RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LIG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105486

Ensembl transcript IDs: ENST00000263274.12, ENST00000427526.6, ENST00000536218.5, ENST00000542460.5, ENST00000593425.5, ENST00000594067.5, ENST00000594759.5, ENST00000595758.5, ENST00000596104.5, ENST00000596332.1, ENST00000596457.1, ENST00000596549.5, ENST00000596672.5, ENST00000597146.1, ENST00000597901.1, ENST00000599165.5, ENST00000599322.5, ENST00000600055.1, ENST00000601091.5, ENST00000613670.4

Found 1067 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTGAGGCTCACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTaGCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAA +
Preference number: 1 (lower is better)
Translates to: REAHCLGEGSQHRLL*QPKAQPSAQGPSDE
Trigger: TTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTGAGCCTCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
3UTR CCA 90 bp TGGGAGAGAGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTaGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCA +
Preference number: 1 (lower is better)
Translates to: WERGRGQRTSPPTQR*GPASGRESQRHLSA
Trigger: TGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCTCTCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR CCA 90 bp AGATGCCCTTGTCACTATCCACCAGGCCCCGCGCAGCAGGGTAGATaGGAGAGAGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGC +
Preference number: 1 (lower is better)
Translates to: RCPCHYPPGPAQQGR*ERGRGQRTSPPTQR
Trigger: GCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCTCTCTCCCATCTACCCTGCTGCGCGGGGCCTGGTGGATAGTGACAAGGGCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR GCA 90 bp AAGACAAACTCGCCCTCTGTCTCCACAAAGTTCTCCCGGAGCAGCTaGCGGCGCCGGGAAAGGGGCTCACGTACCAGGGACTCTCCATTG +
Preference number: 1 (lower is better)
Translates to: KTNSPSVSTKFSRSS*RRRERGSRTRDSPL
Trigger: CAATGGAGAGTCCCTGGTACGTGAGCCCCTTTCCCGGCGCCGGCAGCTGCTCCGGGAGAACTTTGTGGAGACAGAGGGCGAGTTTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR GCA 90 bp AGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGTCCAACCCCCTTTaGTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGGA +
Preference number: 1 (lower is better)
Translates to: RRCSLAEADSGSNPL*SSLVRGAGMAMRAG
Trigger: TCCAGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGACCCTGAGTCAGCCTCAGCCAGTGAACACCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR CCA 90 bp GCATCCACCTCCTTGCGTTTGCGGGTGGTGAGCACTTGGAATGGCTaGATCTGCTTCTTTTCCCGGTCCCAAGCCACGGCTTCGGTGTCC +
Preference number: 1 (lower is better)
Translates to: ASTSLRLRVVSTWNG*ICFFSRSQATASVS
Trigger: GGACACCGAAGCCGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR TCA 90 bp GGGATGCGGCTGATGATGTCCGGGTACTTCCCAGTGTTGTCTTCCTaGTTCCTGCTGAAGATCTTCACCTCCCCGCCTTCCAGGGCGTGG +
Preference number: 1 (lower is better)
Translates to: GMRLMMSGYFPVLSS*FLLKIFTSPPSRAW
Trigger: CCACGCCCTGGAAGGCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAGACAACACTGGGAAGTACCCGGACATCATCAGCCGCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR GCA 90 bp ACCTCCTTGCGTTTGCGGGTGGTGAGCACTTGGAATGGCTGGATCTaGTTCTTTTCCCGGTCCCAAGCCACGGCTTCGGTGTCCAGGATG +
Preference number: 1 (lower is better)
Translates to: TSLRLRVVSTWNGWI*FFSRSQATASVSRM
Trigger: CATCCTGGACACCGAAGCCGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR GCA 90 bp CCCTCGCAGGAGTCTTTCACTGACTGCTCCAGGAACTCGGCGATCTaGTCGATGTCCTTGGTGTCCAGGGAGGTGGCGAAGACAAACTCG +
Preference number: 1 (lower is better)
Translates to: PSQESFTDCSRNSAI*SMSLVSREVAKTNS
Trigger: CGAGTTTGTCTTCGCCACCTCCCTGGACACCAAGGACATCGAGCAGATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 90 bp AGACGCATCCACCTCCTTGCGTTTGCGGGTGGTGAGCACTTGGAATaGCTGGATCTGCTTCTTTTCCCGGTCCCAAGCCACGGCTTCGGT +
Preference number: 1 (lower is better)
Translates to: RRIHLLAFAGGEHLE*LDLLLFPVPSHGFG
Trigger: ACCGAAGCCGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 90 bp CCAGGAACTCGGCGATCTGCTCGATGTCCTTGGTGTCCAGGGAGGTaGCGAAGACAAACTCGCCCTCTGTCTCCACAAAGTTCTCCCGGA +
Preference number: 1 (lower is better)
Translates to: PGTRRSARCPWCPGR*RRQTRPLSPQSSPG
Trigger: TCCGGGAGAACTTTGTGGAGACAGAGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCAAGGACATCGAGCAGATCGCCGAGTTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR GCA 90 bp TTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGGAACTCCTaGAGCCACATTGTGATGATGAGGCCAGAGGCACATGGCAGAAAA +
Preference number: 1 (lower is better)
Translates to: FPGAWSRHGHEGWNS*SHIVMMRPEAHGRK
Trigger: TTTTCTGCCATGTGCCTCTGGCCTCATCATCACAATGTGGCTGCAGGAGTTCCAGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR CCA 90 bp ATCTCAGACGCATCCACCTCCTTGCGTTTGCGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTCTTTTCCCGGTCCCAAGCCACGGCT +
Preference number: 1 (lower is better)
Translates to: ISDASTSLRLRVVST*NGWICFFSRSQATA
Trigger: AGCCGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTCTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 90 bp CTTTCACTGACTGCTCCAGGAACTCGGCGATCTGCTCGATGTCCTTaGTGTCCAGGGAGGTGGCGAAGACAAACTCGCCCTCTGTCTCCA +
Preference number: 1 (lower is better)
Translates to: LSLTAPGTRRSARCP*CPGRWRRQTRPLSP
Trigger: TGGAGACAGAGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCAAGGACATCGAGCAGATCGCCGAGTTCCTGGAGCAGTCAGTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 90 bp CACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATaGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTG +
Preference number: 1 (lower is better)
Translates to: HTATGSWFRTQHYVL*GTALENSCAGIQVL
Trigger: CAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR GCA 90 bp GCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCATATTaGTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGT +
Preference number: 1 (lower is better)
Translates to: ALENSCAGIQVLLPY*LRAYTTLKTKYFQG
Trigger: ACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp CACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGG +
Preference number: 2 (lower is better)
Translates to: HCLGEGSQHRLLCQPKAQNRASE*RQATKR
Trigger: CCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTT...CTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
3UTR-3UTR CCA 90 bp GACGCATCCACCTCCTTGCGTTTGCGGGTGGTGAGCACTTGGAATGGCTGGATCCCGCCTTCCAGGGCGTaGATCTGTGCCCTCTGCCCG +
Preference number: 2 (lower is better)
Translates to: DASTSLRLRVVSTWNGWIPPSRA*ICALCP
Trigger: CGGGCAGAGGGCACAGATCCACGCCCTGGAAGGCGG...GATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR CCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCCCTTTGCTCTTCCCTaGTGCGTGGAGCAGGCATGG +
Preference number: 2 (lower is better)
Translates to: SPPTQRWGPASGRESQRHPFALP*CVEQAW
Trigger: CCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGG...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTTTTGCTCTTCCCTGGTaGGTGGAGCAGGCATGGCCA +
Preference number: 2 (lower is better)
Translates to: QRWGPASGRESQRHLSARFALPW*VEQAWP
Trigger: TGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAA...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGACAGCCACGGGGAGCTaGTTCAGGACACAGCACTAT +
Preference number: 2 (lower is better)
Translates to: RERSAHFTSHTALGSSQWTATGS*FRTQHY
Trigger: ATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGT...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp GGCGCCGATCACCACCAGGTCCAGGGTGTCACCCACGCCATCAAGGTAGTCCTTGCAGGAGTCTTTCACTaGCTGCTCCAGGAACTCGGC +
Preference number: 2 (lower is better)
Translates to: GADHHQVQGVTHAIKVVLAGVFH*LLQELG
Trigger: GCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGC...AAGGACTACCTTGATGGCGTGGGTGACACCCTGGACCTGGTGGTGATCGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR TCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTGCAGCACCAGCGCCTTaGGGCTCTGGTGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGAAPAP*GSGDAP
Trigger: AGGAGCATCACCAGAGCCTCAAGGCGCTGGTGCTGC...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGCAGAAGGTGTTCACTaGCTGAGGCTGACTCAGGGT +
Preference number: 2 (lower is better)
Translates to: QRWGPASGRESQRHLSARAEGVH*LRLTQG
Trigger: ACCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp CGCCGATCACCACCAGGTCCAGGGTGTCACCCACGCCATCAAGGTAGTCCTTCTTGCGTTTGCGGGTGGTaGGCACTTGGAATGGCTGGA +
Preference number: 2 (lower is better)
Translates to: RRSPPGPGCHPRHQGSPSCVCGW*ALGMAG
Trigger: TCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCA...AGAAGGACTACCTTGATGGCGTGGGTGACACCCTGGACCTGGTGGTGATCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR TCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGCCTTGAGGCTCTGGTaGTGCTCCTCCAGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: ALVVACSGCLSSRTRINRALRLW*CSSSSS
Trigger: TGAGGAGCTGGAGGAGCATCACCAGAGCCTCAAGGC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGGGTCCAACCCCCTTTaGTCTTCCCTGGTGCGTGGA +
Preference number: 2 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQGSNPL*SSLVRG
Trigger: TCCACGCACCAGGGAAGAGCAAAGGGGGTTGGACCC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGGACACAGCACTATGTaGTATGGGGCACAGCACTTG +
Preference number: 2 (lower is better)
Translates to: QRWGPASGRESQRHLSARGHSTM*YGAQHL
Trigger: CAAGTGCTGTGCCCCATAGCACATAGTGCTGTGTCC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGCTAGGGGTGAGCCATaGAGCAAAGTGATGAGCAAC +
Preference number: 2 (lower is better)
Translates to: QRWGPASGRESQRHLSARARGEP*SKVMSN
Trigger: GTTGCTCATCACTTTGCTCCATGGCTCACCCCTAGC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR CAA 90 bp GATCTCAGACGCATCCACCTCCTTGCGTTTGCGGGTGGTGAGCACTaGGAATGGCTGGATCTGCTTCTTTTCCCGGTCCCAAGCCACGGC +
Preference number: 2 (lower is better)
Translates to: DLRRIHLLAFAGGEH*EWLDLLLFPVPSHG
Trigger: GCCGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTCTGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR TCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGAAAGAAATGACGGGATaGATCCCAGACTCCGGAGTA +
Preference number: 2 (lower is better)
Translates to: RERSAHFTSHTALGSSQWKEMTG*IPDSGV
Trigger: TACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTT...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594759.5
3UTR-3UTR GCA 90 bp GTAGGCGCCGATCACCACCAGGTCCAGGGTGTCACCCACGCCATCAAGGTAGTCGCGTACAAACACACCTaGACCTGGATCTCAGACGCA +
Preference number: 2 (lower is better)
Translates to: VGADHHQVQGVTHAIKVVAYKHT*TWISDA
Trigger: TGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTACGC...GACTACCTTGATGGCGTGGGTGACACCCTGGACCTGGTGGTGATCGGCGCCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR GCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTCTAATGGCATCAGACTaGCCCCTCCACACTTCTCAT +
Preference number: 2 (lower is better)
Translates to: QRWGPASGRESQRHLSARLMASD*PLHTSH
Trigger: ATGAGAAGTGTGGAGGGGGCAGTCTGATGCCATTAG...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGATTTGCTCTTCCCTGGTaGGTGGAGCAGGCATGGCCA +
Preference number: 2 (lower is better)
Translates to: ALVVACSGCLSSRTRINRFALPW*VEQAWP
Trigger: TGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAA...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR CAA 90 bp TCTTTCACTGACTGCTCCAGGAACTCGGCGATCTGCTCGATGTCCTaGGTGTCCAGGGAGGTGGCGAAGACAAACTCGCCCTCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: SFTDCSRNSAICSMS*VSREVAKTNSPSVS
Trigger: GGAGACAGAGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCAAGGACATCGAGCAGATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR TCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGACTGACACACATTCCTaGCATCTTTCTATCCCAGCC +
Preference number: 2 (lower is better)
Translates to: RTSPPTQRWGPASGRESQTDTHS*HLSIPA
Trigger: GGCTGGGATAGAAAGATGTCAGGAATGTGTGTCAGT...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTCCTCGGTCTGGGTTGTaGAATAGGAAATACCCCCGG +
Preference number: 2 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGPRSGL*NRKYPR
Trigger: CCGGGGGTATTTCCTATTGCACAACCCAGACCGAGG...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGCCTCGGTCTGGGTTGTaGAATAGGAAATACCCCCGG +
Preference number: 2 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQPRSGL*NRKYPR
Trigger: CCGGGGGTATTTCCTATTGCACAACCCAGACCGAGG...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGCAGAAGGTGTTCACTaGCTGAGGCTGACTCAGGGT +
Preference number: 2 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQAEGVH*LRLTQG
Trigger: ACCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAACAGCCACGGGGAGCTaGTTCAGGACACAGCACTAT +
Preference number: 2 (lower is better)
Translates to: ALVVACSGCLSSRTRINRTATGS*FRTQHY
Trigger: ATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGT...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCCTTCACAGGGGGATGTaGGCACCCCTCGGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSLHRGM*APLGLG
Trigger: ACCCAGACCGAGGGGTGCTCACATCCCCCTGTGAAG...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGGGAGAGGAGGAACCTaGATCCCTAATGGCATCAGA +
Preference number: 2 (lower is better)
Translates to: ALVVACSGCLSSRTRINRGRGGT*IPNGIR
Trigger: TCTGATGCCATTAGGGATTCAGGTTCCTCCTCTCCC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp CATCCAGGGTCTTCACCATCAGCCCCTCGCAGGAGTCTTTCACTGACTGCTCCACGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTC +
Preference number: 2 (lower is better)
Translates to: HPGSSPSAPRRSLSLTAPRVVST*NGWICF
Trigger: GAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCG...TGGAGCAGTCAGTGAAAGACTCCTGCGAGGGGCTGATGGTGAAGACCCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCACTCTTCCCTGGTGCGTaGAGCAGGCATGGCCATGAG +
Preference number: 2 (lower is better)
Translates to: LWGTALENSCAGIQVLLPLFPGA*SRHGHE
Trigger: CTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAG...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGCTAGGGGTGAGCCATaGAGCAAAGTGATGAGCAAC +
Preference number: 2 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQARGEP*SKVMSN
Trigger: GTTGCTCATCACTTTGCTCCATGGCTCACCCCTAGC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCGCCTTGAGGCTCTGGTaGTGCTCCTCCAGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSALRLW*CSSSSS
Trigger: TGAGGAGCTGGAGGAGCATCACCAGAGCCTCAAGGC...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp TACAAACACACCTGCACCTGGATCTCAGACGCATCCACCTCCTTGCGTTTGCGGCAGGGCGTGGATCTGTaGCCTCTGCCCGTCATATTT +
Preference number: 2 (lower is better)
Translates to: YKHTCTWISDASTSLRLRQGVDL*PLPVIF
Trigger: AAATATGACGGGCAGAGGGCACAGATCCACGCCCTG...CCGCAAACGCAAGGAGGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR GCA 90 bp AGGGAGGTGGCGAAGACAAACTCGCCCTCTGTCTCCACAAAGTTCTCCCGGAGCTGGAATGGCTGGATCTaGTTCTTTTCCCGGTCCCAA +
Preference number: 2 (lower is better)
Translates to: REVAKTNSPSVSTKFSRSWNGWI*FFSRSQ
Trigger: TTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCA...GCTCCGGGAGAACTTTGTGGAGACAGAGGGCGAGTTTGTCTTCGCCACCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGTCCTGTTGCCATATTaGTTAAGGGCATATACAACA +
Preference number: 2 (lower is better)
Translates to: RERSAHFTSHTALGSSQWVLLPY*LRAYTT
Trigger: TGTTGTATATGCCCTTAAGCAATATGGCAACAGGAC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp GGTGGCATCAACATCCAGGGTCTTCACCATCAGCCCCTCGCAGGAGTCTTTCACAAACACACCTGCACCTaGATCTCAGACGCATCCACC +
Preference number: 2 (lower is better)
Translates to: GGINIQGLHHQPLAGVFHKHTCT*ISDAST
Trigger: GGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTT...GTGAAAGACTCCTGCGAGGGGCTGATGGTGAAGACCCTGGATGTTGATGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR CCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCCCCTTTGCTCTTCCCTaGTGCGTGGAGCAGGCATGG +
Preference number: 2 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSPFALP*CVEQAW
Trigger: CCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGG...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGATGAGCAACAGAACTTaGGCAGAAGGTGTTCACTGG +
Preference number: 2 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQMSNRT*AEGVHW
Trigger: CCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCAT...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGACAGCACTATGTGCTATaGGGCACAGCACTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: ALVVACSGCLSSRTRINRQHYVL*GTALEN
Trigger: GTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTG...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp CATCCAGGGTCTTCACCATCAGCCCCTCGCAGGAGTCTTTCACTGACTGCTCCACCAGTGTTGTCTTCCTaGTTCCTGCTGAAGATCTTC +
Preference number: 2 (lower is better)
Translates to: HPGSSPSAPRRSLSLTAPPVLSS*FLLKIF
Trigger: GAAGATCTTCAGCAGGAATCAGGAAGACAACACTGG...TGGAGCAGTCAGTGAAAGACTCCTGCGAGGGGCTGATGGTGAAGACCCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CAA 90 bp GGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGCACTaGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCATATTGCT +
Preference number: 2 (lower is better)
Translates to: GAGSGHSTMCYGAQH*KTLVRAFRSCCHIA
Trigger: AGCAATATGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGATCTCAATCTCTCACTaGCACACATTCCTGACATCT +
Preference number: 2 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQISISH*HTFLTS
Trigger: AGATGTCAGGAATGTGTGTCAGTGAGAGATTGAGAT...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTAATTCTTTTCTTATGTaGGCCACCACTATTTGTAGC +
Preference number: 2 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRANSFLM*ATTICS
Trigger: GCTACAAATAGTGGTGGCTCACATAAGAAAAGAATT...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGGGCATATACAACACTaGAAACAAAGTACTTCCAGG +
Preference number: 2 (lower is better)
Translates to: ALVVACSGCLSSRTRINRGHIQH*KQSTSR
Trigger: CCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCTAATGGCATCAGACTaGCCCCTCCACACTTCTCAT +
Preference number: 2 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGLMASD*PLHTSH
Trigger: ATGAGAAGTGTGGAGGGGGCAGTCTGATGCCATTAG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGACTGACACACATTCCTaGCATCTTTCTATCCCAGCC +
Preference number: 2 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGTDTHS*HLSIPA
Trigger: GGCTGGGATAGAAAGATGTCAGGAATGTGTGTCAGT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTCAAAATCCACAGCCTaGCACAGCAGATTTGCTAAA +
Preference number: 2 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTSKSTA*HSRFAK
Trigger: TTTAGCAAATCTGCTGTGGCAGGCTGTGGATTTTGA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
3UTR-3UTR TCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGATGGTACGATTCTAGGTaGTATTTTGTTCTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: ALVVACSGCLSSRTRINRWYDSR*YFVLFL
Trigger: CAGAAACAGAACAAAATATCACCTAGAATCGTACCA...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CCA 90 bp TGTGCGATCTCTTGGCGATCTCGTAGGTGGCATCAACATCCAGGGTCTTCACCAGAAGGATGTGACCGATaGGAGTTTAATCTTGGGGAT +
Preference number: 2 (lower is better)
Translates to: CAISWRSRRWHQHPGSSPEGCDR*EFNLGD
Trigger: ATCCCCAAGATTAAACTCCCATCGGTCACATCCTTC...TGGTGAAGACCCTGGATGTTGATGCCACCTACGAGATCGCCAAGAGATCGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR CCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTAAGACCCAAATTTGTTaGAGAGGGGAATATAGGAAA +
Preference number: 2 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGKTQIC*RGEYRK
Trigger: TTTCCTATATTCCCCTCTCCAACAAATTTGGGTCTT...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGTCAAAATCCACAGCCTaGCACAGCAGATTTGCTAAA +
Preference number: 2 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGSKSTA*HSRFAK
Trigger: TTTAGCAAATCTGCTGTGGCAGGCTGTGGATTTTGA...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp AGTTTAATCTTGGGGATGCGGCTGATGATGTCCGGGTACTTCCCAGTGTTGTCTTGGATCTGTGCCCTCTaGCCGTCATATTTGTATTCG +
Preference number: 2 (lower is better)
Translates to: SLILGMRLMMSGYFPVLSWICAL*PSYLYS
Trigger: CGAATACAAATATGACGGGCAGAGGGCACAGATCCA...AGACAACACTGGGAAGTACCCGGACATCATCAGCCGCATCCCCAAGATTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR TCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCATCTCAATCTCTCACTaGCACACATTCCTGACATCT +
Preference number: 2 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSISISH*HTFLTS
Trigger: AGATGTCAGGAATGTGTGTCAGTGAGAGATTGAGAT...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTATCTCAATCTCTCACTaGCACACATTCCTGACATCT +
Preference number: 2 (lower is better)
Translates to: TQHYVLWGTALENSCAGIISISH*HTFLTS
Trigger: AGATGTCAGGAATGTGTGTCAGTGAGAGATTGAGAT...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGAATTCTTTTCTTATGTaGGCCACCACTATTTGTAGC +
Preference number: 2 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGNSFLM*ATTICS
Trigger: GCTACAAATAGTGGTGGCTCACATAAGAAAAGAATT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCGTCCTGTTGCCATATTaGTTAAGGGCATATACAACA +
Preference number: 2 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSVLLPY*LRAYTT
Trigger: TGTTGTATATGCCCTTAAGCAATATGGCAACAGGAC...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTCAAAATCCACAGCCTaGCACAGCAGATTTGCTAAA +
Preference number: 2 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSKSTA*HSRFAK
Trigger: TTTAGCAAATCTGCTGTGGCAGGCTGTGGATTTTGA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
3UTR-3UTR CCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTAAGACCCAAATTTGTTaGAGAGGGGAATATAGGAAA +
Preference number: 2 (lower is better)
Translates to: TQHYVLWGTALENSCAGIKTQIC*RGEYRK
Trigger: TTTCCTATATTCCCCTCTCCAACAAATTTGGGTCTT...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR GCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCTCAAATGTCACTACTaGGTGTCTCTGGGTGGTACG +
Preference number: 2 (lower is better)
Translates to: GPVAILLKGIYNTENKVLLKCHY*VSLGGT
Trigger: CGTACCACCCAGAGACACGCAGTAGTGACATTTGAG...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAATGAGCAACAGAACTTaGGCAGAAGGTGTTCACTGG +
Preference number: 2 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKMSNRT*AEGVHW
Trigger: CCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCAT...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR TCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTTGGTACGATTCTAGGTaGTATTTTGTTCTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: GPVAILLKGIYNTENKVLWYDSR*YFVLFL
Trigger: CAGAAACAGAACAAAATATCACCTAGAATCGTACCA...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR GCA 72 bp CACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTaGCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCT +
Preference number: 3 (lower is better)
Translates to: HCLGEGSQHRLL*QPKAQPSAQGP
Trigger: AGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
3UTR GCA 72 bp AGGCTCACTGCCTGGGAGAGGGCAGCCAGCACCGACTaGTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGG +
Preference number: 3 (lower is better)
Translates to: RLTAWERAASTD*SASPRRSRPLR
Trigger: CCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTGAGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
3UTR GCA 72 bp TCGCCCTCTGTCTCCACAAAGTTCTCCCGGAGCAGCTaGCGGCGCCGGGAAAGGGGCTCACGTACCAGGGAC +
Preference number: 3 (lower is better)
Translates to: SPSVSTKFSRSS*RRRERGSRTRD
Trigger: GTCCCTGGTACGTGAGCCCCTTTCCCGGCGCCGGCAGCTGCTCCGGGAGAACTTTGTGGAGACAGAGGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 72 bp GGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTaGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCAT +
Preference number: 3 (lower is better)
Translates to: GRGQRTSPPTQR*GPASGRESQRH
Trigger: ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR TCA 72 bp CCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTCTaGGTGGCGGCAGGCCACAAAGAGGCCTTTGATGAT +
Preference number: 3 (lower is better)
Translates to: PSAQGPSDEPGF*VAAGHKEAFDD
Trigger: ATCATCAAAGGCCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
3UTR-3UTR CAA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGGCATTCAGGTCCTGTaGCCATATTGCTTAAGGGCA +
Preference number: 3 (lower is better)
Translates to: RERSAHFTSHTALGSSQWGIQVL*PYCLRA
Trigger: TGCCCTTAAGCAATATGGCAACAGGACCTGAATGCC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR GCA 72 bp GCGTGGAGCAGGCATGGCCATGAGGGCTGGAACTCCTaGAGCCACATTGTGATGATGAGGCCAGAGGCACAT +
Preference number: 3 (lower is better)
Translates to: AWSRHGHEGWNS*SHIVMMRPEAH
Trigger: ATGTGCCTCTGGCCTCATCATCACAATGTGGCTGCAGGAGTTCCAGCCCTCATGGCCATGCCTGCTCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR CCA 72 bp ACTGCTCCAGGAACTCGGCGATCTGCTCGATGTCCTTaGTGTCCAGGGAGGTGGCGAAGACAAACTCGCCCT +
Preference number: 3 (lower is better)
Translates to: TAPGTRRSARCP*CPGRWRRQTRP
Trigger: AGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCAAGGACATCGAGCAGATCGCCGAGTTCCTGGAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR TCA 72 bp CCGGGTACTTCCCAGTGTTGTCTTCCTGATTCCTGCTaGAGATCTTCACCTCCCCGCCTTCCAGGGCGTGGA +
Preference number: 3 (lower is better)
Translates to: PGTSQCCLPDSC*RSSPPRLPGRG
Trigger: TCCACGCCCTGGAAGGCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAGACAACACTGGGAAGTACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR GCA 72 bp GAGTCTTTCACTGACTGCTCCAGGAACTCGGCGATCTaGTCGATGTCCTTGGTGTCCAGGGAGGTGGCGAAG +
Preference number: 3 (lower is better)
Translates to: ESFTDCSRNSAI*SMSLVSREVAK
Trigger: CTTCGCCACCTCCCTGGACACCAAGGACATCGAGCAGATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 72 bp TCCTTGCGTTTGCGGGTGGTGAGCACTTGGAATGGCTaGATCTGCTTCTTTTCCCGGTCCCAAGCCACGGCT +
Preference number: 3 (lower is better)
Translates to: SLRLRVVSTWNG*ICFFSRSQATA
Trigger: AGCCGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 72 bp CACCTCCTTGCGTTTGCGGGTGGTGAGCACTTGGAATaGCTGGATCTGCTTCTTTTCCCGGTCCCAAGCCAC +
Preference number: 3 (lower is better)
Translates to: HLLAFAGGEHLE*LDLLLFPVPSH
Trigger: GTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 72 bp CGGCGATCTGCTCGATGTCCTTGGTGTCCAGGGAGGTaGCGAAGACAAACTCGCCCTCTGTCTCCACAAAGT +
Preference number: 3 (lower is better)
Translates to: RRSARCPWCPGR*RRQTRPLSPQS
Trigger: ACTTTGTGGAGACAGAGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCAAGGACATCGAGCAGATCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCCTGCCACAGCAGATTaGCTAAAAAGCAAAGGCAAT +
Preference number: 3 (lower is better)
Translates to: SPPTQRWGPASGRESQRHPATAD*LKSKGN
Trigger: ATTGCCTTTGCTTTTTAGCAAATCTGCTGTGGCAGG...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CAA 90 bp AGCCCCTCGCAGGAGTCTTTCACTGACTGCTCCAGGAACTCGGCGATCTGCTCGGATGGGAGTTTAATCTaGGGGATGCGGCTGATGATG +
Preference number: 3 (lower is better)
Translates to: SPSQESFTDCSRNSAICSDGSLI*GMRLMM
Trigger: CATCATCAGCCGCATCCCCAAGATTAAACTCCCATC...CGAGCAGATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGCGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 72 bp GCATCCACCTCCTTGCGTTTGCGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTCTTTTCCCGGTCCCAA +
Preference number: 3 (lower is better)
Translates to: ASTSLRLRVVST*NGWICFFSRSQ
Trigger: TTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR CAA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTATTTCCCAGAATTCCTaGCAGCTAGGGGTGAGCCAT +
Preference number: 3 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGISQNS*QLGVSH
Trigger: ATGGCTCACCCCTAGCTGCAAGGAATTCTGGGAAAT...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR TCA 72 bp TCTCAGACGCATCCACCTCCTTGCGTTTGCGGGTGGTaGGCACTTGGAATGGCTGGATCTGCTTCTTTTCCC +
Preference number: 3 (lower is better)
Translates to: SQTHPPPCVCGW*ALGMAGSASFP
Trigger: GGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR CCA 72 bp ACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATaGGGCACAGCACTTGAAAACTCTTGTGCGGGCATT +
Preference number: 3 (lower is better)
Translates to: TGSWFRTQHYVL*GTALENSCAGI
Trigger: AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CAA 90 bp GTACTTCCCAGTGTTGTCTTCCTGATTCCTGCTGAAGATCTTCACCTCCCCGCCCTCTGCCCGTCATATTaGTATTCGCAGGTGAAAGCT +
Preference number: 3 (lower is better)
Translates to: VLPSVVFLIPAEDLHLPALCPSY*YSQVKA
Trigger: AGCTTTCACCTGCGAATACAAATATGACGGGCAGAG...GGCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAGACAACACTGGGAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
3UTR-3UTR CAA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTATTTCCCAGAATTCCTaGCAGCTAGGGGTGAGCCAT +
Preference number: 3 (lower is better)
Translates to: TQHYVLWGTALENSCAGIISQNS*QLGVSH
Trigger: ATGGCTCACCCCTAGCTGCAAGGAATTCTGGGAAAT...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CAA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCCTGCCACAGCAGATTaGCTAAAAAGCAAAGGCAAT +
Preference number: 3 (lower is better)
Translates to: TQHYVLWGTALENSCAGIPATAD*LKSKGN
Trigger: ATTGCCTTTGCTTTTTAGCAAATCTGCTGTGGCAGG...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CAA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTGGTCCTGTTGCCATATaGCTTAAGGGCATATACAAC +
Preference number: 3 (lower is better)
Translates to: TQHYVLWGTALENSCAGIGPVAI*LKGIYN
Trigger: GTTGTATATGCCCTTAAGCAATATGGCAACAGGACC...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CAA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAACCCCTCGGTCTGGGTaGTGCAATAGGAAATACCCC +
Preference number: 3 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKTPRSG*CNRKYP
Trigger: GGGGTATTTCCTATTGCACAACCCAGACCGAGGGGT...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR GCA 72 bp AACTCTTGTGCGGGCATTCAGGTCCTGTTGCCATATTaGTTAAGGGCATATACAACACTGAAAACAAAGTAC +
Preference number: 3 (lower is better)
Translates to: NSCAGIQVLLPY*LRAYTTLKTKY
Trigger: GTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACCTGAATGCCCGCACAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR-3UTR CAA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGATGAGCAACAGAACTaGAGCAGAAGGTGTTCACTG +
Preference number: 3 (lower is better)
Translates to: GPVAILLKGIYNTENKVLDEQQN*SRRCSL
Trigger: CAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGCCTCTTCCCCTTCGCTaGCCAGGACCCGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: CLGEGSQHRLLCQPKAQPPLPLR*PGPGPP
Trigger: AGGCGGCCCGGGTCCTGGGCAGCGAAGGGGAAGAGG...CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp CTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGGGGCTTGGGAGGCGTaGTGGGCTGGTCCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LPGRGQPAPTALPAQGAAGAWEA*WAGPRL
Trigger: AAGACGGGGACCAGCCCACCACGCCTCCCAAGCCCC...GGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp CACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCAAGCTCCAGGCCCTaGTGGGGTGGCCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: HCLGEGSQHRLLCQPKAQPSSRP*WGGPRW
Trigger: CCACCTTGGGCCACCCCAGCAGGGCCTGGAGCTTGG...CTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp CACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGGCAGCCAGCACCGACTaGTCTGCCAGCCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: HCLGEGSQHRLLCQPKAQAASTD*SASPRR
Trigger: GCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGC...CTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp GAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCCGGACGGACTCCAGCTaGCGACCTTCAGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ERAASTDCSASPRRSRPLRTDSS*RPSGES
Trigger: GCTCTCCCCTGAAGGTCGGCAGCTGGAGTCCGTCCG...GAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp GAGGCTCACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGAGCTGCTCCTTGCGTTaGTCCCGCGCGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EAHCLGEGSQHRLLCQPKSCSLR*SRAPLP
Trigger: GGGCAGCGGCGCGCGGGACCAACGCAAGGAGCAGCT...CTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTGAGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp GAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCGGAGGCGTGGTGGGCTaGTCCCCGTCTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ERAASTDCSASPRRSRPLGGVVG*SPSSPS
