV*HLSSSS
Trigger: TGAAGATGAACTCAGGTGCAAAACATGTGTTAGACG...CAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTGGTTTGCCTGTCTTGTaGTCAATCAGAAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFGLPVL*SIRSTS
Trigger: TGAAGTGCTTCTGATTGACAACAAGACAGGCAAACC...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS-3UTR CAA 90 bp CCCTGGGAGAACAAGATTATGTGTCCATCTGCTGTGACTGAGAAGAGAAAGGAATTTATGATGATGATGTaGAGGGCTGCATTGAAATAC +
Preference number: 5 (lower is better)
Translates to: PWENKIMCPSAVTEKRKEFMMMM*RAALKY
Trigger: GTATTTCAATGCAGCCCTCAACATCATCATCATAAA...TTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS-3UTR CAA 90 bp CTCAATGCTGCATTCCCACACCCAGACTGGTCTTTTCCCTTTAATGTAAATTTTATCTTCAGATCATGTTaGATCAACCTGATGATGCAT +
Preference number: 5 (lower is better)
Translates to: LNAAFPHPDWSFPFNVNFIFRSC*INLMMH
Trigger: ATGCATCATCAGGTTGATCAAACATGATCTGAAGAT...AAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262327.9
CDS CCA 72 bp GCTTCCCGCGCCGCTGTCGGAGAGTGGCGGGGACAGTaGGGTCGGCGGCGTAGGCCGCGACCCCCGGCGAGG +
Preference number: 6 (lower is better)
Translates to: ASRAAVGEWRGQ*GRRRRPRPPAR
Trigger: CCTCGCCGGGGGTCGCGGCCTACGCCGCCGACCCCACTGTCCCCGCCACTCTCCGACAGCGGCGCGGGAAGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS TCA 72 bp GCGCTCCTCCACCGGGTCCGGGACGCAGGCGGGAAGTaGTCAAGGCTCCCTGAGTCCCACCCGAGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: ALLHRVRDAGGK*SRLPESHPSAP
Trigger: GGGAGCGCTCGGGTGGGACTCAGGGAGCCTTGATCACTTCCCGCCTGCGTCCCGGACCCGGTGGAGGAGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS CCA 72 bp GCAGCCCAGGGGCCCGAGAAGGAAATCGCTGAGGCCTaGCCGCCGCCGCTTTTCTCGAAGGGCTTCCCGCGC +
Preference number: 6 (lower is better)
Translates to: AAQGPEKEIAEA*PPPLFSKGFPR
Trigger: GCGCGGGAAGCCCTTCGAGAAAAGCGGCGGCGGCCAGGCCTCAGCGATTTCCTTCTCGGGCCCCTGGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS TCA 72 bp GGTCCGGGACGCAGGCGGGAAGTGATCAAGGCTCCCTaGGTCCCACCCGAGCGCTCCCGGTTCAGCGCAGGA +
Preference number: 6 (lower is better)
Translates to: GPGRRREVIKAP*VPPERSRFSAG
Trigger: TCCTGCGCTGAACCGGGAGCGCTCGGGTGGGACTCAGGGAGCCTTGATCACTTCCCGCCTGCGTCCCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS GCA 72 bp TCTCCGGCTCCGGCGCTCACCGTAGGCCTCGGAACTTaGTCATTACAGGCCGCGGGCAGCCCACGACGGTTG +
Preference number: 6 (lower is better)
Translates to: SPAPALTVGLGT*SLQAAGSPRRL
Trigger: CAACCGTCGTGGGCTGCCCGCGGCCTGTAATGAGCAAGTTCCGAGGCCTACGGTGAGCGCCGGAGCCGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262327.9
ENST00000378526.9
CDS CAA 90 bp TATAGCTGCCTCTCCGGCTCCGGCGCTCACCGTAGGCCTCGGAACTaGCTCATTACAGGCCGCGGGCAGCCCACGACGGTTGGAGCGCCT +
Preference number: 6 (lower is better)
Translates to: YSCLSGSGAHRRPRN*LITGRGQPTTVGAP
Trigger: AGGCGCTCCAACCGTCGTGGGCTGCCCGCGGCCTGTAATGAGCAAGTTCCGAGGCCTACGGTGAGCGCCGGAGCCGGAGAGGCAGCTATA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 72 bp CTCTGGCCCGGCTCCTTCTCCACCTCCTGCGCGTTGTaGAGGACCCGCTCCACCACATCCTGCAGGTTGCGC +
Preference number: 6 (lower is better)
Translates to: LWPGSFSTSCAL*RTRSTTSCRLR
Trigger: GCGCAACCTGCAGGATGTGGTGGAGCGGGTCCTTCACAACGCGCAGGAGGTGGAGAAGGAGCCGGGCCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590630.5
CDS TCA 72 bp AACTGCCGCAGCCCAGGGGCCCGAGAAGGAAATCGCTaGGGCCTGGCCGCCGCCGCTTTTCTCGAAGGGCTT +
Preference number: 6 (lower is better)
Translates to: NCRSPGAREGNR*GLAAAAFLEGL
Trigger: AAGCCCTTCGAGAAAAGCGGCGGCGGCCAGGCCTCAGCGATTTCCTTCTCGGGCCCCTGGGCTGCGGCAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS TCA 72 bp CATGAATGCGCTGGTTGTGGGGGAGGGAGGCTGTTCTaGGCTCTCCTCACAACTGCCGCAGCCCAGGGGCCC +
Preference number: 6 (lower is better)
Translates to: HECAGCGGGRLF*ALLTTAAAQGP
Trigger: GGGCCCCTGGGCTGCGGCAGTTGTGAGGAGAGCTCAGAACAGCCTCCCTCCCCCACAACCAGCGCATTCATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS CCA 72 bp GCCAACATGGGCTGCACAGGTGTCATCAGCGAGGCCTaGACGCTCAGAGCTCGTCTCTGGCCCGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: ANMGCTGVISEA*TLRARLWPGSF
Trigger: GAAGGAGCCGGGCCAGAGACGAGCTCTGAGCGTCCAGGCCTCGCTGATGACACCTGTGCAGCCCATGTTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590630.5
CDS GCA 72 bp AAGGCTCCTCAGGTGGGAGGAGAGTCACCAAGCCAGTaGCCTCTCCCCGACTCGCTGCTTGCTGGACCTGCT +
Preference number: 6 (lower is better)
Translates to: KAPQVGGESPSQ*PLPDSLLAGPA
Trigger: AGCAGGTCCAGCAAGCAGCGAGTCGGGGAGAGGGCACTGGCTTGGTGACTCTCCTCCCACCTGAGGAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 72 bp CTGCAGGCGGGCAAGCGTGGCATCATCATGGCCTCCTaGACACTTGGTGACTGTGCACCACTTCTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LQAGKRGIIMAS*TLGDCAPLLAA
Trigger: GGCAGCCAGAAGTGGTGCACAGTCACCAAGTGTGCAGGAGGCCATGATGATGCCACGCTTGCCCGCCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586119.1
ENST00000593099.5
CDS GCA 72 bp AGTACCACCCCAGGGGGCAGAGGCCACCCTGACCTTTaGTCCCTTGCCCATAGAAGGCTCCAAGGACCACCA +
Preference number: 6 (lower is better)
Translates to: STTPGGRGHPDL*SLAHRRLQGPP
