RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LIFR (Homo sapiens)

Ensembl gene IDs: ENSG00000113594

Ensembl transcript IDs: ENST00000263409.8, ENST00000453190.7, ENST00000503088.1, ENST00000506003.5, ENST00000506990.5, ENST00000507786.1, ENST00000508477.5, ENST00000511561.1, ENST00000512723.1

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATGAGTGGGAGGAACATCCACCAGAAGGTGTCAAAGATCACCACTaGCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTCAGGAGGAAC +
Preference number: 1 (lower is better)
Translates to: HEWEEHPPEGVKDHH*LGSQAQRHGLLRRN
Trigger: GTTCCTCCTGAGGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTTCTGGTGGATGTTCCTCCCACTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp ATGCTAACAGCAAGCTTTGGCAGGGAGAGAAGGCAGCCCCAGGTCTaGTGTCTGGGGTGGAAGCTAAGGGAAGGAGCCAAAGAGGATACA +
Preference number: 1 (lower is better)
Translates to: MLTASFGRERRQPQV*CLGWKLREGAKEDT
Trigger: TGTATCCTCTTTGGCTCCTTCCCTTAGCTTCCACCCCAGACATCAGACCTGGGGCTGCCTTCTCTCCCTGCCAAAGCTTGCTGTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 90 bp AGTGGGAGGAACATCCACCAGAAGGTGTCAAAGATCACCACTGCCTaGGTAGCCAAGCTCAACGGCATGGTCTCCTCAGGAGGAACGAAA +
Preference number: 1 (lower is better)
Translates to: SGRNIHQKVSKITTA*VAKLNGMVSSGGTK
Trigger: TTTCGTTCCTCCTGAGGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTTCTGGTGGATGTTCCTCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 90 bp GAAACAAGGGTGGGCAGAGGATGCTGTGCTGAAGGCAATCAATTCTaGACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGC +
Preference number: 1 (lower is better)
Translates to: ETRVGRGCCAEGNQF*TAHQAIAAPATQVC
Trigger: GCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAGAATTGATTGCCTTCAGCACAGCATCCTCTGCCCACCCTTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp CAGACATCGCTTATGAGAAACAAGGGTGGGCAGAGGATGCTGTGCTaGAGGCAATCAATTCTGCACAGCTCACCAAGCAATTGCTGCACC +
Preference number: 1 (lower is better)
Translates to: QTSLMRNKGGQRMLC*RQSILHSSPSNCCT
Trigger: GGTGCAGCAATTGCTTGGTGAGCTGTGCAGAATTGATTGCCTTCAGCACAGCATCCTCTGCCCACCCTTGTTTCTCATAAGCGATGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 90 bp TTAACCTCACACACGGACACACTGTTGGGCAGAACACATGCTGGCTaGTACAAACATGCCCCAGTTGCACACCCATCAAAGAAGAAGAAA +
Preference number: 1 (lower is better)
Translates to: LTSHTDTLLGRTHAG*YKHAPVAHPSKKKK
Trigger: TTTCTTCTTCTTTGATGGGTGTGCAACTGGGGCATGTTTGTACCAGCCAGCATGTGTTCTGCCCAACAGTGTGTCCGTGTGTGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp TCCTTCTGCTTTTCCAAGAACCACAATCACTCCAGACATCGCTTATaGGAAACAAGGGTGGGCAGAGGATGCTGTGCTGAAGGCAATCAA +
Preference number: 1 (lower is better)
Translates to: SFCFSKNHNHSRHRL*ETRVGRGCCAEGNQ
Trigger: TTGATTGCCTTCAGCACAGCATCCTCTGCCCACCCTTGTTTCTCATAAGCGATGTCTGGAGTGATTGTGGTTCTTGGAAAAGCAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 90 bp CACGGACACACTGTTGGGCAGAACACATGCTGGCTGGTACAAACATaGCCCAGTTGCACACCCATCAAAGAAGAAGAAATTATGAACACT +
Preference number: 1 (lower is better)
Translates to: HGHTVGQNTCWLVQT*PSCTPIKEEEIMNT
Trigger: AGTGTTCATAATTTCTTCTTCTTTGATGGGTGTGCAACTGGGGCATGTTTGTACCAGCCAGCATGTGTTCTGCCCAACAGTGTGTCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp CCTCCTAACAATACTTCACAGGATCCCTCCAAGAATGCCCAGTGCTaGTGTAGCAACACTAGCAGTAAGAGCTTATTGAGATGGCTGACT +
Preference number: 1 (lower is better)
Translates to: PPNNTSQDPSKNAQC*CSNTSSKSLLRWLT
Trigger: AGTCAGCCATCTCAATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGATCCTGTGAAGTATTGTTAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp CTCCCTGGCCTGCAAATCCACTTACAATTCCACCAAGTATACACATaGGAAAACCACAAACAACAGAACAGAAAACAGTTGCGGCGGGAT +
Preference number: 1 (lower is better)
Translates to: LPGLQIHLQFHQVYT*ENHKQQNRKQLRRD
Trigger: ATCCCGCCGCAACTGTTTTCTGTTCTGTTGTTTGTGGTTTTCTCATGTGTATACTTGGTGGAATTGTAAGTGGATTTGCAGGCCAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp GCTGCACCTGCAACACAGGTATGCCCATGGATTCAGATCAGTTTATaGCAGTTACTAAGAAACAGCCCTTGGGTAACTGTTCCTGTAAGA +
Preference number: 1 (lower is better)
Translates to: AAPATQVCPWIQISL*QLLRNSPWVTVPVR
Trigger: TCTTACAGGAACAGTTACCCAAGGGCTGTTTCTTAGTAACTGTCATAAACTGATCTGAATCCATGGGCATACCTGTGTTGCAGGTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp GCCAGGAAGGGCATCAATCACATAACACCTACCCCTCCACAACAATaGAAGGTTTCTTTTTCGTGTTGTCTCCCGCTACTCACAATGTTA +
Preference number: 1 (lower is better)
Translates to: ARKGINHITPTPPQQ*KVSFSCCLPLLTML
Trigger: TAACATTGTGAGTAGCGGGAGACAACACGAAAAAGAAACCTTTCATTGTTGTGGAGGGGTAGGTGTTATGTGATTGATGCCCTTCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp ACCTGGTCGAAACTCATCAGATTCTATTACAGTTTCAGTGCTGTTTaGGGGAACTTTTCTCCAGTCCATAAGGCATGGTTCCGACCGAGA +
Preference number: 1 (lower is better)
Translates to: TWSKLIRFYYSFSAV*GNFSPVHKAWFRPR
Trigger: TCTCGGTCGGAACCATGCCTTATGGACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCTGATGAGTTTCGACCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR CCA 90 bp ACGGCATGGTCTCCTCAGGAGGAACGAAATCCAATCAGAACTATATaGACAGCTAACGCTGCTAGATATTGCTTAGTAGTCATCTCACAT +
Preference number: 1 (lower is better)
Translates to: TAWSPQEERNPIRTI*TANAARYCLVVISH
Trigger: ATGTGAGATGACTACTAAGCAATATCTAGCAGCGTTAGCTGTCCATATAGTTCTGATTGGATTTCGTTCCTCCTGAGGAGACCATGCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 90 bp AATCTAACTGGACAGAGCACAATCAGTATGAGACCACCTTGTAAATaGAGGCATGCAACCTTCATTGACAAACAGCGCACATTTACCAGT +
Preference number: 1 (lower is better)
Translates to: NLTGQSTISMRPPCK*RHATFIDKQRTFTS
Trigger: ACTGGTAAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCTCATACTGATTGTGCTCTGTCCAGTTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 90 bp TTGGAAAATGAGGTTGATACTTCCTCTCTTAAGCTTCTCAGTGAATaGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCA +
Preference number: 1 (lower is better)
Translates to: LENEVDTSSLKLLSE*LLLFLSCRNKAPLS
Trigger: TGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACTGAGAAGCTTAAGAGAGGAAGTATCAACCTCATTTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 90 bp AGGCAAATAAACTTCACCTGTTACTTGGACATTTTCTCCCTGGCCTaGAAATCCACTTACAATTCCACCAAGTATACACATGAGAAAACC +
Preference number: 1 (lower is better)
Translates to: RQINFTCYLDIFSLA*KSTYNSTKYTHEKT
Trigger: GGTTTTCTCATGTGTATACTTGGTGGAATTGTAAGTGGATTTGCAGGCCAGGGAGAAAATGTCCAAGTAACAGGTGAAGTTTATTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 90 bp GTGTGTATCACCCTTCAGGAAAATTCTGTTGAATCTGTGACACTCTaGGATAGGACTCAGTCAAGAAAATTAGTTACTGAGCTTTCACGA +
Preference number: 1 (lower is better)
Translates to: VCITLQENSVESVTL*DRTQSRKLVTELSR
Trigger: TCGTGAAAGCTCAGTAACTAATTTTCTTGACTGAGTCCTATCCCAGAGTGTCACAGATTCAACAGAATTTTCCTGAAGGGTGATACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp AAAGGGCCCTGGATCCAGATGGTCACAGTTGAAATGCATATATATTaGCAGACAGAGATCAAACAATCTCTTCTGGCCTTTTCTCATTAT +
Preference number: 1 (lower is better)
Translates to: KGPWIQMVTVEMHIY*QTEIKQSLLAFSHY
Trigger: ATAATGAGAAAAGGCCAGAAGAGATTGTTTGATCTCTGTCTGTCAATATATATGCATTTCAACTGTGACCATCTGGATCCAGGGCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp TTTCACTCAAACCGTGGAGTCACTTCCGAAGTAGATTTGAATCTTTaGGTCAATAGTCTCAGATCCACACAAGCTAGATTTTGGTGTGTA +
Preference number: 1 (lower is better)
Translates to: FHSNRGVTSEVDLNL*VNSLRSTQARFWCV
Trigger: TACACACCAAAATCTAGCTTGTGTGGATCTGAGACTATTGACTCAAAGATTCAAATCTACTTCGGAAGTGACTCCACGGTTTGAGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp CTTGAAATGCTTCTTGAAGGTAGAGTACATGAGAATTCTTTGGCTTaGTCACAAAGAGCTCCCAATCTTGAGTTTTGTGGATTGAGGATT +
Preference number: 1 (lower is better)
Translates to: LEMLLEGRVHENSLA*SQRAPNLEFCGLRI
Trigger: AATCCTCAATCCACAAAACTCAAGATTGGGAGCTCTTTGTGATCAAGCCAAAGAATTCTCATGTACTCTACCTTCAAGAAGCATTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp TCGTTATATAGGTTAGAAAGGGCCCTGGATCCAGATGGTCACAGTTaGAATGCATATATATTGACAGACAGAGATCAAACAATCTCTTCT +
Preference number: 1 (lower is better)
Translates to: SLYRLERALDPDGHS*NAYILTDRDQTISS
Trigger: AGAAGAGATTGTTTGATCTCTGTCTGTCAATATATATGCATTTCAACTGTGACCATCTGGATCCAGGGCCCTTTCTAACCTATATAACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 90 bp ATAAGCCCCATAATGATCTCCATTCCTCGCAAGGGAAGCTTGATTTaGAACTGGCTTGTAAGTGAATTGACTTGTAAGAGAGGTAAAAAT +
Preference number: 1 (lower is better)
Translates to: ISPIMISIPRKGSLI*NWLVSELTCKRGKN
Trigger: ATTTTTACCTCTCTTACAAGTCAATTCACTTACAAGCCAGTTTCAAATCAAGCTTCCCTTGCGAGGAATGGAGATCATTATGGGGCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 90 bp CGAAATCCAATCAGAACTATATGGACAGCTAACGCTGCTAGATATTaGTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATGCT +
Preference number: 1 (lower is better)
Translates to: RNPIRTIWTANAARY*LVVISHSKSLELHA
Trigger: AGCATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGCGTTAGCTGTCCATATAGTTCTGATTGGATTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 90 bp AAATGTAATCTTTCAGATCCACGAGCGGTGAAAGTAATGCTGGTTTaGAAAATGAGGTTGATACTTCCTCTCTTAAGCTTCTCAGTGAAT +
Preference number: 1 (lower is better)
Translates to: KCNLSDPRAVKVMLV*KMRLILPLLSFSVN
Trigger: ATTCACTGAGAAGCTTAAGAGAGGAAGTATCAACCTCATTTTCCAAACCAGCATTACTTTCACCGCTCGTGGATCTGAAAGATTACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 90 bp ATGTCTGTAGTGGTAACATTTCAAGAAATGAAAAAGGGAACAGTTTaGGATCCGCAGTTTCTCCCTATCTTCTTTCAGCTACATTTACAA +
Preference number: 1 (lower is better)
Translates to: MSVVVTFQEMKKGTV*DPQFLPIFFQLHLQ
Trigger: TTGTAAATGTAGCTGAAAGAAGATAGGGAGAAACTGCGGATCCCAAACTGTTCCCTTTTTCATTTCTTGAAATGTTACCACTACAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 90 bp AATTTGGTGCAACAATGGGAGCCAATTCTTCTATATATCCAATCATaGAGCGTAATAATTGATATCCTTGATTTCTGCATCCATACAGGA +
Preference number: 1 (lower is better)
Translates to: NLVQQWEPILLYIQS*SVIIDILDFCIHTG
Trigger: TCCTGTATGGATGCAGAAATCAAGGATATCAATTATTACGCTCCATGATTGGATATATAGAAGAATTGGCTCCCATTGTTGCACCAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR-3UTR TCA 90 bp GCATGGTTCCGACCGAGACGAGTTACACCACTTAATGACGTAGTCGCAAGTCATGGTCGTAATGCCAGGTaGGGAGAATCCCCTTTCCCA +
Preference number: 2 (lower is better)
Translates to: AWFRPRRVTPLNDVVASHGRNAR*GESPFP
Trigger: TGGGAAAGGGGATTCTCCTCACCTGGCATTACGACC...ATGACTTGCGACTACGTCATTAAGTGGTGTAACTCGTCTCGGTCGGAACCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR-3UTR CCA 90 bp GACGTAGTCGCAAGTCATGTTGGGGTCGTAATGCCAGGTGAGGAGAATCCCCTTCCATACTCGCTATTTTaGAAGGTGGTGATGAGCCCA +
Preference number: 2 (lower is better)
Translates to: DVVASHVGVVMPGEENPLPYSLF*KVVMSP
Trigger: TGGGCTCATCACCACCTTCCAAAATAGCGAGTATGG...AAGGGGATTCTCCTCACCTGGCATTACGACCCCAACATGACTTGCGACTACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR-3UTR TCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCAAGAGCTCCCAATCTTaGGTTTTGTGGATTGAGGAT +
Preference number: 2 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSKSSQS*VLWIED
Trigger: ATCCTCAATCCACAAAACTCAAGATTGGGAGCTCTT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCATTTTCTCCCTGGCCTaGAAATCCACTTACAATTCC +
Preference number: 2 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSIFSLA*KSTYNS
Trigger: GGAATTGTAAGTGGATTTGCAGGCCAGGGAGAAAAT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATAAGAGCTTATTGAGATaGCTGACTGAAGTGACACGG +
Preference number: 2 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDKSLLR*LTEVTR
Trigger: CCGTGTCACTTCAGTCAGCCATCTCAATAAGCTCTT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCATTGAGATGGCTGACTaGAGTGACACGGTGACACTG +
Preference number: 2 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVIEMAD*SDTVTL
Trigger: CAGTGTCACCGTGTCACTTCAGTCAGCCATCTCAAT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCAACATGATTATGATTTaGGCTGGTCAGTGTCACACT +
Preference number: 2 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSNMIMI*AGQCHT
Trigger: AGTGTGACACTGACCAGCCCAAATCATAATCATGTT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATCCAATCAGAACTATATaGACAGCTAACGCTGCTAGA +
Preference number: 2 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDPIRTI*TANAAR
Trigger: TCTAGCAGCGTTAGCTGTCCATATAGTTCTGATTGG...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAAAGATCACCACTGCCTaGGTAGCCAAGCTCAACGGC +
Preference number: 2 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGKITTA*VAKLNG
Trigger: GCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGTATGAGAAACAAGGGTaGGCAGAGGATGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: VASKGEATNLTGQSTISMYEKQG*AEDAVL
Trigger: CAGCACAGCATCCTCTGCCCACCCTTGTTTCTCATA...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATCACCAAGTATACACATaGGAAAACCACAAACAACAG +
Preference number: 2 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDHQVYT*ENHKQQ
Trigger: CTGTTGTTTGTGGTTTTCTCATGTGTATACTTGGTG...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATAGAACAGAAAACAGTTaGGGCGGGATTTGTTTTACA +
Preference number: 2 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDRTENS*GGICFT
Trigger: TGTAAAACAAATCCCGCCGCAACTGTTTTCTGTTCT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATAGCAATTGCTGCACCTaGAACACAGGTATGCCCATG +
Preference number: 2 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYSNCCT*NTGMPM
Trigger: CATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTCAGAGGATGCTGTGCTaGAGGCAATCAATTCTGCAC +
Preference number: 2 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFQRMLC*RQSILH
Trigger: GTGCAGAATTGATTGCCTTCAGCACAGCATCCTCTG...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGAACAAGGCAGGAGTTaGGGGCAAGCAGACAATGCT +
Preference number: 2 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPEQGRS*GQADNA
Trigger: AGCATTGTCTGCTTGCCCTCAACTCCTGCCTTGTTC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATAACGCTGCTAGATATTaGTTAGTAGTCATCTCACAT +
Preference number: 2 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDNAARY*LVVISH
Trigger: ATGTGAGATGACTACTAAGCAATATCTAGCAGCGTT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATCCTGCAACACAGGTATaGCCATGGATTCAGATCAGT +
Preference number: 2 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYPATQV*PWIQIS
Trigger: ACTGATCTGAATCCATGGGCATACCTGTGTTGCAGG...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATATTGAGATGGCTGACTaGAGTGACACGGTGACACTG +
Preference number: 2 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYIEMAD*SDTVTL
Trigger: CAGTGTCACCGTGTCACTTCAGTCAGCCATCTCAAT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTAAGAATGCCCAGTGCTaGTGTAGCAACACTAGCAGT +
Preference number: 2 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFKNAQC*CSNTSS
Trigger: ACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCCAAAGTTTGTACCCCTaGGACAACTGTTTGATAACC +
Preference number: 2 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVQSLYP*DNCLIT