Trigger: GGAAGGAGAAGACGGGGACCAGCCCACCACGCCTCC...GAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp TGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGGCTTGGGAGGCGTGGTaGGCTGGTCCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CLGEGSQHRLLCQPKAQPAWEAW*AGPRLL
Trigger: GAGAAGACGGGGACCAGCCCACCACGCCTCCCAAGC...CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp GAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGCTCCAGGCCCTGCTaGGGTGGCCCAAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ERAASTDCSASPRRSRPLSSRPC*GGPRWL
Trigger: CAACCACCTTGGGCCACCCCAGCAGGGCCTGGAGCT...GAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR TCA 90 bp TGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGGGCCACCTCAGGCTCTaGAACGCTTTCCGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: CLGEGSQHRLLCQPKAQPGHLRL*NAFRRG
Trigger: ACCCCGACGGAAAGCGTTTCAGAGCCTGAGGTGGCC...CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR TCA 90 bp TGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGAGGTGGTGGCAGCATaGGCCTCTGGGTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: CSASPRRSRPLRDLAMNREVVAA*ASGCCG
Trigger: GCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTC...CCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR TCA 90 bp GCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTTGGGGGTGTCGAGGGTaGCAGTTGTGGCTGCGTGTC +
Preference number: 4 (lower is better)
Translates to: AWERAASTDCSASPRRSRWGCRG*QLWLRV
Trigger: GACACGCAGCCACAACTGTCACCCTCGACACCCCCA...ACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp GAGGCTCACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGCGCCAGGCGCGCCTCTaGAGTCCCAAGTTCGCGCCA +
Preference number: 4 (lower is better)
Translates to: EAHCLGEGSQHRLLCQPKRQARL*SPKFAP
Trigger: TGGCGCGAACTTGGGACTGCAGAGGCGCGCCTGGCG...CTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTGAGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGCCTCTTCCCCTTCGCTaGCCAGGACCCGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWPLPLR*PGPGPP
Trigger: AGGCGGCCCGGGTCCTGGGCAGCGAAGGGGAAGAGG...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCGCGTCTTGGGAGCTCTaGGGGGAGGCTTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ERAASTDCSASPRRSRPLASWEL*GEAWSA
Trigger: AGCAGACCAAGCCTCCCCGCAGAGCTCCCAAGACGC...GAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp ACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGCAGCACCGACTGCTCTaGCAGCCCAAGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TDCSASPRRSRPLRDLAMQHRLL*QPKAQP
Trigger: CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTG...CATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp ACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGGGGCGTGAGGCTCACTaGCTGGGAGAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TDCSASPRRSRPLRDLAMGREAH*LGEGSQ
Trigger: CTGGCTGCCCTCTCCCAGGCAGTGAGCCTCACGCCC...CATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp TGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGGGCAGCATGAGCCTCTaGGTGCTGCGGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: CLGEGSQHRLLCQPKAQPGSMSL*VLRLFS
Trigger: CGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCC...CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR TCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGAGGTGGTGGCAGCATaGGCCTCTGGGTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWEVVAA*ASGCCG
Trigger: GCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTCTTGGCCCGGGGGCGTaGGGCTCACTGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARLGPGA*GSLPGR
Trigger: TCTCCCAGGCAGTGAGCCTCACGCCCCCGGGCCAAG...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACTGTCAGCTGCTCCTTaGGTTGGTCCCGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RLLCQPKAQPSAQGPSDELSAAP*VGPARR
Trigger: GCGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAG...TTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCCTCTTCCCCTTCGCTaGCCAGGACCCGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQPLPLR*PGPGPP
Trigger: AGGCGGCCCGGGTCCTGGGCAGCGAAGGGGAAGAGG...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTCTGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTC +
Preference number: 4 (lower is better)
Translates to: ASPRRSRPLRDLAMNRASVAFLG*LSPDGL
Trigger: GAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGAC...AGAAGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp GAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCCTTCAGTGCCGCCTTTaGAGGGGGCTCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ERAASTDCSASPRRSRPLLQCRL*RGLRLS
Trigger: AGAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAG...GAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp TCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTGGCCGCCTTCCTCCCTaGCCTCTTCACCGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: SASPRRSRPLRDLAMNRAGRLPP*PLHRRV
Trigger: GACTCTCCGGTGAAGAGGCCAGGGAGGAAGGCGGCC...AGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGGGGCTTGGGAGGCGTaGTGGGCTGGTCCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWGAWEA*WAGPRL
Trigger: AAGACGGGGACCAGCCCACCACGCCTCCCAAGCCCC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTCTGACAGGGAGGAGGTCTaGAGGCGACAGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ASPRRSRPLRDLAMNRASDREEV*RRQGHH
Trigger: GTGGTGGCCCTGTCGCCTCCAGACCTCCTCCCTGTC...AGAAGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp TGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGAGTGAGCGGAGGTGGTaGCAGCATGAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CLGEGSQHRLLCQPKAQPSERRW*QHEPLG
Trigger: ACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACT...CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp GCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AWERAASTDCSASPRRSRNRASE*RQATKR
Trigger: CCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTT...ACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp TGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGTCGCGGCCTGTGGCCTaGGCCACTGCCTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CSASPRRSRPLRDLAMNRSRPVA*ATALRR
Trigger: CCTTCTCAAGGCAGTGGCCCAGGCCACAGGCCGCGA...CCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR TCA 90 bp TCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTGGAAGCACTGCCAGTaGGCCTGGCGATGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: SASPRRSRPLRDLAMNRAWKHCQ*AWRCRG
Trigger: TCCGCGACATCGCCAGGCTCACTGGCAGTGCTTCCA...AGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp CTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGGGGCTCCGTCTCTCTaGTGCTATTGGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPGRGQPAPTALPAQGAAGAPSL*CYWMPP
Trigger: AGGAGGCATCCAATAGCAGCAGAGAGACGGAGCCCC...GGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTCAGCACCGACTGCTCTaGCAGCCCAAGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARQHRLL*QPKAQP
Trigger: CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTG...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGGGCGTGAGGCTCACTaGCTGGGAGAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHGREAH*LGEGSQ
Trigger: CTGGCTGCCCTCTCCCAGGCAGTGAGCCTCACGCCC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGGGTCTCCTCTTCTGTaGGACGCTTCGGAATCCCTG +
Preference number: 4 (lower is better)
Translates to: LPGRGQPAPTALPAQGAAGSPLL*DASESL
Trigger: CAGGGATTCCGAAGCGTCGCACAGAAGAGGAGACCC...GGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp GCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTTCCAGGGCAGGCTTCTaGCCTTTAGCAGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: AWERAASTDCSASPRRSRSRAGF*PLAGLR
Trigger: CCTTAGCCCTGCTAAAGGCCAGAAGCCTGCCCTGGA...ACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGGGGCTTGGGAGGCGTaGTGGGCTGGTCCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARGAWEA*WAGPRL
Trigger: AAGACGGGGACCAGCCCACCACGCCTCCCAAGCCCC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGACAGGGAGGAGGTCTaGAGGCGACAGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWDREEV*RRQGHH
Trigger: GTGGTGGCCCTGTCGCCTCCAGACCTCCTCCCTGTC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCACTTCAGCCTCTGTaGGGCTTTCTTTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: AWERAASTDCSASPRRSRPLQPL*GFLSGS
Trigger: AGACCCCGAAAGAAAGCCTCACAGAGGCTGAAGTGG...ACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR TCA 90 bp GCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTCTCCTGGGCCACTGCCTTaGGAAGGACACCATCACCCA +
Preference number: 4 (lower is better)
Translates to: ASPRRSRPLRDLAMNRASPGPLP*EGHHHP
Trigger: TGGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGG...AGAAGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR TCA 90 bp CTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGATGAACCGGGCTTCTaGGTGGCGGCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LLCQPKAQPSAQGPSDEPDEPGF*VAAGHK
Trigger: TTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATC...CGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp TCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTCGGGGAGGCTTGGTCTaGTCTTCCTCCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SASPRRSRPLRDLAMNRARGGLV*SSSSCS
Trigger: ACTGCAGGAGGAGGAAGAGCAGACCAAGCCTCCCCG...AGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp TGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGCGGAGCGCAGCAAGTTaGTCAGCGTCTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: CSASPRRSRPLRDLAMNRRSAAS*SASPPS
Trigger: GGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCG...CCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp CACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGTGTGGCCTGGGCCACTaGCTTGAGAAGGACACCATC +
Preference number: 4 (lower is better)
Translates to: HCLGEGSQHRLLCQPKAQCGLGH*LEKDTI
Trigger: GATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACA...CTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGCAGCCAGCACCGACTaGTCTGCCAGCCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAAASTD*SASPRR
Trigger: GCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGGCCGCCTTCCTCCCTaGCCTCTTCACCGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARGRLPP*PLHRRV
Trigger: GACTCTCCGGTGAAGAGGCCAGGGAGGAAGGCGGCC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGGCCGCCTTCCTCCCTaGCCTCTTCACCGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQGRLPP*PLHRRV
Trigger: GACTCTCCGGTGAAGAGGCCAGGGAGGAAGGCGGCC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGTGTTCTCAGGAGATGTaGCAGGACGGGGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CSASPRRSRPLRDLAMNRCSQEM*QDGAGR
Trigger: TCTCCCCGCCCCGTCCTGCCACATCTCCTGAGAACA...CCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGCTTGGGAGGCGTGGTaGGCTGGTCCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHAWEAW*AGPRLL
Trigger: GAGAAGACGGGGACCAGCCCACCACGCCTCCCAAGC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGAGGTCTTTAGGGGCTTaGGAGGCGTGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLCQPKAQPSAQGPSDEPRSLGA*EAWWAG
Trigger: ACCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCT...CGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTGCCGACCTGTGGCCTaGGCCACTGCCTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWCRPVA*ATALRR
Trigger: CCTTCTCAAGGCAGTGGCCCAGGCCACAGGTCGGCA...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTCCTCCCACACAGCGCTaGGGTCCAGCCAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAPPTQR*GPASGR
Trigger: CCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGG...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GAGGCTCACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGACGCTTCGGAATCCCTaGTGGGGAACTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: EAHCLGEGSQHRLLCQPKTLRNP*WGTVHG
Trigger: CCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGT...CTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR TCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTTGGAAGCACTGCCAGTaGGCCTGGCGATGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARWKHCQ*AWRCRG
Trigger: TCCGCGACATCGCCAGGCTCACTGGCAGTGCTTCCA...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GGTAGGCGCCGATCACCACCAGGTCCAGGGTGTCACCCACGCCATCAAGGTAGTGTTTCAGGACCTCGCTaGTGCCCCGGGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GRRRSPPGPGCHPRHQGSVSGPR*CPGWDG
Trigger: CCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAAC...ACTACCTTGATGGCGTGGGTGACACCCTGGACCTGGTGGTGATCGGCGCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGTCCGTTTCGGGAGCTaGTTCCGAGCTGTGCGACGC +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQVRFGS*FRAVRR
Trigger: GCGTCGCACAGCTCGGAAGCAGCTCCCGAAACGGAC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGCGGGGAGGCTTGGTCTaGTCTTCCTCCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWRGGLV*SSSSCS
Trigger: ACTGCAGGAGGAGGAAGAGCAGACCAAGCCTCCCCG...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGCGTCTTGGGAGCTCTaGGGGGAGGCTTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQASWEL*GEAWSA
Trigger: AGCAGACCAAGCCTCCCCGCAGAGCTCCCAAGACGC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGACGGACGGACTCCAGCTaGCGACCTGTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRRTDSS*RPVAWA
Trigger: GGCCCAGGCCACAGGTCGGCAGCTGGAGTCCGTCCG...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGGGCTCAGCTTGCAGTaGTCCGGGAGACGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQGLSLQ*SGRRSR
Trigger: CCTGGAACGTCTCCCGGAGCACTGCAAGCTGAGCCC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGTGACAGTTGTGGCTaGGTGTCTCCCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LLCQPKAQPSAQGPSDEPGDSCG*VSPFSR
Trigger: GCGAGAGAAGGGAGACACGCAGCCACAACTGTCACC...CGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGGGTCCAACCCCCTTTaGTCTTCCCTGGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWGSNPL*SSLVRG
Trigger: TCCACGCACCAGGGAAGAGCAAAGGGGGTTGGACCC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTGTTCTCAGGAGATGTaGCAGGACGGGGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWCSQEM*QDGAGR
Trigger: TCTCCCCGCCCCGTCCTGCCACATCTCCTGAGAACA...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGGCAGTTCCTGCTTCGTaGCCACCTCAGGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: HCLGEGSQHRLLCQPKAQAVPAS*PPQALK
Trigger: TTTCAGAGCCTGAGGTGGCCACGAAGCAGGAACTGC...CTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp CTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCAGGATTGTAACCAGATaGATCCAGGGGTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LPGRGQPAPTALPAQGAARIVTR*IQGSLS
Trigger: GCTGAGGGACCCCTGGATCCATCTGGTTACAATCCT...GGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGAGTGAGCGGAGGTGGTaGCAGCATGAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWSERRW*QHEPLG
Trigger: ACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACT...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGCTGGTGGGAATTCTTaGCCCGGGGGCGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAAGGNS*PGGVRL
Trigger: GAGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGCCCTTTGCTCTTCCCTaGTGCGTGGAGCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWPFALP*CVEQAW
Trigger: CCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGG...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGCCTTGAGGCTCTGGTaGTGCTCCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQALRLW*CSSSSS
Trigger: TGAGGAGCTGGAGGAGCATCACCAGAGCCTCAAGGC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTCTGTCAGCTGCTCCTTaGGTTGGTCCCGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGLSAAP*VGPARR
Trigger: GCGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAG...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR GCA 90 bp CGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAAATTCCACTCCTTCAGTaGCGCCTTTGGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLLCQPKAQPSAQGPSDEIPLLQ*RLWRGL
Trigger: GAGCCCCCTCCAAAGGCGGCACTGAAGGAGTGGAAT...TTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCCTCTTCCCCTTCGCTaGCCAGGACCCGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTPLPLR*PGPGPP
Trigger: AGGCGGCCCGGGTCCTGGGCAGCGAAGGGGAAGAGG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTCGGAGCGCAGCAAGTTaGTCAGCGTCTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARRSAAS*SASPPS
Trigger: GGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCG...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCTTCCCTCCTGCTTCTaGCATCAGCCCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQLPSCF*HQPQFP
Trigger: GGGGAACTGGGGCTGATGGCAGAAGCAGGAGGGAAG...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTTCAGTGCCGCCTTTaGAGGGGGCTCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHLQCRL*RGLRLS
Trigger: AGAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAG...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGATGGGGAACTGTCCATaGGAGAGGTGTCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TDCSASPRRSRPLRDLAMMGNCP*ERCQRG
Trigger: CCCTCTCTGACACCTCTCCCATGGACAGTTCCCCAT...CATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGGGGCTTGGGAGGCGTaGTGGGCTGGTCCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRGAWEA*WAGPRL
Trigger: AAGACGGGGACCAGCCCACCACGCCTCCCAAGCCCC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTCTTCGGGGTCTCTGCTTTaGAGGTCTTTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ASPRRSRPLRDLAMNRASSGSLL*RSLGAW
Trigger: CCAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGA...AGAAGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTTGCCGACCTGTGGCCTaGGCCACTGCCTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRACRPVA*ATALRR
Trigger: CCTTCTCAAGGCAGTGGCCCAGGCCACAGGTCGGCA...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGGCAGCATGAGCCTCTaGGTGCTGCGGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAGSMSL*VLRLFS
Trigger: CGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWMPRVG*ANIGFR
Trigger: CCTGAAACCAATGTTGGCCCATCCCACCCGGGGCAT...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGCCGCCTTCCAGGGCGTaGATCTGTGCCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQPPSRA*ICALCP
Trigger: CGGGCAGAGGGCACAGATCCACGCCCTGGAAGGCGG...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCCGCACGTAAGGGCGTaGGCTGGGCAGCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTPHVRA*AGQHQR
Trigger: GCGCTGGTGCTGCCCAGCCCACGCCCTTACGTGCGG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGAGGTGGTGGCAGCATaGGCCTCTGGGTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTEVVAA*ASGCCG
Trigger: GCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGATGAACCGGGCTTCTaGGTGGCGGCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRADEPGF*VAAGHK
Trigger: TTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGTTTCAGGACCTCGCTaGTGCCCCGGGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQVSGPR*CPGWDG
Trigger: CCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAAC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGTTTCAGGACCTCGCTaGTGCCCCGGGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRVSGPR*CPGWDG
Trigger: CCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAAC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGCAGGAGTCTTTCACTaGCTGCTCCAGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQAGVFH*LLQELG
Trigger: GCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTTCAGGGTCAGAGCCTaGGTCCTCGCCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWFRVRA*VLALLV
Trigger: AACCAACAAGGCGAGGACTCAGGCTCTGACCCTGAA...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCGCCAGGCGCGCCTCTaGAGTCCCAAGTTCGCGCCA +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTRQARL*SPKFAP
Trigger: TGGCGCGAACTTGGGACTGCAGAGGCGCGCCTGGCG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCTGTCAGCTGCTCCTTaGGTTGGTCCCGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTLSAAP*VGPARR
Trigger: GCGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGCTCCGTCTCTCTGCTaGTATTGGATGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLCQPKAQPSAQGPSDEPAPSLC*YWMPPS
Trigger: AGAAGGAGGCATCCAATAGCAGCAGAGAGACGGAGC...CGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGGGGCTCCGTCTCTCTaGTGCTATTGGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHGAPSL*CYWMPP
Trigger: AGGAGGCATCCAATAGCAGCAGAGAGACGGAGCCCC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTATTCCACTCCTTCAGTaGCGCCTTTGGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARIPLLQ*RLWRGL
Trigger: GAGCCCCCTCCAAAGGCGGCACTGAAGGAGTGGAAT...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGCTGCTTCCGAGCTGTaGGACGCTTCGGAATCCCTG +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAAASEL*DASESL
Trigger: CAGGGATTCCGAAGCGTCGCACAGCTCGGAAGCAGC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTCGGGGAGGCTTGGTCTaGTCTTCCTCCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRARGGLV*SSSSCS
Trigger: ACTGCAGGAGGAGGAAGAGCAGACCAAGCCTCCCCG...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCCAAGCTCCAGGCCCTaGTGGGGTGGCCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTPSSRP*WGGPRW
Trigger: CCACCTTGGGCCACCCCAGCAGGGCCTGGAGCTTGG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCGGACGGACTCCAGCTaGCGACCTGTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLRTDSS*RPVAWA
Trigger: GGCCCAGGCCACAGGTCGGCAGCTGGAGTCCGTCCG...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTC +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQVAFLG*LSPDGL
Trigger: GAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGAC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCAGCACCGACTGCTCTaGCAGCCCAAGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTQHRLL*QPKAQP
Trigger: CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCAGCCAGCACCGACTaGTCTGCCAGCCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTAASTD*SASPRR
Trigger: GCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGCCTCGGTCTGGGTTGTaGAATAGGAAATACCCCCGG +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWPRSGL*NRKYPR
Trigger: CCGGGGGTATTTCCTATTGCACAACCCAGACCGAGG...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGTTTGCTCTTCCCTGGTaGGTGGAGCAGGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQFALPW*VEQAWP
Trigger: TGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAA...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGTCCAGGGCAGGCTTCTaGCCTTTAGCAGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQSRAGF*PLAGLR
Trigger: CCTTAGCCCTGCTAAAGGCCAGAAGCCTGCCCTGGA...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGGAGGCGTGGTGGGCTaGTCCCCGTCTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRGGVVG*SPSSPS
Trigger: GGAAGGAGAAGACGGGGACCAGCCCACCACGCCTCC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGGGGCTTGGGAGGCGTaGTGGGCTGGTCCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTGAWEA*WAGPRL
Trigger: AAGACGGGGACCAGCCCACCACGCCTCCCAAGCCCC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGGTCTCTGCTTTaGAGGTCTTTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWSGSLL*RSLGAW
Trigger: CCAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGA...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTATCCACCATGGCTGGTaGGAATTCTTGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAIHHGW*EFLARG
Trigger: CCCCCGGGCCAAGAATTCCCACCAGCCATGGTGGAT...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCCGCCTTCCAGGGCGTaGATCTGTGCCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTPPSRA*ICALCP
Trigger: CGGGCAGAGGGCACAGATCCACGCCCTGGAAGGCGG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTTGGTGTCCAGGGAGGTaGCGAAGACAAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARWCPGR*RRQTRP
Trigger: AGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCA...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATTCTGCTCGATGTCCTTaGTGTCCAGGGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHSARCP*CPGRWR
Trigger: TCGCCACCTCCCTGGACACCAAGGACATCGAGCAGA...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTCCACCTGAGCACTGGTaGTGGCCTGCTCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGPPEHW*WPAPAA
Trigger: AGCAGCCGGAGCAGGCCACCACCAGTGCTCAGGTGG...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGCCAGGACCTTGCATATaGCCTGCAGCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWPGPCI*PAAPHC
Trigger: ACAGTGAGGAGCTGCAGGCCATATGCAAGGTCCTGG...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTCCCTTTGCTCTTCCCTaGTGCGTGGAGCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAPFALP*CVEQAW
Trigger: CCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGG...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTTCTTCCAGGACTTCCTaGATGGTCCGTTTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARSSRTS*MVRFGS
Trigger: GCTCCCGAAACGGACCATTCAGGAAGTCCTGGAAGA...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGGCCACCTCAGGCTCTaGAACGCTTTCCGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQGHLRL*NAFRRG
Trigger: ACCCCGACGGAAAGCGTTTCAGAGCCTGAGGTGGCC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGTGGAAGCACTGCCAGTaGGCCTGGCGATGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQWKHCQ*AWRCRG
Trigger: TCCGCGACATCGCCAGGCTCACTGGCAGTGCTTCCA...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCTTGGCCCGGGGGCGTaGGGCTCACTGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGLGPGA*GSLPGR
Trigger: TCTCCCAGGCAGTGAGCCTCACGCCCCCGGGCCAAG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGTTTCAGGACCTCGCTaGTGCCCCGGGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTVSGPR*CPGWDG
Trigger: CCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAAC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTCTTCACAGGGGGATGTaGGCACCCCTCGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGLHRGM*APLGLG
Trigger: ACCCAGACCGAGGGGTGCTCACATCCCCCTGTGAAG...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCCTCTTCCCCTTCGCTaGCCAGGACCCGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGPLPLR*PGPGPP
Trigger: AGGCGGCCCGGGTCCTGGGCAGCGAAGGGGAAGAGG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGCGTCTTGGGAGCTCTaGGGGGAGGCTTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRASWEL*GEAWSA
Trigger: AGCAGACCAAGCCTCCCCGCAGAGCTCCCAAGACGC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCCAAGCTCCAGGCCCTaGTGGGGTGGCCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLPSSRP*WGGPRW
Trigger: CCACCTTGGGCCACCCCAGCAGGGCCTGGAGCTTGG...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTVAFLG*LSPDGL
Trigger: GAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGAC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGTCTGCTTCAGGATCATaGCTTGCTCCTCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQSASGS*LAPPAT
Trigger: CGTGGCTGGAGGAGCAAGGCATGATCCTGAAGCAGA...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGGGCTCAGCTTGCAGTaGTCCGGGAGACGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQGLSLQ*SGRRSR
Trigger: CCTGGAACGTCTCCCGGAGCACTGCAAGCTGAGCCC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGCGTACAAACACACCTaGACCTGGATCTCAGACGCA +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWAYKHT*TWISDA
Trigger: TGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTACGC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATAGGAACTCGGCGATCTaGTCGATGTCCTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHRNSAI*SMSLVS
Trigger: GGACACCAAGGACATCGAGCAGATCGCCGAGTTCCT...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTAGGAACTCGGCGATCTaGTCGATGTCCTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARRNSAI*SMSLVS
Trigger: GGACACCAAGGACATCGAGCAGATCGCCGAGTTCCT...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGAGCTTGAGCCAGTTGTaGGATCTCTTGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWSLSQL*DLLAIS
Trigger: CGAGATCGCCAAGAGATCGCACAACTGGCTCAAGCT...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGAGCTGCTCCTTGCGTTaGTCCCGCGCGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGSCSLR*SRAPLP
Trigger: GGGCAGCGGCGCGCGGGACCAACGCAAGGAGCAGCT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGGCCGCCTTCCTCCCTaGCCTCTTCACCGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTGRLPP*PLHRRV
Trigger: GACTCTCCGGTGAAGAGGCCAGGGAGGAAGGCGGCC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCTTGGGAGGCGTGGTaGGCTGGTCCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTAWEAW*AGPRLL
Trigger: GAGAAGACGGGGACCAGCCCACCACGCCTCCCAAGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCTGGTGGGAATTCTTaGCCCGGGGGCGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTAGGNS*PGGVRL
Trigger: GAGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGTCCCAGCATCCACCATaGCTGGTGGGAATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQSQHPP*LVGILG
Trigger: GCCAAGAATTCCCACCAGCCATGGTGGATGCTGGGA...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATTCCCAGCATCCACCATaGCTGGTGGGAATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHSQHPP*LVGILG
Trigger: GCCAAGAATTCCCACCAGCCATGGTGGATGCTGGGA...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAGGGGCTCACGTACCAGGGACTCTCCATTGAGGTAGATGAGGTCGAAGGCGTACCGCCTTCCAGGGCGTaGATCTGTGCCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: KGLTYQGLSIEVDEVEGVPPSRA*ICALCP
Trigger: CGGGCAGAGGGCACAGATCCACGCCCTGGAAGGCGG...TACGCCTTCGACCTCATCTACCTCAATGGAGAGTCCCTGGTACGTGAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHRVVST*NGWICF
Trigger: GAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCG...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTTCTGCTCGATGTCCTTaGTGTCCAGGGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRASARCP*CPGRWR
Trigger: TCGCCACCTCCCTGGACACCAAGGACATCGAGCAGA...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTCCTGAGCACTGGTGGTaGCCTGCTCCGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGPEHWW*PAPAAC
Trigger: ACAAGCAGCCGGAGCAGGCCACCACCAGTGCTCAGG...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCCACCTGAGCACTGGTaGTGGCCTGCTCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTPPEHW*WPAPAA
Trigger: AGCAGCCGGAGCAGGCCACCACCAGTGCTCAGGTGG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTTCTTCCAGGACTTCCTaGATGGTCCGTTTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRASSRTS*MVRFGS
Trigger: GCTCCCGAAACGGACCATTCAGGAAGTCCTGGAAGA...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGAGGTGGTGGCAGCATaGGCCTCTGGGTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGEVVAA*ASGCCG
Trigger: GCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGATGAACCGGGCTTCTaGGTGGCGGCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRDEPGF*VAAGHK
Trigger: TTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCTTGGCCCGGGGGCGTaGGGCTCACTGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHLGPGA*GSLPGR
Trigger: TCTCCCAGGCAGTGAGCCTCACGCCCCCGGGCCAAG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGCCTTGAGGCTCTGGTaGTGCTCCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQALRLW*CSSSSS
Trigger: TGAGGAGCTGGAGGAGCATCACCAGAGCCTCAAGGC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTTACAAACAGGCCACCTaGGCACTGGTGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGYKQAT*ALVVAC
Trigger: GCAGGCCACCACCAGTGCTCAGGTGGCCTGTTTGTA...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGGTCCCGCGCGCCGCTaGCCGGGCAACACACTCAGA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHGPARR*PGNTLR
Trigger: TCTGAGTGTGTTGCCCGGGCAGCGGCGCGCGGGACC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp TCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTCTGCTGCTATTGGATaGCTCCTTCTCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SASPRRSRPLRDLAMNRASAAIG*LLLRLL
Trigger: AAGAAGCCTGAGAAGGAGGCATCCAATAGCAGCAGA...AGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCGTCTTGGGAGCTCTaGGGGGAGGCTTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTASWEL*GEAWSA