Trigger: TGGTGGTCCTTGGAGCCTTCTATGGGCAAGGGAGCAAAGGTCAGGGTGGCCTCTGCCCCCTGGGGTGGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp TCCCTTCTGCTTTCTTGGTACTGGCTGAGGGCTTGCTaGGGGCCTTGCGGGACACAGCAGACCCTGAGGGAC +
Preference number: 6 (lower is better)
Translates to: SLLLSWYWLRAC*GPCGTQQTLRD
Trigger: GTCCCTCAGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS CAA 72 bp CGGGCAAGCGTGGCATCATCATGGCCTCCTGCACACTaGGTGACTGTGCACCACTTCTGGCTGCCAGGGTCG +
Preference number: 6 (lower is better)
Translates to: RASVASSWPPAH*VTVHHFWLPGS
Trigger: CGACCCTGGCAGCCAGAAGTGGTGCACAGTCACCAAGTGTGCAGGAGGCCATGATGATGCCACGCTTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586119.1
ENST00000593099.5
CDS TCA 72 bp CTGGCCGCCTCTGCAAGGCAACAAGAGGACATAGGGTaGGCAGCAGCATTGCTGACCCTGCCCACGACAGAG +
Preference number: 6 (lower is better)
Translates to: LAASARQQEDIG*AAALLTLPTTE
Trigger: CTCTGTCGTGGGCAGGGTCAGCAATGCTGCTGCTCACCCTATGTCCTCTTGTTGCCTTGCAGAGGCGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592244.1
ENST00000593099.5
CDS GCA 72 bp CTAGCAGGGAGCTACCAGTCTCCGTTTCCGGATACATaGCCAAATCCACTCTGGGGAGACCTGCTGGGCCGC +
Preference number: 6 (lower is better)
Translates to: LAGSYQSPFPDT*PNPLWGDLLGR
Trigger: GCGGCCCAGCAGGTCTCCCCAGAGTGGATTTGGGCATGTATCCGGAAACGGAGACTGGTAGCTCCCTGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS CCA 72 bp AGAGGCTGCAGGTGCCTGGCTTGGCAAAACCCCACCTaGAATGTAGCCTACCCTCCCTCCCGTTCCTCTGAC +
Preference number: 6 (lower is better)
Translates to: RGCRCLAWQNPT*NVAYPPSRSSD
Trigger: GTCAGAGGAACGGGAGGGAGGGTAGGCTACATTCCAGGTGGGGTTTTGCCAAGCCAGGCACCTGCAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586435.1
CDS CAA 72 bp GCTTTCTTGGTACTGGCTGAGGGCTTGCTGGGGGCCTaGCGGGACACAGCAGACCCTGAGGGACCCTTATTC +
Preference number: 6 (lower is better)
Translates to: AFLVLAEGLLGA*RDTADPEGPLF
Trigger: GAATAAGGGTCCCTCAGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS CAA 72 bp AGCTTCCCTTCTGCTTTCTTGGTACTGGCTGAGGGCTaGCTGGGGGCCTTGCGGGACACAGCAGACCCTGAG +
Preference number: 6 (lower is better)
Translates to: SFPSAFLVLAEG*LGALRDTADPE
Trigger: CTCAGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS TCA 72 bp CCCGCTCCACCACATCCTGCAGGTTGCGCGAGGCTTTaGAGGCTTCATAGGCATTGGGGTCAAGGGCGTCTA +
Preference number: 6 (lower is better)
Translates to: PAPPHPAGCARL*RLHRHWGQGRL
Trigger: TAGACGCCCTTGACCCCAATGCCTATGAAGCCTTCAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS GCA 72 bp GCTGTACACCTGGAGGCAATGTCCTGTAGGGCCTGTTaGTGCTCATCCTCCTTGGTGAGCTTGGACAGCCGC +
Preference number: 6 (lower is better)
Translates to: AVHLEAMSCRAC*CSSSLVSLDSR
Trigger: GCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGCCTCCAGGTGTACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS GCA 72 bp CAGTCTCTCCTGGCTAGGCCGGGCTGTTCTATCTCCTaGCTGCTGGCACAGTTCTTCCTCTCTGCTCACTGG +
Preference number: 6 (lower is better)
Translates to: QSLLARPGCSIS*LLAQFFLSAHW
Trigger: CCAGTGAGCAGAGAGGAAGAACTGTGCCAGCAGGCAGGAGATAGAACAGCCCGGCCTAGCCAGGAGAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000592244.1
ENST00000593099.5
CDS GCA 72 bp CCAGTGCCCTCTCCCCGACTCGCTGCTTGCTGGACCTaGTTCCACCCTGACCACAAACTCAATGCTGCATTC +
Preference number: 6 (lower is better)
Translates to: PVPSPRLAACWT*FHPDHKLNAAF
Trigger: GAATGCAGCATTGAGTTTGTGGTCAGGGTGGAAGCAGGTCCAGCAAGCAGCGAGTCGGGGAGAGGGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 72 bp GTCACCAAGCCAGTGCCCTCTCCCCGACTCGCTGCTTaGTGGACCTGCTTCCACCCTGACCACAAACTCAAT +
Preference number: 6 (lower is better)
Translates to: VTKPVPSPRLAA*WTCFHPDHKLN
Trigger: ATTGAGTTTGTGGTCAGGGTGGAAGCAGGTCCAGCAAGCAGCGAGTCGGGGAGAGGGCACTGGCTTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp ACCAAGCCAGTGCCCTCTCCCCGACTCGCTGCTTGCTaGACCTGCTTCCACCCTGACCACAAACTCAATGCT +
Preference number: 6 (lower is better)
Translates to: TKPVPSPRLAAC*TCFHPDHKLNA
Trigger: AGCATTGAGTTTGTGGTCAGGGTGGAAGCAGGTCCAGCAAGCAGCGAGTCGGGGAGAGGGCACTGGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp GCCTTGTGCTGTGAGACTTCTATGCTTACTCCTGGATaGCGGTGGGGAGCGTGGGGGCGCAATGACATGGGT +
Preference number: 6 (lower is better)
Translates to: ALCCETSMLTPG*RWGAWGRNDMG
Trigger: ACCCATGTCATTGCGCCCCCACGCTCCCCACCGCCATCCAGGAGTAAGCATAGAAGTCTCACAGCACAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 90 bp TTTGCAGCCAGCTGTGCCACGCTTGGCATAGTCCACACAGAACCGTaGCTCAGCCATCTCACAGGGGCCACTGCAGAGTCCCACATGCAA +
Preference number: 6 (lower is better)
Translates to: FAASCATLGIVHTEP*LSHLTGATAESHMQ
Trigger: TTGCATGTGGGACTCTGCAGTGGCCCCTGTGAGATGGCTGAGCAACGGTTCTGTGTGGACTATGCCAAGCGTGGCACAGCTGGCTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS CAA 90 bp CACCTGGAGGCAATGTCCTGTAGGGCCTGTTGCTGCTCATCCTCCTaGGTGAGCTTGGACAGCCGCAGAAGGAACTCATCCACTTCCTGG +
Preference number: 6 (lower is better)
Translates to: HLEAMSCRACCCSSS*VSLDSRRRNSSTSW
Trigger: CCAGGAAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGCCTCCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS CAA 90 bp TTCCCTTCTGCTTTCTTGGTACTGGCTGAGGGCTTGCTGGGGGCCTaGCGGGACACAGCAGACCCTGAGGGACCCTTATTCTCTTCACTG +