Trigger: GGTTATCAAACAGTTGTCTCAGGGGTACAAACTTTG...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTCAGAGGATGCTGTGCTaGAGGCAATCAATTCTGCAC +
Preference number: 2 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPQRMLC*RQSILH
Trigger: GTGCAGAATTGATTGCCTTCAGCACAGCATCCTCTG...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAGACAACTGAACATGTaGCCAATCTCCTTCCAACTT +
Preference number: 2 (lower is better)
Translates to: VASKGEATNLTGQSTISMRQLNM*PISFQL
Trigger: AAGTTGGAAGGAGATTGGTCACATGTTCAGTTGTCT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAGTATCTCAGACAACTaGACATGTGACCAATCTCCT +
Preference number: 2 (lower is better)
Translates to: VASKGEATNLTGQSTISMSISDN*TCDQSP
Trigger: AGGAGATTGGTCACATGTTCAGTTGTCTGAGATACT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGTCAAAGATCACCACTaGCTGGGTAGCCAAGCTCAA +
Preference number: 2 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYVKDHH*LGSQAQ
Trigger: TTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGAC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGCTAAGAAACAGCCCTTaGGTAACTGTTCCTGTAAGA +
Preference number: 2 (lower is better)
Translates to: VASKGEATNLTGQSTISMLRNSP*VTVPVR
Trigger: TCTTACAGGAACAGTTACCCAAGGGCTGTTTCTTAG...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTTATGAGAAACAAGGGTaGGCAGAGGATGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPYEKQG*AEDAVL
Trigger: CAGCACAGCATCCTCTGCCCACCCTTGTTTCTCATA...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGGCCCTGGATCCAGATaGTCACAGTTGAAATGCATA +
Preference number: 2 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFGPGSR*SQLKCI
Trigger: TATGCATTTCAACTGTGACCATCTGGATCCAGGGCC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 90 bp TCAGATCCACGAGCGGTGAAAGTAATGCTGGTTTGGAAAATGAGGTaGATACTTCCTCTCTTAAGCTTCTCAGTGAATGGCTGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: SDPRAVKVMLVWKMR*ILPLLSFSVNGCFC
Trigger: ACAGAAGCAGCCATTCACTGAGAAGCTTAAGAGAGGAAGTATCAACCTCATTTTCCAAACCAGCATTACTTTCACCGCTCGTGGATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATATTTTCTCCCTGGCCTaGAAATCCACTTACAATTCC +
Preference number: 2 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYIFSLA*KSTYNS
Trigger: GGAATTGTAAGTGGATTTGCAGGCCAGGGAGAAAAT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTTCACCAAGCAATTGCTaGACCTGCAACACAGGTATG +
Preference number: 2 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPSPSNC*TCNTGM
Trigger: CATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGA...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGGATTATGATTTGGGCTaGTCAGTGTCACACTTGTTT +
Preference number: 2 (lower is better)
Translates to: VASKGEATNLTGQSTISMDYDLG*SVSHLF
Trigger: AAACAAGTGTGACACTGACCAGCCCAAATCATAATC...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAGAGAATTCTTTGGCTTaGTCACAAAGAGCTCCCAAT +
Preference number: 2 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGENSLA*SQRAPN
Trigger: ATTGGGAGCTCTTTGTGATCAAGCCAAAGAATTCTC...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTAGACAACTGAACATGTaGCCAATCTCCTTCCAACTT +
Preference number: 2 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFRQLNM*PISFQL
Trigger: AAGTTGGAAGGAGATTGGTCACATGTTCAGTTGTCT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTAGTATCTCAGACAACTaGACATGTGACCAATCTCCT +
Preference number: 2 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFSISDN*TCDQSP
Trigger: AGGAGATTGGTCACATGTTCAGTTGTCTGAGATACT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGCATGCAACCTTCATTaGCAAACAGCGCACATTTAC +
Preference number: 2 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYACNLH*QTAHIY
Trigger: GTAAATGTGCGCTGTTTGTCAATGAAGGTTGCATGC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTAAGAGCTTATTGAGATaGCTGACTGAAGTGACACGG +
Preference number: 2 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPKSLLR*LTEVTR
Trigger: CCGTGTCACTTCAGTCAGCCATCTCAATAAGCTCTT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGAAAAGACTCATGAGTaGGAGGAACATCCACCAGAA +
Preference number: 2 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPEKTHE*EEHPPE
Trigger: TTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCAAAGTTTGTACCCCTaGGACAACTGTTTGATAACC +
Preference number: 2 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYQSLYP*DNCLIT
Trigger: GGTTATCAAACAGTTGTCTCAGGGGTACAAACTTTG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAATTAGGGCAACCAACTaGAATAATGGAAGCAAGCAT +
Preference number: 2 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGIRATN*NNGSKH
Trigger: ATGCTTGCTTCCATTATTTCAGTTGGTTGCCCTAAT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGATAAAGTACGGGATTaGTACATTTCAACAGGGAAC +
Preference number: 2 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFDKVRD*YISTGN
Trigger: GTTCCCTGTTGAAATGTATCAATCCCGTACTTTATC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATAACGCTGCTAGATATTaGTTAGTAGTCATCTCACAT +
Preference number: 2 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYNAARY*LVVISH
Trigger: ATGTGAGATGACTACTAAGCAATATCTAGCAGCGTT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATAAGAATGCCCAGTGCTaGTGTAGCAACACTAGCAGT +
Preference number: 2 (lower is better)
Translates to: AARYCLVVISHSKSLELHKNAQC*CSNTSS
Trigger: ACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTCCAGATGGTCACAGTTaGAATGCATATATATTGACA +
Preference number: 2 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFPDGHS*NAYILT
Trigger: TGTCAATATATATGCATTTCAACTGTGACCATCTGG...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACCAGATGGTCACAGTTaGAATGCATATATATTGACA +
Preference number: 2 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGPDGHS*NAYILT
Trigger: TGTCAATATATATGCATTTCAACTGTGACCATCTGG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATAAAGTAGGGGAAAGGTaGGTGATATTCTGCACTTTT +
Preference number: 2 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYKVGER*VIFCTF
Trigger: AAAAGTGCAGAATATCACTCACCTTTCCCCTACTTT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATAACATGATTATGATTTaGGCTGGTCAGTGTCACACT +
Preference number: 2 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYNMIMI*AGQCHT
Trigger: AGTGTGACACTGACCAGCCCAAATCATAATCATGTT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGATGGTCACAGTTGAAATaGATATATATTGACAGACAG +
Preference number: 2 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGWSQLK*IYIDRQ
Trigger: CTGTCTGTCAATATATATGCATTTCAACTGTGACCA...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR GCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAGACCACCTTGTAAATaGAGGCATGCAACCTTCATT +
Preference number: 2 (lower is better)
Translates to: IQILRATISNLGLYKFNKRPPCK*RHATFI
Trigger: AATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATTACATGAGAATTCTTTaGCTTGATCACAAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYYMRIL*LDHKEL
Trigger: GAGCTCTTTGTGATCAAGCCAAAGAATTCTCATGTA...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATTGGACATTTTCTCCCTaGCCTGCAAATCCACTTACA +
Preference number: 2 (lower is better)
Translates to: AARYCLVVISHSKSLELHWTFSP*PANPLT
Trigger: TGTAAGTGGATTTGCAGGCCAGGGAGAAAATGTCCA...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCTGGATCAGATAATGTaGCATGATGAAAAGACTCAT +
Preference number: 2 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYLDQIM*HDEKTH
Trigger: ATGAGTCTTTTCATCATGCCACATTATCTGATCCAG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 90 bp GACATAAATCACATTCTTTTAAGCACACAGCAACTTATAAGGAGCTaGCCCAGACTTAATAGCGTTACTCTGCTTCTCATTAAGCTAGTG +
Preference number: 2 (lower is better)
Translates to: DINHILLSTQQLIRS*PRLNSVTLLLIKLV
Trigger: CACTAGCTTAATGAGAAGCAGAGTAACGCTATTAAGTCTGGGCAAGCTCCTTATAAGTTGCTGTGTGCTTAAAAGAATGTGATTTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAGATTATGATTTGGGCTaGTCAGTGTCACACTTGTTT +
Preference number: 2 (lower is better)
Translates to: IQILRATISNLGLYKFNKDYDLG*SVSHLF
Trigger: AAACAAGTGTGACACTGACCAGCCCAAATCATAATC...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 90 bp CCCATGGATTCAGATCAGTTTATGACAGTTACTAAGAAACAGCCCTaGGGTAACTGTTCCTGTAAGAAGCATTCTCTCTTTAGTTTTATA +
Preference number: 2 (lower is better)
Translates to: PMDSDQFMTVTKKQP*GNCSCKKHSLFSFI
Trigger: TATAAAACTAAAGAGAGAATGCTTCTTACAGGAACAGTTACCCAAGGGCTGTTTCTTAGTAACTGTCATAAACTGATCTGAATCCATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATCACCAAGTATACACATaGGAAAACCACAAACAACAG +
Preference number: 2 (lower is better)
Translates to: AARYCLVVISHSKSLELHHQVYT*ENHKQQ
Trigger: CTGTTGTTTGTGGTTTTCTCATGTGTATACTTGGTG...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATATTAGGGCAACCAACTaGAATAATGGAAGCAAGCAT +
Preference number: 2 (lower is better)
Translates to: AARYCLVVISHSKSLELHIRATN*NNGSKH
Trigger: ATGCTTGCTTCCATTATTTCAGTTGGTTGCCCTAAT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATTACATGAGAATTCTTTaGCTTGATCACAAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: AARYCLVVISHSKSLELHYMRIL*LDHKEL
Trigger: GAGCTCTTTGTGATCAAGCCAAAGAATTCTCATGTA...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 72 bp GAGGAACATCCACCAGAAGGTGTCAAAGATCACCACTaGCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTC +
Preference number: 3 (lower is better)
Translates to: EEHPPEGVKDHH*LGSQAQRHGLL
Trigger: GAGGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTTCTGGTGGATGTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 72 bp AACATCCACCAGAAGGTGTCAAAGATCACCACTGCCTaGGTAGCCAAGCTCAACGGCATGGTCTCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: NIHQKVSKITTA*VAKLNGMVSSG
Trigger: TCCTGAGGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTTCTGGTGGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 72 bp CACACGGACACACTGTTGGGCAGAACACATGCTGGCTaGTACAAACATGCCCCAGTTGCACACCCATCAAAG +
Preference number: 3 (lower is better)
Translates to: HTDTLLGRTHAG*YKHAPVAHPSK
Trigger: CTTTGATGGGTGTGCAACTGGGGCATGTTTGTACCAGCCAGCATGTGTTCTGCCCAACAGTGTGTCCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 72 bp GTGGGCAGAGGATGCTGTGCTGAAGGCAATCAATTCTaGACAGCTCACCAAGCAATTGCTGCACCTGCAACA +
Preference number: 3 (lower is better)
Translates to: VGRGCCAEGNQF*TAHQAIAAPAT
Trigger: TGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAGAATTGATTGCCTTCAGCACAGCATCCTCTGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 72 bp CGTAGTCGCAAGTCATGTTGGGGTCGTAATGCCAGGTaGGGAGAATCCCCTTTCCCATCCCAACAACTTGTT +
Preference number: 3 (lower is better)
Translates to: RSRKSCWGRNAR*GESPFPSQQLV
Trigger: AACAAGTTGTTGGGATGGGAAAGGGGATTCTCCTCACCTGGCATTACGACCCCAACATGACTTGCGACTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR-3UTR CAA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTGGTCAGTGTCACACTaGTTTTCAAAGTTTGTACCC +
Preference number: 3 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSWSVSH*FSKFVP
Trigger: GGGTACAAACTTTGAAAACAAGTGTGACACTGACCA...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCAAACATGATTATGATTaGGGCTGGTCAGTGTCACAC +
Preference number: 3 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSKHDYD*GWSVSH
Trigger: GTGTGACACTGACCAGCCCAAATCATAATCATGTTT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGGAACAAGGCAGGAGTaGAGGGCAAGCAGACAATGC +
Preference number: 3 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYGTRQE*RASRQC
Trigger: GCATTGTCTGCTTGCCCTCAACTCCTGCCTTGTTCC...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 72 bp CTTATGAGAAACAAGGGTGGGCAGAGGATGCTGTGCTaGAGGCAATCAATTCTGCACAGCTCACCAAGCAAT +
Preference number: 3 (lower is better)
Translates to: LMRNKGGQRMLC*RQSILHSSPSN
Trigger: ATTGCTTGGTGAGCTGTGCAGAATTGATTGCCTTCAGCACAGCATCCTCTGCCCACCCTTGTTTCTCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 72 bp AGGCAATCAATTCTGCACAGCTCACCAAGCAATTGCTaGACCTGCAACACAGGTATGCCCATGGATTCAGAT +
Preference number: 3 (lower is better)
Translates to: RQSILHSSPSNC*TCNTGMPMDSD
Trigger: ATCTGAATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAGAATTGATTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCAGCAGTAAGAGCTTATaGAGATGGCTGACTGAAGTG +
Preference number: 3 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVSSKSL*RWLTEV
Trigger: CACTTCAGTCAGCCATCTCAATAAGCTCTTACTGCT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCCAGTTGCGGCGGGATTaGTTTTACATGTACGTACAA +
Preference number: 3 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVQLRRD*FYMYVQ
Trigger: TTGTACGTACATGTAAAACAAATCCCGCCGCAACTG...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAGAAGGAAAACTGCTTaGGCCCCAGACATAAATCAC +
Preference number: 3 (lower is better)
Translates to: VASKGEATNLTGQSTISMRRKTA*APDINH
Trigger: GTGATTTATGTCTGGGGCCAAAGCAGTTTTCCTTCT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 72 bp TTTTCCAAGAACCACAATCACTCCAGACATCGCTTATaGGAAACAAGGGTGGGCAGAGGATGCTGTGCTGAA +
Preference number: 3 (lower is better)
Translates to: FSKNHNHSRHRL*ETRVGRGCCAE
Trigger: TTCAGCACAGCATCCTCTGCCCACCCTTGTTTCTCATAAGCGATGTCTGGAGTGATTGTGGTTCTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 72 bp GGATTGATACATTTCAACAGGGAACAAGGCAGGAGTTaGGGGCAAGCAGACAATGCTAACAGCAAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: GLIHFNREQGRS*GQADNANSKLW
Trigger: CCAAAGCTTGCTGTTAGCATTGTCTGCTTGCCCTCAACTCCTGCCTTGTTCCCTGTTGAAATGTATCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 72 bp GACAAACAGCGCACATTTACCAGTATCTCAGACAACTaGACATGTGACCAATCTCCTTCCAACTTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: DKQRTFTSISDN*TCDQSPSNFPP
Trigger: GGGAGGGAAGTTGGAAGGAGATTGGTCACATGTTCAGTTGTCTGAGATACTGGTAAATGTGCGCTGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 72 bp TCAATTCTGCACAGCTCACCAAGCAATTGCTGCACCTaGAACACAGGTATGCCCATGGATTCAGATCAGTTT +
Preference number: 3 (lower is better)
Translates to: SILHSSPSNCCT*NTGMPMDSDQF
Trigger: AAACTGATCTGAATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAGAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 72 bp GGACAGAGCACAATCAGTATGAGACCACCTTGTAAATaGAGGCATGCAACCTTCATTGACAAACAGCGCACA +
Preference number: 3 (lower is better)
Translates to: GQSTISMRPPCK*RHATFIDKQRT
Trigger: TGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCTCATACTGATTGTGCTCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 72 bp ACTGTTGGGCAGAACACATGCTGGCTGGTACAAACATaGCCCAGTTGCACACCCATCAAAGAAGAAGAAATT +
Preference number: 3 (lower is better)
Translates to: TVGQNTCWLVQT*PSCTPIKEEEI
Trigger: AATTTCTTCTTCTTTGATGGGTGTGCAACTGGGGCATGTTTGTACCAGCCAGCATGTGTTCTGCCCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCTGGTCAGTGTCACACTaGTTTTCAAAGTTTGTACCC +
Preference number: 3 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVWSVSH*FSKFVP