Trigger: AGCAGACCAAGCCTCCCCGCAGAGCTCCCAAGACGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCCAAGCTCCAGGCCCTaGTGGGGTGGCCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGPSSRP*WGGPRW
Trigger: CCACCTTGGGCCACCCCAGCAGGGCCTGGAGCTTGG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCGGACGGACTCCAGCTaGCGACCTGTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHRTDSS*RPVAWA
Trigger: GGCCCAGGCCACAGGTCGGCAGCTGGAGTCCGTCCG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCAGCACCGACTGCTCTaGCAGCCCAAGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGQHRLL*QPKAQP
Trigger: CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGCAGCCAGCACCGACTaGTCTGCCAGCCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGAASTD*SASPRR
Trigger: GCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGGGCGTGAGGCTCACTaGCTGGGAGAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGGREAH*LGEGSQ
Trigger: CTGGCTGCCCTCTCCCAGGCAGTGAGCCTCACGCCC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGGGCTCAGCTTGCAGTaGTCCGGGAGACGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTGLSLQ*SGRRSR
Trigger: CCTGGAACGTCTCCCGGAGCACTGCAAGCTGAGCCC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGATCCCTGGGCTCAGCTTaGAGTGCTCCGGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRSLGSA*SAPGDV
Trigger: AACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGA...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GGCGCCGATCACCACCAGGTCCAGGGTGTCACCCACGCCATCAAGGTAGTCCTTCAGGGCGTGGATCTGTaGCCTCTGCCCGTCATATTT +
Preference number: 4 (lower is better)
Translates to: GADHHQVQGVTHAIKVVLQGVDL*PLPVIF
Trigger: AAATATGACGGGCAGAGGGCACAGATCCACGCCCTG...AAGGACTACCTTGATGGCGTGGGTGACACCCTGGACCTGGTGGTGATCGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGAGTCTTTCACTGACTaGTCCAGGAACTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQESFTD*SRNSAI
Trigger: GATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTGCACTGGTGGTGGCCTaGTCCGGCTGCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGALVVA*SGCLSS
Trigger: TGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGCACTGGTGGTGGCCTaGTCCGGCTGCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQALVVA*SGCLSS
Trigger: TGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGCTAATGGCATCAGACTaGCCCCTCCACACTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWLMASD*PLHTSH
Trigger: ATGAGAAGTGTGGAGGGGGCAGTCTGATGCCATTAG...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGGACACAGCACTATGTaGTATGGGGCACAGCACTTG +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHGHSTM*YGAQHL
Trigger: CAAGTGCTGTGCCCCATAGCACATAGTGCTGTGTCC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGCTGCTCCTTGCGTTaGTCCCGCGCGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSCSLR*SRAPLP
Trigger: GGGCAGCGGCGCGCGGGACCAACGCAAGGAGCAGCT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGCTTCAGTGCCGCCTTTaGAGGGGGCTCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQLQCRL*RGLRLS
Trigger: AGAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAG...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGTGTTCTCAGGAGATGTaGCAGGACGGGGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQCSQEM*QDGAGR
Trigger: TCTCCCCGCCCCGTCCTGCCACATCTCCTGAGAACA...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGCAGTTCCTGCTTCGTaGCCACCTCAGGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAAVPAS*PPQALK
Trigger: TTTCAGAGCCTGAGGTGGCCACGAAGCAGGAACTGC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTAGGATTGTAACCAGATaGATCCAGGGGTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARRIVTR*IQGSLS
Trigger: GCTGAGGGACCCCTGGATCCATCTGGTTACAATCCT...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAAGTGAGCGGAGGTGGTaGCAGCATGAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRSERRW*QHEPLG
Trigger: ACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACT...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCACCGCCTTCCAGGGCGTaGATCTGTGCCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPPPSRA*ICALCP
Trigger: CGGGCAGAGGGCACAGATCCACGCCCTGGAAGGCGG...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATAAACACACCTGCACCTaGATCTCAGACGCATCCACC +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHKHTCT*ISDAST
Trigger: GGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTT...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CAGCTGCCGGCGCCGGGAAAGGGGCTCACGTACCAGGGACTCTCCATTGAGGTATGGCGATCTCGTAGGTaGCATCAACATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QLPAPGKGLTYQGLSIEVWRSRR*HQHPGS
Trigger: AGACCCTGGATGTTGATGCCACCTACGAGATCGCCA...TACCTCAATGGAGAGTCCCTGGTACGTGAGCCCCTTTCCCGGCGCCGGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGAGTTGTGCGATCTCTTaGCGATCTCGTAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWSCAIS*RSRRWH
Trigger: ATGCCACCTACGAGATCGCCAAGAGATCGCACAACT...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCCTGAGCACTGGTGGTaGCCTGCTCCGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTPEHWW*PAPAAC
Trigger: ACAAGCAGCCGGAGCAGGCCACCACCAGTGCTCAGG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp ACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGGGTGGAAAAATGACATaGTACTTCGCTGCATGTTGG +
Preference number: 4 (lower is better)
Translates to: TDCSASPRRSRPLRDLAMGGKMT*YFAACW
Trigger: CCAACATGCAGCGAAGTATCATGTCATTTTTCCACC...CATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR TCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTACGCTTCGGAATCCCTaGTGGGGAACTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGTLRNP*WGTVHG
Trigger: CCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGT...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCCTGGGCCACTGCCTTaGGAAGGACACCATCACCCA +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTPGPLP*EGHHHP
Trigger: TGGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGAGGTGGTGGCAGCATaGGCCTCTGGGTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHEVVAA*ASGCCG
Trigger: GCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp GACGCATCCACCTCCTTGCGTTTGCGGGTGGTGAGCACTTGGAATGGCTGGATCTGCGTTTGCGGGTGGTaGGCACTTGGAATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: DASTSLRLRVVSTWNGWICVCGW*ALGMAG
Trigger: TCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCA...GATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR TCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTAGTCCTTCTTCAGCTTaGGCCAGTTGTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARSPSSA*ASCAIS
Trigger: AGAGATCGCACAACTGGCTCAAGCTGAAGAAGGACT...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTACAAACAGGCCACCTaGGCACTGGTGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTYKQAT*ALVVAC
Trigger: GCAGGCCACCACCAGTGCTCAGGTGGCCTGTTTGTA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCTGTCAGCTGCTCCTTaGGTTGGTCCCGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHLSAAP*VGPARR
Trigger: GCGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp TCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTGACATGATACTTCGCTaGATGTTGGCGTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: SASPRRSRPLRDLAMNRADMILR*MLASEF
Trigger: GAATTCTGACGCCAACATGCAGCGAAGTATCATGTC...AGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCTGCTGCTATTGGATaGCTCCTTCTCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWSAAIG*LLLRLL
Trigger: AAGAAGCCTGAGAAGGAGGCATCCAATAGCAGCAGA...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGCTCCGTCTCTCTGCTaGTATTGGATGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAAPSLC*YWMPPS
Trigger: AGAAGGAGGCATCCAATAGCAGCAGAGAGACGGAGC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACCTCTTCCCCTTCGCTaGCCAGGACCCGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPPLPLR*PGPGPP
Trigger: AGGCGGCCCGGGTCCTGGGCAGCGAAGGGGAAGAGG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCTGCTTCCGAGCTGTaGGACGCTTCGGAATCCCTG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTAASEL*DASESL
Trigger: CAGGGATTCCGAAGCGTCGCACAGCTCGGAAGCAGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCGGGGAGGCTTGGTCTaGTCTTCCTCCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTRGGLV*SSSSCS
Trigger: ACTGCAGGAGGAGGAAGAGCAGACCAAGCCTCCCCG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCGGAGCGCAGCAAGTTaGTCAGCGTCTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTRSAAS*SASPPS
Trigger: GGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGATGTGGCCTGGGCCACTaGCTTGAGAAGGACACCATC +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRCGLGH*LEKDTI
Trigger: GATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACA...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCCAGCACCGACTGCTCTaGCAGCCCAAGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSQHRLL*QPKAQP
Trigger: CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTG...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGGGCGTGAGGCTCACTaGCTGGGAGAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHGREAH*LGEGSQ
Trigger: CTGGCTGCCCTCTCCCAGGCAGTGAGCCTCACGCCC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTACCTCGCAGAACGTCTaGTTCAGGATCATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRATSQNV*FRIMPC
Trigger: GCAAGGCATGATCCTGAAGCAGACGTTCTGCGAGGT...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCAGACGTTCCAGGCCGTaGTCCAGCAGCACGGGGATA +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTRRSRP*SSSTGI
Trigger: TATCCCCGTGCTGCTGGAGCACGGCCTGGAACGTCT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTCCCTGGGCTCAGCTTaGAGTGCTCCGGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTSLGSA*SAPGDV
Trigger: AACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATTTCGCAGGTGAAAGCTaGCTCCTCAAAGCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHFAGES*LLKAFQ
Trigger: CTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAA...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTAGCTTGAGCCAGTTGTaGGATCTCTTGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRASLSQL*DLLAIS
Trigger: CGAGATCGCCAAGAGATCGCACAACTGGCTCAAGCT...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GGCGCCGATCACCACCAGGTCCAGGGTGTCACCCACGCCATCAAGGTAGTCCTTAGCTTGAGCCAGTTGTaGGATCTCTTGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: GADHHQVQGVTHAIKVVLSLSQL*DLLAIS
Trigger: CGAGATCGCCAAGAGATCGCACAACTGGCTCAAGCT...AAGGACTACCTTGATGGCGTGGGTGACACCCTGGACCTGGTGGTGATCGGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGTGGCCTGCTCCGGCTaGTTGTCTTCACGGACTCGA +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTVACSG*LSSRTR
Trigger: TCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCAC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCACTGGTGGTGGCCTaGTCCGGCTGCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTALVVA*SGCLSS
Trigger: TGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCTTCAGTGCCGCCTTTaGAGGGGGCTCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTLQCRL*RGLRLS
Trigger: AGAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGTCCAGGGCAGGCTTCTaGCCTTTAGCAGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQSRAGF*PLAGLR
Trigger: CCTTAGCCCTGCTAAAGGCCAGAAGCCTGCCCTGGA...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTGTTCTCAGGAGATGTaGCAGGACGGGGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTCSQEM*QDGAGR
Trigger: TCTCCCCGCCCCGTCCTGCCACATCTCCTGAGAACA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGGAGGCGTGGTGGGCTaGTCCCCGTCTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGGGVVG*SPSSPS
Trigger: GGAAGGAGAAGACGGGGACCAGCCCACCACGCCTCC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTGCTTGGGAGGCGTGGTaGGCTGGTCCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPAWEAW*AGPRLL
Trigger: GAGAAGACGGGGACCAGCCCACCACGCCTCCCAAGC...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGGGGCTTGGGAGGCGTaGTGGGCTGGTCCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHGAWEA*WAGPRL
Trigger: AAGACGGGGACCAGCCCACCACGCCTCCCAAGCCCC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAGACAGGGAGGAGGTCTaGAGGCGACAGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPDREEV*RRQGHH
Trigger: GTGGTGGCCCTGTCGCCTCCAGACCTCCTCCCTGTC...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTAGCTCCAGGCCCTGCTaGGGTGGCCCAAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPSSRPC*GGPRWL
Trigger: CAACCACCTTGGGCCACCCCAGCAGGGCCTGGAGCT...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCAGTGAGCGGAGGTGGTaGCAGCATGAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTSERRW*QHEPLG
Trigger: ACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTNRASE*RQATKR
Trigger: CCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGCTGGTGGGAATTCTTaGCCCGGGGGCGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGAGGNS*PGGVRL
Trigger: GAGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCATCCACCATGGCTGGTaGGAATTCTTGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTIHHGW*EFLARG
Trigger: CCCCCGGGCCAAGAATTCCCACCAGCCATGGTGGAT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CGCATCCACCTCCTTGCGTTTGCGGGTGGTGAGCACTTGGAATGGCTGGATCTGATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RIHLLAFAGGEHLEWLDLMPRVG*ANIGFR
Trigger: CCTGAAACCAATGTTGGCCCATCCCACCCGGGGCAT...CAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATAGCACTTGGAATGGCTaGATCTGCTTCTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHSTWNG*ICFFSR
Trigger: CCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCT...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGGTGAGCACTTGGAATaGCTGGATCTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWGEHLE*LDLLLF
Trigger: GAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GGTGAGCACTTGGAATGGCTGGATCTGCTTCTTTTCCCGGTCCCAAGCCACGGCTGGTGTCCAGGGAGGTaGCGAAGACAAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: GEHLEWLDLLLFPVPSHGWCPGR*RRQTRP
Trigger: AGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCA...GCCGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp CTCGATGTCCTTGGTGTCCAGGGAGGTGGCGAAGACAAACTCGCCCTCTGTCTCTCTGCTCGATGTCCTTaGTGTCCAGGGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LDVLGVQGGGEDKLALCLSARCP*CPGRWR
Trigger: TCGCCACCTCCCTGGACACCAAGGACATCGAGCAGA...GAGACAGAGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCAAGGACATCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGTCTGCTCGATGTCCTTaGTGTCCAGGGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQSARCP*CPGRWR
Trigger: TCGCCACCTCCCTGGACACCAAGGACATCGAGCAGA...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACCGCACGTAAGGGCGTaGGCTGGGCAGCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPPHVRA*AGQHQR
Trigger: GCGCTGGTGCTGCCCAGCCCACGCCCTTACGTGCGG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCCGCACGTAAGGGCGTaGGCTGGGCAGCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIPHVRA*AGQHQR
Trigger: GCGCTGGTGCTGCCCAGCCCACGCCCTTACGTGCGG...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCCTCCCACACAGCGCTaGGGTCCAGCCAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHPPTQR*GPASGR
Trigger: CCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCCTGAGCACTGGTGGTaGCCTGCTCCGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLPEHWW*PAPAAC
Trigger: ACAAGCAGCCGGAGCAGGCCACCACCAGTGCTCAGG...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCCACCTGAGCACTGGTaGTGGCCTGCTCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGPPEHW*WPAPAA
Trigger: AGCAGCCGGAGCAGGCCACCACCAGTGCTCAGGTGG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTCCACTTCAGCCTCTGTaGGGCTTTCTTTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGPLQPL*GFLSGS
Trigger: AGACCCCGAAAGAAAGCCTCACAGAGGCTGAAGTGG...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCTTGGCCCGGGGGCGTaGGGCTCACTGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYLGPGA*GSLPGR
Trigger: TCTCCCAGGCAGTGAGCCTCACGCCCCCGGGCCAAG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCTTGGCCCGGGGGCGTaGGGCTCACTGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPLGPGA*GSLPGR
Trigger: TCTCCCAGGCAGTGAGCCTCACGCCCCCGGGCCAAG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTATTTGTATTCGCAGGTaGAAGCTGCCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARICIRR*KLPPQS
Trigger: GCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAAT...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGCTTCCTGATTCCTGCTaGAGATCTTCACCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQLPDSC*RSSPPR
Trigger: GCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAG...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCCAGTGTTGTCTTCCTaGTTCCTGCTGAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHPVLSS*FLLKIF
Trigger: GAAGATCTTCAGCAGGAATCAGGAAGACAACACTGG...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCAGGAGTCTTTCACTaGCTGCTCCAGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTAGVFH*LLQELG
Trigger: GCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp GTAGGCGCCGATCACCACCAGGTCCAGGGTGTCACCCACGCCATCAAGGTAGTCAGTCCTTCTTCAGCTTaGGCCAGTTGTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: VGADHHQVQGVTHAIKVVSPSSA*ASCAIS
Trigger: AGAGATCGCACAACTGGCTCAAGCTGAAGAAGGACT...GACTACCTTGATGGCGTGGGTGACACCCTGGACCTGGTGGTGATCGGCGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR TCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCGCCTTGAGGCTCTGGTaGTGCTCCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLALRLW*CSSSSS
Trigger: TGAGGAGCTGGAGGAGCATCACCAGAGCCTCAAGGC...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTGCAGCACCAGCGCCTTaGGGCTCTGGTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPAAPAP*GSGDAP
Trigger: AGGAGCATCACCAGAGCCTCAAGGCGCTGGTGCTGC...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCTTCACAGGGGGATGTaGGCACCCCTCGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGLHRGM*APLGLG
Trigger: ACCCAGACCGAGGGGTGCTCACATCCCCCTGTGAAG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTATGAGCAACAGAACTTaGGCAGAAGGTGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARMSNRT*AEGVHW
Trigger: CCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCAT...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACGCCAGGCGCGCCTCTaGAGTCCCAAGTTCGCGCCA +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPRQARL*SPKFAP
Trigger: TGGCGCGAACTTGGGACTGCAGAGGCGCGCCTGGCG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCGCCAGGCGCGCCTCTaGAGTCCCAAGTTCGCGCCA +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIRQARL*SPKFAP
Trigger: TGGCGCGAACTTGGGACTGCAGAGGCGCGCCTGGCG...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACTGTCAGCTGCTCCTTaGGTTGGTCCCGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPLSAAP*VGPARR
Trigger: GCGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCTCTTCCCCTTCGCTaGCCAGGACCCGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYPLPLR*PGPGPP
Trigger: AGGCGGCCCGGGTCCTGGGCAGCGAAGGGGAAGAGG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGTCCGTTTCGGGAGCTaGTTCCGAGCTGTGCGACGC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGVRFGS*FRAVRR
Trigger: GCGTCGCACAGCTCGGAAGCAGCTCCCGAAACGGAC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTGCGTCTTGGGAGCTCTaGGGGGAGGCTTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPASWEL*GEAWSA
Trigger: AGCAGACCAAGCCTCCCCGCAGAGCTCCCAAGACGC...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCGGAGCGCAGCAAGTTaGTCAGCGTCTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLRSAAS*SASPPS
Trigger: GGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCG...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTGTGGCCTGGGCCACTaGCTTGAGAAGGACACCATC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTCGLGH*LEKDTI
Trigger: GATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCGGACGGACTCCAGCTaGCGACCTGTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYRTDSS*RPVAWA
Trigger: GGCCCAGGCCACAGGTCGGCAGCTGGAGTCCGTCCG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCGGACGGACTCCAGCTaGCGACCTGTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPRTDSS*RPVAWA
Trigger: GGCCCAGGCCACAGGTCGGCAGCTGGAGTCCGTCCG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHVAFLG*LSPDGL
Trigger: GAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGAC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGGCGTGAGGCTCACTaGCTGGGAGAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPGREAH*LGEGSQ
Trigger: CTGGCTGCCCTCTCCCAGGCAGTGAGCCTCACGCCC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGTCTGCTTCAGGATCATaGCTTGCTCCTCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQSASGS*LAPPAT
Trigger: CGTGGCTGGAGGAGCAAGGCATGATCCTGAAGCAGA...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCGCACTGGTGGTGGCCTaGTCCGGCTGCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLALVVA*SGCLSS
Trigger: TGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGACCTTGCATATGGCCTaGAGCTCCTCACTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQTLHMA*SSSLSS
Trigger: CGAGGACAGTGAGGAGCTGCAGGCCATATGCAAGGT...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAGCTGCTCCTTGCGTTaGTCCCGCGCGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSCSLR*SRAPLP
Trigger: GGGCAGCGGCGCGCGGGACCAACGCAAGGAGCAGCT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTCCAGGGCAGGCTTCTaGCCTTTAGCAGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTSRAGF*PLAGLR
Trigger: CCTTAGCCCTGCTAAAGGCCAGAAGCCTGCCCTGGA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGATGGGGAACTGTCCATaGGAGAGGTGTCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQMGNCP*ERCQRG
Trigger: CCCTCTCTGACACCTCTCCCATGGACAGTTCCCCAT...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGCCAGGACTTCCTGAATaGTCCGTTTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQPGLPE*SVSGAA
Trigger: AGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGG...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGACCAGGACTTCCTGAATaGTCCGTTTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRPGLPE*SVSGAA
Trigger: AGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGG...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGGAGGCGTGGTGGGCTaGTCCCCGTCTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHGGVVG*SPSSPS
Trigger: GGAAGGAGAAGACGGGGACCAGCCCACCACGCCTCC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGTCGGGGTCTCTGCTTTaGAGGTCTTTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQSGSLL*RSLGAW
Trigger: CCAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGA...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGGATGATAGTTGTTCTTaGCAGGATTGTAACCAGATG +
Preference number: 4 (lower is better)
Translates to: HCLGEGSQHRLLCQPKAQDDSCS*QDCNQM
Trigger: CATCTGGTTACAATCCTGCCAAGAACAACTATCATC...CTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGCTCCAGGCCCTGCTaGGGTGGCCCAAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSSRPC*GGPRWL
Trigger: CAACCACCTTGGGCCACCCCAGCAGGGCCTGGAGCT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTTGCCGACCTGTGGCCTaGGCCACTGCCTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPCRPVA*ATALRR
Trigger: CCTTCTCAAGGCAGTGGCCCAGGCCACAGGTCGGCA...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAGGCAGCATGAGCCTCTaGGTGCTGCGGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPGSMSL*VLRLFS
Trigger: CGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCC...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLNRASE*RQATKR
Trigger: CCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTT...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCAGCATCCACCATGGCTaGTGGGAATTCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTSIHHG*WEFLAR
Trigger: CCGGGCCAAGAATTCCCACCAGCCATGGTGGATGCT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGTTTCAGGGGAATCCCTaGGCTCAGCTTGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQFQGNP*AQLAVL
Trigger: GAGCACTGCAAGCTGAGCCCAGGGATTCCCCTGAAA...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACCGCCTTCCAGGGCGTaGATCTGTGCCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPPPSRA*ICALCP
Trigger: CGGGCAGAGGGCACAGATCCACGCCCTGGAAGGCGG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGGTGAGCACTTGGAATaGCTGGATCTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RTSPPTQRWGPASGRESQGEHLE*LDLLLF
Trigger: GAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGACGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRRVVST*NGWICF
Trigger: GAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCG...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTCGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGRVVST*NGWICF
Trigger: GAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCG...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTGGTGTCCAGGGAGGTaGCGAAGACAAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTWCPGR*RRQTRP
Trigger: AGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCCGCACGTAAGGGCGTaGGCTGGGCAGCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPPHVRA*AGQHQR
Trigger: GCGCTGGTGCTGCCCAGCCCACGCCCTTACGTGCGG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCGCACGTAAGGGCGTaGGCTGGGCAGCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYPHVRA*AGQHQR
Trigger: GCGCTGGTGCTGCCCAGCCCACGCCCTTACGTGCGG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCACTGGGGTCCAGCCAGTaGTCGGGAATCACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPLGSSQ*SGITAP
Trigger: TGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAG...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACCTCCCACACAGCGCTaGGGTCCAGCCAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPPPTQR*GPASGR
Trigger: CCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCACCTGAGCACTGGTGGTaGCCTGCTCCGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPPEHWW*PAPAAC
Trigger: ACAAGCAGCCGGAGCAGGCCACCACCAGTGCTCAGG...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCCCACCTGAGCACTGGTaGTGGCCTGCTCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSPPEHW*WPAPAA
Trigger: AGCAGCCGGAGCAGGCCACCACCAGTGCTCAGGTGG...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTACAGCCACGGGGAGCTaGTTCAGGACACAGCACTAT +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGTATGS*FRTQHY
Trigger: ATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGT...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR CAA 72 bp CGCATCCACCTCCTTGCGTTTGCGGGTGGTGAGCACTaGGAATGGCTGGATCTGCTTCTTTTCCCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RIHLLAFAGGEH*EWLDLLLFPVP
Trigger: TGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR TCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGGTGGAAAAATGACATaGTACTTCGCTGCATGTTGG +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHGGKMT*YFAACW
Trigger: CCAACATGCAGCGAAGTATCATGTCATTTTTCCACC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGGGCGGGGAGACCTGTaGGCAGTCCAGGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYGRGDL*AVQGRL
Trigger: AAGCCTGCCCTGGACTGCTCACAGGTCTCCCCGCCC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTCCTGGGCCACTGCCTTaGGAAGGACACCATCACCCA +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPPGPLP*EGHHHP
Trigger: TGGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGG...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCACCTGGGCCACTGCCTTaGGAAGGACACCATCACCCA +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPPGPLP*EGHHHP
Trigger: TGGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGG...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGAGGTGGTGGCAGCATaGGCCTCTGGGTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPEVVAA*ASGCCG
Trigger: GCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCTGGAAGCACTGCCAGTaGGCCTGGCGATGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSWKHCQ*AWRCRG
Trigger: TCCGCGACATCGCCAGGCTCACTGGCAGTGCTTCCA...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGATGAACCGGGCTTCTaGGTGGCGGCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGDEPGF*VAAGHK
Trigger: TTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCTTCCTGATTCCTGCTaGAGATCTTCACCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTLPDSC*RSSPPR
Trigger: GCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCTGCGTTTGCGGGTGGTaGGCACTTGGAATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLCVCGW*ALGMAG
Trigger: TCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCA...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCCAGCTCCTCATCACTaGAGCCAGTTCCAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTPAPHH*SQFQAC
Trigger: GCAAGCTTGGAACTGGCTTCAGTGATGAGGAGCTGG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGCAGCACCAGCGCCTTaGGGCTCTGGTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHAAPAP*GSGDAP
Trigger: AGGAGCATCACCAGAGCCTCAAGGCGCTGGTGCTGC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCATACAAACAGGCCACCTaGGCACTGGTGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPYKQAT*ALVVAC
Trigger: GCAGGCCACCACCAGTGCTCAGGTGGCCTGTTTGTA...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGATGGGGCACAGCACTTaGAAACTCTTGTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQMGHST*KLLCGH
Trigger: ATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCAT...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTTCTGCTGCTATTGGATaGCTCCTTCTCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRASAAIG*LLLRLL
Trigger: AAGAAGCCTGAGAAGGAGGCATCCAATAGCAGCAGA...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTGCTCCGTCTCTCTGCTaGTATTGGATGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGAPSLC*YWMPPS
Trigger: AGAAGGAGGCATCCAATAGCAGCAGAGAGACGGAGC...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGCTGCTTCCGAGCTGTaGGACGCTTCGGAATCCCTG +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGAASEL*DASESL
Trigger: CAGGGATTCCGAAGCGTCGCACAGCTCGGAAGCAGC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTCGGGGAGGCTTGGTCTaGTCTTCCTCCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPRGGLV*SSSSCS
Trigger: ACTGCAGGAGGAGGAAGAGCAGACCAAGCCTCCCCG...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCCAAGCTCCAGGCCCTaGTGGGGTGGCCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPPSSRP*WGGPRW
Trigger: CCACCTTGGGCCACCCCAGCAGGGCCTGGAGCTTGG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPVAFLG*LSPDGL
Trigger: GAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGAC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCAGCACCGACTGCTCTaGCAGCCCAAGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPQHRLL*QPKAQP
Trigger: CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCAGCCAGCACCGACTaGTCTGCCAGCCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPAASTD*SASPRR
Trigger: GCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGGGCGTGAGGCTCACTaGCTGGGAGAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYGREAH*LGEGSQ
Trigger: CTGGCTGCCCTCTCCCAGGCAGTGAGCCTCACGCCC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTCTGCTTCAGGATCATaGCTTGCTCCTCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTSASGS*LAPPAT
Trigger: CGTGGCTGGAGGAGCAAGGCATGATCCTGAAGCAGA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTAGACGTTCCAGGCCGTaGTCCAGCAGCACGGGGATA +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPRRSRP*SSSTGI
Trigger: TATCCCCGTGCTGCTGGAGCACGGCCTGGAACGTCT...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTTCCCTGGGCTCAGCTTaGAGTGCTCCGGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPSLGSA*SAPGDV
Trigger: AACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGA...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTTGGATCTGTGCCCTCTaGCCGTCATATTTGTATTCG +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAWICAL*PSYLYS