Preference number: 6 (lower is better)
Translates to: FPSAFLVLAEGLLGA*RDTADPEGPLFSSL
Trigger: CAGTGAAGAGAATAAGGGTCCCTCAGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS CAA 90 bp CATGCCCAAATCCACTCTGGGGAGACCTGCTGGGCCGCAGGGTTCTaGTCCCTGCTACCCAGCACGTGCGTGGCTGAAGTCATATCAAAT +
Preference number: 6 (lower is better)
Translates to: HAQIHSGETCWAAGF*SLLPSTCVAEVISN
Trigger: ATTTGATATGACTTCAGCCACGCACGTGCTGGGTAGCAGGGACAAGAACCCTGCGGCCCAGCAGGTCTCCCCAGAGTGGATTTGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS TCA 72 bp TCCCCGACTCGCTGCTTGCTGGACCTGCTTCCACCCTaGCCACAAACTCAATGCTGCATTCCCACACCCAGA +
Preference number: 6 (lower is better)
Translates to: SPTRCLLDLLPP*PQTQCCIPTPR
Trigger: TCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAGGGTGGAAGCAGGTCCAGCAAGCAGCGAGTCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 72 bp CACCTGGAATGTAGCCTACCCTCCCTCCCGTTCCTCTaGCCTGCTCTAGGTCCCGTGCCATATCATCTGGGT +
Preference number: 6 (lower is better)
Translates to: HLECSLPSLPFL*PALGPVPYHLG
Trigger: ACCCAGATGATATGGCACGGGACCTAGAGCAGGTCAGAGGAACGGGAGGGAGGGTAGGCTACATTCCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586435.1
CDS GCA 72 bp GTACACCTGGAGGCAATGTCCTGTAGGGCCTGTTGCTaGTCATCCTCCTTGGTGAGCTTGGACAGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: VHLEAMSCRACC*SSSLVSLDSRR
Trigger: TCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGCCTCCAGGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS CCA 72 bp GTAGCGTCTGAGACGGCTGAAGTCTGGTGTGGAGGGTaGCAAGTAAAGCCGCACCCCAGTGAAGATGTCCAG +
Preference number: 6 (lower is better)
Translates to: VASETAEVWCGG*QVKPHPSEDVQ
Trigger: CTGGACATCTTCACTGGGGTGCGGCTTTACTTGCCACCCTCCACACCAGACTTCAGCCGTCTCAGACGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378526.9
ENST00000592244.1
ENST00000593099.5
CDS CCA 72 bp GAAGAGTACATGTGTATAAGAGCCACCCAGTCATGGTaGGCAGGCGGAGCTGGCTCTGACTCAGTGCCCCCA +
Preference number: 6 (lower is better)
Translates to: EEYMCIRATQSW*AGGAGSDSVPP
Trigger: TGGGGGCACTGAGTCAGAGCCAGCTCCGCCTGCCCACCATGACTGGGTGGCTCTTATACACATGTACTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp TGGGAAGAGTACATGTGTATAAGAGCCACCCAGTCATaGTGGGCAGGCGGAGCTGGCTCTGACTCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: WEEYMCIRATQS*WAGGAGSDSVP
Trigger: GGGCACTGAGTCAGAGCCAGCTCCGCCTGCCCACCATGACTGGGTGGCTCTTATACACATGTACTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 72 bp CTGGCTGCCAGGGTCGTAGCAGCCCATGAGGAAGATTaGCATCATGCCGCCTTTGCTCCCTTGCCCATAGAA +
Preference number: 6 (lower is better)
Translates to: LAARVVAAHEED*HHAAFAPLPIE
Trigger: TTCTATGGGCAAGGGAGCAAAGGCGGCATGATGTCAATCTTCCTCATGGGCTGCTACGACCCTGGCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586119.1
CDS TCA 72 bp TGCACCACTTCTGGCTGCCAGGGTCGTAGCAGCCCATaGGGAAGATTGACATCATGCCGCCTTTGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: CTTSGCQGRSSP*GRLTSCRLCSL
Trigger: AAGGGAGCAAAGGCGGCATGATGTCAATCTTCCTCATGGGCTGCTACGACCCTGGCAGCCAGAAGTGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586119.1
CDS TCA 72 bp CTGGTGTGGAGGGTGGCAAGTAAAGCCGCACCCCAGTaGAGATGTCCAGCAATACCTGCAAATGCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: LVWRVASKAAPQ*RCPAIPANAEG
Trigger: CCCCTCTGCATTTGCAGGTATTGCTGGACATCTTCACTGGGGTGCGGCTTTACTTGCCACCCTCCACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 72 bp TGGGCCGCAGGGTTCTTGTCCCTGCTACCCAGCACGTaGGTGGCTGAAGTCATATCAAATTCCTGTACCAGG +
Preference number: 6 (lower is better)
Translates to: WAAGFLSLLPST*VAEVISNSCTR
Trigger: CCTGGTACAGGAATTTGATATGACTTCAGCCACGCACGTGCTGGGTAGCAGGGACAAGAACCCTGCGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS CCA 72 bp AGTTCATTCTGCAGGCGGGCAAGCGTGGCATCATCATaGCCTCCTGCACACTTGGTGACTGTGCACCACTTC +
Preference number: 6 (lower is better)
Translates to: SSFCRRASVASS*PPAHLVTVHHF
Trigger: GAAGTGGTGCACAGTCACCAAGTGTGCAGGAGGCCATGATGATGCCACGCTTGCCCGCCTGCAGAATGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586119.1
ENST00000593099.5
CDS CCA 72 bp GAATGCCACAAAGTAGCGTCTGAGACGGCTGAAGTCTaGTGTGGAGGGTGGCAAGTAAAGCCGCACCCCAGT +
Preference number: 6 (lower is better)
Translates to: ECHKVASETAEV*CGGWQVKPHPS
Trigger: ACTGGGGTGCGGCTTTACTTGCCACCCTCCACACCAGACTTCAGCCGTCTCAGACGCTACTTTGTGGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378526.9
ENST00000592244.1
ENST00000593099.5
CDS CCA 72 bp CCGCAGGGTTCTTGTCCCTGCTACCCAGCACGTGCGTaGCTGAAGTCATATCAAATTCCTGTACCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: PQGSCPCYPARA*LKSYQIPVPGP
Trigger: GGGACCTGGTACAGGAATTTGATATGACTTCAGCCACGCACGTGCTGGGTAGCAGGGACAAGAACCCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS CCA 72 bp TGCTGTGAGACTTCTATGCTTACTCCTGGATGGCGGTaGGGAGCGTGGGGGCGCAATGACATGGGTGTCAAT +
Preference number: 6 (lower is better)
Translates to: CCETSMLTPGWR*GAWGRNDMGVN
Trigger: ATTGACACCCATGTCATTGCGCCCCCACGCTCCCCACCGCCATCCAGGAGTAAGCATAGAAGTCTCACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp GGGTCAGGGTGGGGTCAGACCTACACTGGGTACAGATaGGTCTTCACCCAAATGAGCACGGGACAGAATGAG +