Trigger: GGGTACAAACTTTGAAAACAAGTGTGACACTGACCA...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 72 bp GGCATCAATCACATAACACCTACCCCTCCACAACAATaGAAGGTTTCTTTTTCGTGTTGTCTCCCGCTACTC +
Preference number: 3 (lower is better)
Translates to: GINHITPTPPQQ*KVSFSCCLPLL
Trigger: GAGTAGCGGGAGACAACACGAAAAAGAAACCTTTCATTGTTGTGGAGGGGTAGGTGTTATGTGATTGATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATAACTTCACCTGTTACTaGGACATTTTCTCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYNFTCY*DIFSLA
Trigger: GGCCAGGGAGAAAATGTCCAAGTAACAGGTGAAGTT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATCAACTTATAAGGAGCTaGCCCAGACTTAATAGCGTT +
Preference number: 3 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYQLIRS*PRLNSV
Trigger: AACGCTATTAAGTCTGGGCAAGCTCCTTATAAGTTG...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 72 bp GATCAGATAATGTGGCATGATGAAAAGACTCATGAGTaGGAGGAACATCCACCAGAAGGTGTCAAAGATCAC +
Preference number: 3 (lower is better)
Translates to: DQIMWHDEKTHE*EEHPPEGVKDH
Trigger: GTGATCTTTGACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACATTATCTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 72 bp GAGGTTGATACTTCCTCTCTTAAGCTTCTCAGTGAATaGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCA +
Preference number: 3 (lower is better)
Translates to: EVDTSSLKLLSE*LLLFLSCRNKA
Trigger: TGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACTGAGAAGCTTAAGAGAGGAAGTATCAACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACAACTTATAAGGAGCTaGCCCAGACTTAATAGCGTT +
Preference number: 3 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGQLIRS*PRLNSV
Trigger: AACGCTATTAAGTCTGGGCAAGCTCCTTATAAGTTG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp AGGAGAATCCCCTTTCCCATCCCAACAACTTGTTCTATTTTGAGATCATCATTTTCCATACTCGCTATTTaGGAAGGTGGTGATGAGCCC +
Preference number: 3 (lower is better)
Translates to: RRIPFPIPTTCSILRSSFSILAI*EGGDEP
Trigger: GGGCTCATCACCACCTTCCAAAATAGCGAGTATGGA...AAATGATGATCTCAAAATAGAACAAGTTGTTGGGATGGGAAAGGGGATTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR TCA 72 bp GCAACACAGGTATGCCCATGGATTCAGATCAGTTTATaGCAGTTACTAAGAAACAGCCCTTGGGTAACTGTT +
Preference number: 3 (lower is better)
Translates to: ATQVCPWIQISL*QLLRNSPWVTV
Trigger: AACAGTTACCCAAGGGCTGTTTCTTAGTAACTGTCATAAACTGATCTGAATCCATGGGCATACCTGTGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 72 bp TCTCCTCAGGAGGAACGAAATCCAATCAGAACTATATaGACAGCTAACGCTGCTAGATATTGCTTAGTAGTC +
Preference number: 3 (lower is better)
Translates to: SPQEERNPIRTI*TANAARYCLVV
Trigger: GACTACTAAGCAATATCTAGCAGCGTTAGCTGTCCATATAGTTCTGATTGGATTTCGTTCCTCCTGAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTCTTGAGTTTTGTGGATaGAGGATTCTGAGTCACTAT +
Preference number: 3 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFLEFCG*RILSHY
Trigger: ATAGTGACTCAGAATCCTCAATCCACAAAACTCAAG...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACTTGAGTTTTGTGGATaGAGGATTCTGAGTCACTAT +
Preference number: 3 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGLEFCG*RILSHY
Trigger: ATAGTGACTCAGAATCCTCAATCCACAAAACTCAAG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATTCCAGATGGTCACAGTaGAAATGCATATATATTGAC +
Preference number: 3 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYSRWSQ*KCIYID
Trigger: GTCAATATATATGCATTTCAACTGTGACCATCTGGA...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 72 bp AGGTTAGAAAGGGCCCTGGATCCAGATGGTCACAGTTaGAATGCATATATATTGACAGACAGAGATCAAACA +
Preference number: 3 (lower is better)
Translates to: RLERALDPDGHS*NAYILTDRDQT
Trigger: TGTTTGATCTCTGTCTGTCAATATATATGCATTTCAACTGTGACCATCTGGATCCAGGGCCCTTTCTAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAGGCATGCAACCTTCATaGACAAACAGCGCACATTTA +
Preference number: 3 (lower is better)
Translates to: IQILRATISNLGLYKFNKGMQPS*TNSAHL
Trigger: TAAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCC...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp TCTGCAGAAGTATCCTCAACAGTAAAATTTGGTGCAACAATGGGAGCCAATTCTTCCCATCCCAACAACTaGTTCTATTTTGAGATCATC +
Preference number: 3 (lower is better)
Translates to: SAEVSSTVKFGATMGANSSHPNN*FYFEII
Trigger: GATGATCTCAAAATAGAACAAGTTGTTGGGATGGGA...AGAATTGGCTCCCATTGTTGCACCAAATTTTACTGTTGAGGATACTTCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR TCA 72 bp GAATTCTTTGGCTTGATCACAAAGAGCTCCCAATCTTaGGTTTTGTGGATTGAGGATTCTGAGTCACTATAC +
Preference number: 3 (lower is better)
Translates to: EFFGLITKSSQS*VLWIEDSESLY
Trigger: GTATAGTGACTCAGAATCCTCAATCCACAAAACTCAAGATTGGGAGCTCTTTGTGATCAAGCCAAAGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 72 bp AAACTCATCAGATTCTATTACAGTTTCAGTGCTGTTTaGGGGAACTTTTCTCCAGTCCATAAGGCATGGTTC +
Preference number: 3 (lower is better)
Translates to: KLIRFYYSFSAV*GNFSPVHKAWF
Trigger: GAACCATGCCTTATGGACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCTGATGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR CCA 72 bp ACCCTTCAGGAAAATTCTGTTGAATCTGTGACACTCTaGGATAGGACTCAGTCAAGAAAATTAGTTACTGAG +
Preference number: 3 (lower is better)
Translates to: TLQENSVESVTL*DRTQSRKLVTE
Trigger: CTCAGTAACTAATTTTCTTGACTGAGTCCTATCCCAGAGTGTCACAGATTCAACAGAATTTTCCTGAAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATAAACATGATTATGATTaGGGCTGGTCAGTGTCACAC +
Preference number: 3 (lower is better)
Translates to: AARYCLVVISHSKSLELHKHDYD*GWSVSH
Trigger: GTGTGACACTGACCAGCCCAAATCATAATCATGTTT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR-3UTR CAA 90 bp CAATCATGGAGCGTAATAATTGATATCCTTGATTTCTGCATCCATACAGGAAAACAGTTTCAGTGCTGTTaGAGGGAACTTTTCTCCAGT +
Preference number: 3 (lower is better)
Translates to: QSWSVIIDILDFCIHTGKQFQCC*RELFSS
Trigger: ACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTG...TTTTCCTGTATGGATGCAGAAATCAAGGATATCAATTATTACGCTCCATGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR TCA 72 bp ATAATGATCTCCATTCCTCGCAAGGGAAGCTTGATTTaGAACTGGCTTGTAAGTGAATTGACTTGTAAGAGA +
Preference number: 3 (lower is better)
Translates to: IMISIPRKGSLI*NWLVSELTCKR
Trigger: TCTCTTACAAGTCAATTCACTTACAAGCCAGTTTCAAATCAAGCTTCCCTTGCGAGGAATGGAGATCATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR TCA 72 bp TTATGGAGAAATAAGATATCTAGTGATATACAGGCATaGGTCCTTCCTCAGTTTTCACTCAAACCGTGGAGT +
Preference number: 3 (lower is better)
Translates to: LWRNKISSDIQA*VLPQFSLKPWS
Trigger: ACTCCACGGTTTGAGTGAAAACTGAGGAAGGACTCATGCCTGTATATCACTAGATATCTTATTTCTCCATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 72 bp ATCAGAACTATATGGACAGCTAACGCTGCTAGATATTaGTTAGTAGTCATCTCACATAGTAAGTCACTGGAA +
Preference number: 3 (lower is better)
Translates to: IRTIWTANAARY*LVVISHSKSLE
Trigger: TTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGCGTTAGCTGTCCATATAGTTCTGAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR GCA 72 bp CGAATCTGCAGAAGTATCCTCAACAGTAAAATTTGGTaGAACAATGGGAGCCAATTCTTCTATATATCCAAT +
Preference number: 3 (lower is better)
Translates to: RICRSILNSKIW*NNGSQFFYISN
Trigger: ATTGGATATATAGAAGAATTGGCTCCCATTGTTGCACCAAATTTTACTGTTGAGGATACTTCTGCAGATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR CCA 72 bp AAATGCTTCTTGAAGGTAGAGTACATGAGAATTCTTTaGCTTGATCACAAAGAGCTCCCAATCTTGAGTTTT +
Preference number: 3 (lower is better)
Translates to: KCFLKVEYMRIL*LDHKELPILSF
Trigger: AAAACTCAAGATTGGGAGCTCTTTGTGATCAAGCCAAAGAATTCTCATGTACTCTACCTTCAAGAAGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CCA 72 bp ACTTCTCAGGTAAACAATAATGACTTAATGGACAGATaGATGTTACACCAATGGCACAGCAATGTACTCAAA +
Preference number: 3 (lower is better)
Translates to: TSQVNNNDLMDR*MLHQWHSNVLK
Trigger: TTTGAGTACATTGCTGTGCCATTGGTGTAACATCCATCTGTCCATTAAGTCATTATTGTTTACCTGAGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453190.7
3UTR CCA 72 bp TATCGAATCTGCAGAAGTATCCTCAACAGTAAAATTTaGTGCAACAATGGGAGCCAATTCTTCTATATATCC +
Preference number: 3 (lower is better)
Translates to: YRICRSILNSKI*CNNGSQFFYIS
Trigger: GGATATATAGAAGAATTGGCTCCCATTGTTGCACCAAATTTTACTGTTGAGGATACTTCTGCAGATTCGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506003.5
3UTR CCA 72 bp CAACAATGGGAGCCAATTCTTCTATATATCCAATCATaGAGCGTAATAATTGATATCCTTGATTTCTGCATC +
Preference number: 3 (lower is better)
Translates to: QQWEPILLYIQS*SVIIDILDFCI
Trigger: GATGCAGAAATCAAGGATATCAATTATTACGCTCCATGATTGGATATATAGAAGAATTGGCTCCCATTGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCCGGCGCGAGGCTGCTTaGGGCGGCCACGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVRREAA*GGHGRR
Trigger: CCTTCGCCCGTGGCCGCCTCAAGCAGCCTCGCGCCG...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS-3UTR TCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATAGTCCTGGAGGGCGATaGATGAGTCGCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDSPGGR*MSRRGS
Trigger: GGAGCCTCTGCGACTCATTCATCGCCCTCCAGGACT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263409.8
CDS-3UTR GCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCCTGTGGCTTATAGCCTaGCCCTCCTACAGGGTCATT +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSLWLIA*PSYRVI
Trigger: AATGACCCTGTAGGAGGGGCAGGCTATAAGCCACAG...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCCCGCGCCGCTATCTTaGCATCCCCTGCCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYPAPLS*HPLPPA
Trigger: AGCCGGCGGCAGGGGATGGCAAGATAGCGGCGCGGG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCCAATGCAGTCAGTCCTaGAGGGCGATGAATGAGTCG +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSQCSQS*RAMNES
Trigger: CGACTCATTCATCGCCCTCCAGGACTGACTGCATTG...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263409.8
CDS-3UTR GCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAAGGGCCCGGTGCCTTaGAGCAGAGACACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMKGPVP*SRDTFW
Trigger: CCAGAACGTGTCTCTGCTGCAAGGCACCGGGCCCTT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263409.8
CDS-3UTR GCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATTGGCTGGTACAAACATaGCCCAGTTGCACACCCATC +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDWLVQT*PSCTPI
Trigger: GATGGGTGTGCAACTGGGGCATGTTTGTACCAGCCA...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATCCATCATCTGTGCAATaGAGTCAGTCGGTACGCTCC +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDPSSVQ*SQSVRS
Trigger: GGAGCGTACCGACTGACTGCATTGCACAGATGATGG...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCCTGGAGGGCGATGAATaGGTCGCAGAGGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVLEGDE*VAEAPF
Trigger: AAAGGGAGCCTCTGCGACTCATTCATCGCCCTCCAG...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263409.8
CDS-3UTR TCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATATTGAGATGGCTGACTaGAGTGACACGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDIEMAD*SDTVTL
Trigger: CAGTGTCACCGTGTCACTTCAGTCAGCCATCTCAAT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATTCCAGACATCGCTTATaGGAAACAAGGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDSRHRL*ETRVGR
Trigger: TCTGCCCACCCTTGTTTCTCATAAGCGATGTCTGGA...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATGTGTCGGCGCGAGGCTaGTTGAGGCGGCCACGGGCG +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHVSARG*LRRPRA
Trigger: CGCCCGTGGCCGCCTCAAGCAGCCTCGCGCCGACAC...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATTATCTTGCCATCCCCTaGCGCCGGCTCTGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYYLAIP*RRLCSL
Trigger: GAGGCTACAGAGCCGGCGGCAGGGGATGGCAAGATA...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGGTAGCTTGTAGCACGTaGGCCCACCAACGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMVACST*AHQRCH
Trigger: GTGACAGCGTTGGTGGGCCCACGTGCTACAAGCTAC...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCAGAACACATGCTGGCTaGTACAAACATGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSRTHAG*YKHAPV
Trigger: AACTGGGGCATGTTTGTACCAGCCAGCATGTGTTCT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCATCAAGTCGTATCTCTaGTTTGTGCTGAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSIKSYL*FVLRIR
Trigger: CCTGATCCTCAGCACAAAGCAGAGATACGACTTGAT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATGACAGCCACTGCCACTaGGATGAGAATGGCAATAAT +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDDSHCH*DENGNN
Trigger: ATTATTGCCATTCTCATCCCAGTGGCAGTGGCTGTC...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTTCCTCAATGATGGGTaGACAATAGGACACAACCAC +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSFLNDG*TIGHNH
Trigger: GTGGTTGTGTCCTATTGTCCACCCATCATTGAGGAA...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAGGGGAGGTGCATCTGTaGCTTATAGCCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGGEVHL*LIACPS
Trigger: GGAGGGGCAGGCTATAAGCCACAGATGCACCTCCCC...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCAAGAGCTTATTGAGATaGCTGACTGAAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSKSLLR*LTEVTR
Trigger: CCGTGTCACTTCAGTCAGCCATCTCAATAAGCTCTT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTGGACATTTTCTCCCTaGCCTGCAAATCCACTTACA +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSWTFSP*PANPLT
Trigger: TGTAAGTGGATTTGCAGGCCAGGGAGAAAATGTCCA...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCAAGATCACCACTGCCTaGGTAGCCAAGCTCAACGGC +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVKITTA*VAKLNG
Trigger: GCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATAGAACACATGCTGGCTaGTACAAACATGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDRTHAG*YKHAPV
Trigger: AACTGGGGCATGTTTGTACCAGCCAGCATGTGTTCT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGCGGTGTGGAAAAACTaGACCCCTGTCGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVAVWKN*TPVVPL
Trigger: AAGTGGAACGACAGGGGTTCAGTTTTTCCACACCGC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGTTCCAAGGGCATATCTaGGGCCCAACTCCAGTGATG +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMFQGHI*GPTPVM
Trigger: CATCACTGGAGTTGGGCCTCAGATATGCCCTTGGAA...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATGGTCGTAATGCCAGGTaGGGAGAATCCCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYGRNAR*GESPFP
Trigger: TGGGAAAGGGGATTCTCCTCACCTGGCATTACGACC...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATATTCTGTTGAATCTGTaGCACTCTGGGATAGGACTC +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDILLNL*HSGIGL
Trigger: GAGTCCTATCCCAGAGTGTCACAGATTCAACAGAAT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGCCCTCCAGCTTCATCTaGGGCTGGGTTTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMPSSFI*GWVWYF
Trigger: GAAATACCAAACCCAGCCGCAGATGAAGCTGGAGGG...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATGTCCACCATCCAGGATaGTCGTTTCAAACATACGTA +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDVHHPG*SFQTYV