Trigger: CGAATACAAATATGACGGGCAGAGGGCACAGATCCA...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCAGGAACTCGGCGATCTaGTCGATGTCCTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTRNSAI*SMSLVS
Trigger: GGACACCAAGGACATCGAGCAGATCGCCGAGTTCCT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GGTGGCATCAACATCCAGGGTCTTCACCATCAGCCCCTCGCAGGAGTCTTTCACAGGAACTCGGCGATCTaGTCGATGTCCTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GGINIQGLHHQPLAGVFHRNSAI*SMSLVS
Trigger: GGACACCAAGGACATCGAGCAGATCGCCGAGTTCCT...GTGAAAGACTCCTGCGAGGGGCTGATGGTGAAGACCCTGGATGTTGATGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCAGCTTGCATATGGCCTaGAGCTCCTCACTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTSLHMA*SSSLSS
Trigger: CGAGGACAGTGAGGAGCTGCAGGCCATATGCAAGCT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGTGGCCTGCTCCGGCTaGTTGTCTTCACGGACTCGA +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGVACSG*LSSRTR
Trigger: TCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCAC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCAAAATCCACAGCCTaGCACAGCAGATTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWSKSTA*HSRFAK
Trigger: TTTAGCAAATCTGCTGTGGCAGGCTGTGGATTTTGA...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCTTCCCTCCTGCTTCTaGCATCAGCCCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGLPSCF*HQPQFP
Trigger: GGGGAACTGGGGCTGATGGCAGAAGCAGGAGGGAAG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCATGGGGAACTGTCCATaGGAGAGGTGTCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTMGNCP*ERCQRG
Trigger: CCCTCTCTGACACCTCTCCCATGGACAGTTCCCCAT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTGGAGGCGTGGTGGGCTaGTCCCCGTCTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIGGVVG*SPSSPS
Trigger: GGAAGGAGAAGACGGGGACCAGCCCACCACGCCTCC...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTAGGTCTTTAGGGGCTTaGGAGGCGTGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPRSLGA*EAWWAG
Trigger: ACCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCT...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAGCTCCAGGCCCTGCTaGGGTGGCCCAAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSSRPC*GGPRWL
Trigger: CAACCACCTTGGGCCACCCCAGCAGGGCCTGGAGCT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGGCAGCATGAGCCTCTaGGTGCTGCGGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHGSMSL*VLRLFS
Trigger: CGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTAGTGAGCGGAGGTGGTaGCAGCATGAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPSERRW*QHEPLG
Trigger: ACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACT...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAATCCACCATGGCTGGTaGGAATTCTTGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPIHHGW*EFLARG
Trigger: CCCCCGGGCCAAGAATTCCCACCAGCCATGGTGGAT...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTTTCAGGGGAATCCCTaGGCTCAGCTTGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTFQGNP*AQLAVL
Trigger: GAGCACTGCAAGCTGAGCCCAGGGATTCCCCTGAAA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCCGCCTTCCAGGGCGTaGATCTGTGCCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPPPSRA*ICALCP
Trigger: CGGGCAGAGGGCACAGATCCACGCCCTGGAAGGCGG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTRVVST*NGWICF
Trigger: GAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTAAACACACCTGCACCTaGATCTCAGACGCATCCACC +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGKHTCT*ISDAST
Trigger: GGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTT...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCTGGGGTCCAGCCAGTaGTCGGGAATCACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHLGSSQ*SGITAP
Trigger: TGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCCTGGGGTCCAGCCAGTaGTCGGGAATCACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSLGSSQ*SGITAP
Trigger: TGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAG...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCCTCCCACACAGCGCTaGGGTCCAGCCAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPPPTQR*GPASGR
Trigger: CCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTCTCTTCCCTGGTGCGTaGAGCAGGCATGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPLFPGA*SRHGHE
Trigger: CTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAG...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCACCCTTTGCTCTTCCCTaGTGCGTGGAGCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPPFALP*CVEQAW
Trigger: CCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGG...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTCAGCACTATGTGCTATaGGGCACAGCACTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAQHYVL*GTALEN
Trigger: GTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTG...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGACGCTTCGGAATCCCTaGTGGGGAACTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGTLRNP*WGTVHG
Trigger: CCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCCACTTCAGCCTCTGTaGGGCTTTCTTTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLPLQPL*GFLSGS
Trigger: AGACCCCGAAAGAAAGCCTCACAGAGGCTGAAGTGG...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCCTGGGCCACTGCCTTaGGAAGGACACCATCACCCA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHPGPLP*EGHHHP
Trigger: TGGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGTTTCAGGACCTCGCTaGTGCCCCGGGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYVSGPR*CPGWDG
Trigger: CCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAAC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTTGCGTTTGCGGGTGGTaGGCACTTGGAATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPCVCGW*ALGMAG
Trigger: TCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCA...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CATCAACATCCAGGGTCTTCACCATCAGCCCCTCGCAGGAGTCTTTCACTGACTGCAGGAGTCTTTCACTaGCTGCTCCAGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: HQHPGSSPSAPRRSLSLTAGVFH*LLQELG
Trigger: GCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGC...AGTCAGTGAAAGACTCCTGCGAGGGGCTGATGGTGAAGACCCTGGATGTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR TCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTAGTCCTTCTTCAGCTTaGGCCAGTTGTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGSPSSA*ASCAIS
Trigger: AGAGATCGCACAACTGGCTCAAGCTGAAGAAGGACT...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGCCTTGAGGCTCTGGTaGTGCTCCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHALRLW*CSSSSS
Trigger: TGAGGAGCTGGAGGAGCATCACCAGAGCCTCAAGGC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCAGCACCAGCGCCTTaGGGCTCTGGTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPAAPAP*GSGDAP
Trigger: AGGAGCATCACCAGAGCCTCAAGGCGCTGGTGCTGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTTCCCTCGCCCTGGATaGGCGGGTGTGGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYFPRPG*AGVAEG
Trigger: ACCCTCAGCCACACCCGCTCATCCAGGGCGAGGGAA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS-3UTR TCA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATATCTCAATCTCTCACTaGCACACATTCCTGACATCT +
Preference number: 4 (lower is better)
Translates to: SPPTQRWGPASGRESQRHISISH*HTFLTS
Trigger: AGATGTCAGGAATGTGTGTCAGTGAGAGATTGAGAT...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTATCTCAATCTCTCACTaGCACACATTCCTGACATCT +
Preference number: 4 (lower is better)
Translates to: QRWGPASGRESQRHLSARISISH*HTFLTS
Trigger: AGATGTCAGGAATGTGTGTCAGTGAGAGATTGAGAT...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCGCTGCTTCCGAGCTGTaGGACGCTTCGGAATCCCTG +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSAASEL*DASESL
Trigger: CAGGGATTCCGAAGCGTCGCACAGCTCGGAAGCAGC...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCACCTCGCAGAACGTCTaGTTCAGGATCATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTTSQNV*FRIMPC
Trigger: GCAAGGCATGATCCTGAAGCAGACGTTCTGCGAGGT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGGCTCAGCTTGCAGTaGTCCGGGAGACGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPGLSLQ*SGRRSR
Trigger: CCTGGAACGTCTCCCGGAGCACTGCAAGCTGAGCCC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTCCCTGGGCTCAGCTTaGAGTGCTCCGGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSLGSA*SAPGDV
Trigger: AACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTTGGAATGGCTGGATCTaGTTCTTTTCCCGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGWNGWI*FFSRSQ
Trigger: TTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCA...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGTGGCCTGCTCCGGCTaGTTGTCTTCACGGACTCGA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHVACSG*LSSRTR
Trigger: TCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCAC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCGTGGCCTGCTCCGGCTaGTTGTCTTCACGGACTCGA +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSVACSG*LSSRTR
Trigger: TCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCAC...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGCACACTGGGAAAATaGCCGCGCTTTCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSTLGK*PRFPSP
Trigger: GGGCGAGGGAAAGCGCGGGCATTTTCCCAGTGTGCT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGGGTCCAACCCCCTTTaGTCTTCCCTGGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHGSNPL*SSLVRG
Trigger: TCCACGCACCAGGGAAGAGCAAAGGGGGTTGGACCC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR GCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTCTCAAATGTCACTACTaGGTGTCTCTGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGLKCHY*VSLGGT
Trigger: CGTACCACCCAGAGACACGCAGTAGTGACATTTGAG...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGGCCGCCTTCCTCCCTaGCCTCTTCACCGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPGRLPP*PLHRRV
Trigger: GACTCTCCGGTGAAGAGGCCAGGGAGGAAGGCGGCC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTGTTCTCAGGAGATGTaGCAGGACGGGGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHCSQEM*QDGAGR
Trigger: TCTCCCCGCCCCGTCCTGCCACATCTCCTGAGAACA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCTTGGGAGGCGTGGTaGGCTGGTCCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPAWEAW*AGPRLL
Trigger: GAGAAGACGGGGACCAGCCCACCACGCCTCCCAAGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGGTCTTTAGGGGCTTaGGAGGCGTGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHRSLGA*EAWWAG
Trigger: ACCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGACAGGGAGGAGGTCTaGAGGCGACAGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYDREEV*RRQGHH
Trigger: GTGGTGGCCCTGTCGCCTCCAGACCTCCTCCCTGTC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGACAGGGAGGAGGTCTaGAGGCGACAGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPDREEV*RRQGHH
Trigger: GTGGTGGCCCTGTCGCCTCCAGACCTCCTCCCTGTC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACAGCTCCAGGCCCTGCTaGGGTGGCCCAAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYSSRPC*GGPRWL
Trigger: CAACCACCTTGGGCCACCCCAGCAGGGCCTGGAGCT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATGCCGACCTGTGGCCTaGGCCACTGCCTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPCRPVA*ATALRR
Trigger: CCTTCTCAAGGCAGTGGCCCAGGCCACAGGTCGGCA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGTGAGCGGAGGTGGTaGCAGCATGAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSERRW*QHEPLG
Trigger: ACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCTGGTGGGAATTCTTaGCCCGGGGGCGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYAGGNS*PGGVRL
Trigger: GAGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCTGGTGGGAATTCTTaGCCCGGGGGCGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPAGGNS*PGGVRL
Trigger: GAGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCGGGATGGGCCAACATTaGTTTCAGGGGAATCCCTGG +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLGMGQH*FQGNPW
Trigger: CCAGGGATTCCCCTGAAACCAATGTTGGCCCATCCC...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGMPRVG*ANIGFR
Trigger: CCTGAAACCAATGTTGGCCCATCCCACCCGGGGCAT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGAAGGATGTGACCGATaGGAGTTTAATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAEGCDR*EFNLGD
Trigger: ATCCCCAAGATTAAACTCCCATCGGTCACATCCTTC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGAGCACTTGGAATGGCTaGATCTGCTTCTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQSTWNG*ICFFSR
Trigger: CCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCT...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCAAACACACCTGCACCTaGATCTCAGACGCATCCACC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTKHTCT*ISDAST
Trigger: GGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGTGGTGTCCAGGGAGGTaGCGAAGACAAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGWCPGR*RRQTRP
Trigger: AGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCA...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACCTGAGCACTGGTGGTaGCCTGCTCCGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPPEHWW*PAPAAC
Trigger: ACAAGCAGCCGGAGCAGGCCACCACCAGTGCTCAGG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACCTGAGCACTGGTaGTGGCCTGCTCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYPPEHW*WPAPAA
Trigger: AGCAGCCGGAGCAGGCCACCACCAGTGCTCAGGTGG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGAAAAGGGGTGAAGTaGGGCGAGCCCTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPGKGVK*GEPSRR
Trigger: TCTGCGGGAGGGCTCGCCCCACTTCACCCCTTTTCC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS-3UTR CCA 90 bp GTGGTGAGCACTTGGAATGGCTGGATCTGCTTCTTTTCCCGGTCCCAAGCCACGGGGATGGGCCAACATTaGTTTCAGGGGAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: VVSTWNGWICFFSRSQATGMGQH*FQGNPR
Trigger: TCTGGGATTCCCCTGAAACCAATGTTGGCCCATCCC...CGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCCAGGACCTTGCATATaGCCTGCAGCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLPGPCI*PAAPHC
Trigger: ACAGTGAGGAGCTGCAGGCCATATGCAAGGTCCTGG...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCTCTTCCCTGGTGCGTaGAGCAGGCATGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHLFPGA*SRHGHE
Trigger: CTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR CCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCACAGCCACGGGGAGCTaGTTCAGGACACAGCACTAT +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLTATGS*FRTQHY
Trigger: ATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGT...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACGCTTCGGAATCCCTaGTGGGGAACTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHTLRNP*WGTVHG
Trigger: CCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGGCCACCTCAGGCTCTaGAACGCTTTCCGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPGHLRL*NAFRRG
Trigger: ACCCCGACGGAAAGCGTTTCAGAGCCTGAGGTGGCC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGGCCACCTCAGGCTCTaGAACGCTTTCCGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYGHLRL*NAFRRG
Trigger: ACCCCGACGGAAAGCGTTTCAGAGCCTGAGGTGGCC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTGGAAGCACTGCCAGTaGGCCTGGCGATGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYWKHCQ*AWRCRG
Trigger: TCCGCGACATCGCCAGGCTCACTGGCAGTGCTTCCA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTGGAAGCACTGCCAGTaGGCCTGGCGATGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPWKHCQ*AWRCRG
Trigger: TCCGCGACATCGCCAGGCTCACTGGCAGTGCTTCCA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGATGAACCGGGCTTCTaGGTGGCGGCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPDEPGF*VAAGHK
Trigger: TTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCTTCCTGATTCCTGCTaGAGATCTTCACCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGLPDSC*RSSPPR
Trigger: GCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GTACTTCCCAGTGTTGTCTTCCTGATTCCTGCTGAAGATCTTCACCTCCCCGCCCTTCCTGATTCCTGCTaGAGATCTTCACCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VLPSVVFLIPAEDLHLPALPDSC*RSSPPR
Trigger: GCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAG...GGCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAGACAACACTGGGAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTGCGTTTGCGGGTGGTaGGCACTTGGAATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHCVCGW*ALGMAG
Trigger: TCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATACAAACAGGCCACCTaGGCACTGGTGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPYKQAT*ALVVAC
Trigger: GCAGGCCACCACCAGTGCTCAGGTGGCCTGTTTGTA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCTTCACAGGGGGATGTaGGCACCCCTCGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYLHRGM*APLGLG
Trigger: ACCCAGACCGAGGGGTGCTCACATCCCCCTGTGAAG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAACTGACACACATTCCTaGCATCTTTCTATCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRTDTHS*HLSIPA
Trigger: GGCTGGGATAGAAAGATGTCAGGAATGTGTGTCAGT...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTATCTCAATCTCTCACTaGCACACATTCCTGACATCT +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAISISH*HTFLTS
Trigger: AGATGTCAGGAATGTGTGTCAGTGAGAGATTGAGAT...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGAATTCTTTTCTTATGTaGGCCACCACTATTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RERSAHFTSHTALGSSQWNSFLM*ATTICS
Trigger: GCTACAAATAGTGGTGGCTCACATAAGAAAAGAATT...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGGGCATATACAACACTaGAAACAAAGTACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAGHIQH*KQSTSR
Trigger: CCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGGGGCTCCGTCTCTCTaGTGCTATTGGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHGAPSL*CYWMPP
Trigger: AGGAGGCATCCAATAGCAGCAGAGAGACGGAGCCCC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGTCCGTTTCGGGAGCTaGTTCCGAGCTGTGCGACGC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYVRFGS*FRAVRR
Trigger: GCGTCGCACAGCTCGGAAGCAGCTCCCGAAACGGAC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCGTCTTGGGAGCTCTaGGGGGAGGCTTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPASWEL*GEAWSA
Trigger: AGCAGACCAAGCCTCCCCGCAGAGCTCCCAAGACGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTGTGGCCTGGGCCACTaGCTTGAGAAGGACACCATC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHCGLGH*LEKDTI
Trigger: GATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTTCAGGATCATGCCTTaGTCCTCCAGCCACGTCTTT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTFRIMP*SSSHVF
Trigger: AAAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GTACTTCCCAGTGTTGTCTTCCTGATTCCTGCTGAAGATCTTCACCTCCCCGCCTCTGCTTCAGGATCATaGCTTGCTCCTCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: VLPSVVFLIPAEDLHLPASASGS*LAPPAT
Trigger: CGTGGCTGGAGGAGCAAGGCATGATCCTGAAGCAGA...GGCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAGACAACACTGGGAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTAGACGTTCCAGGCCGTaGTCCAGCAGCACGGGGATA +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIRRSRP*SSSTGI
Trigger: TATCCCCGTGCTGCTGGAGCACGGCCTGGAACGTCT...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGGGCTCAGCTTGCAGTaGTCCGGGAGACGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPGLSLQ*SGRRSR
Trigger: CCTGGAACGTCTCCCGGAGCACTGCAAGCTGAGCCC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTTCGCAGGTGAAAGCTaGCTCCTCAAAGCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTFAGES*LLKAFQ
Trigger: CTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTGGAATGGCTGGATCTaGTTCTTTTCCCGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTWNGWI*FFSRSQ
Trigger: TTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GTGGTGAGCACTTGGAATGGCTGGATCTGCTTCTTTTCCCGGTCCCAAGCCACGTGGAATGGCTGGATCTaGTTCTTTTCCCGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VVSTWNGWICFFSRSQATWNGWI*FFSRSQ
Trigger: TTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCA...CGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCGAGTCTTTCACTGACTaGTCCAGGAACTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLESFTD*SRNSAI
Trigger: GATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTC...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTGCGTTTGCGGGTGGTGAGCACTTGGAATGGCTGGATCTGCTTCTTTTCCCGGGAGTCTTTCACTGACTaGTCCAGGAACTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: LRLRVVSTWNGWICFFSRESFTD*SRNSAI
Trigger: GATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTC...CCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGTGGCCTGCTCCGGCTaGTTGTCTTCACGGACTCGA +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPVACSG*LSSRTR
Trigger: TCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCAC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCACTGGTGGTGGCCTaGTCCGGCTGCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPALVVA*SGCLSS
Trigger: TGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTTTGCTCTTCCCTGGTaGGTGGAGCAGGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHFALPW*VEQAWP
Trigger: TGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR CCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCTTCAGTGCCGCCTTTaGAGGGGGCTCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGILQCRL*RGLRLS
Trigger: AGAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAG...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGATGGGGAACTGTCCATaGGAGAGGTGTCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGMGNCP*ERCQRG
Trigger: CCCTCTCTGACACCTCTCCCATGGACAGTTCCCCAT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAGGTCTTTAGGGGCTTaGGAGGCGTGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPRSLGA*EAWWAG
Trigger: ACCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCATCGGGGTCTCTGCTTTaGAGGTCTTTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPSGSLL*RSLGAW
Trigger: CCAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGA...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAGCAGTTCCTGCTTCGTaGCCACCTCAGGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPAVPAS*PPQALK
Trigger: TTTCAGAGCCTGAGGTGGCCACGAAGCAGGAACTGC...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTGCCGACCTGTGGCCTaGGCCACTGCCTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYCRPVA*ATALRR
Trigger: CCTTCTCAAGGCAGTGGCCCAGGCCACAGGTCGGCA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGGCAGCATGAGCCTCTaGGTGCTGCGGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYGSMSL*VLRLFS
Trigger: CGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGGCAGCATGAGCCTCTaGGTGCTGCGGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPGSMSL*VLRLFS
Trigger: CGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAGTGAGCGGAGGTGGTaGCAGCATGAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSERRW*QHEPLG
Trigger: ACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPNRASE*RQATKR
Trigger: CCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGCATCCACCATGGCTaGTGGGAATTCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSIHHG*WEFLAR
Trigger: CCGGGCCAAGAATTCCCACCAGCCATGGTGGATGCT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCAGCATCCACCATGGCTaGTGGGAATTCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSSIHHG*WEFLAR
Trigger: CCGGGCCAAGAATTCCCACCAGCCATGGTGGATGCT...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCAGCACTTGGAATGGCTaGATCTGCTTCTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTSTWNG*ICFFSR
Trigger: CCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GATCTGCTTCTTTTCCCGGTCCCAAGCCACGGCTTCGGTGTCCAGGATGAAGGAAGCACTTGGAATGGCTaGATCTGCTTCTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: DLLLFPVPSHGFGVQDEGSTWNG*ICFFSR
Trigger: CCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCT...TCCTTCATCCTGGACACCGAAGCCGTGGCTTGGGACCGGGAAAAGAAGCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp TGTGCGATCTCTTGGCGATCTCGTAGGTGGCATCAACATCCAGGGTCTTCACCACGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CAISWRSRRWHQHPGSSPRVVST*NGWICF
Trigger: GAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCG...TGGTGAAGACCCTGGATGTTGATGCCACCTACGAGATCGCCAAGAGATCGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp TCAACATCCAGGGTCTTCACCATCAGCCCCTCGCAGGAGTCTTTCACTGACTGCAAACACACCTGCACCTaGATCTCAGACGCATCCACC +
Preference number: 4 (lower is better)
Translates to: STSRVFTISPSQESFTDCKHTCT*ISDAST
Trigger: GGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTT...GCAGTCAGTGAAAGACTCCTGCGAGGGGCTGATGGTGAAGACCCTGGATGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTGGTGTCCAGGGAGGTaGCGAAGACAAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHWCPGR*RRQTRP
Trigger: AGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTCTGCTCGATGTCCTTaGTGTCCAGGGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSARCP*CPGRWR
Trigger: TCGCCACCTCCCTGGACACCAAGGACATCGAGCAGA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTTCCAAGCTTGCATATaGCCTGCAGCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTFQACI*PAAPHC
Trigger: ACAGTGAGGAGCTGCAGGCCATATGCAAGCTTGGAA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCTGGGGTCCAGCCAGTaGTCGGGAATCACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPLGSSQ*SGITAP
Trigger: TGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGGTGGAAAAATGACATaGTACTTCGCTGCATGTTGG +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRGGKMT*YFAACW
Trigger: CCAACATGCAGCGAAGTATCATGTCATTTTTCCACC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTCTTCCAGGACTTCCTaGATGGTCCGTTTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSSRTS*MVRFGS
Trigger: GCTCCCGAAACGGACCATTCAGGAAGTCCTGGAAGA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCTGGGCCACTGCCTTaGGAAGGACACCATCACCCA +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYPGPLP*EGHHHP
Trigger: TGGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGATGAACCGGGCTTCTaGGTGGCGGCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPDEPGF*VAAGHK
Trigger: TTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCATTTGTATTCGCAGGTaGAAGCTGCCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTICIRR*KLPPQS
Trigger: GCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAAT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp GTCCTTGGTGTCCAGGGAGGTGGCGAAGACAAACTCGCCCTCTGTCTCCACAAAATTTGTATTCGCAGGTaGAAGCTGCCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: VLGVQGGGEDKLALCLHKICIRR*KLPPQS
Trigger: GCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAAT...TTTGTGGAGACAGAGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCTTCCTGATTCCTGCTaGAGATCTTCACCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHLPDSC*RSSPPR
Trigger: GCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp GTCCTTGGTGTCCAGGGAGGTGGCGAAGACAAACTCGCCCTCTGTCTCCACAAACCAGTGTTGTCTTCCTaGTTCCTGCTGAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: VLGVQGGGEDKLALCLHKPVLSS*FLLKIF
Trigger: GAAGATCTTCAGCAGGAATCAGGAAGACAACACTGG...TTTGTGGAGACAGAGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR TCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATGCGTTTGCGGGTGGTaGGCACTTGGAATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPCVCGW*ALGMAG
Trigger: TCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCAGGAGTCTTTCACTaGCTGCTCCAGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPAGVFH*LLQELG
Trigger: GCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTGCAGGAGTCTTTCACTaGCTGCTCCAGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIAGVFH*LLQELG
Trigger: GCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGC...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCCTTGAGGCTCTGGTaGTGCTCCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPALRLW*CSSSSS
Trigger: TGAGGAGCTGGAGGAGCATCACCAGAGCCTCAAGGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCCTTGAGGCTCTGGTaGTGCTCCTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYALRLW*CSSSSS
Trigger: TGAGGAGCTGGAGGAGCATCACCAGAGCCTCAAGGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTACAAACAGGCCACCTaGGCACTGGTGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYYKQAT*ALVVAC
Trigger: GCAGGCCACCACCAGTGCTCAGGTGGCCTGTTTGTA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCTTCAGGGTCAGAGCCTaGGTCCTCGCCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSFRVRA*VLALLV
Trigger: AACCAACAAGGCGAGGACTCAGGCTCTGACCCTGAA...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGTGTGGCTGAGGGTCTaGGGAGTGACTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYVWLRV*GVTGRE
Trigger: TTCCCTGCCAGTCACTCCTCAGACCCTCAGCCACAC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS-3UTR TCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTGGGAGAGGAGGAACCTaGATCCCTAATGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPGRGGT*IPNGIR
Trigger: TCTGATGCCATTAGGGATTCAGGTTCCTCCTCTCCC...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGGGCTCCGTCTCTCTaGTGCTATTGGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPGAPSL*CYWMPP
Trigger: AGGAGGCATCCAATAGCAGCAGAGAGACGGAGCCCC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCTGCTTCCGAGCTGTaGGACGCTTCGGAATCCCTG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYAASEL*DASESL
Trigger: CAGGGATTCCGAAGCGTCGCACAGCTCGGAAGCAGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCGGGGAGGCTTGGTCTaGTCTTCCTCCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPRGGLV*SSSSCS
Trigger: ACTGCAGGAGGAGGAAGAGCAGACCAAGCCTCCCCG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCGGAGCGCAGCAAGTTaGTCAGCGTCTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPRSAAS*SASPPS
Trigger: GGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTCTGCTTCAGGATCATaGCTTGCTCCTCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSASGS*LAPPAT
Trigger: CGTGGCTGGAGGAGCAAGGCATGATCCTGAAGCAGA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCTCTGCTTCAGGATCATaGCTTGCTCCTCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSSASGS*LAPPAT
Trigger: CGTGGCTGGAGGAGCAAGGCATGATCCTGAAGCAGA...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAGACGTTCCAGGCCGTaGTCCAGCAGCACGGGGATA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPRRSRP*SSSTGI
Trigger: TATCCCCGTGCTGCTGGAGCACGGCCTGGAACGTCT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CAACATCCAGGGTCTTCACCATCAGCCCCTCGCAGGAGTCTTTCACTGACTGCTTTCGCAGGTGAAAGCTaGCTCCTCAAAGCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: QHPGSSPSAPRRSLSLTAFAGES*LLKAFQ
Trigger: CTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAA...AGCAGTCAGTGAAAGACTCCTGCGAGGGGCTGATGGTGAAGACCCTGGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCAGGGCGTGGATCTGTaGCCTCTGCCCGTCATATTT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHQGVDL*PLPVIF
Trigger: AAATATGACGGGCAGAGGGCACAGATCCACGCCCTG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCCAGGGCGTGGATCTGTaGCCTCTGCCCGTCATATTT +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSQGVDL*PLPVIF
Trigger: AAATATGACGGGCAGAGGGCACAGATCCACGCCCTG...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTTGGGGATGCGGCTGATGATGTCCGGGTACTTCCCAGTGTTGTCTTCCTGATTGCGTACAAACACACCTaGACCTGGATCTCAGACGCA +
Preference number: 4 (lower is better)
Translates to: LGDAADDVRVLPSVVFLIAYKHT*TWISDA
Trigger: TGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTACGC...AATCAGGAAGACAACACTGGGAAGTACCCGGACATCATCAGCCGCATCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAAGCTTGAGCCAGTTGTaGGATCTCTTGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPSLSQL*DLLAIS
Trigger: CGAGATCGCCAAGAGATCGCACAACTGGCTCAAGCT...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCACTGGTGGTGGCCTaGTCCGGCTGCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPALVVA*SGCLSS
Trigger: TGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCCATGATACTTCGCTaGATGTTGGCGTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTAMILR*MLASEF
Trigger: GAATTCTGACGCCAACATGCAGCGAAGTATCATGGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427526.6