Preference number: 6 (lower is better)
Translates to: GSGWGQTYTGYR*VFTQMSTGQNE
Trigger: CTCATTCTGTCCCGTGCTCATTTGGGTGAAGACCCATCTGTACCCAGTGTAGGTCTGACCCCACCCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp AAATGCAGAGGGGTCAGGGTGGGGTCAGACCTACACTaGGTACAGATGGGTCTTCACCCAAATGAGCACGGG +
Preference number: 6 (lower is better)
Translates to: KCRGVRVGSDLH*VQMGLHPNEHG
Trigger: CCCGTGCTCATTTGGGTGAAGACCCATCTGTACCCAGTGTAGGTCTGACCCCACCCTGACCCCTCTGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 72 bp TGTAGGGCCTGTTGCTGCTCATCCTCCTTGGTGAGCTaGGACAGCCGCAGAAGGAACTCATCCACTTCCTGG +
Preference number: 6 (lower is better)
Translates to: CRACCCSSSLVS*DSRRRNSSTSW
Trigger: CCAGGAAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS CAA 72 bp GCAATGTCCTGTAGGGCCTGTTGCTGCTCATCCTCCTaGGTGAGCTTGGACAGCCGCAGAAGGAACTCATCC +
Preference number: 6 (lower is better)
Translates to: AMSCRACCCSSS*VSLDSRRRNSS
Trigger: GGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS CAA 90 bp GCAATGTCCTGTAGGGCCTGTTGCTGCTCATCCTCCTTGGTGAGCTaGGACAGCCGCAGAAGGAACTCATCCACTTCCTGGATGGTAAGG +
Preference number: 6 (lower is better)
Translates to: AMSCRACCCSSSLVS*DSRRRNSSTSWMVR
Trigger: CCTTACCATCCAGGAAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS TCA 72 bp TGTCCTGTAGGGCCTGTTGCTGCTCATCCTCCTTGGTaGGCTTGGACAGCCGCAGAAGGAACTCATCCACTT +
Preference number: 6 (lower is better)
Translates to: CPVGPVAAHPPW*AWTAAEGTHPL
Trigger: AAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAACAGGCCCTACAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS TCA 72 bp CAGCGAGGGAATCGGATGGAGATCCCGTCAGCTGTATaGGCCTCCGATTTGGAGAATTCAGCCCCTGTGATC +
Preference number: 6 (lower is better)
Translates to: QRGNRMEIPSAV*ASDLENSAPVI
Trigger: GATCACAGGGGCTGAATTCTCCAAATCGGAGGCTCATACAGCTGACGGGATCTCCATCCGATTCCCTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS TCA 72 bp CTGGTGTGGAGGGTGGCAAGTAAAGCCGCACCCCAGTaGAGATGTCCAGCAATACCTTTGTTTGGCACAGCG +
Preference number: 6 (lower is better)
Translates to: LVWRVASKAAPQ*RCPAIPLFGTA
Trigger: CGCTGTGCCAAACAAAGGTATTGCTGGACATCTTCACTGGGGTGCGGCTTTACTTGCCACCCTCCACACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378526.9
CDS TCA 72 bp AGGGTTCTTGTCCCTGCTACCCAGCACGTGCGTGGCTaGAGTCATATCAAATTCCTGTACCAGGTCCCCGTC +
Preference number: 6 (lower is better)
Translates to: RVLVPATQHVRG*SHIKFLYQVPV
Trigger: GACGGGGACCTGGTACAGGAATTTGATATGACTTCAGCCACGCACGTGCTGGGTAGCAGGGACAAGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS GCA 72 bp GGGTCCTTGCTGATCTTCACCATGTCTAGTTCATTCTaGAGGCGGGCAAGCGTGGCATCATCATGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GSLLIFTMSSSF*RRASVASSWPP
Trigger: AGGAGGCCATGATGATGCCACGCTTGCCCGCCTGCAGAATGAACTAGACATGGTGAAGATCAGCAAGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586119.1
ENST00000593099.5
CDS GCA 72 bp TGGCAGATTTCCAGTCCTTATCATCTCGGATTCGGGTaGAGCGAGGGAATCGGATGGAGATCCCGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: WQISSPYHLGFG*SEGIGWRSRQL
Trigger: CAGCTGACGGGATCTCCATCCGATTCCCTCGCTGCACCCGAATCCGAGATGATAAGGACTGGAAATCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS CCA 72 bp TATCATCTCGGATTCGGGTGCAGCGAGGGAATCGGATaGAGATCCCGTCAGCTGTATGAGCCTCCGATTTGG +
Preference number: 6 (lower is better)
Translates to: YHLGFGCSEGIG*RSRQLYEPPIW
Trigger: CCAAATCGGAGGCTCATACAGCTGACGGGATCTCCATCCGATTCCCTCGCTGCACCCGAATCCGAGATGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000593099.5
CDS CCA 72 bp TGTCCAGCAATACCTGCAAATGCAGAGGGGTCAGGGTaGGGTCAGACCTACACTGGGTACAGATGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: CPAIPANAEGSG*GQTYTGYRWVF
Trigger: GAAGACCCATCTGTACCCAGTGTAGGTCTGACCCCACCCTGACCCCTCTGCATTTGCAGGTATTGCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 72 bp AAGGCCTATTCAGGATGCTCATGCCACACCTCCTGCTaGGCCTTTCCGAAGGAAGTCCTGGATGATCTGGGT +
Preference number: 6 (lower is better)
Translates to: KAYSGCSCHTSC*AFPKEVLDDLG
Trigger: ACCCAGATCATCCAGGACTTCCTTCGGAAAGGCTCAGCAGGAGGTGTGGCATGAGCATCCTGAATAGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590181.5
CDS CCA 72 bp AGGCTCCAAGGACCACCAGGTCAGCTGTGTCGGCCATaGCCCCCTCGTTCAAATAGTCTTTCTTCACTTTCA +
Preference number: 6 (lower is better)
Translates to: RLQGPPGQLCRP*PPRSNSLSSLS
Trigger: TGAAAGTGAAGAAAGACTATTTGAACGAGGGGGCCATGGCCGACACAGCTGACCTGGTGGTCCTTGGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586119.1
ENST00000593099.5
CDS CAA 72 bp CCATTGGGACATTTCTTCATTGCATACTCAACGGACTaGCAGGCCTCCGCCAACATGGGCTGCACAGGTGTC +
Preference number: 6 (lower is better)
Translates to: PLGHFFIAYSTD*QASANMGCTGV
Trigger: GACACCTGTGCAGCCCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590630.5
CDS CAA 72 bp GGCCCACGTGGTGTGTTGCTGTTTTTACCCTCACCTTaGTTTGGCACAGCGTCTCATCAGCAGCTTTCCGCT +
Preference number: 6 (lower is better)
Translates to: GPRGVLLFLPSP*FGTASHQQLSA
Trigger: AGCGGAAAGCTGCTGATGAGACGCTGTGCCAAACAAAGGTGAGGGTAAAAACAGCAACACACCACGTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 72 bp CCATTGGGACATTTCTTCATTGCATACTCAACGGACTaGCAGGCCTCCGCCTTGGGGTGGGGAAAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: PLGHFFIAYSTD*QASALGWGKQS