Trigger: TACGTATGTTTGAAACGACCATCCTGGATGGTGGAC...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCCACTTATCCTTGTCCTaGAGAGATAAAGTACGGGAT +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSHLSLS*RDKVRD
Trigger: ATCCCGTACTTTATCTCTCCAGGACAAGGATAAGTG...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCACACAAGCTAGATTTTaGTGTGTATCACCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSTQARF*CVSPFR
Trigger: CCTGAAGGGTGATACACACCAAAATCTAGCTTGTGT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTTTTCACTCAAACCGTaGAGTCACTTCCGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSFSLKP*SHFRSR
Trigger: TCTACTTCGGAAGTGACTCCACGGTTTGAGTGAAAA...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATGGGCAGAACACATGCTaGCTGGTACAAACATGCCCC +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYGQNTC*LVQTCP
Trigger: GGGGCATGTTTGTACCAGCCAGCATGTGTTCTGCCC...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGGTCGTAATGCCAGGTaGGGAGAATCCCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFGRNAR*GESPFP
Trigger: TGGGAAAGGGGATTCTCCTCACCTGGCATTACGACC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATAGAGCACAATCAGTATaGGACCACCTTGTAAATGCA +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDRAQSV*DHLVNA
Trigger: TGCATTTACAAGGTGGTCTCATACTGATTGTGCTCT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTCCCACATTTTACTCTaGGATGCCCAATTTTACACT +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSSHILL*DAQFYT
Trigger: AGTGTAAAATTGGGCATCTCAGAGTAAAATGTGGGA...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGGCCTGTTCCAGAGGGTaGTTTCCAAGAACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMACSRG*FPRTVP
Trigger: TGGAACTGTTCTTGGAAAGCACCCTCTGGAACAGGC...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTTCTTCTTCTGGTTTTaGTTGAGGCTGATACATCGA +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSFFFWF*LRLIHR
Trigger: TCGATGTATCAGCCTCAAGCAAAACCAGAAGAAGAA...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCAGAACAGAAAACAGTTaGGGCGGGATTTGTTTTACA +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSRTENS*GGICFT
Trigger: TGTAAAACAAATCCCGCCGCAACTGTTTTCTGTTCT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGTCAAAGATCACCACTaGCTGGGTAGCCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVVKDHH*LGSQAQ
Trigger: TTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGAC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCAGCAATTGCTGCACCTaGAACACAGGTATGCCCATG +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVSNCCT*NTGMPM
Trigger: CATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGTAGCTTGTAGCACGTaGGCCCACCAACGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPVACST*AHQRCH
Trigger: GTGACAGCGTTGGTGGGCCCACGTGCTACAAGCTAC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp TTCCGACCGAGACGAGTTACACCACTTAATGACGTAGTCGCAAGTCATGTTGGGCCATACTCGCTATTTTaGAAGGTGGTGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FRPRRVTPLNDVVASHVGPYSLF*KVVMSP
Trigger: TGGGCTCATCACCACCTTCCAAAATAGCGAGTATGG...CCCAACATGACTTGCGACTACGTCATTAAGTGGTGTAACTCGTCTCGGTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATATCTGCGGCTGGGTTTaGTATTTCTTCCTCAATGAT +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDICGWV*YFFLND
Trigger: ATCATTGAGGAAGAAATACCAAACCCAGCCGCAGAT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCGATTATGATTTGGGCTaGTCAGTGTCACACTTGTTT +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSDYDLG*SVSHLF
Trigger: AAACAAGTGTGACACTGACCAGCCCAAATCATAATC...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGACACACTTCAAATCATaGGGAGCCCCCTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMTHFKS*GAPFFW
Trigger: CCAGAAAAAGGGGGCTCCTCATGATTTGAAGTGTGT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTTTCCAAGGGCATATCTaGGGCCCAACTCCAGTGATG +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFFQGHI*GPTPVM
Trigger: CATCACTGGAGTTGGGCCTCAGATATGCCCTTGGAA...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATATCCTTCACTTTGAATaGAGTAGGAGTATGGGGATA +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDILHFE*SRSMGI
Trigger: TATCCCCATACTCCTACTTCATTCAAAGTGAAGGAT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAAGAATGCCCAGTGCTaGTGTAGCAACACTAGCAGT +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMKNAQC*CSNTSS
Trigger: ACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATCAGAGGATGCTGTGCTaGAGGCAATCAATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYQRMLC*RQSILH
Trigger: GTGCAGAATTGATTGCCTTCAGCACAGCATCCTCTG...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGAACAAGGCAGGAGTTaGGGGCAAGCAGACAATGCT +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFEQGRS*GQADNA
Trigger: AGCATTGTCTGCTTGCCCTCAACTCCTGCCTTGTTC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCGTAGATTTGAATCTTTaGGTCAATAGTCTCAGATCC +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSVDLNL*VNSLRS
Trigger: GGATCTGAGACTATTGACTCAAAGATTCAAATCTAC...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAGCGAAAGGGCCCGGTaGCTTGCAGCAGAGACACGT +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKSERAR*LAAETR
Trigger: ACGTGTCTCTGCTGCAAGGCACCGGGCCCTTTCGCT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263409.8
CDS-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGCCTGTTCCAGAGGGTaGTTTCCAAGAACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYACSRG*FPRTVP
Trigger: TGGAACTGTTCTTGGAAAGCACCCTCTGGAACAGGC...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp TTCCGACCGAGACGAGTTACACCACTTAATGACGTAGTCGCAAGTCATGTTGGGATCAAGTCGTATCTCTaGTTTGTGCTGAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: FRPRRVTPLNDVVASHVGIKSYL*FVLRIR
Trigger: CCTGATCCTCAGCACAAAGCAGAGATACGACTTGAT...CCCAACATGACTTGCGACTACGTCATTAAGTGGTGTAACTCGTCTCGGTCGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATTTCAGAGTTGTGTTGTaGGTCACTAATTTTACGAGC +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDFRVVL*VTNFTS
Trigger: GCTCGTAAAATTAGTGACCCACAACACAACTCTGAA...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACCAGTCCATAAGGCATaGTTCCGACCGAGACGAGTT +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGPVHKA*FRPRRV
Trigger: AACTCGTCTCGGTCGGAACCATGCCTTATGGACTGG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATCTCAACAGTAAAATTTaGTGCAACAATGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDLNSKI*CNNGSQ
Trigger: TTGGCTCCCATTGTTGCACCAAATTTTACTGTTGAG...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATAAGATCACCACTGCCTaGGTAGCCAAGCTCAACGGC +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYKITTA*VAKLNG
Trigger: GCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATTATGAGAAACAAGGGTaGGCAGAGGATGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYYEKQG*AEDAVL
Trigger: CAGCACAGCATCCTCTGCCCACCCTTGTTTCTCATA...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATTTTCTAACCAATGACTaGGCTTTCACTGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDFLTND*AFTEEK
Trigger: CTTTTCCTCAGTGAAAGCCCAGTCATTGGTTAGAAA...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGGGCAGAACACATGCTaGCTGGTACAAACATGCCCC +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYGQNTC*LVQTCP
Trigger: GGGGCATGTTTGTACCAGCCAGCATGTGTTCTGCCC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATAAGGACCTTGACTTATaGCCAGCTAATGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDKDLDL*PANERE
Trigger: TTCTCTTTCATTAGCTGGCCATAAGTCAAGGTCCTT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAATTGAGATGGCTGACTaGAGTGACACGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGIEMAD*SDTVTL
Trigger: CAGTGTCACCGTGTCACTTCAGTCAGCCATCTCAAT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCATTCTGTTGAATCTGTaGCACTCTGGGATAGGACTC +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVILLNL*HSGIGL
Trigger: GAGTCCTATCCCAGAGTGTCACAGATTCAACAGAAT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGATCAAGTCGTATCTCTaGTTTGTGCTGAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMIKSYL*FVLRIR
Trigger: CCTGATCCTCAGCACAAAGCAGAGATACGACTTGAT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATATGGTTTTCAGGCTCTaGATCAGAGCGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYMVFRL*IRAIFR
Trigger: CCTGAAGATCGCTCTGATGCAGAGCCTGAAAACCAT...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCTGTGGCTTATAGCCTaGCCCTCCTACAGGGTCATT +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYLWLIA*PSYRVI
Trigger: AATGACCCTGTAGGAGGGGCAGGCTATAAGCCACAG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGTCAAAGATCACCACTaGCTGGGTAGCCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFVKDHH*LGSQAQ
Trigger: TTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGAC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAAGCAATTGCTGCACCTaGAACACAGGTATGCCCATG +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGSNCCT*NTGMPM
Trigger: CATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATTCACCAAGCAATTGCTaGACCTGCAACACAGGTATG +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYSPSNC*TCNTGM
Trigger: CATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGA...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATTCACCAAGCAATTGCTaGACCTGCAACACAGGTATG +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYSPSNC*TCNTGM
Trigger: CATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGA...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTGGTCACAGTTGAAATaGATATATATTGACAGACAG +
Preference number: 4 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSWSQLK*IYIDRQ
Trigger: CTGTCTGTCAATATATATGCATTTCAACTGTGACCA...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATTGGCTGGTACAAACATaGCCCAGTTGCACACCCATC +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYWLVQT*PSCTPI
Trigger: GATGGGTGTGCAACTGGGGCATGTTTGTACCAGCCA...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATCCATACTCGCTATTTTaGAAGGTGGTGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYPYSLF*KVVMSP
Trigger: TGGGCTCATCACCACCTTCCAAAATAGCGAGTATGG...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTCCAGTCCATAAGGCATaGTTCCGACCGAGACGAGTT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPPVHKA*FRPRRV
Trigger: AACTCGTCTCGGTCGGAACCATGCCTTATGGACTGG...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGATATGAGAAACAAGGGTaGGCAGAGGATGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGYEKQG*AEDAVL
Trigger: CAGCACAGCATCCTCTGCCCACCCTTGTTTCTCATA...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATACACGGACACACTGTTaGGCAGAACACATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYTRTHC*AEHMLA
Trigger: AGCCAGCATGTGTTCTGCCCAACAGTGTGTCCGTGT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCAAAAAGGGAACAGTTTaGGATCCGCAGTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVKKGTV*DPQFLP
Trigger: AGGGAGAAACTGCGGATCCCAAACTGTTCCCTTTTT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGCAGCCACTGGAAATTTaGAGCAGTCCTCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMQPLEI*SSPHSF
Trigger: AAAAGAATGAGGACTGCTTCAAATTTCCAGTGGCTG...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGCGACCCAGCGGATTGTaGGCATTCAAAGTAAAATTA +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMRPSGL*AFKVKL
Trigger: TAATTTTACTTTGAATGCTCACAATCCGCTGGGTCG...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GTCGAAACTCATCAGATTCTATTACAGTTTCAGTGCTGTTTGAGGGAACTTTTCGGTCGTAATGCCAGGTaGGGAGAATCCCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VETHQILLQFQCCLRELFGRNAR*GESPFP
Trigger: TGGGAAAGGGGATTCTCCTCACCTGGCATTACGACC...GAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCTGATGAGTTTCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR TCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATGCATGGACTTCCAAATaGGACAATCTCACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYAWTSK*DNLTVA
Trigger: AGCAACAGTGAGATTGTCTCATTTGGAAGTCCATGC...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGAGAATTCTTTGGCTTaGTCACAAAGAGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVENSLA*SQRAPN
Trigger: ATTGGGAGCTCTTTGTGATCAAGCCAAAGAATTCTC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGCAAAGTTTGTACCCCTaGGACAACTGTTTGATAACC +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMQSLYP*DNCLIT
Trigger: GGTTATCAAACAGTTGTCTCAGGGGTACAAACTTTG...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATTCCAGACATCGCTTATaGGAAACAAGGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYSRHRL*ETRVGR
Trigger: TCTGCCCACCCTTGTTTCTCATAAGCGATGTCTGGA...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAGAGCACAATCAGTATaGGACCACCTTGTAAATGCA +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMRAQSV*DHLVNA
Trigger: TGCATTTACAAGGTGGTCTCATACTGATTGTGCTCT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCAATATCCATCATCTGTaGAATGCAGTCAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVNIHHL*NAVSPG
Trigger: TCCAGGACTGACTGCATTGCACAGATGATGGATATT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263409.8
CDS-3UTR GCA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATATTACGAATCTTGATTaGAACATTTTCCCCATCAAG +
Preference number: 4 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDITNLD*NIFPIK
Trigger: CTTGATGGGGAAAATGTTGCAATCAAGATTCGTAAT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTATGGTTTTCAGGCTCTaGATCAGAGCGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFMVFRL*IRAIFR
Trigger: CCTGAAGATCGCTCTGATGCAGAGCCTGAAAACCAT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCATTTTCTCCCTGGCCTaGAAATCCACTTACAATTCC +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVIFSLA*KSTYNS
Trigger: GGAATTGTAAGTGGATTTGCAGGCCAGGGAGAAAAT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGATTTTCTCCCTGGCCTaGAAATCCACTTACAATTCC +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMIFSLA*KSTYNS
Trigger: GGAATTGTAAGTGGATTTGCAGGCCAGGGAGAAAAT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACCTGCAACACAGGTATaGCCATGGATTCAGATCAGT +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGPATQV*PWIQIS
Trigger: ACTGATCTGAATCCATGGGCATACCTGTGTTGCAGG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGTTGGGCAGAACACATaGTGGCTGGTACAAACATGC +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPVGQNT*WLVQTC
Trigger: GCATGTTTGTACCAGCCAGCATGTGTTCTGCCCAAC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp TCTGCAGAAGTATCCTCAACAGTAAAATTTGGTGCAACAATGGGAGCCAATTCTCCAGTCCATAAGGCATaGTTCCGACCGAGACGAGTT +
Preference number: 4 (lower is better)
Translates to: SAEVSSTVKFGATMGANSPVHKA*FRPRRV
Trigger: AACTCGTCTCGGTCGGAACCATGCCTTATGGACTGG...AGAATTGGCTCCCATTGTTGCACCAAATTTTACTGTTGAGGATACTTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATTTCCTCAATGATGGGTaGACAATAGGACACAACCAC +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYFLNDG*TIGHNH