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGGTCTCTGCTTCTGTaGGACGCTTCGGAATCCCTG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPGSLLL*DASESL
Trigger: CAGGGATTCCGAAGCGTCGCACAGAAGCAGAGACCC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATCCAGGGCAGGCTTCTaGCCTTTAGCAGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSRAGF*PLAGLR
Trigger: CCTTAGCCCTGCTAAAGGCCAGAAGCCTGCCCTGGA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACATGGGGAACTGTCCATaGGAGAGGTGTCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHMGNCP*ERCQRG
Trigger: CCCTCTCTGACACCTCTCCCATGGACAGTTCCCCAT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTCGGGGTCTCTGCTTTaGAGGTCTTTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSGSLL*RSLGAW
Trigger: CCAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTAGGATTGTAACCAGATaGATCCAGGGGTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPRIVTR*IQGSLS
Trigger: GCTGAGGGACCCCTGGATCCATCTGGTTACAATCCT...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPNRASE*RQATKR
Trigger: CCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTATCCACCATGGCTGGTaGGAATTCTTGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPIHHGW*EFLARG
Trigger: CCCCCGGGCCAAGAATTCCCACCAGCCATGGTGGAT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAGCATCCACCATGGCTaGTGGGAATTCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSIHHG*WEFLAR
Trigger: CCGGGCCAAGAATTCCCACCAGCCATGGTGGATGCT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTAGCATCCACCATGGCTaGTGGGAATTCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGISIHHG*WEFLAR
Trigger: CCGGGCCAAGAATTCCCACCAGCCATGGTGGATGCT...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTTTCAGGGGAATCCCTaGGCTCAGCTTGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHFQGNP*AQLAVL
Trigger: GAGCACTGCAAGCTGAGCCCAGGGATTCCCCTGAAA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGAAGGATGTGACCGATaGGAGTTTAATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINREGCDR*EFNLGD
Trigger: ATCCCCAAGATTAAACTCCCATCGGTCACATCCTTC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGGTGAGCACTTGGAATaGCTGGATCTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTGEHLE*LDLLLF
Trigger: GAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGAAACACACCTGCACCTaGATCTCAGACGCATCCACC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGKHTCT*ISDAST
Trigger: GGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGTGGCGATCTCGTAGGTaGCATCAACATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGWRSRR*HQHPGS
Trigger: AGACCCTGGATGTTGATGCCACCTACGAGATCGCCA...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACACGCTTCGGAATCCCTaGTGGGGAACTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYTLRNP*WGTVHG
Trigger: CCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTACGCTTCGGAATCCCTaGTGGGGAACTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPTLRNP*WGTVHG
Trigger: CCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCATTTGTATTCGCAGGTaGAAGCTGCCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLICIRR*KLPPQS
Trigger: GCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAAT...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTGCGTTTGCGGGTGGTaGGCACTTGGAATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPCVCGW*ALGMAG
Trigger: TCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCAGGAGTCTTTCACTaGCTGCTCCAGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYAGVFH*LLQELG
Trigger: GCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATTCAGGGTCAGAGCCTaGGTCCTCGCCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPFRVRA*VLALLV
Trigger: AACCAACAAGGCGAGGACTCAGGCTCTGACCCTGAA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACATGGGGCACAGCACTTaGAAACTCTTGTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHMGHST*KLLCGH
Trigger: ATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCAT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR TCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCATGGGGCACAGCACTTaGAAACTCTTGTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSMGHST*KLLCGH
Trigger: ATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCAT...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGGGGCTCCGTCTCTCTaGTGCTATTGGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPGAPSL*CYWMPP
Trigger: AGGAGGCATCCAATAGCAGCAGAGAGACGGAGCCCC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTATTCCACTCCTTCAGTaGCGCCTTTGGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPIPLLQ*RLWRGL
Trigger: GAGCCCCCTCCAAAGGCGGCACTGAAGGAGTGGAAT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACATTCCACTCCTTCAGTaGCGCCTTTGGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYIPLLQ*RLWRGL
Trigger: GAGCCCCCTCCAAAGGCGGCACTGAAGGAGTGGAAT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTGTGGCCTGGGCCACTaGCTTGAGAAGGACACCATC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYCGLGH*LEKDTI
Trigger: GATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTGTGGCCTGGGCCACTaGCTTGAGAAGGACACCATC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPCGLGH*LEKDTI
Trigger: GATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATACGGACGGACTCCAGCTaGCGACCTGTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIRTDSS*RPVAWA
Trigger: GGCCCAGGCCACAGGTCGGCAGCTGGAGTCCGTCCG...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGTTCAGGATCATGCCTTaGTCCTCCAGCCACGTCTTT +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGFRIMP*SSSHVF
Trigger: AAAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAA...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCATTCAGGATCATGCCTTaGTCCTCCAGCCACGTCTTT +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPFRIMP*SSSHVF
Trigger: AAAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAA...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCATTCGCAGGTGAAAGCTaGCTCCTCAAAGCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPFAGES*LLKAFQ
Trigger: CTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAA...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCTGGATCTGTGCCCTCTaGCCGTCATATTTGTATTCG +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLWICAL*PSYLYS
Trigger: CGAATACAAATATGACGGGCAGAGGGCACAGATCCA...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TACAAACACACCTGCACCTGGATCTCAGACGCATCCACCTCCTTGCGTTTGCGGTGGATCTGTGCCCTCTaGCCGTCATATTTGTATTCG +
Preference number: 4 (lower is better)
Translates to: YKHTCTWISDASTSLRLRWICAL*PSYLYS
Trigger: CGAATACAAATATGACGGGCAGAGGGCACAGATCCA...CCGCAAACGCAAGGAGGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACAGGGCGTGGATCTGTaGCCTCTGCCCGTCATATTT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPQGVDL*PLPVIF
Trigger: AAATATGACGGGCAGAGGGCACAGATCCACGCCCTG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGTGGAATGGCTGGATCTaGTTCTTTTCCCGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGWNGWI*FFSRSQ
Trigger: TTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCA...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGCGTACAAACACACCTaGACCTGGATCTCAGACGCA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHAYKHT*TWISDA
Trigger: TGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTACGC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCGCGTACAAACACACCTaGACCTGGATCTCAGACGCA +
Preference number: 4 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSAYKHT*TWISDA
Trigger: TGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTACGC...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAGGAACTCGGCGATCTaGTCGATGTCCTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPRNSAI*SMSLVS
Trigger: GGACACCAAGGACATCGAGCAGATCGCCGAGTTCCT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAGCTTGCATATGGCCTaGAGCTCCTCACTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSLHMA*SSSLSS
Trigger: CGAGGACAGTGAGGAGCTGCAGGCCATATGCAAGCT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGCCAGTTCCAAGCTTaGATATGGCCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSQFQA*IWPAAP
Trigger: AGGAGCTGCAGGCCATATGCAAGCTTGGAACTGGCT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR GCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTTCAAAATCCACAGCCTaGCACAGCAGATTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGSKSTA*HSRFAK
Trigger: TTTAGCAAATCTGCTGTGGCAGGCTGTGGATTTTGA...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GTGGATCTGTGCCCTCTGCCCGTCATATTTGTATTCGCAGGTGAAAGCTGCCTCGAATCCCAGAACGTCTaGTTCAGGATCATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: VDLCPLPVIFVFAGESCLESQNV*FRIMPC
Trigger: GCAAGGCATGATCCTGAAGCAGACGTTCTGGGATTC...GAGGCAGCTTTCACCTGCGAATACAAATATGACGGGCAGAGGGCACAGATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAACCTTGCATATGGCCTaGAGCTCCTCACTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPTLHMA*SSSLSS
Trigger: CGAGGACAGTGAGGAGCTGCAGGCCATATGCAAGGT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTACCTTGCATATGGCCTaGAGCTCCTCACTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGITLHMA*SSSLSS
Trigger: CGAGGACAGTGAGGAGCTGCAGGCCATATGCAAGGT...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTCTAATGGCATCAGACTaGCCCCTCCACACTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPLMASD*PLHTSH
Trigger: ATGAGAAGTGTGGAGGGGGCAGTCTGATGCCATTAG...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCTCAAATGTCACTACTaGGTGTCTCTGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGLKCHY*VSLGGT
Trigger: CGTACCACCCAGAGACACGCAGTAGTGACATTTGAG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTCCAGGGCAGGCTTCTaGCCTTTAGCAGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSRAGF*PLAGLR
Trigger: CCTTAGCCCTGCTAAAGGCCAGAAGCCTGCCCTGGA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCAGTTCCTGCTTCGTaGCCACCTCAGGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPAVPAS*PPQALK
Trigger: TTTCAGAGCCTGAGGTGGCCACGAAGCAGGAACTGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGGATTGTAACCAGATaGATCCAGGGGTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHRIVTR*IQGSLS
Trigger: GCTGAGGGACCCCTGGATCCATCTGGTTACAATCCT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATCCCAGCATCCACCATaGCTGGTGGGAATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSQHPP*LVGILG
Trigger: GCCAAGAATTCCCACCAGCCATGGTGGATGCTGGGA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGGATGGGCCAACATTaGTTTCAGGGGAATCCCTGG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPGMGQH*FQGNPW
Trigger: CCAGGGATTCCCCTGAAACCAATGTTGGCCCATCCC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYMPRVG*ANIGFR
Trigger: CCTGAAACCAATGTTGGCCCATCCCACCCGGGGCAT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGAAGGATGTGACCGATaGGAGTTTAATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTEGCDR*EFNLGD
Trigger: ATCCCCAAGATTAAACTCCCATCGGTCACATCCTTC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp TTGCGTTTGCGGGTGGTGAGCACTTGGAATGGCTGGATCTGCTTCTTTTCCCGGGGTGAGCACTTGGAATaGCTGGATCTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LRLRVVSTWNGWICFFSRGEHLE*LDLLLF
Trigger: GAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACC...CCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPRVVST*NGWICF
Trigger: GAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTGGTGTCCAGGGAGGTaGCGAAGACAAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYWCPGR*RRQTRP
Trigger: AGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACCA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTCTGCTCGATGTCCTTaGTGTCCAGGGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYSARCP*CPGRWR
Trigger: TCGCCACCTCCCTGGACACCAAGGACATCGAGCAGA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTGGCGATCTCGTAGGTaGCATCAACATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHWRSRR*HQHPGS
Trigger: AGACCCTGGATGTTGATGCCACCTACGAGATCGCCA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GTACTTCCCAGTGTTGTCTTCCTGATTCCTGCTGAAGATCTTCACCTCCCCGCCAGTTGTGCGATCTCTTaGCGATCTCGTAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VLPSVVFLIPAEDLHLPASCAIS*RSRRWH
Trigger: ATGCCACCTACGAGATCGCCAAGAGATCGCACAACT...GGCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAGACAACACTGGGAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGAGTTGTGCGATCTCTTaGCGATCTCGTAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGSCAIS*RSRRWH
Trigger: ATGCCACCTACGAGATCGCCAAGAGATCGCACAACT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCGCACGTAAGGGCGTaGGCTGGGCAGCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLPHVRA*AGQHQR
Trigger: GCGCTGGTGCTGCCCAGCCCACGCCCTTACGTGCGG...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTCCCGCAGAGCACACTaGGAAAATGCCCGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYSRRAH*ENARAF
Trigger: GAAAGCGCGGGCATTTTCCCAGTGTGCTCTGCGGGA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCAGAAGGTGTTCACTaGCTGAGGCTGACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPAEGVH*LRLTQG
Trigger: ACCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTCTTCCAGGACTTCCTaGATGGTCCGTTTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSSRTS*MVRFGS
Trigger: GCTCCCGAAACGGACCATTCAGGAAGTCCTGGAAGA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACTTCAGCCTCTGTaGGGCTTTCTTTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYPLQPL*GFLSGS
Trigger: AGACCCCGAAAGAAAGCCTCACAGAGGCTGAAGTGG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCCACTTCAGCCTCTGTaGGGCTTTCTTTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPPLQPL*GFLSGS
Trigger: AGACCCCGAAAGAAAGCCTCACAGAGGCTGAAGTGG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR TCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTATTTGTATTCGCAGGTaGAAGCTGCCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPICIRR*KLPPQS
Trigger: GCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAAT...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCACCAGTGTTGTCTTCCTaGTTCCTGCTGAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPPVLSS*FLLKIF
Trigger: GAAGATCTTCAGCAGGAATCAGGAAGACAACACTGG...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGTCCTTCTTCAGCTTaGGCCAGTTGTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSPSSA*ASCAIS
Trigger: AGAGATCGCACAACTGGCTCAAGCTGAAGAAGGACT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCCAGCTCCTCATCACTaGAGCCAGTTCCAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPPAPHH*SQFQAC
Trigger: GCAAGCTTGGAACTGGCTTCAGTGATGAGGAGCTGG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTTCAGGGTCAGAGCCTaGGTCCTCGCCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYFRVRA*VLALLV
Trigger: AACCAACAAGGCGAGGACTCAGGCTCTGACCCTGAA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTTCAGGGTCAGAGCCTaGGTCCTCGCCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPFRVRA*VLALLV
Trigger: AACCAACAAGGCGAGGACTCAGGCTCTGACCCTGAA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGGAGAGGAGGAACCTaGATCCCTAATGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPGRGGT*IPNGIR
Trigger: TCTGATGCCATTAGGGATTCAGGTTCCTCCTCTCCC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAATGAGCAACAGAACTTaGGCAGAAGGTGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPMSNRT*AEGVHW
Trigger: CCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCAT...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCTCCGTCTCTCTGCTaGTATTGGATGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPAPSLC*YWMPPS
Trigger: AGAAGGAGGCATCCAATAGCAGCAGAGAGACGGAGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAACCTCGCAGAACGTCTaGTTCAGGATCATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPTSQNV*FRIMPC
Trigger: GCAAGGCATGATCCTGAAGCAGACGTTCTGCGAGGT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTTCGCAGGTGAAAGCTaGCTCCTCAAAGCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHFAGES*LLKAFQ
Trigger: CTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTTGGATCTGTGCCCTCTaGCCGTCATATTTGTATTCG +
Preference number: 4 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPWICAL*PSYLYS
Trigger: CGAATACAAATATGACGGGCAGAGGGCACAGATCCA...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCAGGGCGTGGATCTGTaGCCTCTGCCCGTCATATTT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPQGVDL*PLPVIF
Trigger: AAATATGACGGGCAGAGGGCACAGATCCACGCCCTG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCGTACAAACACACCTaGACCTGGATCTCAGACGCA +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPAYKHT*TWISDA
Trigger: TGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTACGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGAGTCTTTCACTGACTaGTCCAGGAACTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPESFTD*SRNSAI
Trigger: GATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAGCTTGAGCCAGTTGTaGGATCTCTTGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSLSQL*DLLAIS
Trigger: CGAGATCGCCAAGAGATCGCACAACTGGCTCAAGCT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACAGCTTGCATATGGCCTaGAGCTCCTCACTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYSLHMA*SSSLSS
Trigger: CGAGGACAGTGAGGAGCTGCAGGCCATATGCAAGCT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR GCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGTCCTGTTGCCATATTaGTTAAGGGCATATACAACA +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRVLLPY*LRAYTT
Trigger: TGTTGTATATGCCCTTAAGCAATATGGCAACAGGAC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTGGACACAGCACTATGTaGTATGGGGCACAGCACTTG +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIGHSTM*YGAQHL
Trigger: CAAGTGCTGTGCCCCATAGCACATAGTGCTGTGTCC...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGACTTCCTGAATaGTCCGTTTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYPGLPE*SVSGAA
Trigger: AGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCCAGGACTTCCTGAATaGTCCGTTTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPPGLPE*SVSGAA
Trigger: AGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTCGGGGTCTCTGCTTTaGAGGTCTTTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSGSLL*RSLGAW
Trigger: CCAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCAGTTCCTGCTTCGTaGCCACCTCAGGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYAVPAS*PPQALK
Trigger: TTTCAGAGCCTGAGGTGGCCACGAAGCAGGAACTGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAGGATTGTAACCAGATaGATCCAGGGGTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPRIVTR*IQGSLS
Trigger: GCTGAGGGACCCCTGGATCCATCTGGTTACAATCCT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTCCCAGCATCCACCATaGCTGGTGGGAATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYSQHPP*LVGILG
Trigger: GCCAAGAATTCCCACCAGCCATGGTGGATGCTGGGA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTCCCAGCATCCACCATaGCTGGTGGGAATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSQHPP*LVGILG
Trigger: GCCAAGAATTCCCACCAGCCATGGTGGATGCTGGGA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTTTCAGGGGAATCCCTaGGCTCAGCTTGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPFQGNP*AQLAVL
Trigger: GAGCACTGCAAGCTGAGCCCAGGGATTCCCCTGAAA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGGGATGGGCCAACATTaGTTTCAGGGGAATCCCTGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPGMGQH*FQGNPW
Trigger: CCAGGGATTCCCCTGAAACCAATGTTGGCCCATCCC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGGGATGGGCCAACATTaGTTTCAGGGGAATCCCTGG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYGMGQH*FQGNPW
Trigger: CCAGGGATTCCCCTGAAACCAATGTTGGCCCATCCC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATACCGCCTTCCAGGGCGTaGATCTGTGCCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIPPSRA*ICALCP
Trigger: CGGGCAGAGGGCACAGATCCACGCCCTGGAAGGCGG...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGGTGAGCACTTGGAATaGCTGGATCTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGGEHLE*LDLLLF
Trigger: GAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCGGGTGGTGAGCACTTaGAATGGCTGGATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYRVVST*NGWICF
Trigger: GAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTTGGCGATCTCGTAGGTaGCATCAACATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIWRSRR*HQHPGS
Trigger: AGACCCTGGATGTTGATGCCACCTACGAGATCGCCA...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAGTTGTGCGATCTCTTaGCGATCTCGTAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSCAIS*RSRRWH
Trigger: ATGCCACCTACGAGATCGCCAAGAGATCGCACAACT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATACCTCCCACACAGCGCTaGGGTCCAGCCAGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIPPTQR*GPASGR
Trigger: CCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGG...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCAGAAGGTGTTCACTaGCTGAGGCTGACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPAEGVH*LRLTQG
Trigger: ACCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCTAGGGGTGAGCCATaGAGCAAAGTGATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPARGEP*SKVMSN
Trigger: GTTGCTCATCACTTTGCTCCATGGCTCACCCCTAGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCCAGTGTTGTCTTCCTaGTTCCTGCTGAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHPVLSS*FLLKIF
Trigger: GAAGATCTTCAGCAGGAATCAGGAAGACAACACTGG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAGTCCTTCTTCAGCTTaGGCCAGTTGTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSPSSA*ASCAIS
Trigger: AGAGATCGCACAACTGGCTCAAGCTGAAGAAGGACT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAAAGAAATGACGGGATaGATCCCAGACTCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHKEMTG*IPDSGV
Trigger: TACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTAATTCTTTTCTTATGTaGGCCACCACTATTTGTAGC +
Preference number: 4 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGNSFLM*ATTICS
Trigger: GCTACAAATAGTGGTGGCTCACATAAGAAAAGAATT...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGTGGTACGATTCTAGGTaGTATTTTGTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQWYDSR*YFVLFL
Trigger: CAGAAACAGAACAAAATATCACCTAGAATCGTACCA...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGACATGATACTTCGCTaGATGTTGGCGTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGDMILR*MLASEF
Trigger: GAATTCTGACGCCAACATGCAGCGAAGTATCATGTC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTCTGCTGCTATTGGATaGCTCCTTCTCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSAAIG*LLLRLL
Trigger: AAGAAGCCTGAGAAGGAGGCATCCAATAGCAGCAGA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCTCCGTCTCTCTGCTaGTATTGGATGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPAPSLC*YWMPPS
Trigger: AGAAGGAGGCATCCAATAGCAGCAGAGAGACGGAGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATTCAGGATCATGCCTTaGTCCTCCAGCCACGTCTTT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPFRIMP*SSSHVF
Trigger: AAAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTTTCAGGATCATGCCTTaGTCCTCCAGCCACGTCTTT +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIFRIMP*SSSHVF
Trigger: AAAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAA...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTACCTCGCAGAACGTCTaGTTCAGGATCATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPTSQNV*FRIMPC
Trigger: GCAAGGCATGATCCTGAAGCAGACGTTCTGCGAGGT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACACCTCGCAGAACGTCTaGTTCAGGATCATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYTSQNV*FRIMPC
Trigger: GCAAGGCATGATCCTGAAGCAGACGTTCTGCGAGGT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGAGTCTTTCACTGACTaGTCCAGGAACTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPESFTD*SRNSAI
Trigger: GATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGAGTCTTTCACTGACTaGTCCAGGAACTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYESFTD*SRNSAI
Trigger: GATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACAGCTTGAGCCAGTTGTaGGATCTCTTGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYSLSQL*DLLAIS
Trigger: CGAGATCGCCAAGAGATCGCACAACTGGCTCAAGCT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAGCTTGAGCCAGTTGTaGGATCTCTTGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSLSQL*DLLAIS
Trigger: CGAGATCGCCAAGAGATCGCACAACTGGCTCAAGCT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAGCCAGTTCCAAGCTTaGATATGGCCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSQFQA*IWPAAP
Trigger: AGGAGCTGCAGGCCATATGCAAGCTTGGAACTGGCT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACAGCCAGTTCCAAGCTTaGATATGGCCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYSQFQA*IWPAAP
Trigger: AGGAGCTGCAGGCCATATGCAAGCTTGGAACTGGCT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGGCCGCCTTCCTCCCTaGCCTCTTCACCGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLGRLPP*PLHRRV
Trigger: GACTCTCCGGTGAAGAGGCCAGGGAGGAAGGCGGCC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACAGGATTGTAACCAGATaGATCCAGGGGTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYRIVTR*IQGSLS
Trigger: GCTGAGGGACCCCTGGATCCATCTGGTTACAATCCT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAGGATTGTAACCAGATaGATCCAGGGGTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPRIVTR*IQGSLS
Trigger: GCTGAGGGACCCCTGGATCCATCTGGTTACAATCCT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGATGATAGTTGTTCTTaGCAGGATTGTAACCAGATG +
Preference number: 4 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTDDSCS*QDCNQM
Trigger: CATCTGGTTACAATCCTGCCAAGAACAACTATCATC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATAGACAGGGAGGAGGTCTaGAGGCGACAGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIDREEV*RRQGHH
Trigger: GTGGTGGCCCTGTCGCCTCCAGACCTCCTCCCTGTC...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGCTGGTGGGAATTCTTaGCCCGGGGGCGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLAGGNS*PGGVRL
Trigger: GAGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GATGGGAGTTTAATCTTGGGGATGCGGCTGATGATGTCCGGGTACTTCCCAGTGGAAGGATGTGACCGATaGGAGTTTAATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: DGSLILGMRLMMSGYFPVEGCDR*EFNLGD
Trigger: ATCCCCAAGATTAAACTCCCATCGGTCACATCCTTC...CACTGGGAAGTACCCGGACATCATCAGCCGCATCCCCAAGATTAAACTCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGAAGGATGTGACCGATaGGAGTTTAATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGEGCDR*EFNLGD
Trigger: ATCCCCAAGATTAAACTCCCATCGGTCACATCCTTC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTAGCACTTGGAATGGCTaGATCTGCTTCTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGISTWNG*ICFFSR
Trigger: CCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCT...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAAACACACCTGCACCTaGATCTCAGACGCATCCACC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPKHTCT*ISDAST
Trigger: GGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTGGCGATCTCGTAGGTaGCATCAACATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPWRSRR*HQHPGS
Trigger: AGACCCTGGATGTTGATGCCACCTACGAGATCGCCA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTGGCGATCTCGTAGGTaGCATCAACATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYWRSRR*HQHPGS
Trigger: AGACCCTGGATGTTGATGCCACCTACGAGATCGCCA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATTCCAAGCTTGCATATaGCCTGCAGCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPFQACI*PAAPHC
Trigger: ACAGTGAGGAGCTGCAGGCCATATGCAAGCTTGGAA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCTAGGGGTGAGCCATaGAGCAAAGTGATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYARGEP*SKVMSN
Trigger: GTTGCTCATCACTTTGCTCCATGGCTCACCCCTAGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAAAGACCCAAATTTGTTaGAGAGGGGAATATAGGAAA +
Preference number: 4 (lower is better)
Translates to: ALVVACSGCLSSRTRINRKTQIC*RGEYRK
Trigger: TTTCCTATATTCCCCTCTCCAACAAATTTGGGTCTT...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGGCCACCTCAGGCTCTaGAACGCTTTCCGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLGHLRL*NAFRRG
Trigger: ACCCCGACGGAAAGCGTTTCAGAGCCTGAGGTGGCC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAATTTGTATTCGCAGGTaGAAGCTGCCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPICIRR*KLPPQS
Trigger: GCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAAT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTACTGACACACATTCCTaGCATCTTTCTATCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGITDTHS*HLSIPA
Trigger: GGCTGGGATAGAAAGATGTCAGGAATGTGTGTCAGT...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGACATGATACTTCGCTaGATGTTGGCGTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHDMILR*MLASEF
Trigger: GAATTCTGACGCCAACATGCAGCGAAGTATCATGTC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATCTGCTGCTATTGGATaGCTCCTTCTCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSAAIG*LLLRLL
Trigger: AAGAAGCCTGAGAAGGAGGCATCCAATAGCAGCAGA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTC +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKVAFLG*LSPDGL
Trigger: GAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGAC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTTCAGGATCATGCCTTaGTCCTCCAGCCACGTCTTT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYFRIMP*SSSHVF
Trigger: AAAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTTCGCAGGTGAAAGCTaGCTCCTCAAAGCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYFAGES*LLKAFQ
Trigger: CTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATGGATCTGTGCCCTCTaGCCGTCATATTTGTATTCG +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPWICAL*PSYLYS
Trigger: CGAATACAAATATGACGGGCAGAGGGCACAGATCCA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTGGAATGGCTGGATCTaGTTCTTTTCCCGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPWNGWI*FFSRSQ
Trigger: TTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCTAATGGCATCAGACTaGCCCCTCCACACTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYLMASD*PLHTSH
Trigger: ATGAGAAGTGTGGAGGGGGCAGTCTGATGCCATTAG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATACTTCGCTGCATGTTaGCGTCAGAATTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPYFAAC*RQNSPF
Trigger: GAAGGGAGAATTCTGACGCCAACATGCAGCGAAGTA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGCTTGGGAGGCGTGGTaGGCTGGTCCCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKAWEAW*AGPRLL
Trigger: GAGAAGACGGGGACCAGCCCACCACGCCTCCCAAGC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCGATGATAGTTGTTCTTaGCAGGATTGTAACCAGATG +
Preference number: 4 (lower is better)
Translates to: STPRSGLCNRKYPRESNLDDSCS*QDCNQM
Trigger: CATCTGGTTACAATCCTGCCAAGAACAACTATCATC...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGGCAGCATGAGCCTCTaGGTGCTGCGGCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLGSMSL*VLRLFS
Trigger: CGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACAGCACTTGGAATGGCTaGATCTGCTTCTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYSTWNG*ICFFSR
Trigger: CCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACAGTTGTGCGATCTCTTaGCGATCTCGTAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYSCAIS*RSRRWH
Trigger: ATGCCACCTACGAGATCGCCAAGAGATCGCACAACT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAGTTGTGCGATCTCTTaGCGATCTCGTAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSCAIS*RSRRWH
Trigger: ATGCCACCTACGAGATCGCCAAGAGATCGCACAACT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTTCCAAGCTTGCATATaGCCTGCAGCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYFQACI*PAAPHC
Trigger: ACAGTGAGGAGCTGCAGGCCATATGCAAGCTTGGAA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR CCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGCACTATGTGCTATaGGGCACAGCACTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIQHYVL*GTALEN
Trigger: GTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTG...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACATTTGTATTCGCAGGTaGAAGCTGCCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYICIRR*KLPPQS