Trigger: GCTTTGCTTTCCCCACCCCAAGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586058.1
CDS CAA 90 bp GAGAACATGCCATTGGGACATTTCTTCATTGCATACTCAACGGACTaGCAGGCCTCCGCCTTGGGGTGGGGAAAGCAAAGCCTGGAGACT +
Preference number: 6 (lower is better)
Translates to: ENMPLGHFFIAYSTD*QASALGWGKQSLET
Trigger: AGTCTCCAGGCTTTGCTTTCCCCACCCCAAGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCAATGGCATGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586058.1
CDS TCA 72 bp AGACCTACACTGGGTACAGATGGGTCTTCACCCAAATaGGCACGGGACAGAATGAGGGAGCCTAGAGTTAGG +
Preference number: 6 (lower is better)
Translates to: RPTLGTDGSSPK*ARDRMREPRVR
Trigger: CCTAACTCTAGGCTCCCTCATTCTGTCCCGTGCTCATTTGGGTGAAGACCCATCTGTACCCAGTGTAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 72 bp CACCCCCAGACTCTGAGAAGGGATTGGGCACCACTTTaGCAATTCGGCATACGCCCTTCACAATCTTTTCCT +
Preference number: 6 (lower is better)
Translates to: HPQTLRRDWAPL*QFGIRPSQSFP
Trigger: AGGAAAAGATTGTGAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS GCA 72 bp CATTGGGACATTTCTTCATTGCATACTCAACGGACTTaGAGGCCTCCGCCAACATGGGCTGCACAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: HWDISSLHTQRT*RPPPTWAAQVS
Trigger: TGACACCTGTGCAGCCCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590630.5
CDS GCA 72 bp CTTCCAGTCGCAGTTGACCCAAGGAGTTCTCTGCCCTaGTTTCAAACTTCTAGGACACTGCCTAGCATAGGG +
Preference number: 6 (lower is better)
Translates to: LPVAVDPRSSLP*FQTSRTLPSIG
Trigger: CCCTATGCTAGGCAGTGTCCTAGAAGTTTGAAAGCAGGGCAGAGAACTCCTTGGGTCAACTGCGACTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp ATCCACTTCCTGGATGGTAAGGAGGCTCTTGGCAGCTaGGGGGAAAGACTTGCTCTGCTCAAAGAAGACTCT +
Preference number: 6 (lower is better)
Translates to: IHFLDGKEALGS*GERLALLKEDS
Trigger: AGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCCCCCAGCTGCCAAGAGCCTCCTTACCATCCAGGAAGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS CCA 72 bp ACTTCTATGCTTACTCCTGGATGGCGGTGGGGAGCGTaGGGGCGCAATGACATGGGTGTCAATCATATGTTT +
Preference number: 6 (lower is better)
Translates to: TSMLTPGWRWGA*GRNDMGVNHMF
Trigger: AAACATATGATTGACACCCATGTCATTGCGCCCCCACGCTCCCCACCGCCATCCAGGAGTAAGCATAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp GAAAAGGAGAGTGGACAGGCCTCGACATCTGGGACCTaGAGATGGGAAGAGTACATGTGTATAAGAGCCACC +
Preference number: 6 (lower is better)
Translates to: EKESGQASTSGT*RWEEYMCIRAT
Trigger: GGTGGCTCTTATACACATGTACTCTTCCCATCTCCAGGTCCCAGATGTCGAGGCCTGTCCACTCTCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 72 bp TCACCCCCAGACTCTGAGAAGGGATTGGGCACCACTTaGCCAATTCGGCATACGCCCTTCACAATCTTTTCC +
Preference number: 6 (lower is better)
Translates to: SPPDSEKGLGTT*PIRHTPFTIFS
Trigger: GGAAAAGATTGTGAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS CAA 72 bp CACTCTTTCATATCACCCCCAGACTCTGAGAAGGGATaGGGCACCACTTTGCCAATTCGGCATACGCCCTTC +
Preference number: 6 (lower is better)
Translates to: HSFISPPDSEKG*GTTLPIRHTPF
Trigger: GAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS CAA 72 bp GGTTTCTACAGGTCTGTTGGGGACCGAGTTCAGGCCTaGTGCTGTGAGACTTCTATGCTTACTCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: GFYRSVGDRVQA*CCETSMLTPGW
Trigger: CCATCCAGGAGTAAGCATAGAAGTCTCACAGCACAAGGCCTGAACTCGGTCCCCAACAGACCTGTAGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 90 bp AAACTGGCCCACGTGGTGTGTTGCTGTTTTTACCCTCACCTTTGTTaGGCACAGCGTCTCATCAGCAGCTTTCCGCTTCTCCCCTACTTT +
Preference number: 6 (lower is better)
Translates to: KLAHVVCCCFYPHLC*AQRLISSFPLLPYF
Trigger: AAAGTAGGGGAGAAGCGGAAAGCTGCTGATGAGACGCTGTGCCAAACAAAGGTGAGGGTAAAAACAGCAACACACCACGTGGGCCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 72 bp GAGACCAAGCAGTCTACTCTGTACAACCTGCTAGACTaGGGGGTCAGGAGTCCTGCTTACTACTCTCAATGG +
Preference number: 6 (lower is better)
Translates to: ETKQSTLYNLLD*GVRSPAYYSQW
Trigger: CCATTGAGAGTAGTAAGCAGGACTCCTGACCCCTCAGTCTAGCAGGTTGTACAGAGTAGACTGCTTGGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 72 bp CAGATGGGTCTTCACCCAAATGAGCACGGGACAGAATaGGGGAGCCTAGAGTTAGGACACAAGCAGAGAAGT +
Preference number: 6 (lower is better)
Translates to: QMGLHPNEHGTE*GSLELGHKQRS
Trigger: ACTTCTCTGCTTGTGTCCTAACTCTAGGCTCCCTCATTCTGTCCCGTGCTCATTTGGGTGAAGACCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 72 bp TCTCACAGGGTAGTTGGGAAAATTACAAGGAATCCATaGATGCGCTGGTTGTGGGGGAGGGAGGCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: SHRVVGKITRNP*MRWLWGREAVL
Trigger: CAGAACAGCCTCCCTCCCCCACAACCAGCGCATTCATGGATTCCTTGTAATTTTCCCAACTACCCTGTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586407.1
CDS GCA 72 bp AGTCATATCAAATTCCTGTACCAGGTCCCCGTCGAATaGCACAAAGTAGCGTCTGAGACGGCTGAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: SHIKFLYQVPVE*HKVASETAEVW
Trigger: CCAGACTTCAGCCGTCTCAGACGCTACTTTGTGGCATTCGACGGGGACCTGGTACAGGAATTTGATATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378526.9