Trigger: GTGGTTGTGTCCTATTGTCCACCCATCATTGAGGAA...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATTCCATGTATTTACATTaGCCTGAGGTCTGTAACCCG +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYSMYLH*PEVCNP
Trigger: CGGGTTACAGACCTCAGGCCAATGTAAATACATGGA...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATTGGACATTTTCTCCCTaGCCTGCAAATCCACTTACA +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYWTFSP*PANPLT
Trigger: TGTAAGTGGATTTGCAGGCCAGGGAGAAAATGTCCA...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCCCAATCAGAACTATATaGACAGCTAACGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVPIRTI*TANAAR
Trigger: TCTAGCAGCGTTAGCTGTCCATATAGTTCTGATTGG...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAAAAGACTCATGAGTaGGAGGAACATCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYEKTHE*EEHPPE
Trigger: TTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTC...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAGGCCCTGGATCCAGATaGTCACAGTTGAAATGCATA +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGGPGSR*SQLKCI
Trigger: TATGCATTTCAACTGTGACCATCTGGATCCAGGGCC...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAAGCTTCTCAGTGAATaGCTGCTTCTGTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMKLLSE*LLLFLS
Trigger: GCTTAGAAACAGAAGCAGCCATTCACTGAGAAGCTT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATGAATCTGTGACACTCTaGGATAGGACTCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYESVTL*DRTQSR
Trigger: TCTTGACTGAGTCCTATCCCAGAGTGTCACAGATTC...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 72 bp GCAGAACACATGCTGGCTGGTACAAACATGCCCCAGTaGCACACCCATCAAAGAAGAAGAAATTATGAACAC +
Preference number: 4 (lower is better)
Translates to: AEHMLAGTNMPQ*HTHQRRRNYEH
Trigger: GTGTTCATAATTTCTTCTTCTTTGATGGGTGTGCAACTGGGGCATGTTTGTACCAGCCAGCATGTGTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTAGTTTCAGTGCTGTTTaGGGGAACTTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFSFSAV*GNFSPV
Trigger: GACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTAAGAATGCCCAGTGCTaGTGTAGCAACACTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPKNAQC*CSNTSS
Trigger: ACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATGAGAATTCTTTGGCTTaGTCACAAAGAGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYENSLA*SQRAPN
Trigger: ATTGGGAGCTCTTTGTGATCAAGCCAAAGAATTCTC...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCCACCAAGTATACACATaGGAAAACCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVHQVYT*ENHKQQ
Trigger: CTGTTGTTTGTGGTTTTCTCATGTGTATACTTGGTG...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATCAAAGTTTGTACCCCTaGGACAACTGTTTGATAACC +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYQSLYP*DNCLIT
Trigger: GGTTATCAAACAGTTGTCTCAGGGGTACAAACTTTG...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCATTAGGGCAACCAACTaGAATAATGGAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVIRATN*NNGSKH
Trigger: ATGCTTGCTTCCATTATTTCAGTTGGTTGCCCTAAT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGATTAGGGCAACCAACTaGAATAATGGAAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMIRATN*NNGSKH
Trigger: ATGCTTGCTTCCATTATTTCAGTTGGTTGCCCTAAT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAGAACAAGGCAGGAGTTaGGGGCAAGCAGACAATGCT +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKEQGRS*GQADNA
Trigger: AGCATTGTCTGCTTGCCCTCAACTCCTGCCTTGTTC...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGATAAAGTACGGGATTaGTACATTTCAACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVDKVRD*YISTGN
Trigger: GTTCCCTGTTGAAATGTATCAATCCCGTACTTTATC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATAGACAACTGAACATGTaGCCAATCTCCTTCCAACTT +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYRQLNM*PISFQL
Trigger: AAGTTGGAAGGAGATTGGTCACATGTTCAGTTGTCT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATACCCCTCCACAACAATaGAAGGTTTCTTTTTCGTGT +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYTPPQQ*KVSFSC
Trigger: ACACGAAAAAGAAACCTTTCATTGTTGTGGAGGGGT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATATCCATAGCGCTATGTaGTTGCTTTACAACCACTGT +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYIHSAM*LLYNHC
Trigger: ACAGTGGTTGTAAAGCAATCACATAGCGCTATGGAT...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATCTTCTGTTTCTAAGCTaGAGGAACAAAGCACCTCTA +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYLLFLS*RNKAPL
Trigger: TAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAG...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATCTTCTGTTTCTAAGCTaGAGGAACAAAGCACCTCTA +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYLLFLS*RNKAPL
Trigger: TAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAG...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTAAGGGGCAGTTTGTATaGCCAATCAGTGCTGATAAC +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFKGQFV*PISADN
Trigger: GTTATCAGCACTGATTGGCCATACAAACTGCCCCTT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATCGCTGTCACCCTTCCTaGATTCCAACTACATATAAT +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYRCHPS*IPTTYN
Trigger: ATTATATGTAGTTGGAATCCAGGAAGGGTGACAGCG...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATGCCCCTTTGAAGGACTaGCTTCTGTTGTTAAATGTT +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYAPLKD*LLLLNV
Trigger: AACATTTAACAACAGAAGCCAGTCCTTCAAAGGGGC...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTCCATACTCGCTATTTTaGAAGGTGGTGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPPYSLF*KVVMSP
Trigger: TGGGCTCATCACCACCTTCCAAAATAGCGAGTATGG...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTAAGAGCTTATTGAGATaGCTGACTGAAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFKSLLR*LTEVTR
Trigger: CCGTGTCACTTCAGTCAGCCATCTCAATAAGCTCTT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATCTAAGAAACAGCCCTTaGGTAACTGTTCCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYLRNSP*VTVPVR
Trigger: TCTTACAGGAACAGTTACCCAAGGGCTGTTTCTTAG...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGTTTCTAACCAATGACTaGGCTTTCACTGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMFLTND*AFTEEK
Trigger: CTTTTCCTCAGTGAAAGCCCAGTCATTGGTTAGAAA...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAACACGGACACACTGTTaGGCAGAACACATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKTRTHC*AEHMLA
Trigger: AGCCAGCATGTGTTCTGCCCAACAGTGTGTCCGTGT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCTTGGGGAAAAGCATTTaGAATCAAACTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVLGKSI*NQTGRR
Trigger: TCTTCTCCCAGTTTGATTCCAAATGCTTTTCCCCAA...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAAAAAAGGGAACAGTTTaGGATCCGCAGTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGKKGTV*DPQFLP
Trigger: AGGGAGAAACTGCGGATCCCAAACTGTTCCCTTTTT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 72 bp CGAGCGGTGAAAGTAATGCTGGTTTGGAAAATGAGGTaGATACTTCCTCTCTTAAGCTTCTCAGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: RAVKVMLVWKMR*ILPLLSFSVNG
Trigger: GCCATTCACTGAGAAGCTTAAGAGAGGAAGTATCAACCTCATTTTCCAAACCAGCATTACTTTCACCGCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATTCACAATTCAGTTGTTaGGGAGTATCTGGTGGATAT +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYSQFSC*GVSGGY
Trigger: ATATCCACCAGATACTCCTCAACAACTGAATTGTGA...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATATCCTTCACTTTGAATaGAGTAGGAGTATGGGGATA +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYILHFE*SRSMGI
Trigger: TATCCCCATACTCCTACTTCATTCAAAGTGAAGGAT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATTATTTTAGGAAATGCTaGTCGAGTTTCCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYYFRKC*SSFQNL
Trigger: GAGGTTCTGGAAACTCGATCAGCATTTCCTAAAATA...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGCATGGACTTCCAAATaGGACAATCTCACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPAWTSK*DNLTVA
Trigger: AGCAACAGTGAGATTGTCTCATTTGGAAGTCCATGC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAAGTATCTCAGACAACTaGACATGTGACCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGSISDN*TCDQSP
Trigger: AGGAGATTGGTCACATGTTCAGTTGTCTGAGATACT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCAAGAAAATTAGTTACTaGGCTTTCACGATGTGCCTA +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVKKISY*AFTMCL
Trigger: TAGGCACATCGTGAAAGCTCAGTAACTAATTTTCTT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGTAGATTTGAATCTTTaGGTCAATAGTCTCAGATCC +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVVDLNL*VNSLRS
Trigger: GGATCTGAGACTATTGACTCAAAGATTCAAATCTAC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAAGTGATATACAGGCATaGGTCCTTCCTCAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGSDIQA*VLPQFS
Trigger: TGAAAACTGAGGAAGGACTCATGCCTGTATATCACT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGAACAGTTCCACACTTaGAAATTGTTAGTTACACAC +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVEQFHT*KLLVTH
Trigger: GTGTGTAACTAACAATTTGCAAGTGTGGAACTGTTC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGGGGACCTGTTTTCAATaGAAACTTCATAATCAGTAC +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMGTCFQ*KLHNQY
Trigger: GTACTGATTATGAAGTTTGCATTGAAAACAGGTCCC...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTAATGTAAATAACCTGTaGAGTCCCTCCAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFNVNNL*SPSSFI
Trigger: GATGAAGCTGGAGGGACTGCACAGGTTATTTACATT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATAGAACAGAAAACAGTTaGGGCGGGATTTGTTTTACA +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYRTENS*GGICFT
Trigger: TGTAAAACAAATCCCGCCGCAACTGTTTTCTGTTCT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCAACGCTGCTAGATATTaGTTAGTAGTCATCTCACAT +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVNAARY*LVVISH
Trigger: ATGTGAGATGACTACTAAGCAATATCTAGCAGCGTT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGTTGATAACAGCCACTaGAAATTTGAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFVDNSH*KFEAVL
Trigger: GAGGACTGCTTCAAATTTCCAGTGGCTGTTATCAAC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATTTCAGAGTTGTGTTGTaGGTCACTAATTTTACGAGC +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYFRVVL*VTNFTS
Trigger: GCTCGTAAAATTAGTGACCCACAACACAACTCTGAA...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCTTTCCACAAAATGAATaGCACATTCCAAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVFPQNE*HIPRAY
Trigger: ATATGCCCTTGGAATGTGCCATTCATTTTGTGGAAA...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCTTGTTGAGGAGTATCTaGTGGATATCCAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVLLRSI*WISSKN
Trigger: ATTTTTGCTGGATATCCACCAGATACTCCTCAACAA...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACGCTGTCACCCTTCCTaGATTCCAACTACATATAAT +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGRCHPS*IPTTYN
Trigger: ATTATATGTAGTTGGAATCCAGGAAGGGTGACAGCG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp TTCCGACCGAGACGAGTTACACCACTTAATGACGTAGTCGCAAGTCATGTTGGGAATTTGGTGCAACAATaGGAGCCAATTCTTCTATAT +
Preference number: 4 (lower is better)
Translates to: FRPRRVTPLNDVVASHVGNLVQQ*EPILLY
Trigger: ATATAGAAGAATTGGCTCCCATTGTTGCACCAAATT...CCCAACATGACTTGCGACTACGTCATTAAGTGGTGTAACTCGTCTCGGTCGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGACAGTTTTCTGGATTTaGAATATCAGGGTAGAAGGT +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMTVFWI*NIRVEG
Trigger: ACCTTCTACCCTGATATTCCAAATCCAGAAAACTGT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTATCTGCGGCTGGGTTTaGTATTTCTTCCTCAATGAT +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFICGWV*YFFLND
Trigger: ATCATTGAGGAAGAAATACCAAACCCAGCCGCAGAT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGTTCTTGTTCTTCTTCTaGTTTTGCTTGAGGCTGATA +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMFLFFF*FCLRLI
Trigger: TATCAGCCTCAAGCAAAACCAGAAGAAGAACAAGAA...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCTACATGAGAATTCTTTaGCTTGATCACAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVYMRIL*LDHKEL
Trigger: GAGCTCTTTGTGATCAAGCCAAAGAATTCTCATGTA...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATAACATGATTATGATTTaGGCTGGTCAGTGTCACACT +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYNMIMI*AGQCHT
Trigger: AGTGTGACACTGACCAGCCCAAATCATAATCATGTT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGCTGGATCAGATAATGTaGCATGATGAAAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMLDQIM*HDEKTH
Trigger: ATGAGTCTTTTCATCATGCCACATTATCTGATCCAG...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAACACAAGCTAGATTTTaGTGTGTATCACCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGTQARF*CVSPFR
Trigger: CCTGAAGGGTGATACACACCAAAATCTAGCTTGTGT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCAGCCACTGGAAATTTaGAGCAGTCCTCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYQPLEI*SSPHSF
Trigger: AAAAGAATGAGGACTGCTTCAAATTTCCAGTGGCTG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAGGAAAAACCTTAGTCTaGGAATCAGGTATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGGKTLV*ESGIQE
Trigger: TTCTTGGATACCTGATTCTCAGACTAAGGTTTTTCC...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTCGACCCAGCGGATTGTaGGCATTCAAAGTAAAATTA +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPRPSGL*AFKVKL
Trigger: TAATTTTACTTTGAATGCTCACAATCCGCTGGGTCG...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATCCGCTGCTCTTGTACTaGATTAGATTTCTTAATTTC +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYPLLLY*IRFLNF
Trigger: GAAATTAAGAAATCTAATTCAGTACAAGAGCAGCGG...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTCACCAAGTATACACATaGGAAAACCACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFHQVYT*ENHKQQ
Trigger: CTGTTGTTTGTGGTTTTCTCATGTGTATACTTGGTG...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATCAGAGGATGCTGTGCTaGAGGCAATCAATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHQRMLC*RQSILH
Trigger: GTGCAGAATTGATTGCCTTCAGCACAGCATCCTCTG...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTAAAGTAGGGGAAAGGTaGGTGATATTCTGCACTTTT +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFKVGER*VIFCTF
Trigger: AAAAGTGCAGAATATCACTCACCTTTCCCCTACTTT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATAAGAAAATTAGTTACTaGGCTTTCACGATGTGCCTA +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYKKISY*AFTMCL
Trigger: TAGGCACATCGTGAAAGCTCAGTAACTAATTTTCTT...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTTCAGGAAAATTCTGTTaGATCTGTGACACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPSGKFC*ICDTLG