Trigger: GCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAAT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGTGTTGTCTTCCTaGTTCCTGCTGAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYPVLSS*FLLKIF
Trigger: GAAGATCTTCAGCAGGAATCAGGAAGACAACACTGG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCCAGTGTTGTCTTCCTaGTTCCTGCTGAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPPVLSS*FLLKIF
Trigger: GAAGATCTTCAGCAGGAATCAGGAAGACAACACTGG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAAAGAAATGACGGGATaGATCCCAGACTCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPKEMTG*IPDSGV
Trigger: TACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACAAAGAAATGACGGGATaGATCCCAGACTCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYKEMTG*IPDSGV
Trigger: TACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR TCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTATGAGCAACAGAACTTaGGCAGAAGGTGTTCACTGG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPMSNRT*AEGVHW
Trigger: CCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCAT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR GCA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGACATGATACTTCGCTaGATGTTGGCGTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPDMILR*MLASEF
Trigger: GAATTCTGACGCCAACATGCAGCGAAGTATCATGTC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTCTGCTGCTATTGGATaGCTCCTTCTCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSAAIG*LLLRLL
Trigger: AAGAAGCCTGAGAAGGAGGCATCCAATAGCAGCAGA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGTCCGTTTCGGGAGCTaGTTCCGAGCTGTGCGACGC +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKVRFGS*FRAVRR
Trigger: GCGTCGCACAGCTCGGAAGCAGCTCCCGAAACGGAC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCGGAGCGCAGCAAGTTaGTCAGCGTCTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLRSAAS*SASPPS
Trigger: GGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCG...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTTCCCTGGGCTCAGCTTaGAGTGCTCCGGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLSLGSA*SAPGDV
Trigger: AACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGA...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTGGATCTGTGCCCTCTaGCCGTCATATTTGTATTCG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPWICAL*PSYLYS
Trigger: CGAATACAAATATGACGGGCAGAGGGCACAGATCCA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR GCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGTGGCCTGCTCCGGCTaGTTGTCTTCACGGACTCGA +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLVACSG*LSSRTR
Trigger: TCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCAC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATACTTCCCTCCTGCTTCTaGCATCAGCCCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLILPSCF*HQPQFP
Trigger: GGGGAACTGGGGCTGATGGCAGAAGCAGGAGGGAAG...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATAGGGTCCAACCCCCTTTaGTCTTCCCTGGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIGSNPL*SSLVRG
Trigger: TCCACGCACCAGGGAAGAGCAAAGGGGGTTGGACCC...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGTCCTGTTGCCATATTaGTTAAGGGCATATACAACA +
Preference number: 4 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGVLLPY*LRAYTT
Trigger: TGTTGTATATGCCCTTAAGCAATATGGCAACAGGAC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAGATGATAGTTGTTCTTaGCAGGATTGTAACCAGATG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPDDSCS*QDCNQM
Trigger: CATCTGGTTACAATCCTGCCAAGAACAACTATCATC...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLNRASE*RQATKR
Trigger: CCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTT...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATAAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLINRASE*RQATKR
Trigger: CCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTT...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTATCCACCATGGCTGGTaGGAATTCTTGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLIHHGW*EFLARG
Trigger: CCCCCGGGCCAAGAATTCCCACCAGCCATGGTGGAT...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGGTGAGCACTTGGAATaGCTGGATCTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPGEHLE*LDLLLF
Trigger: GAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCTCTTCCCTGGTGCGTaGAGCAGGCATGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLLFPGA*SRHGHE
Trigger: CTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAG...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGGTGGAAAAATGACATaGTACTTCGCTGCATGTTGG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYGGKMT*YFAACW
Trigger: CCAACATGCAGCGAAGTATCATGTCATTTTTCCACC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCATGGTACGATTCTAGGTaGTATTTTGTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPWYDSR*YFVLFL
Trigger: CAGAAACAGAACAAAATATCACCTAGAATCGTACCA...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGGGGCTCCGTCTCTCTaGTGCTATTGGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLGAPSL*CYWMPP
Trigger: AGGAGGCATCCAATAGCAGCAGAGAGACGGAGCCCC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATAATTCCACTCCTTCAGTaGCGCCTTTGGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIIPLLQ*RLWRGL
Trigger: GAGCCCCCTCCAAAGGCGGCACTGAAGGAGTGGAAT...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTTGTGGCCTGGGCCACTaGCTTGAGAAGGACACCATC +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLCGLGH*LEKDTI
Trigger: GATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACA...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAAGACGTTCCAGGCCGTaGTCCAGCAGCACGGGGATA +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKRRSRP*SSSTGI
Trigger: TATCCCCGTGCTGCTGGAGCACGGCCTGGAACGTCT...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAAGGTCTTTAGGGGCTTaGGAGGCGTGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKRSLGA*EAWWAG
Trigger: ACCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCT...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGATGATAGTTGTTCTTaGCAGGATTGTAACCAGATG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHDDSCS*QDCNQM
Trigger: CATCTGGTTACAATCCTGCCAAGAACAACTATCATC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGAAGGATGTGACCGATaGGAGTTTAATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYEGCDR*EFNLGD
Trigger: ATCCCCAAGATTAAACTCCCATCGGTCACATCCTTC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGAAGGATGTGACCGATaGGAGTTTAATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPEGCDR*EFNLGD
Trigger: ATCCCCAAGATTAAACTCCCATCGGTCACATCCTTC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAAAGACCCAAATTTGTTaGAGAGGGGAATATAGGAAA +
Preference number: 4 (lower is better)
Translates to: LWGTALENSCAGIQVLLPKTQIC*RGEYRK
Trigger: TTTCCTATATTCCCCTCTCCAACAAATTTGGGTCTT...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATATCTTCCAGGACTTCCTaGATGGTCCGTTTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLISSRTS*MVRFGS
Trigger: GCTCCCGAAACGGACCATTCAGGAAGTCCTGGAAGA...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGCAGGAGTCTTTCACTaGCTGCTCCAGGAACTCGGC +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKAGVFH*LLQELG
Trigger: GCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTGGTACGATTCTAGGTaGTATTTTGTTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHWYDSR*YFVLFL
Trigger: CAGAAACAGAACAAAATATCACCTAGAATCGTACCA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR TCA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGGGCATATACAACACTaGAAACAAAGTACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYGHIQH*KQSTSR
Trigger: CCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATACAGGGCGTGGATCTGTaGCCTCTGCCCGTCATATTT +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIQGVDL*PLPVIF
Trigger: AAATATGACGGGCAGAGGGCACAGATCCACGCCCTG...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTAGGAACTCGGCGATCTaGTCGATGTCCTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLRNSAI*SMSLVS
Trigger: GGACACCAAGGACATCGAGCAGATCGCCGAGTTCCT...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCTCGGTCTGGGTTGTaGAATAGGAAATACCCCCGG +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLPRSGL*NRKYPR
Trigger: CCGGGGGTATTTCCTATTGCACAACCCAGACCGAGG...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAATTTGCTCTTCCCTGGTaGGTGGAGCAGGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKFALPW*VEQAWP
Trigger: TGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAA...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTGTCCTGTTGCCATATTaGTTAAGGGCATATACAACA +
Preference number: 4 (lower is better)
Translates to: TQHYVLWGTALENSCAGIVLLPY*LRAYTT
Trigger: TGTTGTATATGCCCTTAAGCAATATGGCAACAGGAC...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGACTTCCTGAATaGTCCGTTTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLPGLPE*SVSGAA
Trigger: AGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGG...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAAGCATCCACCATGGCTaGTGGGAATTCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKSIHHG*WEFLAR
Trigger: CCGGGCCAAGAATTCCCACCAGCCATGGTGGATGCT...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTTCCCAGCATCCACCATaGCTGGTGGGAATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLSQHPP*LVGILG
Trigger: GCCAAGAATTCCCACCAGCCATGGTGGATGCTGGGA...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKMPRVG*ANIGFR
Trigger: CCTGAAACCAATGTTGGCCCATCCCACCCGGGGCAT...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATACCAGGACCTTGCATATaGCCTGCAGCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIPGPCI*PAAPHC
Trigger: ACAGTGAGGAGCTGCAGGCCATATGCAAGGTCCTGG...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATAGCAGAAGGTGTTCACTaGCTGAGGCTGACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIAEGVH*LRLTQG
Trigger: ACCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGC...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAACTTCCTGATTCCTGCTaGAGATCTTCACCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKLPDSC*RSSPPR
Trigger: GCGGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAG...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGCAGTTCCTGCTTCGTaGCCACCTCAGGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKAVPAS*PPQALK
Trigger: TTTCAGAGCCTGAGGTGGCCACGAAGCAGGAACTGC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGATGATAGTTGTTCTTaGCAGGATTGTAACCAGATG +
Preference number: 4 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPDDSCS*QDCNQM
Trigger: CATCTGGTTACAATCCTGCCAAGAACAACTATCATC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAATTTCAGGGGAATCCCTaGGCTCAGCTTGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKFQGNP*AQLAVL
Trigger: GAGCACTGCAAGCTGAGCCCAGGGATTCCCCTGAAA...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR CAA 72 bp GCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTaGCCATATTGCTTAAGGGCATATACAACACTGAAA +
Preference number: 4 (lower is better)
Translates to: ALENSCAGIQVL*PYCLRAYTTLK
Trigger: TTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATAAGTCCTTCTTCAGCTTaGGCCAGTTGTGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: LTSFYPSLFFYMKQELLISPSSA*ASCAIS
Trigger: AGAGATCGCACAACTGGCTCAAGCTGAAGAAGGACT...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGGGAGAGGAGGAACCTaGATCCCTAATGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKGRGGT*IPNGIR
Trigger: TCTGATGCCATTAGGGATTCAGGTTCCTCCTCTCCC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGAGTCTTTCACTGACTaGTCCAGGAACTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKESFTD*SRNSAI
Trigger: GATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGGACACAGCACTATGTaGTATGGGGCACAGCACTTG +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKGHSTM*YGAQHL
Trigger: CAAGTGCTGTGCCCCATAGCACATAGTGCTGTGTCC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTAGTTGTGCGATCTCTTaGCGATCTCGTAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLSCAIS*RSRRWH
Trigger: ATGCCACCTACGAGATCGCCAAGAGATCGCACAACT...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR GCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAATGGAATGGCTGGATCTaGTTCTTTTCCCGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKWNGWI*FFSRSQ
Trigger: TTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCA...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
3UTR CAA 72 bp AAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCATATaGCTTAAGGGCATATACAACACTGAAAACAAAGTA +
Preference number: 4 (lower is better)
Translates to: KLLCGHSGPVAI*LKGIYNTENKV
Trigger: TACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACCTGAATGCCCGCACAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAAAAGAAATGACGGGATaGATCCCAGACTCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKKEMTG*IPDSGV
Trigger: TACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTT...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR GCA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGACATGATACTTCGCTaGATGTTGGCGTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: GPVAILLKGIYNTENKVLDMILR*MLASEF
Trigger: GAATTCTGACGCCAACATGCAGCGAAGTATCATGTC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR TCA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGGGCATATACAACACTaGAAACAAAGTACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKGHIQH*KQSTSR
Trigger: CCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 90 bp GCTGCGGCTGTTCTCGGCCACCAGCCCCACGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTCCAGCTGCCGACCTGTGGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: AAAVLGHQPHVAFLG*LSPDGLQLPTCGLG
Trigger: GCCCAGGCCACAGGTCGGCAGCTGGAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGACGTGGGGCTGGTGGCCGAGAACAGCCGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 90 bp GCGCCGCTGCCCGGGCAACACACTCAGATCCGCCAGGCGCGCCTCTaGAGTCCCAAGTTCGCGCCACGGCATTCGCGCGCAGACGTCTGC +
Preference number: 5 (lower is better)
Translates to: APLPGQHTQIRQARL*SPKFAPRHSRADVC
Trigger: GCAGACGTCTGCGCGCGAATGCCGTGGCGCGAACTTGGGACTGCAGAGGCGCGCCTGGCGGATCTGAGTGTGTTGCCCGGGCAGCGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS GCA 90 bp CCCACGTCGCCTTTCTCGGCTGCCTCAGCCCGGACGGACTCCAGCTaGCGACCTTCAGGGGAGAGCGCGGGTGGGGGTGTCGAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: PTSPFSAASARTDSS*RPSGESAGGGVEGD
Trigger: GTCACCCTCGACACCCCCACCCGCGCTCTCCCCTGAAGGTCGGCAGCTGGAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGACGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542460.5
ENST00000597901.1
CDS-3UTR CAA 90 bp GCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTTCTGTCAGCTGCTCCTaGCGTTGGTCCCGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: AWERAASTDCSASPRRSRSVSCS*RWSRAP
Trigger: CGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAGA...ACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS GCA 90 bp GCTGCGGCTGTTCTCGGCCACCAGCCCCACGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTCCAGCTGCCGACCTTCAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: AAAVLGHQPHVAFLG*LSPDGLQLPTFRGE
Trigger: CTCTCCCCTGAAGGTCGGCAGCTGGAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGACGTGGGGCTGGTGGCCGAGAACAGCCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542460.5
ENST00000597901.1
CDS-3UTR CAA 90 bp TGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGCCTTCAGTGCCGCCTTaGGAGGGGGCTCCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: CLGEGSQHRLLCQPKAQPPSVPP*EGAPSL
Trigger: GAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAGG...CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp CTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGAGGTCTTTAGGGGCTaGGGAGGCGTGGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LPGRGQPAPTALPAQGAAEVFRG*GGVVGW
Trigger: CCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCTC...GGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS TCA 90 bp CAGCTGCCGACCTTCAGGGGAGAGCGCGGGTGGGGGTGTCGAGGGTaGCAGTTGTGGCTGCGTGTCTCCCTTCTCTCGCGGCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: QLPTFRGERGWGCRG*QLWLRVSLLSRPVA
Trigger: GGCCACAGGCCGCGAGAGAAGGGAGACACGCAGCCACAACTGTCACCCTCGACACCCCCACCCGCGCTCTCCCCTGAAGGTCGGCAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp CTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGCGATGTCGCGGAACTaGCTGAAGACCCCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LPGRGQPAPTALPAQGAAAMSRN*LKTPEA
Trigger: TGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGC...GGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS GCA 90 bp CACCATGGCTGGTGGGAATTCTTGGCCCGGGGGCGTGAGGCTCACTaGCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: HHGWWEFLARGREAH*LGEGSQHRLLCQPK
Trigger: CTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTGAGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGCCATGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS CCA 90 bp AAGACCCCGGAGGCAGTGAGCGGAGGTGGTGGCAGCATGAGCCTCTaGGTGCTGCGGCTGTTCTCGGCCACCAGCCCCACGTCGCCTTTC +
Preference number: 5 (lower is better)
Translates to: KTPEAVSGGGGSMSL*VLRLFSATSPTSPF
Trigger: GAAAGGCGACGTGGGGCTGGTGGCCGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACTGCCTCCGGGGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GAGGCTCACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCTCTGCGGGGAGGCTaGGTCTGCTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EAHCLGEGSQHRLLCQPKALRGG*VCSSSS
Trigger: GGAGGAGGAAGAGCAGACCAAGCCTCCCCGCAGAGC...CTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTGAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS GCA 90 bp GGAGGAGGTCTGGAGGCGACAGGGCCACCACGGAGCGCAGCAAGTTaGTCAGCGTCTCCACCATCCGGAGCCGAGCAGACACCTCCTCGA +
Preference number: 5 (lower is better)
Translates to: GGGLEATGPPRSAAS*SASPPSGAEQTPPR
Trigger: TCGAGGAGGTGTCTGCTCGGCTCCGGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGTGGTGGCCCTGTCGCCTCCAGACCTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 90 bp GTCGCGGAACTTGCTGAAGACCCCGGAGGCAGTGAGCGGAGGTGGTaGCAGCATGAGCCTCTGGGTGCTGCGGCTGTTCTCGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: VAELAEDPGGSERRW*QHEPLGAAAVLGHQ
Trigger: CTGGTGGCCGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACTGCCTCCGGGGTCTTCAGCAAGTTCCGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCCTGGGCCACTGCCTaGAGAAGGACACCATCACCC +
Preference number: 5 (lower is better)
Translates to: CSASPRRSRPLRDLAMNRAWATA*RRTPSP
Trigger: GGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGGC...CCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGGCTGGTGGGAATTCTaGGCCCGGGGGCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: QRWGPASGRESQRHLSARGWWEF*ARGREA
Trigger: AGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGCC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS TCA 90 bp CCCGCGCTTTCCCTCGCCCTGGATGAGCGGGTGTGGCTGAGGGTCTaGGGAGTGACTGGCAGGGAAAGAGGAGGAATCGGTGGAAGCGCC +
Preference number: 5 (lower is better)
Translates to: PALSLALDERVWLRV*GVTGRERGGIGGSA
Trigger: GGCGCTTCCACCGATTCCTCCTCTTTCCCTGCCAGTCACTCCTCAGACCCTCAGCCACACCCGCTCATCCAGGGCGAGGGAAAGCGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS CCA 90 bp CTCCTCTTCCCCTTCGCTGCCCAGGACCCGGGCCGCCTTCCTCCCTaGCCTCTTCACCGGAGAGTCACTCTCGGACACCACTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: LLFPFAAQDPGRLPP*PLHRRVTLGHHSIP
Trigger: TGGAATGGAGTGGTGTCCGAGAGTGACTCTCCGGTGAAGAGGCCAGGGAGGAAGGCGGCCCGGGTCCTGGGCAGCGAAGGGGAAGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000593425.5
ENST00000594759.5
ENST00000596549.5
ENST00000600055.1
ENST00000601091.5
ENST00000613670.4
CDS CCA 90 bp GATGTCGCGGAACTTGCTGAAGACCCCGGAGGCAGTGAGCGGAGGTaGTGGCAGCATGAGCCTCTGGGTGCTGCGGCTGTTCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: DVAELAEDPGGSERR*WQHEPLGAAAVLGH
Trigger: GTGGCCGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACTGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGAGGTCTTTAGGGGCTaGGGAGGCGTGGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHEVFRG*GGVVGW
Trigger: CCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCTC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGAGGTCTTTAGGGGCTaGGGAGGCGTGGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RTSPPTQRWGPASGRESQEVFRG*GGVVGW
Trigger: CCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCTC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGGTCGGGGTCTCTGCTTaGGAGGTCTTTAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: HCLGEGSQHRLLCQPKAQVGVSA*EVFRGL
Trigger: CAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGAC...CTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGCTCTGCGGGGAGGCTaGGTCTGCTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QRWGPASGRESQRHLSARALRGG*VCSSSS
Trigger: GGAGGAGGAAGAGCAGACCAAGCCTCCCCGCAGAGC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGCTCTGCGGGGAGGCTaGGTCTGCTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHALRGG*VCSSSS
Trigger: GGAGGAGGAAGAGCAGACCAAGCCTCCCCGCAGAGC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGCCTGGGCCACTGCCTaGAGAAGGACACCATCACCC +
Preference number: 5 (lower is better)
Translates to: RERSAHFTSHTALGSSQWAWATA*RRTPSP
Trigger: GGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGGC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGGCTGGTGGGAATTCTaGGCCCGGGGGCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAGWWEF*ARGREA
Trigger: AGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGCC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGATCCCTGGGCTCAGCTaGCAGTGCTCCGGGAGACGT +
Preference number: 5 (lower is better)
Translates to: RERSAHFTSHTALGSSQWIPGLS*QCSGRR
Trigger: ACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGAT...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS TCA 90 bp TCGGGAGCTGCTTCCGAGCTGGGGAGGCAAAGGGCTTGGTGTATCTaGCCTCGCTGGCTCGTGTGCTCCCATCCCGGAGAGCTCACACCC +
Preference number: 5 (lower is better)
Translates to: SGAASELGRQRAWCI*PRWLVCSHPGELTP
Trigger: GGGTGTGAGCTCTCCGGGATGGGAGCACACGAGCCAGCGAGGTCAGATACACCAAGCCCTTTGCCTCCCCAGCTCGGAAGCAGCTCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594067.5
ENST00000595758.5
CDS GCA 90 bp ATCCCTGGGCTCAGCTTGCAGTGCTCCGGGAGACGTTCCAGGCCGTaGTCCAGCAGCACGGGGATAATTCGGTCCAGGTCGGGAACCTCG +
Preference number: 5 (lower is better)
Translates to: IPGLSLQCSGRRSRP*SSSTGIIRSRSGTS
Trigger: CGAGGTTCCCGACCTGGACCGAATTATCCCCGTGCTGCTGGAGCACGGCCTGGAACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 90 bp AAGACAAACTCGCCCTCTGTCTCCACAAAGTTCTCCCGGAGCAGCTaGCGGCGCCGGGAAAGGGGCTCACGTACCAGGGACTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: KTNSPSVSTKFSRSS*RRRERGSRTRDCRA
Trigger: GGCCCTGCAGTCCCTGGTACGTGAGCCCCTTTCCCGGCGCCGGCAGCTGCTCCGGGAGAACTTTGTGGAGACAGAGGGCGAGTTTGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596332.1
CDS CCA 90 bp AGCGAAGGGAGATGCCCTTGTCACTATCCACCTGCGGAAGCGGGATaGAGACTCCTGCGGTCCAGCCCCAGCGACCCCCTGCTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: SEGRCPCHYPPAEAG*RLLRSSPSDPLLSL
Trigger: GAGACTGAGCAGGGGGTCGCTGGGGCTGGACCGCAGGAGTCTCCATCCCGCTTCCGCAGGTGGATAGTGACAAGGGCATCTCCCTTCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597146.1
CDS-3UTR CAA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTCCTTCAGTGCCGCCTTaGGAGGGGGCTCCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAPSVPP*EGAPSL
Trigger: GAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAGG...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGAGGTCTTTAGGGGCTaGGGAGGCGTGGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAEVFRG*GGVVGW
Trigger: CCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCTC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAAACGGAGCGCAGCAAGTaGCTCAGCGTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: RLLCQPKAQPSAQGPSDETERSK*LSVSTI
Trigger: GATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGT...TTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGACGGAGCGCAGCAAGTaGCTCAGCGTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: RERSAHFTSHTALGSSQWTERSK*LSVSTI
Trigger: GATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGT...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGCCTGGGCCACTGCCTaGAGAAGGACACCATCACCC +
Preference number: 5 (lower is better)
Translates to: QRWGPASGRESQRHLSARAWATA*RRTPSP
Trigger: GGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGGC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCCACCTCCTTGCGTTaGCGGGTGGTGAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: RERSAHFTSHTALGSSQWSTSLR*RVVSTW
Trigger: CCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGA...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGACGCATCCACCTCCTaGCGTTTGCGGGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: RTSPPTQRWGPASGRESQDASTS*RLRVVS
Trigger: GCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS TCA 90 bp CGCAGAGCACACTGGGAAAATGCCCGCGCTTTCCCTCGCCCTGGATaGGCGGGTGTGGCTGAGGGTCTGAGGAGTGACTGGCAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: RRAHWENARAFPRPG*AGVAEGLRSDWQGK
Trigger: CTTTCCCTGCCAGTCACTCCTCAGACCCTCAGCCACACCCGCTCATCCAGGGCGAGGGAAAGCGCGGGCATTTTCCCAGTGTGCTCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS-3UTR CAA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTTCTGTCAGCTGCTCCTaGCGTTGGTCCCGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGSVSCS*RWSRAP
Trigger: CGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAGA...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR CAA 90 bp CTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGTCTCTCTGCTGCTATaGGATGCCTCCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LLCQPKAQPSAQGPSDEPVSLLL*DASFSG
Trigger: GCCTGAGAAGGAGGCATCCAATAGCAGCAGAGAGAC...CGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATACGGAGCGCAGCAAGTaGCTCAGCGTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHTERSK*LSVSTI
Trigger: GATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGT...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGGCTGGTGGGAATTCTaGGCCCGGGGGCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQGWWEF*ARGREA
Trigger: AGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGCC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AGCAGCTGCCGGCGCCGGGAAAGGGGCTCACGTACCAGGGACTCTCCATTGAGGGCGGGTGGTGAGCACTaGGAATGGCTGGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: SSCRRRERGSRTRDSPLRAGGEH*EWLDLL
Trigger: AAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGC...CCTCAATGGAGAGTCCCTGGTACGTGAGCCCCTTTCCCGGCGCCGGCAGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCGAAGGGAGATGCCCTaGTCACTATCCACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHRREMP*SLSTRP
Trigger: GGGCCTGGTGGATAGTGACAAGGGCATCTCCCTTCG...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTCAGTTCCCCAGGACCTaGCATATGGCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QRWGPASGRESQRHLSARQFPRT*HMACSS
Trigger: GGAGCTGCAGGCCATATGCAAGGTCCTGGGGAACTG...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCAGTTCCCCAGGACCTaGCATATGGCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHQFPRT*HMACSS
Trigger: GGAGCTGCAGGCCATATGCAAGGTCCTGGGGAACTG...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 90 bp ATAAACCGAGGGAAGCGAAGGGAGATGCCCTTGTCACTATCCACCTaGGGAAGCGGGATGGAGACTCCTGCGGTCCAGCCCCAGCGACCC +
Preference number: 5 (lower is better)
Translates to: INRGKRREMPLSLST*GSGMETPAVQPQRP
Trigger: GGGTCGCTGGGGCTGGACCGCAGGAGTCTCCATCCCGCTTCCGCAGGTGGATAGTGACAAGGGCATCTCCCTTCGCTTCCCTCGGTTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597146.1
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTCTGTCAGCTGCTCCTaGCGTTGGTCCCGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTSVSCS*RWSRAP
Trigger: CGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAGA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGTCGGGGTCTCTGCTTaGGAGGTCTTTAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: QRWGPASGRESQRHLSARVGVSA*EVFRGL
Trigger: CAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGAC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGTCGGGGTCTCTGCTTaGGAGGTCTTTAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: RTSPPTQRWGPASGRESQVGVSA*EVFRGL
Trigger: CAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGAC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGATGATGTCTATCTTCTaGGCTGTGGAAGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: CLGEGSQHRLLCQPKAQPMMSIF*AVEALP
Trigger: TGGCAGTGCTTCCACAGCCAAGAAGATAGACATCAT...CGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGGCTGGTGGGAATTCTaGGCCCGGGGGCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTGWWEF*ARGREA
Trigger: AGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGCC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGGCGGGTGGTGAGCACTaGGAATGGCTGGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: RTSPPTQRWGPASGRESQAGGEH*EWLDLL
Trigger: AAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGC...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGCCTGCTCCGGCTGCTaGTCTTCACGGACTCGAATA +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHACSGC*SSRTRI
Trigger: TATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 90 bp GCCTCCTCAAAGCGTTTCAGGACCTCGCTGATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGGGGAATCCCTGGGCTCAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: ASSKRFRTSLMPRVG*ANIGFRGIPGLSLQ
Trigger: CTGCAAGCTGAGCCCAGGGATTCCCCTGAAACCAATGTTGGCCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAACGCTTTGAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTCAGAGAGGGAAGCATaGTTCTCAGGAGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: SASPRRSRPLRDLAMNRASEREA*FSGDVA
Trigger: TGCCACATCTCCTGAGAACAATGCTTCCCTCTCTGA...AGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCTCTGCGGGGAGGCTaGGTCTGCTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTALRGG*VCSSSS
Trigger: GGAGGAGGAAGAGCAGACCAAGCCTCCCCGCAGAGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGCGATGTCGCGGAACTaGCTGAAGACCCCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: ALVVACSGCLSSRTRINRAMSRN*LKTPEA
Trigger: TGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCTTCAGGATCATGCCTaGCTCCTCCAGCCACGTCTT +
Preference number: 5 (lower is better)
Translates to: RTSPPTQRWGPASGRESQLQDHA*LLQPRL
Trigger: AAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAAG...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTTCAGGATCATGCCTaGCTCCTCCAGCCACGTCTT +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHLQDHA*LLQPRL
Trigger: AAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAAG...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTTGGGATGGGCCAACATaGGTTTCAGGGGAATCCCTG +
Preference number: 5 (lower is better)
Translates to: QRWGPASGRESQRHLSARWDGPT*VSGESL
Trigger: CAGGGATTCCCCTGAAACCAATGTTGGCCCATCCCA...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 90 bp CCACCCGAGGTCCTAGGGCAGGGGCAATTAGGACCAGGTTGTGTCTaGCCCCGACACAACCAGGAAACACATCTACCTCTCCCGGGCAAT +
Preference number: 5 (lower is better)
Translates to: PPEVLGQGQLGPGCV*PRHNQETHLPLPGN
Trigger: ATTGCCCGGGAGAGGTAGATGTGTTTCCTGGTTGTGTCGGGGGCAGACACAACCTGGTCCTAATTGCCCCTGCCCTAGGACCTCGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600055.1
CDS CCA 90 bp GTCTCTGCTTTGGAGGTCTTTAGGGGCTTGGGAGGCGTGGTGGGCTaGTCCCCGTCTTCTCCTTCCTTCTCTGTGGCCACTTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: VSALEVFRGLGGVVG*SPSSPSFSVATSAS
Trigger: AGAGGCTGAAGTGGCCACAGAGAAGGAAGGAGAAGACGGGGACCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCTCCAAAGCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000595758.5