ENST00000593099.5
CDS GCA 72 bp TCTGTACAACCTGCTAGACTGAGGGGTCAGGAGTCCTaGTTACTACTCTCAATGGGTTCAAGGACTTCAGGC +
Preference number: 6 (lower is better)
Translates to: SVQPARLRGQES*LLLSMGSRTSG
Trigger: GCCTGAAGTCCTTGAACCCATTGAGAGTAGTAAGCAGGACTCCTGACCCCTCAGTCTAGCAGGTTGTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp ACTCTTTCATATCACCCCCAGACTCTGAGAAGGGATTaGGCACCACTTTGCCAATTCGGCATACGCCCTTCA +
Preference number: 6 (lower is better)
Translates to: TLSYHPQTLRRD*APLCQFGIRPS
Trigger: TGAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS CCA 72 bp AGGTTGGGAACACAACCTGGGCTAAACTGGCCCACGTaGTGTGTTGCTGTTTTTACCCTCACCTTTGTTTGG +
Preference number: 6 (lower is better)
Translates to: RLGTQPGLNWPT*CVAVFTLTFVW
Trigger: CCAAACAAAGGTGAGGGTAAAAACAGCAACACACCACGTGGGCCAGTTTAGCCCAGGTTGTGTTCCCAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp TTGTACAGAAGGTTGGGAACACAACCTGGGCTAAACTaGCCCACGTGGTGTGTTGCTGTTTTTACCCTCACC +
Preference number: 6 (lower is better)
Translates to: LYRRLGTQPGLN*PTWCVAVFTLT
Trigger: GGTGAGGGTAAAAACAGCAACACACCACGTGGGCCAGTTTAGCCCAGGTTGTGTTCCCAACCTTCTGTACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 72 bp CCACCCATGGCCTCCCCTATAATCCGGAGCTTCCTGTaGTCAGTCTCTTCTGAAATCAAAACCTCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: PPMASPIIRSFL*SVSSEIKTSEL
Trigger: CAGCTCAGAGGTTTTGATTTCAGAAGAGACTGACAACAGGAAGCTCCGGATTATAGGGGAGGCCATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 72 bp CACGTGGTGTGTTGCTGTTTTTACCCTCACCTTTGTTaGGCACAGCGTCTCATCAGCAGCTTTCCGCTTCTC +
Preference number: 6 (lower is better)
Translates to: HVVCCCFYPHLC*AQRLISSFPLL
Trigger: GAGAAGCGGAAAGCTGCTGATGAGACGCTGTGCCAAACAAAGGTGAGGGTAAAAACAGCAACACACCACGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 90 bp TTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTTGCCTGTCTTGTaGTCAATCAGAAGCACTTCAGAATCCAAGATCATGCTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: LCTPRVPKGSGLPVL*SIRSTSESKIMLWP
Trigger: GGGCCACAGCATGATCTTGGATTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586058.1
ENST00000588713.1
ENST00000590630.5
CDS CAA 90 bp GGCTGCAGGCAGGGAAGAGGTTTAGCCGATGTTCCCCAAACACCTTaGCTCATCCTCTTTCAAACTTCTTGTACAGAAGGTTGGGAACAC +
Preference number: 6 (lower is better)
Translates to: GCRQGRGLADVPQTP*LILFQTSCTEGWEH
Trigger: GTGTTCCCAACCTTCTGTACAAGAAGTTTGAAAGAGGATGAGCAAAGGTGTTTGGGGAACATCGGCTAAACCTCTTCCCTGCCTGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592244.1
ENST00000593099.5
CDS TCA 72 bp AATGTGGTACCACTCTTTCATATCACCCCCAGACTCTaGGAAGGGATTGGGCACCACTTTGCCAATTCGGCA +
Preference number: 6 (lower is better)
Translates to: NVVPLFHITPRL*EGIGHHFANSA
Trigger: TGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGAGTGGTACCACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS TCA 72 bp ACAGTTCTGCTGTCAAGGGCTACAAGGGCTCCATCGTaGCCGAAGATGGAAAATTGTGAGCTGTGGCATAGA +
Preference number: 6 (lower is better)
Translates to: TVLLSRATRAPS*PKMENCELWHR
Trigger: TCTATGCCACAGCTCACAATTTTCCATCTTCGGTCACGATGGAGCCCTTGTAGCCCTTGACAGCAGAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp TGTCAAGGGCTACAAGGGCTCCATCGTGACCGAAGATaGAAAATTGTGAGCTGTGGCATAGAGCCAGTTCAT +
Preference number: 6 (lower is better)
Translates to: CQGLQGLHRDRR*KIVSCGIEPVH
Trigger: ATGAACTGGCTCTATGCCACAGCTCACAATTTTCCATCTTCGGTCACGATGGAGCCCTTGTAGCCCTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 90 bp ATGTGGTACCACTCTTTCATATCACCCCCAGACTCTGAGAAGGGATaGGGCACCACTTTGCCAATTCGGCATACGCCCTTCACAATCTTT +
Preference number: 6 (lower is better)
Translates to: MWYHSFISPPDSEKG*GTTLPIRHTPFTIF
Trigger: AAAGATTGTGAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGAGTGGTACCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS CAA 90 bp CCCGTTCCTCTGACCTGCTCTAGGTCCCGTGCCATATCATCTGGGTaGCAGTTAAAAATGCGACTGAAAAGCTTCACAATCTGCTTATCG +
Preference number: 6 (lower is better)
Translates to: PVPLTCSRSRAISSG*QLKMRLKSFTICLS
Trigger: CGATAAGCAGATTGTGAAGCTTTTCAGTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGACCTAGAGCAGGTCAGAGGAACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586435.1
CDS CAA 90 bp ACCTTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTTGCCTGTCTaGTTGTCAATCAGAAGCACTTCAGAATCCAAGATCATGCTGTGG +
Preference number: 6 (lower is better)
Translates to: TLCTPRVPKGSGLPV*LSIRSTSESKIMLW
Trigger: CCACAGCATGATCTTGGATTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588713.1
CDS TCA 72 bp ACCCGGGTTATCATGTCAGCCAAGTCCAAAGCTTTCTaGGGGACAAGAGAGATGTGTGACTCGCTTCATTTC +
Preference number: 6 (lower is better)
Translates to: TRVIMSAKSKAF*GTREMCDSLHF
Trigger: GAAATGAAGCGAGTCACACATCTCTCTTGTCCCTCAGAAAGCTTTGGACTTGGCTGACATGATAACCCGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585370.1
CDS GCA 72 bp TTATTCTTCCAGTCGCAGTTGACCCAAGGAGTTCTCTaGCCTGCTTTCAAACTTCTAGGACACTGCCTAGCA +
Preference number: 6 (lower is better)
Translates to: LFFQSQLTQGVL*PAFKLLGHCLA