Trigger: TCCCAGAGTGTCACAGATTCAACAGAATTTTCCTGA...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATGCTAAGTCTAAAAGATaGATGTTCTGTAACTTTGGC +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYAKSKR*MFCNFG
Trigger: GCCAAAGTTACAGAACATTCATCTTTTAGACTTAGC...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTACCCCTCCACAACAATaGAAGGTTTCTTTTTCGTGT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPTPPQQ*KVSFSC
Trigger: ACACGAAAAAGAAACCTTTCATTGTTGTGGAGGGGT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTTTCTGTGAATCAGACTaGATCACACACATGTACTTC +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFFCESD*ITHMYF
Trigger: GAAGTACATGTGTGTGATTCAGTCTGATTCACAGAA...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGATGAAGTGTATCTTTaGCATTCAGAGTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYDEVYL*HSELCC
Trigger: ACAACACAACTCTGAATGGCAAAGATACACTTCATC...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATAAGTTGCCTGGTAAATaGCAAGAAAGTTTAACAGCT +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYKLPGK*QESLTA
Trigger: AGCTGTTAAACTTTCTTGGCATTTACCAGGCAACTT...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATCTATTACAGTTTCAGTaGTGTTTGAGGGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYLLQFQ*CLRELF
Trigger: GAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAG...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTAGACCACCTTGTAAATaGAGGCATGCAACCTTCATT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPRPPCK*RHATFI
Trigger: AATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGTTGATAACAGCCACTaGAAATTTGAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYVDNSH*KFEAVL
Trigger: GAGGACTGCTTCAAATTTCCAGTGGCTGTTATCAAC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGCCCCTTTGAAGGACTaGCTTCTGTTGTTAAATGTT +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYAPLKD*LLLLNV
Trigger: AACATTTAACAACAGAAGCCAGTCCTTCAAAGGGGC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGATTCTCAGTGTCTTCTaGGATATGTCAGTAATATTC +
Preference number: 4 (lower is better)
Translates to: VASKGEATNLTGQSTISMILSVF*DMSVIF
Trigger: GAATATTACTGACATATCCCAGAAGACACTGAGAAT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAGACAGCCACTGCCACTaGGATGAGAATGGCAATAAT +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKDSHCH*DENGNN
Trigger: ATTATTGCCATTCTCATCCCAGTGGCAGTGGCTGTC...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATTACATGAGAATTCTTTaGCTTGATCACAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYYMRIL*LDHKEL
Trigger: GAGCTCTTTGTGATCAAGCCAAAGAATTCTCATGTA...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCCAATCAGAACTATATaGACAGCTAACGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYPIRTI*TANAAR
Trigger: TCTAGCAGCGTTAGCTGTCCATATAGTTCTGATTGG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTCACTTATCCTTGTCCTaGAGAGATAAAGTACGGGAT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPHLSLS*RDKVRD
Trigger: ATCCCGTACTTTATCTCTCCAGGACAAGGATAAGTG...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATAGCCACGAATCTAACTaGACAGAGCACAATCAGTAT +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYSHESN*TEHNQY
Trigger: ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATAAGCTTCTCAGTGAATaGCTGCTTCTGTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYKLLSE*LLLFLS
Trigger: GCTTAGAAACAGAAGCAGCCATTCACTGAGAAGCTT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 72 bp TCTTTCAGATCCACGAGCGGTGAAAGTAATGCTGGTTaGGAAAATGAGGTTGATACTTCCTCTCTTAAGCTT +
Preference number: 4 (lower is better)
Translates to: SFRSTSGESNAG*ENEVDTSSLKL
Trigger: AAGCTTAAGAGAGGAAGTATCAACCTCATTTTCCAAACCAGCATTACTTTCACCGCTCGTGGATCTGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AAATTTGGTGCAACAATGGGAGCCAATTCTTCTATATATCCAATCATGGAGCGTAGTTTCAGTGCTGTTTaGGGGAACTTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: KFGATMGANSSIYPIMERSFSAV*GNFSPV
Trigger: GACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACT...ACGCTCCATGATTGGATATATAGAAGAATTGGCTCCCATTGTTGCACCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGATAAAGTACGGGATTaGTACATTTCAACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPDKVRD*YISTGN
Trigger: GTTCCCTGTTGAAATGTATCAATCCCGTACTTTATC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGCTAAGTCTAAAAGATaGATGTTCTGTAACTTTGGC +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFAKSKR*MFCNFG
Trigger: GCCAAAGTTACAGAACATTCATCTTTTAGACTTAGC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTCCAAATCACACTCCCTaGAACATTACCATGTACAAT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPPNHTP*NITMYN
Trigger: ATTGTACATGGTAATGTTTCAGGGAGTGTGATTTGG...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGGGACCTGTTTTCAATaGAAACTTCATAATCAGTAC +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFGTCFQ*KLHNQY
Trigger: GTACTGATTATGAAGTTTGCATTGAAAACAGGTCCC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATATTACGAATCTTGATTaGAACATTTTCCCCATCAAG +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYITNLD*NIFPIK
Trigger: CTTGATGGGGAAAATGTTGCAATCAAGATTCGTAAT...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGCTTTCGTTTGTAGGTaGTTCAGCTCTTTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYAFVCR*FSSFKS
Trigger: AGACTTAAAAGAGCTGAAGCACCTACAAACGAAAGC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGCTTTCGTTTGTAGGTaGTTCAGCTCTTTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPAFVCR*FSSFKS
Trigger: AGACTTAAAAGAGCTGAAGCACCTACAAACGAAAGC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAAACGCTGCTAGATATTaGTTAGTAGTCATCTCACAT +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGNAARY*LVVISH
Trigger: ATGTGAGATGACTACTAAGCAATATCTAGCAGCGTT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATATAGCGCTATGTGATTaGTTTACAACCACTGTATTT +
Preference number: 4 (lower is better)
Translates to: IPPRMPSADVATLAVRAYIALCD*FTTTVF
Trigger: AAATACAGTGGTTGTAAAGCAATCACATAGCGCTAT...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS-3UTR CCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTTTTCCACAAAATGAATaGCACATTCCAAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFFPQNE*HIPRAY
Trigger: ATATGCCCTTGGAATGTGCCATTCATTTTGTGGAAA...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTTTGAGGAGTATCTGGTaGATATCCAGCAAAAATAAC +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFLRSIW*ISSKNN
Trigger: GTTATTTTTGCTGGATATCCACCAGATACTCCTCAA...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTTTGTTGAGGAGTATCTaGTGGATATCCAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFLLRSI*WISSKN
Trigger: ATTTTTGCTGGATATCCACCAGATACTCCTCAACAA...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCTCAACAGTAAAATTTaGTGCAACAATGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYLNSKI*CNNGSQ
Trigger: TTGGCTCCCATTGTTGCACCAAATTTTACTGTTGAG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CCTGGTCGAAACTCATCAGATTCTATTACAGTTTCAGTGCTGTTTGAGGGAACTCTCAACAGTAAAATTTaGTGCAACAATGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PGRNSSDSITVSVLFEGTLNSKI*CNNGSQ
Trigger: TTGGCTCCCATTGTTGCACCAAATTTTACTGTTGAG...AGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCTGATGAGTTTCGACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATAGCTTCATCTGCGGCTaGGTTTGGTATTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHSFICG*VWYFFL
Trigger: GAGGAAGAAATACCAAACCCAGCCGCAGATGAAGCT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGATTATGATTTGGGCTaGTCAGTGTCACACTTGTTT +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYDYDLG*SVSHLF
Trigger: AAACAAGTGTGACACTGACCAGCCCAAATCATAATC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTAACATGATTATGATTTaGGCTGGTCAGTGTCACACT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPNMIMI*AGQCHT
Trigger: AGTGTGACACTGACCAGCCCAAATCATAATCATGTT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATGGCCCTGGATCCAGATaGTCACAGTTGAAATGCATA +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHGPGSR*SQLKCI
Trigger: TATGCATTTCAACTGTGACCATCTGGATCCAGGGCC...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAGAATCTGTGACACTCTaGGATAGGACTCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKESVTL*DRTQSR
Trigger: TCTTGACTGAGTCCTATCCCAGAGTGTCACAGATTC...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTAAGGACCTTGACTTATaGCCAGCTAATGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPKDLDL*PANERE
Trigger: TTCTCTTTCATTAGCTGGCCATAAGTCAAGGTCCTT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATAGTTTCAGTGCTGTTTaGGGGAACTTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHSFSAV*GNFSPV
Trigger: GACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAGACAACTGAACATGTaGCCAATCTCCTTCCAACTT +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKRQLNM*PISFQL
Trigger: AAGTTGGAAGGAGATTGGTCACATGTTCAGTTGTCT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAGTATCTCAGACAACTaGACATGTGACCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKSISDN*TCDQSP
Trigger: AGGAGATTGGTCACATGTTCAGTTGTCTGAGATACT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTACTATCCCACAGATATaGTGGAACATAATGCTAGTT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPTIPQI*WNIMLV
Trigger: AACTAGCATTATGTTCCATCATATCTGTGGGATAGT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAGTGATATACAGGCATaGGTCCTTCCTCAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKSDIQA*VLPQFS
Trigger: TGAAAACTGAGGAAGGACTCATGCCTGTATATCACT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGAACAGTTCCACACTTaGAAATTGTTAGTTACACAC +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYEQFHT*KLLVTH
Trigger: GTGTGTAACTAACAATTTGCAAGTGTGGAACTGTTC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCTATTACAGTTTCAGTaGTGTTTGAGGGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYLLQFQ*CLRELF
Trigger: GAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAATATCCATCATCTGTaGAATGCAGTCAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKNIHHL*NAVSRY
Trigger: GTACCGACTGACTGCATTGCACAGATGATGGATATT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATGTCCACCATCCAGGATaGTCGTTTCAAACATACGTA +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHVHHPG*SFQTYV
Trigger: TACGTATGTTTGAAACGACCATCCTGGATGGTGGAC...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATTTGAGGAGTATCTGGTaGATATCCAGCAAAAATAAC +
Preference number: 4 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYLRSIW*ISSKNN
Trigger: GTTATTTTTGCTGGATATCCACCAGATACTCCTCAA...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GTCGAAACTCATCAGATTCTATTACAGTTTCAGTGCTGTTTGAGGGAACTTTTCGCCCCTTTGAAGGACTaGCTTCTGTTGTTAAATGTT +
Preference number: 4 (lower is better)
Translates to: VETHQILLQFQCCLRELFAPLKD*LLLLNV
Trigger: AACATTTAACAACAGAAGCCAGTCCTTCAAAGGGGC...GAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCTGATGAGTTTCGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CCA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAATTCTCAGTGTCTTCTaGGATATGTCAGTAATATTC +
Preference number: 4 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGILSVF*DMSVIF
Trigger: GAATATTACTGACATATCCCAGAAGACACTGAGAAT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTACAGTTTTCTGGATTTaGAATATCAGGGTAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPTVFWI*NIRVEG
Trigger: ACCTTCTACCCTGATATTCCAAATCCAGAAAACTGT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATTCCATGTATTTACATTaGCCTGAGGTCTGTAACCCG +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHSMYLH*PEVCNP
Trigger: CGGGTTACAGACCTCAGGCCAATGTAAATACATGGA...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATGAAAAGACTCATGAGTaGGAGGAACATCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHEKTHE*EEHPPE
Trigger: TTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTC...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 72 bp CACAAACAACAGAACAGAAAACAGTTGCGGCGGGATTaGTTTTACATGTACGTACAAGTAGGTATTAGCCTT +
Preference number: 4 (lower is better)
Translates to: HKQQNRKQLRRD*FYMYVQVGISL
Trigger: AAGGCTAATACCTACTTGTACGTACATGTAAAACAAATCCCGCCGCAACTGTTTTCTGTTCTGTTGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 72 bp GTAATATCCTGGGATCTACACAAGGGTCTAGCTGTCTaGAATTCAATGAGGGAAAAGAAGGAAAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: VISWDLHKGLAV*NSMREKKENCF
Trigger: AAAGCAGTTTTCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAGGATATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 72 bp TTGAGATCATCATTTGGAATTTCCATACTCGCTATTTaGGAAGGTGGTGATGAGCCCACAGAATTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: LRSSFGISILAI*EGGDEPTEFLA
Trigger: GGCTAAAAATTCTGTGGGCTCATCACCACCTTCCAAAATAGCGAGTATGGAAATTCCAAATGATGATCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR TCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAATCACAATTCAGTTGTTaGGGAGTATCTGGTGGATAT +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKSQFSC*GVSGGY
Trigger: ATATCCACCAGATACTCCTCAACAACTGAATTGTGA...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATAAGAGCTCCCAATCTTaGGTTTTGTGGATTGAGGAT +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHKSSQS*VLWIED
Trigger: ATCCTCAATCCACAAAACTCAAGATTGGGAGCTCTT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAAGGGAAGCTTGATTTaGAACTGGCTTGTAAGTGAA +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKKGSLI*NWLVSE
Trigger: TTCACTTACAAGCCAGTTTCAAATCAAGCTTCCCTT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATTCAGGAAAATTCTGTTaGATCTGTGACACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHSGKFC*ICDTLG
Trigger: TCCCAGAGTGTCACAGATTCAACAGAATTTTCCTGA...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAACCAAATCACACTCCCTaGAACATTACCATGTACAAT +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKPNHTP*NITMYN
Trigger: ATTGTACATGGTAATGTTTCAGGGAGTGTGATTTGG...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAATTCTGTGAATCAGACTaGATCACACACATGTACTTC +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKFCESD*ITHMYF
Trigger: GAAGTACATGTGTGTGATTCAGTCTGATTCACAGAA...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp TCTGCAGAAGTATCCTCAACAGTAAAATTTGGTGCAACAATGGGAGCCAATTCTCTATTACAGTTTCAGTaGTGTTTGAGGGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: SAEVSSTVKFGATMGANSLLQFQ*CLRELF
Trigger: GAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAG...AGAATTGGCTCCCATTGTTGCACCAAATTTTACTGTTGAGGATACTTCTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR GCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATAATGTAAATAACCTGTaGAGTCCCTCCAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHNVNNL*SPSSFI