ENST00000596104.5
ENST00000599165.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 90 bp TGGTCCGTTTCGGGAGCTGCTTCCGAGCCCACGATCGGCAGGAGTTaGTGTATAAATACCCCAGCTGCCTCGCATCTCGGGGGTCACTCT +
Preference number: 5 (lower is better)
Translates to: WSVSGAASEPTIGRS*CINTPAASHLGGHS
Trigger: AGAGTGACCCCCGAGATGCGAGGCAGCTGGGGTATTTATACACCAACTCCTGCCGATCGTGGGCTCGGAAGCAGCTCCCGAAACGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596104.5
CDS-3UTR CAA 90 bp GAGGCTCACTGCCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGCCAGCCCAAGATACTTCGCTGCATGTaGGCGTCAGAATTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: EAHCLGEGSQHRLLCQPKILRCM*ASEFSL
Trigger: AAGGGAGAATTCTGACGCCAACATGCAGCGAAGTAT...CTTGGGCTGGCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTGAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCGCTCTGCGGGGAGGCTaGGTCTGCTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: STPRSGLCNRKYPRESNLALRGG*VCSSSS
Trigger: GGAGGAGGAAGAGCAGACCAAGCCTCCCCGCAGAGC...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCCTGGGCCACTGCCTaGAGAAGGACACCATCACCC +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTAWATA*RRTPSP
Trigger: GGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCATCCCTGGGCTCAGCTaGCAGTGCTCCGGGAGACGT +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTIPGLS*QCSGRR
Trigger: ACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGAT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTTCCACCTCCTTGCGTTaGCGGGTGGTGAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGSTSLR*RVVSTW
Trigger: CCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGA...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGACGCATCCACCTCCTaGCGTTTGCGGGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTDASTS*RLRVVS
Trigger: GCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp GGTGGCATCAACATCCAGGGTCTTCACCATCAGCCCCTCGCAGGAGTCTTTCACGACGCATCCACCTCCTaGCGTTTGCGGGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GGINIQGLHHQPLAGVFHDASTS*RLRVVS
Trigger: GCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTC...GTGAAAGACTCCTGCGAGGGGCTGATGGTGAAGACCCTGGATGTTGATGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATTATGGGGCACAGCACTaGAAAACTCTTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHYGAQH*KTLVRA
Trigger: TGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATA...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS TCA 90 bp GGGGACTACAGCCCCCGGCCTTCCTTCCAGGTGGGAAAGGCCATGTaGTTGGAACCCACGCAGCATGTGCAATGTCTGGCTCACATCCTT +
Preference number: 5 (lower is better)
Translates to: GDYSPRPSFQVGKAM*LEPTQHVQCLAHIL
Trigger: AAGGATGTGAGCCAGACATTGCACATGCTGCGTGGGTTCCAATCACATGGCCTTTCCCACCTGGAAGGAAGGCCGGGGGCTGTAGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS CCA 90 bp CGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGGCCTTTGATGATGTCTATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RSRPLRDLAMNRASE*RQATKRPLMMSIFL
Trigger: CAAGAAGATAGACATCATCAAAGGCCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS CCA 90 bp GCCTCCTCAAAGCGTTTCAGGACCTCGCTGATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGGGGAATCCCAGAACGTCTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: ASSKRFRTSLMPRVG*ANIGFRGIPERLLQ
Trigger: CTGAAGCAGACGTTCTGGGATTCCCCTGAAACCAATGTTGGCCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAACGCTTTGAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS CCA 90 bp TCGAGGGTGACAGTTGTGGCTGCGTGTCTCCCTTCTCTCGCGGCCTaGATGAATTTTCTCCAGCTGTGTGTGCTTGTGGCGAGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: SRVTVVAACLPSLAA*MNFLQLCVLVASPC
Trigger: GCAGGGACTCGCCACAAGCACACACAGCTGGAGAAAATTCATCCAGGCCGCGAGAGAAGGGAGACACGCAGCCACAACTGTCACCCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597901.1
CDS CCA 90 bp TTCCAGGACTTCCTGAATGGTCCGTTTCGGGAGCTGCTTCCGAGCTaGGGAGGCAAAGGGCTTGGTGTATCTGACCTCGCTGGCTCGTGT +
Preference number: 5 (lower is better)
Translates to: FQDFLNGPFRELLPS*GGKGLGVSDLAGSC
Trigger: ACACGAGCCAGCGAGGTCAGATACACCAAGCCCTTTGCCTCCCCAGCTCGGAAGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594067.5
ENST00000595758.5
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTCTGTCAGCTGCTCCTaGCGTTGGTCCCGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSVSCS*RWSRAP
Trigger: CGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAGA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp GCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGAACCGGGCTTCTGCTTTACCCTCTTTCTaGGGGTGGAAAAATGACATG +
Preference number: 5 (lower is better)
Translates to: ASPRRSRPLRDLAMNRASALPSF*GWKNDM
Trigger: CATGTCATTTTTCCACCCCAAGAAAGAGGGTAAAGC...AGAAGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp CGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGTCAGAGAGGGAAGCATaGTTCTCAGGAGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: RTSPPTQRWGPASGRESQSEREA*FSGDVA
Trigger: TGCCACATCTCCTGAGAACAATGCTTCCCTCTCTGA...CTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCGCGATGTCGCGGAACTaGCTGAAGACCCCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: STPRSGLCNRKYPRESNLAMSRN*LKTPEA
Trigger: TGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGC...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ACCGACTGCTCTGCCAGCCCAAGGCGCAGCCGTCCGCTCAGGGACCTAGCGATGGCCACAAAGAGGCCTTaGATGATGTCTATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TDCSASPRRSRPLRDLAMATKRP*MMSIFL
Trigger: CAAGAAGATAGACATCATCAAAGGCCTCTTTGTGGC...CATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTGCGGGTGGTGAGCACTaGGAATGGCTGGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGAGGEH*EWLDLL
Trigger: AAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGC...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CGAAGGCGTACAAACACACCTGCACCTGGATCTCAGACGCATCCACCTCCTTGCTCCACCTCCTTGCGTTaGCGGGTGGTGAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: RRRTNTPAPGSQTHPPPCSTSLR*RVVSTW
Trigger: CCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGA...GCAAGGAGGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTACGCCTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CAA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCGACGCATCCACCTCCTaGCGTTTGCGGGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: STPRSGLCNRKYPRESNLDASTS*RLRVVS
Trigger: GCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTC...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GGTAGGCGCCGATCACCACCAGGTCCAGGGTGTCACCCACGCCATCAAGGTAGTTTCAGCTTGAGCCAGTaGTGCGATCTCTTGGCGATC +
Preference number: 5 (lower is better)
Translates to: GRRRSPPGPGCHPRHQGSFSLSQ*CDLLAI
Trigger: GATCGCCAAGAGATCGCACAACTGGCTCAAGCTGAA...ACTACCTTGATGGCGTGGGTGACACCCTGGACCTGGTGGTGATCGGCGCCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CAA 90 bp CAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATCTATCCGCACGTGGCATTCAGGTCCTGTaGCCATATTGCTTAAGGGCA +
Preference number: 5 (lower is better)
Translates to: QRWGPASGRESQRHLSARGIQVL*PYCLRA
Trigger: TGCCCTTAAGCAATATGGCAACAGGACCTGAATGCC...ACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 90 bp GATCTGTGCCCTCTGCCCGTCATATTTGTATTCGCAGGTGAAAGCTaGCTCCTCAAAGCGTTTCAGGACCTCGCTGATGCCCCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DLCPLPVIFVFAGES*LLKAFQDLADAPGG
Trigger: CCCACCCGGGGCATCAGCGAGGTCCTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAATATGACGGGCAGAGGGCACAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000596457.1
ENST00000596672.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 90 bp TTCCGAGCCCACGATCGGCAGGAGTTGGTGTATAAATACCCCAGCTaGCTCGCATCTCGGGGGTCACTCTGGAGCATTTACACCGTTCCC +
Preference number: 5 (lower is better)
Translates to: FRAHDRQELVYKYPS*LASRGSLWSIYTVP
Trigger: GGGAACGGTGTAAATGCTCCAGAGTGACCCCCGAGATGCGAGGCAGCTGGGGTATTTATACACCAACTCCTGCCGATCGTGGGCTCGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596104.5
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCCTTCAGTGCCGCCTTaGGAGGGGGCTCCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHPSVPP*EGAPSL
Trigger: GAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAGG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGAGGTCTTTAGGGGCTaGGGAGGCGTGGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHEVFRG*GGVVGW
Trigger: CCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCTC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
CDS-3UTR CAA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTGCGATGTCGCGGAACTaGCTGAAGACCCCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPAMSRN*LKTPEA
Trigger: TGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGC...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGCTGGTGGGAATTCTaGGCCCGGGGGCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPGWWEF*ARGREA
Trigger: AGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGCC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAATCCCTGGGCTCAGCTaGCAGTGCTCCGGGAGACGT +
Preference number: 5 (lower is better)
Translates to: LWGTALENSCAGIQVLLPIPGLS*QCSGRR
Trigger: ACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGAT...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCGCCTGCTCCGGCTGCTaGTCTTCACGGACTCGAATA +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTACSGC*SSRTRI
Trigger: TATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGC...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGTTCTGAATCTGACTTaGCTTCCGGTACAAACAGGC +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHVLNLT*LPVQTG
Trigger: GCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAAC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCAGTTCCCCAGGACCTaGCATATGGCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: STPRSGLCNRKYPRESNLQFPRT*HMACSS
Trigger: GGAGCTGCAGGCCATATGCAAGGTCCTGGGGAACTG...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGACCCCTCGGTCTGGGTaGTGCAATAGGAAATACCCC +
Preference number: 5 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQTPRSG*CNRKYP
Trigger: GGGGTATTTCCTATTGCACAACCCAGACCGAGGGGT...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AGGGAGAGGTCAGCGCACTTCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGGGTCCTGTTGCCATATaGCTTAAGGGCATATACAAC +
Preference number: 5 (lower is better)
Translates to: RERSAHFTSHTALGSSQWGPVAI*LKGIYN
Trigger: GTTGTATATGCCCTTAAGCAATATGGCAACAGGACC...CCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGCTGACCTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 90 bp TCCGAGCTGTGCGACGCTTCGGAATCCCTGATGGGGAACTGTCCATaGGAGAGGTGTCAGAGAGGGAAGCATTGTTCTCAGGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: SELCDASESLMGNCP*ERCQRGKHCSQEMW
Trigger: CCACATCTCCTGAGAACAATGCTTCCCTCTCTGACACCTCTCCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGTCGCACAGCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000593425.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 90 bp GGCCCGGTTTCCAGCAGGCATCTTCCACGGGATGATAGTTGTTCTTaGCAGGATTGTAACCAGATGGATCCAGGGGTCCCTCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GPVSSRHLPRDDSCS*QDCNQMDPGVPQQL
Trigger: GAGCTGCTGAGGGACCCCTGGATCCATCTGGTTACAATCCTGCCAAGAACAACTATCATCCCGTGGAAGATGCCTGCTGGAAACCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTCTGTCAGCTGCTCCTaGCGTTGGTCCCGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSVSCS*RWSRAP
Trigger: CGGCGCGCGGGACCAACGCAAGGAGCAGCTGACAGA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACCTTCAGTGCCGCCTTaGGAGGGGGCTCCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPPSVPP*EGAPSL
Trigger: GAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAGG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGAGGTCTTTAGGGGCTaGGGAGGCGTGGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPEVFRG*GGVVGW
Trigger: CCAGCCCACCACGCCTCCCAAGCCCCTAAAGACCTC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCACCTCCCACACAGCGCTGGGGTCCAGCCAGTGGTCGGGAATCACAGCGCCATGCCACAAAGAGGCCTTaGATGATGTCTATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SPPTQRWGPASGRESQRHATKRP*MMSIFL
Trigger: CAAGAAGATAGACATCATCAAAGGCCTCTTTGTGGC...ATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGGCTGGTGGGAATTCTaGGCCCGGGGGCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYGWWEF*ARGREA
Trigger: AGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGCC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACATCCCTGGGCTCAGCTaGCAGTGCTCCGGGAGACGT +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHIPGLS*QCSGRR
Trigger: ACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGAT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGTCCACCTCCTTGCGTTaGCGGGTGGTGAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGSTSLR*RVVSTW
Trigger: CCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGA...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTTTCAGCTTGAGCCAGTaGTGCGATCTCTTGGCGATC +
Preference number: 5 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGFSLSQ*CDLLAI
Trigger: GATCGCCAAGAGATCGCACAACTGGCTCAAGCTGAA...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGTTCTGAATCTGACTTaGCTTCCGGTACAAACAGGC +
Preference number: 5 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRAVLNLT*LPVQTG
Trigger: GCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAAC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CGAAGGCGTACAAACACACCTGCACCTGGATCTCAGACGCATCCACCTCCTTGCTGGGATGGGCCAACATaGGTTTCAGGGGAATCCCAG +
Preference number: 5 (lower is better)
Translates to: RRRTNTPAPGSQTHPPPCWDGPT*VSGESQ
Trigger: CTGGGATTCCCCTGAAACCAATGTTGGCCCATCCCA...GCAAGGAGGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTACGCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCACCCCTCGGTCTGGGTaGTGCAATAGGAAATACCCC +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTTPRSG*CNRKYP
Trigger: GGGGTATTTCCTATTGCACAACCCAGACCGAGGGGT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR CAA 90 bp TCCAACCCCCTTTGCTCTTCCCTGGTGCGTGGAGCAGGCATGGCCATGAGGGCTGATGAGCAACAGAACTaGAGCAGAAGGTGTTCACTG +
Preference number: 5 (lower is better)
Translates to: SNPLCSSLVRGAGMAMRADEQQN*SRRCSL
Trigger: CAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC...AGCCCTCATGGCCATGCCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 90 bp CTGCTTCTGTGCGACGCTTCGGAATCCCTGATGGGGAACTGTCCATaGGAGAGGTGTCAGAGAGGGAAGCATTGTTCTCAGGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: LLLCDASESLMGNCP*ERCQRGKHCSQEMW
Trigger: CCACATCTCCTGAGAACAATGCTTCCCTCTCTGACACCTCTCCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGTCGCACAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536218.5
ENST00000596549.5
CDS CCA 90 bp CCTCTTCTGTGCGACGCTTCGGAATCCCTGATGGGGAACTGTCCATaGGAGAGGTGTCAGAGAGGGAAGCATTGTTCTCAGGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: PLLCDASESLMGNCP*ERCQRGKHCSQEMW
Trigger: CCACATCTCCTGAGAACAATGCTTCCCTCTCTGACACCTCTCCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGTCGCACAGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCCTTCAGTGCCGCCTTaGGAGGGGGCTCCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPPSVPP*EGAPSL
Trigger: GAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAGG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCTTCAGTGCCGCCTTaGGAGGGGGCTCCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYPSVPP*EGAPSL
Trigger: GAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAGG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTGTCGGGGTCTCTGCTTaGGAGGTCTTTAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPVGVSA*EVFRGL
Trigger: CAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGAC...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCTCTGCGGGGAGGCTaGGTCTGCTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPALRGG*VCSSSS
Trigger: GGAGGAGGAAGAGCAGACCAAGCCTCCCCGCAGAGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACGGAGCGCAGCAAGTaGCTCAGCGTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHTERSK*LSVSTI
Trigger: GATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCGATGTCGCGGAACTaGCTGAAGACCCCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPAMSRN*LKTPEA
Trigger: TGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAATCCCTGGGCTCAGCTaGCAGTGCTCCGGGAGACGT +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPIPGLS*QCSGRR
Trigger: ACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGAT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGGATGGGAGTTTAATCTaGGGGATGCGGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQDGSLI*GMRLMM
Trigger: CATCATCAGCCGCATCCCCAAGATTAAACTCCCATC...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGCGGGTGGTGAGCACTaGGAATGGCTGGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGAGGEH*EWLDLL
Trigger: AAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTCCACCTCCTTGCGTTaGCGGGTGGTGAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSTSLR*RVVSTW
Trigger: CCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCTTCAGCTTGAGCCAGTaGTGCGATCTCTTGGCGATC +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTFSLSQ*CDLLAI
Trigger: GATCGCCAAGAGATCGCACAACTGGCTCAAGCTGAA...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTGCCTGCTCCGGCTGCTaGTCTTCACGGACTCGAATA +
Preference number: 5 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPACSGC*SSRTRI
Trigger: TATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGC...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGATTTCCCAGAATTCCTaGCAGCTAGGGGTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQISQNS*QLGVSH
Trigger: ATGGCTCACCCCTAGCTGCAAGGAATTCTGGGAAAT...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS TCA 90 bp CCCTCCCTCCTCTGCGTCCCTCCTCCCACAATTAGAACAGGGAAGTaGGCCACATTTGATCACAGACATTGGGGTGACAACCTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: PSLLCVPPPTIRTGK*ATFDHRHWGDNLWR
Trigger: CCTCCAAAGGTTGTCACCCCAATGTCTGTGATCAAATGTGGCTCACTTCCCTGTTCTAATTGTGGGAGGAGGGACGCAGAGGAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS-3UTR CAA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAATACTTCGCTGCATGTaGGCGTCAGAATTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: ALVVACSGCLSSRTRINRILRCM*ASEFSL
Trigger: AAGGGAGAATTCTGACGCCAACATGCAGCGAAGTAT...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ACACAGCCACGGGGAGCTGGTTCAGGACACAGCACTATGTGCTATGGGGCACAGATACTTCGCTGCATGTaGGCGTCAGAATTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: TQPRGAGSGHSTMCYGAQILRCM*ASEFSL
Trigger: AAGGGAGAATTCTGACGCCAACATGCAGCGAAGTAT...CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGGTCTCTCTGCTGCTATaGGATGCCTCCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGVSLLL*DASFSG
Trigger: GCCTGAGAAGGAGGCATCCAATAGCAGCAGAGAGAC...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCCTGGGCCACTGCCTaGAGAAGGACACCATCACCC +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPAWATA*RRTPSP
Trigger: GGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCGATGTCGCGGAACTaGCTGAAGACCCCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYAMSRN*LKTPEA
Trigger: TGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCGATGTCGCGGAACTaGCTGAAGACCCCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPAMSRN*LKTPEA
Trigger: TGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGTGGGATGGGCCAACATaGGTTTCAGGGGAATCCCTG +
Preference number: 5 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGWDGPT*VSGESL
Trigger: CAGGGATTCCCCTGAAACCAATGTTGGCCCATCCCA...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CAAACACACCTGCACCTGGATCTCAGACGCATCCACCTCCTTGCGTTTGCGGGTGATGGGAGTTTAATCTaGGGGATGCGGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: QTHLHLDLRRIHLLAFAGDGSLI*GMRLMM
Trigger: CATCATCAGCCGCATCCCCAAGATTAAACTCCCATC...ACCCGCAAACGCAAGGAGGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGCGGGTGGTGAGCACTaGGAATGGCTGGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHAGGEH*EWLDLL
Trigger: AAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATCCACCTCCTTGCGTTaGCGGGTGGTGAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPSTSLR*RVVSTW
Trigger: CCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGACGCATCCACCTCCTaGCGTTTGCGGGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYDASTS*RLRVVS
Trigger: GCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACGAAGGGAGATGCCCTaGTCACTATCCACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPRREMP*SLSTRP
Trigger: GGGCCTGGTGGATAGTGACAAGGGCATCTCCCTTCG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGACCCCTCGGTCTGGGTaGTGCAATAGGAAATACCCC +
Preference number: 5 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGTPRSG*CNRKYP
Trigger: GGGGTATTTCCTATTGCACAACCCAGACCGAGGGGT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GCACTGGTGGTGGCCTGCTCCGGCTGCTTGTCTTCACGGACTCGAATAAACCGAGATGAGCAACAGAACTaGAGCAGAAGGTGTTCACTG +
Preference number: 5 (lower is better)
Translates to: ALVVACSGCLSSRTRINRDEQQN*SRRCSL
Trigger: CAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC...TCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCACCACCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCATTTCCCAGAATTCCTaGCAGCTAGGGGTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTISQNS*QLGVSH
Trigger: ATGGCTCACCCCTAGCTGCAAGGAATTCTGGGAAAT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594759.5
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCATACTTCGCTGCATGTaGGCGTCAGAATTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTILRCM*ASEFSL
Trigger: AAGGGAGAATTCTGACGCCAACATGCAGCGAAGTAT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp ATGCCCTGTACCCAGGCCCTAGGAGGGCGAGGGCTTAGTAGGTATCTTCAGGGTGCTTTACCCTCTTTCTaGGGGTGGAAAAATGACATG +
Preference number: 5 (lower is better)
Translates to: MPCTQALGGRGLSRYLQGALPSF*GWKNDM
Trigger: CATGTCATTTTTCCACCCCAAGAAAGAGGGTAAAGC...ACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCCTGGGTACAGGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GCCTTGTTGGTTCTGAATCTGACTTTGCTTCCGGTACAAACAGGCCACCTGAGCGTCTCTCTGCTGCTATaGGATGCCTCCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ALLVLNLTLLPVQTGHLSVSLLL*DASFSG
Trigger: GCCTGAGAAGGAGGCATCCAATAGCAGCAGAGAGAC...GCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGTCGGGGTCTCTGCTTaGGAGGTCTTTAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPVGVSA*EVFRGL
Trigger: CAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGAC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTACGGAGCGCAGCAAGTaGCTCAGCGTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPTERSK*LSVSTI
Trigger: GATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACACGGAGCGCAGCAAGTaGCTCAGCGTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYTERSK*LSVSTI
Trigger: GATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGT...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCATGATGTCTATCTTCTaGGCTGTGGAAGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTMMSIF*AVEALP
Trigger: TGGCAGTGCTTCCACAGCCAAGAAGATAGACATCAT...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCTTCAGGATCATGCCTaGCTCCTCCAGCCACGTCTT +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHLQDHA*LLQPRL
Trigger: AAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAAG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTCCACCTCCTTGCGTTaGCGGGTGGTGAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSTSLR*RVVSTW
Trigger: CCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACAAGCCAGTTCCAAGCTaGCATATGGCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHKPVPS*HMACSS
Trigger: GGAGCTGCAGGCCATATGCAAGCTTGGAACTGGCTT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCGAAGGGAGATGCCCTaGTCACTATCCACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPRREMP*SLSTRP
Trigger: GGGCCTGGTGGATAGTGACAAGGGCATCTCCCTTCG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTGCCTGCTCCGGCTGCTaGTCTTCACGGACTCGAATA +
Preference number: 5 (lower is better)
Translates to: TQHYVLWGTALENSCAGIACSGC*SSRTRI
Trigger: TATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGC...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCATACTTCGCTGCATGTaGGCGTCAGAATTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: STPRSGLCNRKYPRESNLILRCM*ASEFSL
Trigger: AAGGGAGAATTCTGACGCCAACATGCAGCGAAGTAT...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGTCTCTCTGCTGCTATaGGATGCCTCCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPVSLLL*DASFSG
Trigger: GCCTGAGAAGGAGGCATCCAATAGCAGCAGAGAGAC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGTCGGGGTCTCTGCTTaGGAGGTCTTTAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYVGVSA*EVFRGL
Trigger: CAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGAC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACTTCAGGATCATGCCTaGCTCCTCCAGCCACGTCTT +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPLQDHA*LLQPRL
Trigger: AAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAAG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCATGGGATGGGCCAACATaGGTTTCAGGGGAATCCCTG +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPWDGPT*VSGESL
Trigger: CAGGGATTCCCCTGAAACCAATGTTGGCCCATCCCA...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAGGGGCTCACGTACCAGGGACTCTCCATTGAGGTAGATGAGGTCGAAGGCGTACTCTGCCCGTCATATTaGTATTCGCAGGTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: KGLTYQGLSIEVDEVEGVLCPSY*YSQVKA
Trigger: AGCTTTCACCTGCGAATACAAATATGACGGGCAGAG...TACGCCTTCGACCTCATCTACCTCAATGGAGAGTCCCTGGTACGTGAGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCGGGTGGTGAGCACTaGGAATGGCTGGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPAGGEH*EWLDLL
Trigger: AAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAAAGCCAGTTCCAAGCTaGCATATGGCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPKPVPS*HMACSS
Trigger: GGAGCTGCAGGCCATATGCAAGCTTGGAACTGGCTT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCCTGCTCCGGCTGCTaGTCTTCACGGACTCGAATA +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYACSGC*SSRTRI
Trigger: TATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCCTGCTCCGGCTGCTaGTCTTCACGGACTCGAATA +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPACSGC*SSRTRI
Trigger: TATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACACACACACCCCTGCCACAGCAGATTaGCTAAAAAGCAAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: NDGMNPRLRSKPPPHTHTPATAD*LKSKGN
Trigger: ATTGCCTTTGCTTTTTAGCAAATCTGCTGTGGCAGG...GGTGTGTGTGTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGTCTCTCTGCTGCTATaGGATGCCTCCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPVSLLL*DASFSG
Trigger: GCCTGAGAAGGAGGCATCCAATAGCAGCAGAGAGAC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACTCAGAGAGGGAAGCATaGTTCTCAGGAGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHSEREA*FSGDVA
Trigger: TGCCACATCTCCTGAGAACAATGCTTCCCTCTCTGA...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTATGATGTCTATCTTCTaGGCTGTGGAAGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPMMSIF*AVEALP
Trigger: TGGCAGTGCTTCCACAGCCAAGAAGATAGACATCAT...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGATGATGTCTATCTTCTaGGCTGTGGAAGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGMMSIF*AVEALP
Trigger: TGGCAGTGCTTCCACAGCCAAGAAGATAGACATCAT...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCGCCACAAAGAGGCCTTaGATGATGTCTATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: STPRSGLCNRKYPRESNLATKRP*MMSIFL
Trigger: CAAGAAGATAGACATCATCAAAGGCCTCTTTGTGGC...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACTGGGATGGGCCAACATaGGTTTCAGGGGAATCCCTG +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYWDGPT*VSGESL
Trigger: CAGGGATTCCCCTGAAACCAATGTTGGCCCATCCCA...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GATGAGCAACAGAACTTGAGCAGAAGGTGTTCACTGGCTGAGGCTGACTCAGGGCTCTGCCCGTCATATTaGTATTCGCAGGTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: DEQQNLSRRCSLAEADSGLCPSY*YSQVKA
Trigger: AGCTTTCACCTGCGAATACAAATATGACGGGCAGAG...CCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTAAGCCAGTTCCAAGCTaGCATATGGCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPKPVPS*HMACSS
Trigger: GGAGCTGCAGGCCATATGCAAGCTTGGAACTGGCTT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
CDS-3UTR CAA 90 bp AGCACCCCTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCCTGCCACAGCAGATTaGCTAAAAAGCAAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: STPRSGLCNRKYPRESNLPATAD*LKSKGN
Trigger: ATTGCCTTTGCTTTTTAGCAAATCTGCTGTGGCAGG...GAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAGGGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACATACTTCGCTGCATGTaGGCGTCAGAATTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHILRCM*ASEFSL
Trigger: AAGGGAGAATTCTGACGCCAACATGCAGCGAAGTAT...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTCAGGTCCTGTTGCCAGCTTTACCCTCTTTCTaGGGGTGGAAAAATGACATG +
Preference number: 5 (lower is better)
Translates to: LWGTALENSCAGIQVLLPALPSF*GWKNDM
Trigger: CATGTCATTTTTCCACCCCAAGAAAGAGGGTAAAGC...TGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTGCTTTACCCTCTTTCTaGGGGTGGAAAAATGACATG +
Preference number: 5 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPALPSF*GWKNDM
Trigger: CATGTCATTTTTCCACCCCAAGAAAGAGGGTAAAGC...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACCTCTGCCCGTCATATTaGTATTCGCAGGTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHLCPSY*YSQVKA
Trigger: AGCTTTCACCTGCGAATACAAATATGACGGGCAGAG...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGATGGGAGTTTAATCTaGGGGATGCGGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPDGSLI*GMRLMM
Trigger: CATCATCAGCCGCATCCCCAAGATTAAACTCCCATC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTTCAGCTTGAGCCAGTaGTGCGATCTCTTGGCGATC +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPFSLSQ*CDLLAI
Trigger: GATCGCCAAGAGATCGCACAACTGGCTCAAGCTGAA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp ATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCACGTTCTGAATCTGACTTaGCTTCCGGTACAAACAGGC +
Preference number: 5 (lower is better)
Translates to: IERNDGMNPRLRSKPPPHVLNLT*LPVQTG
Trigger: GCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAAC...GTGAGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTCCTGCCACAGCAGATTaGCTAAAAAGCAAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPPATAD*LKSKGN
Trigger: ATTGCCTTTGCTTTTTAGCAAATCTGCTGTGGCAGG...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAATTTCCCAGAATTCCTaGCAGCTAGGGGTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPISQNS*QLGVSH
Trigger: ATGGCTCACCCCTAGCTGCAAGGAATTCTGGGAAAT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTCGGTCTGGGTTGTGCAATAGGAAATACCCCCGGGAGTCTAATCTCCTTCCCTGGTCCTGTTGCCATATaGCTTAAGGGCATATACAAC +
Preference number: 5 (lower is better)
Translates to: LGLGCAIGNTPGSLISFPGPVAI*LKGIYN
Trigger: GTTGTATATGCCCTTAAGCAATATGGCAACAGGACC...AGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAACCCAGACCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGGCATTCAGGTCCTGTaGCCATATTGCTTAAGGGCA +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPGIQVL*PYCLRA
Trigger: TGCCCTTAAGCAATATGGCAACAGGACCTGAATGCC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAATACTTCGCTGCATGTaGGCGTCAGAATTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPILRCM*ASEFSL
Trigger: AAGGGAGAATTCTGACGCCAACATGCAGCGAAGTAT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTTCAGAGAGGGAAGCATaGTTCTCAGGAGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPSEREA*FSGDVA
Trigger: TGCCACATCTCCTGAGAACAATGCTTCCCTCTCTGA...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGCCTGGGCCACTGCCTaGAGAAGGACACCATCACCC +
Preference number: 5 (lower is better)
Translates to: GPVAILLKGIYNTENKVLAWATA*RRTPSP