Trigger: TGCTAGGCAGTGTCCTAGAAGTTTGAAAGCAGGGCAGAGAACTCCTTGGGTCAACTGCGACTGGAAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 72 bp CCTTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTTaGCTGTCTTGTTGTCAATCAGAAGCACTTCAGAAT +
Preference number: 6 (lower is better)
Translates to: PCVLPESQRAVV*LSCCQSEALQN
Trigger: ATTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588713.1
CDS CAA 72 bp ACTCCCAGAGTCCCAAAGGGCAGTGGTTTGCCTGTCTaGTTGTCAATCAGAAGCACTTCAGAATCCAAGATC +
Preference number: 6 (lower is better)
Translates to: TPRVPKGSGLPV*LSIRSTSESKI
Trigger: GATCTTGGATTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586058.1
ENST00000588713.1
ENST00000590630.5
CDS CAA 72 bp ACCTTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTaGCCTGTCTTGTTGTCAATCAGAAGCACTTCAGAA +
Preference number: 6 (lower is better)
Translates to: TLCTPRVPKGSG*PVLLSIRSTSE
Trigger: TTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588713.1
CDS CAA 90 bp TCTGACACGTCACCCTGCTCTAGGTCCCGTGCCATATCATCTGGGTaGCAGTTAAAAATGCGACTGAAAAGCTTCACAATCTGCTTATCG +
Preference number: 6 (lower is better)
Translates to: SDTSPCSRSRAISSG*QLKMRLKSFTICLS
Trigger: CGATAAGCAGATTGTGAAGCTTTTCAGTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGACCTAGAGCAGGGTGACGTGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
CDS CAA 90 bp TTCTTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTTGCCTGTCTaGTTGTCAATCAGAAGCACTTCAGAATCCAAGATCATGCTGTGG +
Preference number: 6 (lower is better)
Translates to: FLCTPRVPKGSGLPV*LSIRSTSESKIMLW
Trigger: CCACAGCATGATCTTGGATTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586058.1
ENST00000590630.5
CDS CAA 90 bp AAGGCTGCTTTCTTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTaGCCTGTCTTGTTGTCAATCAGAAGCACTTCAGAATCCAAGATC +
Preference number: 6 (lower is better)
Translates to: KAAFLCTPRVPKGSG*PVLLSIRSTSESKI
Trigger: GATCTTGGATTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGAAAGCAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586058.1
ENST00000590630.5
CDS CAA 90 bp TCTTTCATATCACCCCCAGACTCTGAGAAGGGATTGGGCACCACTTaGCCAATTCGGCATACGCCCTTCACAATCTTTTCCTTGCATTTT +
Preference number: 6 (lower is better)
Translates to: SFISPPDSEKGLGTT*PIRHTPFTIFSLHF
Trigger: AAAATGCAAGGAAAAGATTGTGAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
ENST00000592690.1
CDS TCA 72 bp TCTGACCACTGGCTGAATTGTCTTACATCACGCCAGTaGTGTTTTCGGAATAGGCACAGTTCTTTTCGGCTG +
Preference number: 6 (lower is better)
Translates to: SDHWLNCLTSRQ*CFRNRHSSFRL
Trigger: CAGCCGAAAAGAACTGTGCCTATTCCGAAAACATCACTGGCGTGATGTAAGACAATTCAGCCAGTGGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
CDS TCA 72 bp AACATGATCCGGTTTGGAATTTCAACCATGTTGTCATaGAGAAACTTCCGCCGCTCACACAGAGGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: NMIRFGISTMLS*RNFRRSHRGLS
Trigger: GGACAGACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGAAATTCCAAACCGGATCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586058.1
ENST00000590630.5
CDS TCA 72 bp AACATGATCCGGTTTGGAATTTCAACCATGTTGTCATaGAGAAACTTCCGCCGCTCACACAGAGGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: NMIRFGISTMLS*RNFRRSHRGLR
Trigger: CCTCAGACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGAAATTCCAAACCGGATCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586119.1
ENST00000593099.5
CDS TCA 72 bp TACCTAGGAAGGATTTCCATGCCCTACCCTTCTGGGTaGAGACTAGCAGGCAACATATGCAATAGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: YLGRISMPYPSG*RLAGNICNSQR
Trigger: CCTTTGACTATTGCATATGTTGCCTGCTAGTCTTCACCCAGAAGGGTAGGGCATGGAAATCCTTCCTAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 72 bp TCTATCTGTCCTTTGAGGCATCAGCTCCCCCAGAGTTaGGCCAGTACTAAACCTAGTTCTTGGCATCAGAAA +
Preference number: 6 (lower is better)
Translates to: SICPLRHQLPQS*ASTKPSSWHQK
Trigger: TTTCTGATGCCAAGAACTAGGTTTAGTACTGGCTCAACTCTGGGGGAGCTGATGCCTCAAAGGACAGATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 72 bp TCTTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTTaGCTGTCTTGTTGTCAATCAGAAGCACTTCAGAAT +
Preference number: 6 (lower is better)
Translates to: SCVLPESQRAVV*LSCCQSEALQN
Trigger: ATTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586058.1
ENST00000590630.5
CDS CCA 72 bp TTCAAACTTCTTGTACAGAAGGTTGGGAACACAACCTaGGCTAAACTGGCCCACGTGGTGTGTTGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: FKLLVQKVGNTT*AKLAHVVCCCF
Trigger: AAAACAGCAACACACCACGTGGGCCAGTTTAGCCCAGGTTGTGTTCCCAACCTTCTGTACAAGAAGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 72 bp TCACCCTGCTCTAGGTCCCGTGCCATATCATCTGGGTaGCAGTTAAAAATGCGACTGAAAAGCTTCACAATC +
Preference number: 6 (lower is better)
Translates to: SPCSRSRAISSG*QLKMRLKSFTI
Trigger: GATTGTGAAGCTTTTCAGTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGACCTAGAGCAGGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
CDS CAA 72 bp TTCTTGTGTACTCCCAGAGTCCCAAAGGGCAGTGGTTaGCCTGTCTTGTTGTCAATCAGAAGCACTTCAGAA +
Preference number: 6 (lower is better)
Translates to: FLCTPRVPKGSG*PVLLSIRSTSE