Trigger: GATGAAGCTGGAGGGACTGCACAGGTTATTTACATT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAATTCTTCTTCTGGTTTTaGTTGAGGCTGATACATCGA +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKFFFWF*LRLIHR
Trigger: TCGATGTATCAGCCTCAAGCAAAACCAGAAGAAGAA...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATAGACCACCTTGTAAATaGAGGCATGCAACCTTCATT +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHRPPCK*RHATFI
Trigger: AATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTAATTTGGTGCAACAATaGGAGCCAATTCTTCTATAT +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPNLVQQ*EPILLY
Trigger: ATATAGAAGAATTGGCTCCCATTGTTGCACCAAATT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTAACCTCAACATTATTTaGGGTACAAGGATTCATTTC +
Preference number: 4 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPNLNII*GTRIHF
Trigger: GAAATGAATCCTTGTACCCCAAATAATGTTGAGGTT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATAGCCACGAATCTAACTaGACAGAGCACAATCAGTAT +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHSHESN*TEHNQY
Trigger: ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATTTTTCACTCAAACCGTaGAGTCACTTCCGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHFSLKP*SHFRSR
Trigger: TCTACTTCGGAAGTGACTCCACGGTTTGAGTGAAAA...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATGACTTAATGGACAGATaGATGTTACACCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHDLMDR*MLHQWH
Trigger: GTGCCATTGGTGTAACATCCATCTGTCCATTAAGTC...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453190.7
3UTR CAA 72 bp AAACATGATTATGATTTGGGCTGGTCAGTGTCACACTaGTTTTCAAAGTTTGTACCCCTGAGACAACTGTTT +
Preference number: 4 (lower is better)
Translates to: KHDYDLGWSVSH*FSKFVPLRQLF
Trigger: AAACAGTTGTCTCAGGGGTACAAACTTTGAAAACAAGTGTGACACTGACCAGCCCAAATCATAATCATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 72 bp TCAGATCAGTTTATGACAGTTACTAAGAAACAGCCCTaGGGTAACTGTTCCTGTAAGAAGCATTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SDQFMTVTKKQP*GNCSCKKHSLF
Trigger: AAAGAGAGAATGCTTCTTACAGGAACAGTTACCCAAGGGCTGTTTCTTAGTAACTGTCATAAACTGATCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAATCACAGACACTCTTTTaGAACTGTAATGCTTTACAG +
Preference number: 4 (lower is better)
Translates to: IQILRATISNLGLYKFNKSQTLF*NCNALQ
Trigger: CTGTAAAGCATTACAGTTTCAAAAGAGTGTCTGTGA...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATTCCCACATTTTACTCTaGGATGCCCAATTTTACACT +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHSHILL*DAQFYT
Trigger: AGTGTAAAATTGGGCATCTCAGAGTAAAATGTGGGA...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
3UTR CAA 72 bp TACCCCTCCACAACAATGAAAGGTTTCTTTTTCGTGTaGTCTCCCGCTACTCACAATGTTATTCATATTTTT +
Preference number: 4 (lower is better)
Translates to: YPSTTMKGFFFV*SPATHNVIHIF
Trigger: AAAAATATGAATAACATTGTGAGTAGCGGGAGACAACACGAAAAAGAAACCTTTCATTGTTGTGGAGGGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATCCGCTGCTCTTGTACTaGATTAGATTTCTTAATTTC +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHPLLLY*IRFLNF
Trigger: GAAATTAAGAAATCTAATTCAGTACAAGAGCAGCGG...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATTCACAGACACTCTTTTaGAACTGTAATGCTTTACAG +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHSQTLF*NCNALQ
Trigger: CTGTAAAGCATTACAGTTTCAAAAGAGTGTCTGTGA...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR TCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATACTATCCCACAGATATaGTGGAACATAATGCTAGTT +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHTIPQI*WNIMLV
Trigger: AACTAGCATTATGTTCCATCATATCTGTGGGATAGT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR GCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATGATGAAGTGTATCTTTaGCATTCAGAGTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHDEVYL*HSELCC
Trigger: ACAACACAACTCTGAATGGCAAAGATACACTTCATC...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATTTCTTGTTCTTCTTCTaGTTTTGCTTGAGGCTGATA +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHFLFFF*FCLRLI
Trigger: TATCAGCCTCAAGCAAAACCAGAAGAAGAACAAGAA...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CCA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATAATTTGGTGCAACAATaGGAGCCAATTCTTCTATAT +
Preference number: 4 (lower is better)
Translates to: AARYCLVVISHSKSLELHNLVQQ*EPILLY
Trigger: ATATAGAAGAATTGGCTCCCATTGTTGCACCAAATT...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS GCA 90 bp CGCCTCCGCAGCCGCCGTCTCGCCTCCCCTGTGTCGGCGCGAGGCTaGTTGAGGCGGCCACGGGCGAAGGGCGGCCCGCTGCGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: RLRSRRLASPVSARG*LRRPRAKGGPLRSA
Trigger: CGCGGAGCGCAGCGGGCCGCCCTTCGCCCGTGGCCGCCTCAAGCAGCCTCGCGCCGACACAGGGGAGGCGAGACGGCGGCTGCGGAGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453190.7
ENST00000506990.5
CDS TCA 90 bp TCCGCAGCCGCCGTCTCGCCTCCCCTGTGTCGGCGCGAGGCTGCTTaGGGCGGCCACGGGCGAAGGGCGGCCCGCTGCGCTCCGCGAACC +
Preference number: 5 (lower is better)
Translates to: SAAAVSPPLCRREAA*GGHGRRAARCAPRT
Trigger: GGTTCGCGGAGCGCAGCGGGCCGCCCTTCGCCCGTGGCCGCCTCAAGCAGCCTCGCGCCGACACAGGGGAGGCGAGACGGCGGCTGCGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453190.7
ENST00000506990.5
CDS GCA 90 bp AAACAGCCCAGGGCCGAGGCGCCGCCGCTCGCGTCCTGGTCCTCCTaGCGGGTGTGGGGCTCCCCTGCCCGAGATGGCCAGCGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: KQPRAEAPPLASWSS*RVWGSPARDGQRAR
Trigger: GCGCGCCCGCTGGCCATCTCGGGCAGGGGAGCCCCACACCCGGCAGGAGGACCAGGACGCGAGCGGCGGCGCCTCGGCCCTGGGCTGTTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS CCA 90 bp AGGGCCGAGGCGCCGCCGCTCGCGTCCTGGTCCTCCTGCCGGGTGTaGGGCTCCCCTGCCCGAGATGGCCAGCGGGCGCGCCGAGAGTAT +
Preference number: 5 (lower is better)
Translates to: RAEAPPLASWSSCRV*GSPARDGQRARREY
Trigger: ATACTCTCGGCGCGCCCGCTGGCCATCTCGGGCAGGGGAGCCCCACACCCGGCAGGAGGACCAGGACGCGAGCGGCGGCGCCTCGGCCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS GCA 90 bp GCCGCCGCTCGCGTCCTGGTCCTCCTGCCGGGTGTGGGGCTCCCCTaGCCGAGATGGCCAGCGGGCGCGCCGAGAGTATCCTGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: AAARVLVLLPGVGLP*PRWPAGAPRVSWSH
Trigger: ATGGCTCCAGGATACTCTCGGCGCGCCCGCTGGCCATCTCGGGCAGGGGAGCCCCACACCCGGCAGGAGGACCAGGACGCGAGCGGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS CCA 90 bp GTCAGTCCTAAACAGCCCAGGGCCGAGGCGCCGCCGCTCGCGTCCTaGTCCTCCTGCCGGGTGTGGGGCTCCCCTGCCCGAGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: VSPKQPRAEAPPLAS*SSCRVWGSPARDGQ
Trigger: CTGGCCATCTCGGGCAGGGGAGCCCCACACCCGGCAGGAGGACCAGGACGCGAGCGGCGGCGCCTCGGCCCTGGGCTGTTTAGGACTGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS CCA 90 bp CGCGTCCTGGTCCTCCTGCCGGGTGTGGGGCTCCCCTGCCCGAGATaGCCAGCGGGCGCGCCGAGAGTATCCTGGAGCCATCTAGTCTTG +
Preference number: 5 (lower is better)
Translates to: RVLVLLPGVGLPCPR*PAGAPRVSWSHLVL
Trigger: CAAGACTAGATGGCTCCAGGATACTCTCGGCGCGCCCGCTGGCCATCTCGGGCAGGGGAGCCCCACACCCGGCAGGAGGACCAGGACGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS CCA 90 bp GGGCTCCCCTGCCCGAGATGGCCAGCGGGCGCGCCGAGAGTATCCTaGAGCCATCTAGTCTTGCCTCGGAGGCGGGGTGGGCTTATTTGT +
Preference number: 5 (lower is better)
Translates to: GLPCPRWPAGAPRVS*SHLVLPRRRGGLIC
Trigger: ACAAATAAGCCCACCCCGCCTCCGAGGCAAGACTAGATGGCTCCAGGATACTCTCGGCGCGCCCGCTGGCCATCTCGGGCAGGGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS-3UTR CAA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATTCCCGCGCCGCTATCTaGCCATCCCCTGCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDSRAAI*PSPAAG
Trigger: GCCGGCGGCAGGGGATGGCAAGATAGCGGCGCGGGA...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS GCA 90 bp TGGTCTTGCAAGTGCAGTTCTGCAGAGCGAAAGGGCCCGGTGCCTTaGAGCAGAGACACGTTCATAGCTCTGCAGGCTGTACAGAAAACA +
Preference number: 5 (lower is better)
Translates to: WSCKCSSAERKGPVP*SRDTFIALQAVQKT
Trigger: TGTTTTCTGTACAGCCTGCAGAGCTATGAACGTGTCTCTGCTGCAAGGCACCGGGCCCTTTCGCTCTGCAGAACTGCACTTGCAAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507786.1
CDS TCA 90 bp CCCGCCACCGCACCTGGCAGATTCTATTACAGTTTCAGTGCTGTTTaGGGGAACTTTTCTCCAGTCCATAAGGCATGGTTCCGACCGAGA +
Preference number: 5 (lower is better)
Translates to: PATAPGRFYYSFSAV*GNFSPVHKAWFRPR
Trigger: TCTCGGTCGGAACCATGCCTTATGGACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCTGCCAGGTGCGGTGGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503088.1
CDS-3UTR CAA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATAAGTATCAGGCCCCTTaGAAGGACTGGCTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDKYQAP*KDWLLL
Trigger: CAACAGAAGCCAGTCCTTCAAAGGGGCCTGATACTT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGGAACAAGGCAGGAGTaGAGGGCAAGCAGACAATGC +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVGTRQE*RASRQC
Trigger: GCATTGTCTGCTTGCCCTCAACTCCTGCCTTGTTCC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCAGAAGGAAAACTGCTTaGGCCCCAGACATAAATCAC +
Preference number: 5 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSRRKTA*APDINH
Trigger: GTGATTTATGTCTGGGGCCAAAGCAGTTTTCCTTCT...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCCTTTGCCATTCAGAGTaGTGTTGTGGGTCACTAATT +
Preference number: 5 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSLCHSE*CCGSLI
Trigger: AATTAGTGACCCACAACACAACTCTGAATGGCAAAG...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACACACGGACACACTGTaGGGCAGAACACATGCTGGC +
Preference number: 5 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGHTDTL*GRTHAG
Trigger: GCCAGCATGTGTTCTGCCCAACAGTGTGTCCGTGTG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS TCA 90 bp TGCAGTCAGTCCTATTACAAAGCAAAGAAGTCTCAATTCAATTCTTaGAGAGGAAATAGCTGCTCCGATCACGGTACGCTCCCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: CSQSYYKAKKSQFNS*RGNSCSDHGTLPRR
Trigger: GCGGCGCGGGAGCGTACCGTGATCGGAGCAGCTATTTCCTCTTCAAGAATTGAATTGAGACTTCTTTGCTTTGTAATAGGACTGACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506990.5
CDS CCA 90 bp GTAAATAACCTGTGCAGTCCCTCCAGCTTCATCTGCGGCTGGGTTTaGTATTTCTTCCTCAATGATGGGTGGACAATAGGACACAACCAC +
Preference number: 5 (lower is better)
Translates to: VNNLCSPSSFICGWV*YFFLNDGWTIGHNH
Trigger: GTGGTTGTGTCCTATTGTCCACCCATCATTGAGGAAGAAATACCAAACCCAGCCGCAGATGAAGCTGGAGGGACTGCACAGGTTATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCTCCATACTCGCTATTTaGGAAGGTGGTGATGAGCCC +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVSILAI*EGGDEP
Trigger: GGGCTCATCACCACCTTCCAAAATAGCGAGTATGGA...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GAGGGAACTTTTCTCCAGTCCATAAGGCATGGTTCCGACCGAGACGAGTTACACCAGTTTCAGTGCTGTTaGAGGGAACTTTTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: EGTFLQSIRHGSDRDELHQFQCC*RELFSS
Trigger: ACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTG...GTGTAACTCGTCTCGGTCGGAACCATGCCTTATGGACTGGAGAAAAGTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CAA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCCCACAGAATTTTCCTTaGTCACCACATACATACTCT +
Preference number: 5 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSPQNFP*SPHTYS
Trigger: AGAGTATGTATGTGGTGACAAAGGAAAATTCTGTGG...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS GCA 90 bp AATGATGGGTGGACAATAGGACACAACCACATGGTTTTCAGGCTCTaGATCAGAGCGATCTTCAGGACGCTCAGCTACTGGGGAAATTAT +
Preference number: 5 (lower is better)
Translates to: NDGWTIGHNHMVFRL*IRAIFRTLSYWGNY
Trigger: ATAATTTCCCCAGTAGCTGAGCGTCCTGAAGATCGCTCTGATGCAGAGCCTGAAAACCATGTGGTTGTGTCCTATTGTCCACCCATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS CCA 90 bp AGCTTCATCTGCGGCTGGGTTTGGTATTTCTTCCTCAATGATGGGTaGACAATAGGACACAACCACATGGTTTTCAGGCTCTGCATCAGA +
Preference number: 5 (lower is better)
Translates to: SFICGWVWYFFLNDG*TIGHNHMVFRLCIR
Trigger: TCTGATGCAGAGCCTGAAAACCATGTGGTTGTGTCCTATTGTCCACCCATCATTGAGGAAGAAATACCAAACCCAGCCGCAGATGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTTAATCTTTGCAAAGTaGCCTGGTAAATGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSLIFAK*PGKCQE
Trigger: TTCTTGGCATTTACCAGGCAACTTTGCAAAGATTAA...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATTCCATACTCGCTATTTaGGAAGGTGGTGATGAGCCC +
Preference number: 5 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYSILAI*EGGDEP
Trigger: GGGCTCATCACCACCTTCCAAAATAGCGAGTATGGA...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATCTTGAGTTTTGTGGATaGAGGATTCTGAGTCACTAT +
Preference number: 5 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDLEFCG*RILSHY
Trigger: ATAGTGACTCAGAATCCTCAATCCACAAAACTCAAG...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAACTTCACCTGTTACTaGGACATTTTCTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: VASKGEATNLTGQSTISMNFTCY*DIFSLA
Trigger: GGCCAGGGAGAAAATGTCCAAGTAACAGGTGAAGTT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGGAACAAGGCAGGAGTaGAGGGCAAGCAGACAATGC +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPGTRQE*RASRQC
Trigger: GCATTGTCTGCTTGCCCTCAACTCCTGCCTTGTTCC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AAGGTGTCAAAGATCACCACTGCCTGGGTAGCCAAGCTCAACGGCATGGTCTCCTCCAGATGGTCACAGTaGAAATGCATATATATTGAC +
Preference number: 5 (lower is better)
Translates to: KVSKITTAWVAKLNGMVSSRWSQ*KCIYID
Trigger: GTCAATATATATGCATTTCAACTGTGACCATCTGGA...GGAGACCATGCCGTTGAGCTTGGCTACCCAGGCAGTGGTGATCTTTGACACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATAAGGACTTGCAATGTTaGTTAAATATGGACGGCATG +
Preference number: 5 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDKDLQC*LNMDGM
Trigger: CATGCCGTCCATATTTAACAAACATTGCAAGTCCTT...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAAAAAGGGAACAGTTaGGGATCCGCAGTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYEKGNS*GSAVSP
Trigger: GGGAGAAACTGCGGATCCCAAACTGTTCCCTTTTTC...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS TCA 90 bp GGGTGGGCTTATTTGTGCGGAGAAGAAACGGATCTCTTAATGGGGTaGGATTTTTCCTCCGTACATTGTTCCCATTTCCGCAGTTTCACT +
Preference number: 5 (lower is better)
Translates to: GWAYLCGEETDLLMG*DFSSVHCSHFRSFT
Trigger: AGTGAAACTGCGGAAATGGGAACAATGTACGGAGGAAAAATCTCACCCCATTAAGAGATCCGTTTCTTCTCCGCACAAATAAGCCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS GCA 90 bp CCAAGGGCATATCTGAGGCCCAACTCCAGTGATGAAGTGTATCTTTaGCATTCAGAGTTGTGTTGTGGGTCACTAATTTTACGAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PRAYLRPNSSDEVYL*HSELCCGSLILRAP
Trigger: TGGAGCTCGTAAAATTAGTGACCCACAACACAACTCTGAATGGCAAAGATACACTTCATCACTGGAGTTGGGCCTCAGATATGCCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
CDS GCA 90 bp TGCTTGAGGCTGATACATCGACTGAACATCAATGTAAATAACCTGTaGAGTCCCTCCAGCTTCATCTGCGGCTGGGTTTGGTATTTCTTC +
Preference number: 5 (lower is better)
Translates to: CLRLIHRLNINVNNL*SPSSFICGWVWYFF
Trigger: GAAGAAATACCAAACCCAGCCGCAGATGAAGCTGGAGGGACTGCACAGGTTATTTACATTGATGTTCAGTCGATGTATCAGCCTCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS CCA 90 bp ATCAATGTAAATAACCTGTGCAGTCCCTCCAGCTTCATCTGCGGCTaGGTTTGGTATTTCTTCCTCAATGATGGGTGGACAATAGGACAC +