Trigger: GGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGGC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAATGATGTCTATCTTCTaGGCTGTGGAAGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPMMSIF*AVEALP
Trigger: TGGCAGTGCTTCCACAGCCAAGAAGATAGACATCAT...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACTCTGCCCGTCATATTaGTATTCGCAGGTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPLCPSY*YSQVKA
Trigger: AGCTTTCACCTGCGAATACAAATATGACGGGCAGAG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGATGGGAGTTTAATCTaGGGGATGCGGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPDGSLI*GMRLMM
Trigger: CATCATCAGCCGCATCCCCAAGATTAAACTCCCATC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGATGGGAGTTTAATCTaGGGGATGCGGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYDGSLI*GMRLMM
Trigger: CATCATCAGCCGCATCCCCAAGATTAAACTCCCATC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATAGACGCATCCACCTCCTaGCGTTTGCGGGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LTSFYPSLFFYMKQELLIDASTS*RLRVVS
Trigger: GCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTC...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGTTCTGAATCTGACTTaGCTTCCGGTACAAACAGGC +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPVLNLT*LPVQTG
Trigger: GCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAAC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTGATGAGCAACAGAACTaGAGCAGAAGGTGTTCACTG +
Preference number: 5 (lower is better)
Translates to: TQHYVLWGTALENSCAGIDEQQN*SRRCSL
Trigger: CAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATC...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTATGATGTCTATCTTCTaGGCTGTGGAAGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPMMSIF*AVEALP
Trigger: TGGCAGTGCTTCCACAGCCAAGAAGATAGACATCAT...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCAGCCACAAAGAGGCCTTaGATGATGTCTATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPATKRP*MMSIFL
Trigger: CAAGAAGATAGACATCATCAAAGGCCTCTTTGTGGC...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp ACACAGCACTATGTGCTATGGGGCACAGCACTTGAAAACTCTTGTGCGGGCATTGCCACAAAGAGGCCTTaGATGATGTCTATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TQHYVLWGTALENSCAGIATKRP*MMSIFL
Trigger: CAAGAAGATAGACATCATCAAAGGCCTCTTTGTGGC...AATGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATAGCACATAGTGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTCTCTGCCCGTCATATTaGTATTCGCAGGTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPLCPSY*YSQVKA
Trigger: AGCTTTCACCTGCGAATACAAATATGACGGGCAGAG...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGTTCTGAATCTGACTTaGCTTCCGGTACAAACAGGC +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPVLNLT*LPVQTG
Trigger: GCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAAC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp AAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCACCTGCCACAGCAGATTaGCTAAAAAGCAAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: KSKGNNNPGVRPTHALYPPATAD*LKSKGN
Trigger: ATTGCCTTTGCTTTTTAGCAAATCTGCTGTGGCAGG...TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 90 bp CATCTACCTCTCCCGGGCAATTTCTCCAGAATTCTCCTGAACAGCTaGTGCACTCTGTTCCAAAGGTTAATGGGAATTAGTTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: HLPLPGNFSRILLNS*CTLFQRLMGISFFW
Trigger: CCAGAAGAAACTAATTCCCATTAACCTTTGGAACAGAGTGCAGCAGCTGTTCAGGAGAATTCTGGAGAAATTGCCCGGGAGAGGTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600055.1
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCTTTACCCTCTTTCTaGGGGTGGAAAAATGACATG +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPALPSF*GWKNDM
Trigger: CATGTCATTTTTCCACCCCAAGAAAGAGGGTAAAGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCTTTACCCTCTTTCTaGGGGTGGAAAAATGACATG +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYALPSF*GWKNDM
Trigger: CATGTCATTTTTCCACCCCAAGAAAGAGGGTAAAGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp TTTATTGAAAGAAATGACGGGATGAATCCCAGACTCCGGAGTAAGCCACCCCCTGCCACAAAGAGGCCTTaGATGATGTCTATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: FIERNDGMNPRLRSKPPPATKRP*MMSIFL
Trigger: CAAGAAGATAGACATCATCAAAGGCCTCTTTGTGGC...AGGGGGTGGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACGCCACAAAGAGGCCTTaGATGATGTCTATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYATKRP*MMSIFL
Trigger: CAAGAAGATAGACATCATCAAAGGCCTCTTTGTGGC...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTAAAAAGCAAAGGCAATAATAACCCTGGGGTCCGTCCAACTCATGCCCTGTACCCTGCCACAGCAGATTaGCTAAAAAGCAAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: LKSKGNNNPGVRPTHALYPATAD*LKSKGN
Trigger: ATTGCCTTTGCTTTTTAGCAAATCTGCTGTGGCAGG...GTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGTCTCTCTGCTGCTATaGGATGCCTCCTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKVSLLL*DASFSG
Trigger: GCCTGAGAAGGAGGCATCCAATAGCAGCAGAGAGAC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CTGACATCTTTCTATCCCAGCCTGTTTTTCTATATGAAGCAAGAGTTGCTCATATCAGAGAGGGAAGCATaGTTCTCAGGAGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: LTSFYPSLFFYMKQELLISEREA*FSGDVA
Trigger: TGCCACATCTCCTGAGAACAATGCTTCCCTCTCTGA...TATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAGATGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp GGTCCTGTTGCCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTGATGGGAGTTTAATCTaGGGGATGCGGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: GPVAILLKGIYNTENKVLDGSLI*GMRLMM
Trigger: CATCATCAGCCGCATCCCCAAGATTAAACTCCCATC...AAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAATTCAGCTTGAGCCAGTaGTGCGATCTCTTGGCGATC +
Preference number: 5 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKFSLSQ*CDLLAI
Trigger: GATCGCCAAGAGATCGCACAACTGGCTCAAGCTGAA...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAATATGGGGCACAGCACTaGAAAACTCTTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKYGAQH*KTLVRA
Trigger: TGCCCGCACAAGAGTTTTCAAGTGCTGTGCCCCATA...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAATCAGAGAGGGAAGCATaGTTCTCAGGAGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKSEREA*FSGDVA
Trigger: TGCCACATCTCCTGAGAACAATGCTTCCCTCTCTGA...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS-3UTR CAA 90 bp CCATATTGCTTAAGGGCATATACAACACTGAAAACAAAGTACTTCCAGGGTAAAGTTCTGAATCTGACTTaGCTTCCGGTACAAACAGGC +
Preference number: 5 (lower is better)
Translates to: PYCLRAYTTLKTKYFQGKVLNLT*LPVQTG
Trigger: GCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAAC...TTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 72 bp CCTTTCTCGGCTGCCTCAGCCCGGACGGACTCCAGCTaGCGACCTTCAGGGGAGAGCGCGGGTGGGGGTGTC +
Preference number: 6 (lower is better)
Translates to: PFSAASARTDSS*RPSGESAGGGV
Trigger: GACACCCCCACCCGCGCTCTCCCCTGAAGGTCGGCAGCTGGAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542460.5
ENST00000597901.1
CDS GCA 72 bp CCCGGGCAACACACTCAGATCCGCCAGGCGCGCCTCTaGAGTCCCAAGTTCGCGCCACGGCATTCGCGCGCA +
Preference number: 6 (lower is better)
Translates to: PGQHTQIRQARL*SPKFAPRHSRA
Trigger: TGCGCGCGAATGCCGTGGCGCGAACTTGGGACTGCAGAGGCGCGCCTGGCGGATCTGAGTGTGTTGCCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000600055.1
CDS GCA 72 bp GTTCTCGGCCACCAGCCCCACGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTCCAGCTGCCGACCTGT +
Preference number: 6 (lower is better)
Translates to: VLGHQPHVAFLG*LSPDGLQLPTC
Trigger: ACAGGTCGGCAGCTGGAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGACGTGGGGCTGGTGGCCGAGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 72 bp GTTCTCGGCCACCAGCCCCACGTCGCCTTTCTCGGCTaGCTCAGCCCGGACGGACTCCAGCTGCCGACCTTC +
Preference number: 6 (lower is better)
Translates to: VLGHQPHVAFLG*LSPDGLQLPTF
Trigger: GAAGGTCGGCAGCTGGAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGACGTGGGGCTGGTGGCCGAGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542460.5
ENST00000597901.1
CDS CCA 72 bp GAGGCAGTGAGCGGAGGTGGTGGCAGCATGAGCCTCTaGGTGCTGCGGCTGTTCTCGGCCACCAGCCCCACG +
Preference number: 6 (lower is better)
Translates to: EAVSGGGGSMSL*VLRLFSATSPT
Trigger: CGTGGGGCTGGTGGCCGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS CAA 90 bp GGGAGGAGGTCTGGAGGCGACAGGGCCACCACGGAGCGCAGCAAGTaGCTCAGCGTCTCCACCATCCGGAGCCGAGCAGACACCTCCTCG +
Preference number: 6 (lower is better)
Translates to: GRRSGGDRATTERSK*LSVSTIRSRADTSS
Trigger: CGAGGAGGTGTCTGCTCGGCTCCGGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGTGGTGGCCCTGTCGCCTCCAGACCTCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 72 bp TGGTGGGAATTCTTGGCCCGGGGGCGTGAGGCTCACTaGCTGGGAGAGGGCAGCCAGCACCGACTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: WWEFLARGREAH*LGEGSQHRLLC
Trigger: GCAGAGCAGTCGGTGCTGGCTGCCCTCTCCCAGGCAGTGAGCCTCACGCCCCCGGGCCAAGAATTCCCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS GCA 72 bp GTGGGGCGAGCCCTCCCGCAGAGCACACTGGGAAAATaGCCGCGCTTTCCCTCGCCCTGGATGAGCGGGTGT +
Preference number: 6 (lower is better)
Translates to: VGRALPQSTLGK*PRFPSPWMSGC
Trigger: ACACCCGCTCATCCAGGGCGAGGGAAAGCGCGGGCATTTTCCCAGTGTGCTCTGCGGGAGGGCTCGCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS TCA 72 bp ACCTTCAGGGGAGAGCGCGGGTGGGGGTGTCGAGGGTaGCAGTTGTGGCTGCGTGTCTCCCTTCTCTCGCGG +
Preference number: 6 (lower is better)
Translates to: TFRGERGWGCRG*QLWLRVSLLSR
Trigger: CCGCGAGAGAAGGGAGACACGCAGCCACAACTGTCACCCTCGACACCCCCACCCGCGCTCTCCCCTGAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542460.5
ENST00000597901.1
CDS GCA 72 bp CTGGAGGCGACAGGGCCACCACGGAGCGCAGCAAGTTaGTCAGCGTCTCCACCATCCGGAGCCGAGCAGACA +
Preference number: 6 (lower is better)
Translates to: LEATGPPRSAAS*SASPPSGAEQT
Trigger: TGTCTGCTCGGCTCCGGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGTGGTGGCCCTGTCGCCTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CAA 72 bp TCTGGAGGCGACAGGGCCACCACGGAGCGCAGCAAGTaGCTCAGCGTCTCCACCATCCGGAGCCGAGCAGAC +
Preference number: 6 (lower is better)
Translates to: SGGDRATTERSK*LSVSTIRSRAD
Trigger: GTCTGCTCGGCTCCGGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGTGGTGGCCCTGTCGCCTCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 72 bp GACGGACTCCAGCTGCCGACCTGTGGCCTGGGCCACTaGCTTGAGAAGGACACCATCACCCACGCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: DGLQLPTCGLGH*LEKDTITHAKL
Trigger: GAGCTTGGCGTGGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACAGGTCGGCAGCTGGAGTCCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 72 bp CTTGCTGAAGACCCCGGAGGCAGTGAGCGGAGGTGGTaGCAGCATGAGCCTCTGGGTGCTGCGGCTGTTCTC +
Preference number: 6 (lower is better)
Translates to: LAEDPGGSERRW*QHEPLGAAAVL
Trigger: GAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACTGCCTCCGGGGTCTTCAGCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS CCA 72 bp AGATGCCCTTGTCACTATCCACCTGCGGAAGCGGGATaGAGACTCCTGCGGTCCAGCCCCAGCGACCCCCTG +
Preference number: 6 (lower is better)
Translates to: RCPCHYPPAEAG*RLLRSSPSDPL
Trigger: CAGGGGGTCGCTGGGGCTGGACCGCAGGAGTCTCCATCCCGCTTCCGCAGGTGGATAGTGACAAGGGCATCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597146.1
CDS TCA 72 bp CACTGGGAAAATGCCCGCGCTTTCCCTCGCCCTGGATaGGCGGGTGTGGCTGAGGGTCTGAGGAGTGACTGG +
Preference number: 6 (lower is better)
Translates to: HWENARAFPRPG*AGVAEGLRSDW
Trigger: CCAGTCACTCCTCAGACCCTCAGCCACACCCGCTCATCCAGGGCGAGGGAAAGCGCGGGCATTTTCCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536218.5
CDS TCA 72 bp GCTTCCGAGCTGGGGAGGCAAAGGGCTTGGTGTATCTaGCCTCGCTGGCTCGTGTGCTCCCATCCCGGAGAG +
Preference number: 6 (lower is better)
Translates to: ASELGRQRAWCI*PRWLVCSHPGE
Trigger: CTCTCCGGGATGGGAGCACACGAGCCAGCGAGGTCAGATACACCAAGCCCTTTGCCTCCCCAGCTCGGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594067.5
ENST00000595758.5
CDS GCA 72 bp CTCAGCTTGCAGTGCTCCGGGAGACGTTCCAGGCCGTaGTCCAGCAGCACGGGGATAATTCGGTCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: LSLQCSGRRSRP*SSSTGIIRSRS
Trigger: CGACCTGGACCGAATTATCCCCGTGCTGCTGGAGCACGGCCTGGAACGTCTCCCGGAGCACTGCAAGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 72 bp TGTCTCCCTTCTCTCGCGGCCTGTGGCCTGGGCCACTaGCTTGAGAAGGACACCATCACCCACGCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: CLPSLAACGLGH*LEKDTITHAKL
Trigger: GAGCTTGGCGTGGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACAGGCCGCGAGAGAAGGGAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS CCA 72 bp GAACTTGCTGAAGACCCCGGAGGCAGTGAGCGGAGGTaGTGGCAGCATGAGCCTCTGGGTGCTGCGGCTGTT +
Preference number: 6 (lower is better)
Translates to: ELAEDPGGSERR*WQHEPLGAAAV
Trigger: AACAGCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACTGCCTCCGGGGTCTTCAGCAAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS CCA 72 bp TCACAGCGCCATCTATCCGCACGTAAGGGCGTGGGCTaGGCAGCACCAGCGCCTGCAGTGAGCAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SQRHLSARKGVG*AAPAPAVSRGR
Trigger: TCTTCCTCTGCTCACTGCAGGCGCTGGTGCTGCCCAGCCCACGCCCTTACGTGCGGATAGATGGCGCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599322.5
CDS CAA 72 bp GAAGCACTGCCAGTGAGCCTGGCGATGTCGCGGAACTaGCTGAAGACCCCGGAGGCAGTGAGCGGAGGTGGT +
Preference number: 6 (lower is better)
Translates to: EALPVSLAMSRN*LKTPEAVSGGG
Trigger: ACCACCTCCGCTCACTGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGCCAGGCTCACTGGCAGTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS CAA 90 bp TTGGCTGTGGAAGCACTGCCAGTGAGCCTGGCGATGTCGCGGAACTaGCTGAAGACCCCGGAGGCAGTGAGCGGAGGTGGTGGCAGCATG +
Preference number: 6 (lower is better)
Translates to: LAVEALPVSLAMSRN*LKTPEAVSGGGGSM
Trigger: CATGCTGCCACCACCTCCGCTCACTGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGCCAGGCTCACTGGCAGTGCTTCCACAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS CAA 90 bp CTTGTGGCGAGTCCCTGCACCTCCCTGTGTCTAACGCTCACCCACTaGGTAGAAATGGCTTGGGGAACGTGCCCCCAGCCACGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LVASPCTSLCLTLTH*VEMAWGTCPQPRWL
Trigger: CAGCCAGCGTGGCTGGGGGCACGTTCCCCAAGCCATTTCTACCAAGTGGGTGAGCGTTAGACACAGGGAGGTGCAGGGACTCGCCACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597901.1
CDS CAA 90 bp ATGGTCCGTTTCGGGAGCTGCTTCCGAGCTGGGGAGGCAAAGGGCTaGGTGTATCTGACCTCGCTGGCTCGTGTGCTCCCATCCCGGAGA +
Preference number: 6 (lower is better)
Translates to: MVRFGSCFRAGEAKG*VYLTSLARVLPSRR
Trigger: TCTCCGGGATGGGAGCACACGAGCCAGCGAGGTCAGATACACCAAGCCCTTTGCCTCCCCAGCTCGGAAGCAGCTCCCGAAACGGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594067.5
ENST00000595758.5
CDS CCA 72 bp GACCTCGCTGATGCCCCGGGTGGGATGGGCCAACATTaGTTTCAGGGGAATCCCTGGGCTCAGCTTGCAGTG +
Preference number: 6 (lower is better)
Translates to: DLADAPGGMGQH*FQGNPWAQLAV
Trigger: CACTGCAAGCTGAGCCCAGGGATTCCCCTGAAACCAATGTTGGCCCATCCCACCCGGGGCATCAGCGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CAA 72 bp TTCGGGAGCTGCTTCCGAGCTGGGGAGGCAAAGGGCTaGGTGTATCTGACCTCGCTGGCTCGTGTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: FGSCFRAGEAKG*VYLTSLARVLP
Trigger: TGGGAGCACACGAGCCAGCGAGGTCAGATACACCAAGCCCTTTGCCTCCCCAGCTCGGAAGCAGCTCCCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594067.5
ENST00000595758.5
CDS TCA 72 bp CTCCTGCAGTTCCTGCTTCGTGGCCACCTCAGGCTCTaGAACGCTTTCCGTCGGGGTCTCTGCTTCTGTGCG +
Preference number: 6 (lower is better)
Translates to: LLQFLLRGHLRL*NAFRRGLCFCA
Trigger: CGCACAGAAGCAGAGACCCCGACGGAAAGCGTTTCAGAGCCTGAGGTGGCCACGAAGCAGGAACTGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536218.5
ENST00000596549.5
CDS GCA 72 bp CCTGCTTCTGCCATCAGCCCCAGTTCCCCAGGACCTTaGATATGGCCTGCAGCTCCTCACTGTCCTCGTCGT +
Preference number: 6 (lower is better)
Translates to: PASAISPSSPGP*IWPAAPHCPRR
Trigger: ACGACGAGGACAGTGAGGAGCTGCAGGCCATATGCAAGGTCCTGGGGAACTGGGGCTGATGGCAGAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 72 bp AAGCGTTTCAGGACCTCGCTGATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGGGGAATCCCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: KRFRTSLMPRVG*ANIGFRGIPGL
Trigger: GAGCCCAGGGATTCCCCTGAAACCAATGTTGGCCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAACGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 72 bp GAGCTCACACCCACTGATGTAGCCTCTGGAAGGCTCTaGGCCCTCTCCCCTTCTCTGCCTGCACACAGTCAC +
Preference number: 6 (lower is better)
Translates to: ELTPTDVASGRL*ALSPSLPAHSH
Trigger: GTGACTGTGTGCAGGCAGAGAAGGGGAGAGGGCCCAGAGCCTTCCAGAGGCTACATCAGTGGGTGTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595758.5
CDS CCA 72 bp CCTCGTCCTCACTCTGCTCTTCCAGGACTTCCTGAATaGTCCGTTTCGGGAGCTGCTTCCGAGCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: PRPHSALPGLPE*SVSGAASELGR
Trigger: CCTCCCCAGCTCGGAAGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGGAAGAGCAGAGTGAGGACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594067.5
ENST00000595758.5
CDS CAA 90 bp AAGGAGCCCACCCGAGGTCCTAGGGCAGGGGCAATTAGGACCAGGTaGTGTCTGCCCCCGACACAACCAGGAAACACATCTACCTCTCCC +
Preference number: 6 (lower is better)
Translates to: KEPTRGPRAGAIRTR*CLPPTQPGNTSTSP
Trigger: GGGAGAGGTAGATGTGTTTCCTGGTTGTGTCGGGGGCAGACACAACCTGGTCCTAATTGCCCCTGCCCTAGGACCTCGGGTGGGCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600055.1
CDS CAA 90 bp ATGGTCCGTTTCGGGAGCTGCTTCCGAGCCCACGATCGGCAGGAGTaGGTGTATAAATACCCCAGCTGCCTCGCATCTCGGGGGTCACTC +
Preference number: 6 (lower is better)
Translates to: MVRFGSCFRAHDRQE*VYKYPSCLASRGSL
Trigger: GAGTGACCCCCGAGATGCGAGGCAGCTGGGGTATTTATACACCAACTCCTGCCGATCGTGGGCTCGGAAGCAGCTCCCGAAACGGACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596104.5
CDS TCA 72 bp GAGCTGCTTCCGAGCTGTGCGACGCTTCGGAATCCCTaGTGGGGAACTGTCCATGGGAGAGGTGTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: ELLPSCATLRNP*WGTVHGRGVRE
Trigger: CTCTCTGACACCTCTCCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGTCGCACAGCTCGGAAGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000593425.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS TCA 72 bp CTCCTGCAGTTCCTGCTTCGTGGCCACCTCAGGCTCTaGAACGCTTTCCGTCGGGGTCTCTGCTTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: LLQFLLRGHLRL*NAFRRGLCFGG
Trigger: ACCTCCAAAGCAGAGACCCCGACGGAAAGCGTTTCAGAGCCTGAGGTGGCCACGAAGCAGGAACTGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000595758.5
ENST00000596104.5
ENST00000599165.5
ENST00000601091.5
ENST00000613670.4
CDS TCA 72 bp CGGGGTCTCTGCTTCTGTGCGACGCTTCGGAATCCCTaGTGGGGAACTGTCCATGGGAGAGGTGTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: RGLCFCATLRNP*WGTVHGRGVRE
Trigger: CTCTCTGACACCTCTCCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGTCGCACAGAAGCAGAGACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536218.5
ENST00000596549.5
CDS TCA 72 bp CGGGGTCTCCTCTTCTGTGCGACGCTTCGGAATCCCTaGTGGGGAACTGTCCATGGGAGAGGTGTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: RGLLFCATLRNP*WGTVHGRGVRE
Trigger: CTCTCTGACACCTCTCCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGTCGCACAGAAGAGGAGACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542460.5
CDS TCA 72 bp AGCCCCCGGCCTTCCTTCCAGGTGGGAAAGGCCATGTaGTTGGAACCCACGCAGCATGTGCAATGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: SPRPSFQVGKAM*LEPTQHVQCLA
Trigger: AGCCAGACATTGCACATGCTGCGTGGGTTCCAATCACATGGCCTTTCCCACCTGGAAGGAAGGCCGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS GCA 72 bp GGTCGGGAACCTCGCAGAACGTCTGCTTCAGGATCATaGCTTGCTCCTCCAGCCACGTCTTTCTGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: GREPRRTSASGS*LAPPATSFWPL
Trigger: CAGAGGCCAGAAAGACGTGGCTGGAGGAGCAAGGCATGATCCTGAAGCAGACGTTCTGCGAGGTTCCCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 72 bp CCTCGTCCTCACTCTGCTCTTCCAGGACTTCCTGAATaGTCCGTTTCGGGAGCTGCTTCCGAGCTGTGCGAC +
Preference number: 6 (lower is better)
Translates to: PRPHSALPGLPE*SVSGAASELCD
Trigger: GTCGCACAGCTCGGAAGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGGAAGAGCAGAGTGAGGACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000593425.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 72 bp CCGCTCAGGGACCTAGCGATGAACCGGGCTTCTGAGTaGCGGCAGGCCACAAAGAGGCCTTTGATGATGTCT +
Preference number: 6 (lower is better)
Translates to: PLRDLAMNRASE*RQATKRPLMMS
Trigger: AGACATCATCAAAGGCCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATCGCTAGGTCCCTGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS CCA 72 bp GACCTCGCTGATGCCCCGGGTGGGATGGGCCAACATTaGTTTCAGGGGAATCCCAGAACGTCTGCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: DLADAPGGMGQH*FQGNPRTSASG
Trigger: TCCTGAAGCAGACGTTCTGGGATTCCCCTGAAACCAATGTTGGCCCATCCCACCCGGGGCATCAGCGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS CCA 72 bp CCTCGTCCTCACTCTGCTCTTCCAGGACTTCCTGAATaGTCCGTTTCGGGAGCTGCTTCCGAGCCCACGATC +
Preference number: 6 (lower is better)
Translates to: PRPHSALPGLPE*SVSGAASEPTI
Trigger: GATCGTGGGCTCGGAAGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGGAAGAGCAGAGTGAGGACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596104.5
CDS CAA 72 bp CCTGTGTCTAACGCTCACCCACTTGGTAGAAATGGCTaGGGGAACGTGCCCCCAGCCACGCTGGCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: PVSNAHPLGRNG*GNVPPATLAVG
Trigger: TCCTACAGCCAGCGTGGCTGGGGGCACGTTCCCCAAGCCATTTCTACCAAGTGGGTGAGCGTTAGACACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597901.1
CDS CAA 72 bp AGTCCCTGCACCTCCCTGTGTCTAACGCTCACCCACTaGGTAGAAATGGCTTGGGGAACGTGCCCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: SPCTSLCLTLTH*VEMAWGTCPQP
Trigger: TGGCTGGGGGCACGTTCCCCAAGCCATTTCTACCAAGTGGGTGAGCGTTAGACACAGGGAGGTGCAGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597901.1
CDS CAA 72 bp TTCGGGAGCTGCTTCCGAGCCCACGATCGGCAGGAGTaGGTGTATAAATACCCCAGCTGCCTCGCATCTCGG +
Preference number: 6 (lower is better)
Translates to: FGSCFRAHDRQE*VYKYPSCLASR
Trigger: CCGAGATGCGAGGCAGCTGGGGTATTTATACACCAACTCCTGCCGATCGTGGGCTCGGAAGCAGCTCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596104.5
CDS CAA 90 bp CTGCACCTCCCTGTGTCTAACGCTCACCCACTTGGTAGAAATGGCTaGGGGAACGTGCCCCCAGCCACGCTGGCTGTAGGAAGTCAGCAA +
Preference number: 6 (lower is better)
Translates to: LHLPVSNAHPLGRNG*GNVPPATLAVGSQQ
Trigger: TTGCTGACTTCCTACAGCCAGCGTGGCTGGGGGCACGTTCCCCAAGCCATTTCTACCAAGTGGGTGAGCGTTAGACACAGGGAGGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597901.1
CDS CAA 90 bp TCTTCACGGACTCGAATAAACCGAGGGAAGCGAAGGGAGATGCCCTaGTCACTATCCACCTGCGGAAGCGGGATGGAGACTCCTGCGGTC +
Preference number: 6 (lower is better)
Translates to: SSRTRINRGKRREMP*SLSTCGSGMETPAV
Trigger: GACCGCAGGAGTCTCCATCCCGCTTCCGCAGGTGGATAGTGACAAGGGCATCTCCCTTCGCTTCCCTCGGTTTATTCGAGTCCGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597146.1
CDS CAA 90 bp TGTGATTGGAACCCACGCAGCATGTGCAATGTCTGGCTCACATCCTaGCAAGGAATCTGGTTGCCTCCCCTCCCTCCTCTGCGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: CDWNPRSMCNVWLTS*QGIWLPPLPPLRPS
Trigger: GGAGGGACGCAGAGGAGGGAGGGGAGGCAACCAGATTCCTTGCAAGGATGTGAGCCAGACATTGCACATGCTGCGTGGGTTCCAATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS CCA 72 bp AAGCGTTTCAGGACCTCGCTGATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGGGGAATCCCAGAACGT +
Preference number: 6 (lower is better)
Translates to: KRFRTSLMPRVG*ANIGFRGIPER
Trigger: ACGTTCTGGGATTCCCCTGAAACCAATGTTGGCCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596672.5
CDS CCA 72 bp AAGCGTTTCAGGACCTCGCTGATGCCCCGGGTGGGATaGGCCAACATTGGTTTCAGGGGAATCCCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: KRFRTSLMPRVG*ANIGFRGIPGK
Trigger: TTTCCCAGGGATTCCCCTGAAACCAATGTTGGCCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS CAA 72 bp GCCGCCTTTGGAGGGGGCTCCGTCTCTCTGCTGCTATaGGATGCCTCCTTCTCAGGCTTCTTTGCTTTACCC +
Preference number: 6 (lower is better)
Translates to: AAFGGGSVSLLL*DASFSGFFALP
Trigger: GGGTAAAGCAAAGAAGCCTGAGAAGGAGGCATCCAATAGCAGCAGAGAGACGGAGCCCCCTCCAAAGGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000263274.12
ENST00000536218.5
ENST00000542460.5
ENST00000593425.5
ENST00000594759.5
ENST00000596549.5
ENST00000599165.5
ENST00000600055.1
ENST00000601091.5
ENST00000613670.4
CDS CAA 72 bp ACCCGAGGTCCTAGGGCAGGGGCAATTAGGACCAGGTaGTGTCTGCCCCCGACACAACCAGGAAACACATCT +
Preference number: 6 (lower is better)
Translates to: TRGPRAGAIRTR*CLPPTQPGNTS
Trigger: AGATGTGTTTCCTGGTTGTGTCGGGGGCAGACACAACCTGGTCCTAATTGCCCCTGCCCTAGGACCTCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600055.1
CDS CAA 90 bp GCGATGAACCGGGCTTCTGAGTGGCGGCAGGCCACAAAGAGGCCTTaGATGATGTCTATCTTCTTGGCTGTGGAAGCACTGCCAGTGAGC +
Preference number: 6 (lower is better)
Translates to: AMNRASEWRQATKRP*MMSIFLAVEALPVS
Trigger: GCTCACTGGCAGTGCTTCCACAGCCAAGAAGATAGACATCATCAAAGGCCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000597901.1
ENST00000601091.5
ENST00000613670.4
CDS TCA 72 bp TTGTGGCTGCGTGTCTCCCTTCTCTCGCGGCCTGGATaGATTTTCTCCAGCTGTGTGTGCTTGTGGCGAGTC +
Preference number: 6 (lower is better)
Translates to: LWLRVSLLSRPG*IFSSCVCLWRV
Trigger: GACTCGCCACAAGCACACACAGCTGGAGAAAATTCATCCAGGCCGCGAGAGAAGGGAGACACGCAGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597901.1
CDS GCA 72 bp GTCCTAGGGCAGGGGCAATTAGGACCAGGTTGTGTCTaGCCCCGACACAACCAGGAAACACATCTACCTCTC +
Preference number: 6 (lower is better)
Translates to: VLGQGQLGPGCV*PRHNQETHLPL
Trigger: GAGAGGTAGATGTGTTTCCTGGTTGTGTCGGGGGCAGACACAACCTGGTCCTAATTGCCCCTGCCCTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600055.1
CDS CCA 72 bp ACAGTTGTGGCTGCGTGTCTCCCTTCTCTCGCGGCCTaGATGAATTTTCTCCAGCTGTGTGTGCTTGTGGCG +
Preference number: 6 (lower is better)
Translates to: TVVAACLPSLAA*MNFLQLCVLVA
Trigger: CGCCACAAGCACACACAGCTGGAGAAAATTCATCCAGGCCGCGAGAGAAGGGAGACACGCAGCCACAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597901.1
CDS CAA 72 bp AACCCACGCAGCATGTGCAATGTCTGGCTCACATCCTaGCAAGGAATCTGGTTGCCTCCCCTCCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: NPRSMCNVWLTS*QGIWLPPLPPL
Trigger: CAGAGGAGGGAGGGGAGGCAACCAGATTCCTTGCAAGGATGTGAGCCAGACATTGCACATGCTGCGTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS GCA 72 bp CACGATCGGCAGGAGTTGGTGTATAAATACCCCAGCTaGCTCGCATCTCGGGGGTCACTCTGGAGCATTTAC +
Preference number: 6 (lower is better)
Translates to: HDRQELVYKYPS*LASRGSLWSIY
Trigger: GTAAATGCTCCAGAGTGACCCCCGAGATGCGAGGCAGCTGGGGTATTTATACACCAACTCCTGCCGATCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596104.5
CDS CCA 72 bp TGCGACGCTTCGGAATCCCTGATGGGGAACTGTCCATaGGAGAGGTGTCAGAGAGGGAAGCATTGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: CDASESLMGNCP*ERCQRGKHCSQ
Trigger: CTGAGAACAATGCTTCCCTCTCTGACACCTCTCCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000593425.5
ENST00000594759.5
ENST00000596549.5
ENST00000601091.5
ENST00000613670.4
CDS CAA 72 bp TCCAGGGCGTGGATCTGTGCCCTCTGCCCGTCATATTaGTATTCGCAGGTGAAAGCTGCCTCCTCAAAGCGT +
Preference number: 6 (lower is better)
Translates to: SRAWICALCPSY*YSQVKAASSKR
Trigger: ACGCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAATATGACGGGCAGAGGGCACAGATCCACGCCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000596457.1
ENST00000596672.5
ENST00000601091.5
ENST00000613670.4
CDS CAA 72 bp ACTCGAATAAACCGAGGGAAGCGAAGGGAGATGCCCTaGTCACTATCCACCTGCGGAAGCGGGATGGAGACT +
Preference number: 6 (lower is better)
Translates to: TRINRGKRREMP*SLSTCGSGMET
Trigger: AGTCTCCATCCCGCTTCCGCAGGTGGATAGTGACAAGGGCATCTCCCTTCGCTTCCCTCGGTTTATTCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597146.1
CDS TCA 72 bp TCTGTGCCCTCTGCCCGTCATATTTGTATTCGCAGGTaGAAGCTGCCTCCTCAAAGCGTTTCAGGACCTCGC +
Preference number: 6 (lower is better)
Translates to: SVPSARHICIRR*KLPPQSVSGPR
Trigger: GCGAGGTCCTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAATATGACGGGCAGAGGGCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000596457.1
ENST00000596672.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 72 bp CCTCTGCCCGTCATATTTGTATTCGCAGGTGAAAGCTaGCTCCTCAAAGCGTTTCAGGACCTCGCTGATGCC +
Preference number: 6 (lower is better)
Translates to: PLPVIFVFAGES*LLKAFQDLADA
Trigger: GGCATCAGCGAGGTCCTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAATATGACGGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000594067.5
ENST00000594759.5
ENST00000596457.1
ENST00000596672.5
ENST00000601091.5
ENST00000613670.4
CDS GCA 72 bp AATTTTCTCCAGCTGTGTGTGCTTGTGGCGAGTCCCTaGACCTCCCTGTGTCTAACGCTCACCCACTTGGTA +
Preference number: 6 (lower is better)
Translates to: NFLQLCVLVASP*TSLCLTLTHLV
Trigger: TACCAAGTGGGTGAGCGTTAGACACAGGGAGGTGCAGGGACTCGCCACAAGCACACACAGCTGGAGAAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597901.1
CDS CCA 72 bp GGGATGATAGTTGTTCTTGGCAGGATTGTAACCAGATaGATCCAGGGGTCCCTCAGCAGCTCCCTCCTTTCC +
Preference number: 6 (lower is better)
Translates to: GMIVVLGRIVTR*IQGSLSSSLLS
Trigger: GGAAAGGAGGGAGCTGCTGAGGGACCCCTGGATCCATCTGGTTACAATCCTGCCAAGAACAACTATCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS CCA 72 bp AGAGGAGAGGGAAGGCAATGGATTAGAGGGGGAACATaGAGAGGAGAACTGCTAATGGGCCCCAGGACCATT +
Preference number: 6 (lower is better)
Translates to: RGEGRQWIRGGT*RGELLMGPRTI
Trigger: AATGGTCCTGGGGCCCATTAGCAGTTCTCCTCTCCATGTTCCCCCTCTAATCCATTGCCTTCCCTCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS CAA 90 bp TCTGCGTCCCTCCTCCCACAATTAGAACAGGGAAGTGAGCCACATTaGATCACAGACATTGGGGTGACAACCTTTGGAGGGCAGAGGGAC +
Preference number: 6 (lower is better)
Translates to: SASLLPQLEQGSEPH*ITDIGVTTFGGQRD
Trigger: GTCCCTCTGCCCTCCAAAGGTTGTCACCCCAATGTCTGTGATCAAATGTGGCTCACTTCCCTGTTCTAATTGTGGGAGGAGGGACGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS GCA 72 bp TGGGAAAGGCCATGTGATTGGAACCCACGCAGCATGTaGAATGTCTGGCTCACATCCTTGCAAGGAATCTGG +
Preference number: 6 (lower is better)
Translates to: WERPCDWNPRSM*NVWLTSLQGIW
Trigger: CCAGATTCCTTGCAAGGATGTGAGCCAGACATTGCACATGCTGCGTGGGTTCCAATCACATGGCCTTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS GCA 72 bp CGTTCCCCAGAGAATCCCACAAAACTAAGCTCCAGCTaGCCAACACATAGCAGACCCAACAGCACATCCTGT +
Preference number: 6 (lower is better)
Translates to: RSPENPTKLSSS*PTHSRPNSTSC
Trigger: ACAGGATGTGCTGTTGGGTCTGCTATGTGTTGGGCAGCTGGAGCTTAGTTTTGTGGGATTCTCTGGGGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596104.5
CDS CCA 72 bp TCCAGCAGGCATCTTCCACGGGATGATAGTTGTTCTTaGCAGGATTGTAACCAGATGGATCCAGGGGTCCCT +
Preference number: 6 (lower is better)
Translates to: SSRHLPRDDSCS*QDCNQMDPGVP
Trigger: AGGGACCCCTGGATCCATCTGGTTACAATCCTGCCAAGAACAACTATCATCCCGTGGAAGATGCCTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263274.12
ENST00000427526.6
ENST00000536218.5
ENST00000542460.5
ENST00000594067.5
ENST00000594759.5
ENST00000601091.5
ENST00000613670.4
CDS TCA 72 bp CTCTGCGTCCCTCCTCCCACAATTAGAACAGGGAAGTaGGCCACATTTGATCACAGACATTGGGGTGACAAC +
Preference number: 6 (lower is better)
Translates to: LCVPPPTIRTGK*ATFDHRHWGDN
Trigger: GTTGTCACCCCAATGTCTGTGATCAAATGTGGCTCACTTCCCTGTTCTAATTGTGGGAGGAGGGACGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS CAA 72 bp CTCCTCCCACAATTAGAACAGGGAAGTGAGCCACATTaGATCACAGACATTGGGGTGACAACCTTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: LLPQLEQGSEPH*ITDIGVTTFGG
Trigger: CCCTCCAAAGGTTGTCACCCCAATGTCTGTGATCAAATGTGGCTCACTTCCCTGTTCTAATTGTGGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596457.1
CDS GCA 72 bp CTCCCGGGCAATTTCTCCAGAATTCTCCTGAACAGCTaGTGCACTCTGTTCCAAAGGTTAATGGGAATTAGT +
Preference number: 6 (lower is better)
Translates to: LPGNFSRILLNS*CTLFQRLMGIS
Trigger: ACTAATTCCCATTAACCTTTGGAACAGAGTGCAGCAGCTGTTCAGGAGAATTCTGGAGAAATTGCCCGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600055.1
CDS CCA 72 bp GGACTGTTTCCTGATCCACATGACGGGGCCGAACGATaGGTTGTCATAAGGATTAAACAAGTTGACAAAGTG +
Preference number: 6 (lower is better)
Translates to: GLFPDPHDGAER*VVIRIKQVDKV
Trigger: CACTTTGTCAACTTGTTTAATCCTTATGACAACCCATCGTTCGGCCCCGTCATGTGGATCAGGAAACAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597146.1
CDS GCA 72 bp CCGGGCAATTTCTCCAGAATTCTCCTGAACAGCTGCTaGACTCTGTTCCAAAGGTTAATGGGAATTAGTTTC +
Preference number: 6 (lower is better)
Translates to: PGNFSRILLNSC*TLFQRLMGISF
Trigger: GAAACTAATTCCCATTAACCTTTGGAACAGAGTGCAGCAGCTGTTCAGGAGAATTCTGGAGAAATTGCCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600055.1