Trigger: TTCTGAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000586058.1
ENST00000590630.5
CDS CAA 72 bp TTGGGTCCTGGCCGTCAGAGTGCCAGAGTTTACCTCTaGGAGCTACCTCTTACTAACTGTGTAATTTTAACC +
Preference number: 6 (lower is better)
Translates to: LGPGRQSARVYL*ELPLTNCVILT
Trigger: GGTTAAAATTACACAGTTAGTAAGAGGTAGCTCCAAGAGGTAAACTCTGGCACTCTGACGGCCAGGACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 72 bp CTGACCTGCTCTAGGTCCCGTGCCATATCATCTGGGTaGCAGTTAAAAATGCGACTGAAAAGCTTCACAATC +
Preference number: 6 (lower is better)
Translates to: LTCSRSRAISSG*QLKMRLKSFTI
Trigger: GATTGTGAAGCTTTTCAGTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGACCTAGAGCAGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586435.1
CDS CAA 90 bp AAGTGGTCTCCATTCTTATGCACCTGGACTCGCTCTCCATCGTACTaGATCTCAGAGAACATGCCATTGGGACATTTCTTCATTGCATAC +
Preference number: 6 (lower is better)
Translates to: KWSPFLCTWTRSPSY*ISENMPLGHFFIAY
Trigger: GTATGCAATGAAGAAATGTCCCAATGGCATGTTCTCTGAGATCAAGTACGATGGAGAGCGAGTCCAGGTGCATAAGAATGGAGACCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000586058.1
ENST00000588713.1
ENST00000590630.5
CDS CAA 90 bp CCTGTTGGGCTCTGGGGCATTGAACTGTGTTGGACACATGATAGATaGCTTAAAAGTATTAGTTCCTCAGACTCCAGCTTCCTTTCCAGT +
Preference number: 6 (lower is better)
Translates to: PVGLWGIELCWTHDR*LKSISSSDSSFLSS
Trigger: ACTGGAAAGGAAGCTGGAGTCTGAGGAACTAATACTTTTAAGCAATCTATCATGTGTCCAACACAGTTCAATGCCCCAGAGCCCAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS TCA 72 bp GATGTCCATGAAGCAGATCTGTTTCTGACCACTGGCTaGATTGTCTTACATCACGCCAGTGATGTTTTCGGA +
Preference number: 6 (lower is better)
Translates to: DVHEADLFLTTG*IVLHHASDVFG
Trigger: TCCGAAAACATCACTGGCGTGATGTAAGACAATTCAGCCAGTGGTCAGAAACAGATCTGCTTCATGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585941.5
ENST00000590181.5
CDS CAA 72 bp GGGATAATCACACCCAACCTGTTGGGCTCTGGGGCATaGAACTGTGTTGGACACATGATAGATTGCTTAAAA +
Preference number: 6 (lower is better)
Translates to: GIITPNLLGSGA*NCVGHMIDCLK
Trigger: TTTTAAGCAATCTATCATGTGTCCAACACAGTTCAATGCCCCAGAGCCCAACAGGTTGGGTGTGATTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 72 bp CAGGGAAGAGGTTTAGCCGATGTTCCCCAAACACCTTaGCTCATCCTCTTTCAAACTTCTTGTACAGAAGGT +
Preference number: 6 (lower is better)
Translates to: QGRGLADVPQTP*LILFQTSCTEG
Trigger: ACCTTCTGTACAAGAAGTTTGAAAGAGGATGAGCAAAGGTGTTTGGGGAACATCGGCTAAACCTCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592244.1
ENST00000593099.5
CDS TCA 72 bp AAAGAATTGCTCAGGAGATGTTGCCAAACCCAAGACTaGCAAGAAAATGTAACAGGGAAAAGGCTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: KELLRRCCQTQD*QENVTGKRLLR
Trigger: CCTGAGGAGCCTTTTCCCTGTTACATTTTCTTGTCAGTCTTGGGTTTGGCAACATCTCCTGAGCAATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CCA 72 bp ACCCAACCTGTTGGGCTCTGGGGCATTGAACTGTGTTaGACACATGATAGATTGCTTAAAAGTATTAGTTCC +
Preference number: 6 (lower is better)
Translates to: TQPVGLWGIELC*THDRLLKSISS
Trigger: GGAACTAATACTTTTAAGCAATCTATCATGTGTCCAACACAGTTCAATGCCCCAGAGCCCAACAGGTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 72 bp TCTGGGGCATTGAACTGTGTTGGACACATGATAGATTaGTTAAAAGTATTAGTTCCTCAGACTCCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SGALNCVGHMID*LKVLVPQTPAS
Trigger: GGAAGCTGGAGTCTGAGGAACTAATACTTTTAAGCAATCTATCATGTGTCCAACACAGTTCAATGCCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS GCA 72 bp ATAGCCTCACATTCAGCTCCCCCTATAACGGAAGCTTaGTCAAATGGGTTTCAGTTTCCTAAAACAGTATGT +
Preference number: 6 (lower is better)
Translates to: IASHSAPPITEA*SNGFQFPKTVC
Trigger: ACATACTGTTTTAGGAAACTGAAACCCATTTGAGCAAGCTTCCGTTATAGGGGGAGCTGAATGTGAGGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586435.1
CDS CAA 72 bp CTCTGGGGCATTGAACTGTGTTGGACACATGATAGATaGCTTAAAAGTATTAGTTCCTCAGACTCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LWGIELCWTHDR*LKSISSSDSSF
Trigger: GAAGCTGGAGTCTGAGGAACTAATACTTTTAAGCAATCTATCATGTGTCCAACACAGTTCAATGCCCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 90 bp GCGTCTAACACATGTTTTGCACCTGAGTTCATCTTCAGATCATGTTaGATCAACCTGATGATGCATTTAAGGTCATTGGCTGTACACCTG +
Preference number: 6 (lower is better)
Translates to: ASNTCFAPEFIFRSC*INLMMHLRSLAVHL
Trigger: CAGGTGTACAGCCAATGACCTTAAATGCATCATCAGGTTGATCAAACATGATCTGAAGATGAACTCAGGTGCAAAACATGTGTTAGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5
CDS CCA 72 bp AATGATAAAACTGCTACTTCAAGAAAGGGTTTGCCATaGATCAAAGACCTCATGTGTAACAGTTCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: NDKTATSRKGLP*IKDLMCNSSAV
Trigger: GACAGCAGAACTGTTACACATGAGGTCTTTGATCCATGGCAAACCCTTTCTTGAAGTAGCAGTTTTATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593099.5
CDS CAA 72 bp ACATGTTTTGCACCTGAGTTCATCTTCAGATCATGTTaGATCAACCTGATGATGCATTTAAGGTCATTGGCT +
Preference number: 6 (lower is better)
Translates to: TCFAPEFIFRSC*INLMMHLRSLA
Trigger: AGCCAATGACCTTAAATGCATCATCAGGTTGATCAAACATGATCTGAAGATGAACTCAGGTGCAAAACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262327.9
ENST00000378526.9
ENST00000585740.5
ENST00000585941.5
ENST00000590630.5