Preference number: 5 (lower is better)
Translates to: INVNNLCSPSSFICG*VWYFFLNDGWTIGH
Trigger: GTGTCCTATTGTCCACCCATCATTGAGGAAGAAATACCAAACCCAGCCGCAGATGAAGCTGGAGGGACTGCACAGGTTATTTACATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGGATCAAGGGGCAGTTaGTATGGCCAATCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYGSRGS*YGQSVL
Trigger: CAGCACTGATTGGCCATACAAACTGCCCCTTGATCC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGGATCAAGGGGCAGTTaGTATGGCCAATCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPGSRGS*YGQSVL
Trigger: CAGCACTGATTGGCCATACAAACTGCCCCTTGATCC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCTTCTTCTGGTTTTGCTaGAGGCTGATACATCGACTG +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVFFWFC*RLIHRL
Trigger: CAGTCGATGTATCAGCCTCAAGCAAAACCAGAAGAA...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGACTAAGAAACAGCCCTaGGGTAACTGTTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: VASKGEATNLTGQSTISMTKKQP*GNCSCK
Trigger: CTTACAGGAACAGTTACCCAAGGGCTGTTTCTTAGT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTGCACAGCTCACCAAGCAATTGCTGCACCTGCAACACAGGTATGCCCATGGATTCCAGATGGTCACAGTaGAAATGCATATATATTGAC +
Preference number: 5 (lower is better)
Translates to: LHSSPSNCCTCNTGMPMDSRWSQ*KCIYID
Trigger: GTCAATATATATGCATTTCAACTGTGACCATCTGGA...ATCCATGGGCATACCTGTGTTGCAGGTGCAGCAATTGCTTGGTGAGCTGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGGCATGCAACCTTCATaGACAAACAGCGCACATTTA +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVGMQPS*TNSAHL
Trigger: TAAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS GCA 90 bp CTGAACATCAATGTAAATAACCTGTGCAGTCCCTCCAGCTTCATCTaGGGCTGGGTTTGGTATTTCTTCCTCAATGATGGGTGGACAATA +
Preference number: 5 (lower is better)
Translates to: LNINVNNLCSPSSFI*GWVWYFFLNDGWTI
Trigger: TATTGTCCACCCATCATTGAGGAAGAAATACCAAACCCAGCCGCAGATGAAGCTGGAGGGACTGCACAGGTTATTTACATTGATGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATGTCCTCATTCTTTTATaGTCCACCATCCAGGATGGT +
Preference number: 5 (lower is better)
Translates to: IPPRMPSADVATLAVRAYVLILL*STIQDG
Trigger: ACCATCCTGGATGGTGGACAATAAAAGAATGAGGAC...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGAATTTTCTACTCCTTaGATTGTGACATTCCGCTGC +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVEFSTP*IVTFRC
Trigger: GCAGCGGAATGTCACAATCAAAGGAGTAGAAAATTC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGGAATTTTCTACTCCTTaGATTGTGACATTCCGCTGC +
Preference number: 5 (lower is better)
Translates to: VASKGEATNLTGQSTISMEFSTP*IVTFRC
Trigger: GCAGCGGAATGTCACAATCAAAGGAGTAGAAAATTC...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCAGACCAGGTGGTAACTaGTTTTACCTTGAAGATCAG +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVRPGGN*FYLEDQ
Trigger: CTGATCTTCAAGGTAAAACAAGTTACCACCTGGTCT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATTTCTTCTGGTTTTGCTaGAGGCTGATACATCGACTG +
Preference number: 5 (lower is better)
Translates to: IPPRMPSADVATLAVRAYFFWFC*RLIHRL
Trigger: CAGTCGATGTATCAGCCTCAAGCAAAACCAGAAGAA...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGTGGTCAGTGTCACACTaGTTTTCAAAGTTTGTACCC +
Preference number: 5 (lower is better)
Translates to: VASKGEATNLTGQSTISMWSVSH*FSKFVP
Trigger: GGGTACAAACTTTGAAAACAAGTGTGACACTGACCA...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAAACATGATTATGATTaGGGCTGGTCAGTGTCACAC +
Preference number: 5 (lower is better)
Translates to: VASKGEATNLTGQSTISMKHDYD*GWSVSH
Trigger: GTGTGACACTGACCAGCCCAAATCATAATCATGTTT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGGCATGCAACCTTCATaGACAAACAGCGCACATTTA +
Preference number: 5 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYGMQPS*TNSAHL
Trigger: TAAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCC...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGAACAAACATGCCCCAGTaGCACACCCATCAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGTNMPQ*HTHQRR
Trigger: TCTTCTTTGATGGGTGTGCAACTGGGGCATGTTTGT...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATCACACGGACACACTGTaGGGCAGAACACATGCTGGC +
Preference number: 5 (lower is better)
Translates to: AARYCLVVISHSKSLELHHTDTL*GRTHAG
Trigger: GCCAGCATGTGTTCTGCCCAACAGTGTGTCCGTGTG...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGAAAAAGGGAACAGTTaGGGATCCGCAGTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPEKGNS*GSAVSP
Trigger: GGGAGAAACTGCGGATCCCAAACTGTTCCCTTTTTC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS GCA 90 bp CATCCAGGATGGTCGTTTCAAACATACGTAAATATCCATCATCTGTaGAATGCAGTCAGTCCTAGGTTAGGAGAGGAATTCCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: HPGWSFQTYVNIHHL*NAVSPRLGEEFQMV
Trigger: CACCATCTGGAATTCCTCTCCTAACCTAGGACTGACTGCATTGCACAGATGATGGATATTTACGTATGTTTGAAACGACCATCCTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512723.1
CDS-3UTR CAA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATCTTTGCCATTCAGAGTaGTGTTGTGGGTCACTAATT +
Preference number: 5 (lower is better)
Translates to: IPPRMPSADVATLAVRAYLCHSE*CCGSLI
Trigger: AATTAGTGACCCACAACACAACTCTGAATGGCAAAG...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GATTCTATTACAGTTTCAGTGCTGTTTGAGGGAACTTTTCTCCAGTCCATAAGGTCCATACTCGCTATTTaGGAAGGTGGTGATGAGCCC +
Preference number: 5 (lower is better)
Translates to: DSITVSVLFEGTFLQSIRSILAI*EGGDEP
Trigger: GGGCTCATCACCACCTTCCAAAATAGCGAGTATGGA...CCTTATGGACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCTCCCATCCCAACAACTaGTTCTATTTTGAGATCATC +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVSHPNN*FYFEII
Trigger: GATGATCTCAAAATAGAACAAGTTGTTGGGATGGGA...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACAGTTTCAGTGCTGTTaGAGGGAACTTTTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGQFQCC*RELFSS
Trigger: ACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATAGACCAGGTGGTAACTaGTTTTACCTTGAAGATCAG +
Preference number: 5 (lower is better)
Translates to: IPPRMPSADVATLAVRAYRPGGN*FYLEDQ
Trigger: CTGATCTTCAAGGTAAAACAAGTTACCACCTGGTCT...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGTTCTTCTTCTGGTTTaGCTTGAGGCTGATACATCG +
Preference number: 5 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFVLLLV*LEADTS
Trigger: CGATGTATCAGCCTCAAGCAAAACCAGAAGAAGAAC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGAGGAGGAATCAAAAATaGTCGGGAATTAATGGAGCA +
Preference number: 5 (lower is better)
Translates to: VASKGEATNLTGQSTISMRRNQK*SGINGA
Trigger: TGCTCCATTAATTCCCGACAATTTTTGATTCCTCCT...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACAGTTGCGGCGGGATTaGTTTTACATGTACGTACAA +
Preference number: 5 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGQLRRD*FYMYVQ
Trigger: TTGTACGTACATGTAAAACAAATCCCGCCGCAACTG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATTGGTCAGTGTCACACTaGTTTTCAAAGTTTGTACCC +
Preference number: 5 (lower is better)
Translates to: IPPRMPSADVATLAVRAYWSVSH*FSKFVP
Trigger: GGGTACAAACTTTGAAAACAAGTGTGACACTGACCA...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATAAACATGATTATGATTaGGGCTGGTCAGTGTCACAC +
Preference number: 5 (lower is better)
Translates to: IPPRMPSADVATLAVRAYKHDYD*GWSVSH
Trigger: GTGTGACACTGACCAGCCCAAATCATAATCATGTTT...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATCAACTTATAAGGAGCTaGCCCAGACTTAATAGCGTT +
Preference number: 5 (lower is better)
Translates to: IPPRMPSADVATLAVRAYQLIRS*PRLNSV
Trigger: AACGCTATTAAGTCTGGGCAAGCTCCTTATAAGTTG...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCGTTTGGAAAATGAGGTaGATACTTCCTCTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVVWKMR*ILPLLS
Trigger: GCTTAAGAGAGGAAGTATCAACCTCATTTTCCAAAC...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTACAAACATGCCCCAGTaGCACACCCATCAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPTNMPQ*HTHQRR
Trigger: TCTTCTTTGATGGGTGTGCAACTGGGGCATGTTTGT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS TCA 90 bp GCATCTAATTTCCACAAAATGAATGGCACATTCCAAGGGCATATCTaGGGCCCAACTCCAGTGATGAAGTGTATCTTTGCCATTCAGAGT +
Preference number: 5 (lower is better)
Translates to: ASNFHKMNGTFQGHI*GPTPVMKCIFAIQS
Trigger: ACTCTGAATGGCAAAGATACACTTCATCACTGGAGTTGGGCCTCAGATATGCCCTTGGAATGTGCCATTCATTTTGTGGAAATTAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
CDS TCA 90 bp CTAGAACACTACGCATGCAGGATGGAAAGCACCTCAACAGCAACCTaGAACTTACAATTTTCCTTTGTCACCACATACATACTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LEHYACRMESTSTAT*NLQFSFVTTYILFS
Trigger: GGAGAAGAGTATGTATGTGGTGACAAAGGAAAATTGTAAGTTTCAGGTTGCTGTTGAGGTGCTTTCCATCCTGCATGCGTAGTGTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508477.5
CDS GCA 90 bp AAGCTTCCCTGGCTTGTGGAGACATCAATAATTGGACACAGCTGTTaGTTTAGGTATCTACTACGAGGCCAATTTTCAAATGATGGGCTT +
Preference number: 5 (lower is better)
Translates to: KLPWLVETSIIGHSC*FRYLLRGQFSNDGL
Trigger: AAGCCCATCATTTGAAAATTGGCCTCGTAGTAGATACCTAAAGCAACAGCTGTGTCCAATTATTGATGTCTCCACAAGCCAGGGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512723.1
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCAGAACAGTTCCACACTaGCAAATTGTTAGTTACACA +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVRTVPH*QIVSYT
Trigger: TGTGTAACTAACAATTTGCAAGTGTGGAACTGTTCT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGACCATTCAGAGTTGTGTaGTGGGTCACTAATTTTACG +
Preference number: 5 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGPFRVV*WVTNFT
Trigger: CGTAAAATTAGTGACCCACAACACAACTCTGAATGG...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTCTCACAATTCAGTTGTaGAGGAGTATCTGGTGGATA +
Preference number: 5 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFLTIQL*RSIWWI
Trigger: TATCCACCAGATACTCCTCAACAACTGAATTGTGAG...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTTGTCTCACAATTCAGTaGTTGAGGAGTATCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPCLTIQ*LRSIWW
Trigger: CCACCAGATACTCCTCAACAACTGAATTGTGAGACA...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAAGTATCAGGCCCCTTaGAAGGACTGGCTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: IQILRATISNLGLYKFNKKYQAP*KDWLLL
Trigger: CAACAGAAGCCAGTCCTTCAAAGGGGCCTGATACTT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GTCGAAACTCATCAGATTCTATTACAGTTTCAGTGCTGTTTGAGGGAACTTTTCAAGTATCAGGCCCCTTaGAAGGACTGGCTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: VETHQILLQFQCCLRELFKYQAP*KDWLLL
Trigger: CAACAGAAGCCAGTCCTTCAAAGGGGCCTGATACTT...GAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCTGATGAGTTTCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CAA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATTCCCATCCCAACAACTaGTTCTATTTTGAGATCATC +
Preference number: 5 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYSHPNN*FYFEII
Trigger: GATGATCTCAAAATAGAACAAGTTGTTGGGATGGGA...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCAGTTTCAGTGCTGTTaGAGGGAACTTTTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYQFQCC*RELFSS
Trigger: ACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATGGTAACTTGTTTTACCTaGAAGATCAGCAATTCTCAG +
Preference number: 5 (lower is better)
Translates to: VASKGEATNLTGQSTISMVTCFT*KISNSQ
Trigger: CTGAGAATTGCTGATCTTCAAGGTAAAACAAGTTAC...CATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCCTCCAAGAATGCCCAGTGCTGATGTAGCAACACTAGCAGTAAGAGCTTATTACAGTTTTCTGGATTaGGAATATCAGGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: IPPRMPSADVATLAVRAYYSFLD*EYQGRR
Trigger: CCTTCTACCCTGATATTCCAAATCCAGAAAACTGTA...ATAAGCTCTTACTGCTAGTGTTGCTACATCAGCACTGGGCATTCTTGGAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGTTCTTCTTCTGGTTTaGCTTGAGGCTGATACATCG +
Preference number: 5 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYVLLLV*LEADTS
Trigger: CGATGTATCAGCCTCAAGCAAAACCAGAAGAAGAAC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGAGACAATCTCACTGTaGCTGTCTATGGATCTAGGA +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPETISL*LSMDLG
Trigger: TCCTAGATCCATAGACAGCAACAGTGAGATTGTCTC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATAGCAGTAAGAGCTTATaGAGATGGCTGACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYSSKSL*RWLTEV
Trigger: CACTTCAGTCAGCCATCTCAATAAGCTCTTACTGCT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATCAGTTGCGGCGGGATTaGTTTTACATGTACGTACAA +
Preference number: 5 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYQLRRD*FYMYVQ
Trigger: TTGTACGTACATGTAAAACAAATCCCGCCGCAACTG...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTACTAAGAAACAGCCCTaGGGTAACTGTTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPTKKQP*GNCSCK
Trigger: CTTACAGGAACAGTTACCCAAGGGCTGTTTCTTAGT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATAGAAGGAAAACTGCTTaGGCCCCAGACATAAATCAC +
Preference number: 5 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYRRKTA*APDINH
Trigger: GTGATTTATGTCTGGGGCCAAAGCAGTTTTCCTTCT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTTTTGGGGAAAAGCATTaGGAATCAAACTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFFGEKH*ESNWEK
Trigger: CTTCTCCCAGTTTGATTCCAAATGCTTTTCCCCAAA...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTGGTTTCTTTTTCGTGTaGTCTCCCGCTACTCACAAT +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPGFFFV*SPATHN
Trigger: ATTGTGAGTAGCGGGAGACAACACGAAAAAGAAACC...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATGTGGCATGATGAAAAGACTCATGAGTGGGAGGAACATCCACCAGAAGGTGTCATCCAGGCCAATCTTTaGCAAGCAATTCTGAATTTA +
Preference number: 5 (lower is better)
Translates to: MWHDEKTHEWEEHPPEGVIQANL*QAILNL
Trigger: TAAATTCAGAATTGCTTGCAAAAGATTGGCCTGGAT...GACACCTTCTGGTGGATGTTCCTCCCACTCATGAGTCTTTTCATCATGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTAGTGTTATAAGGACCTaGACTTATGGCCAGCTAATG +
Preference number: 5 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFSVIRT*TYGQLM
Trigger: CATTAGCTGGCCATAAGTCAAGGTCCTTATAACACT...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS TCA 90 bp AGTCCTAGGTTAGGAGAGGAATTCCAGATGGTGTTCAGATTGTTCTaGAGGCTCACCTTATACTGTGCACACAAACACTCAAATAGATTC +
Preference number: 5 (lower is better)
Translates to: SPRLGEEFQMVFRLF*RLTLYCAHKHSNRF
Trigger: GAATCTATTTGAGTGTTTGTGTGCACAGTATAAGGTGAGCCTTCAGAACAATCTGAACACCATCTGGAATTCCTCTCCTAACCTAGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512723.1
CDS GCA 90 bp TTCAATGCAAACTTCATAATCAGTACCACGGCCTGTTCCAGAGGGTaGTTTCCAAGAACAGTTCCACACTTGCAAATTGTTAGTTACACA +
Preference number: 5 (lower is better)
Translates to: FNANFIISTTACSRG*FPRTVPHLQIVSYT
Trigger: TGTGTAACTAACAATTTGCAAGTGTGGAACTGTTCTTGGAAAGCACCCTCTGGAACAGGCCGTGGTACTGATTATGAAGTTTGCATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
ENST00000506990.5
ENST00000512723.1
CDS CCA 90 bp ACTGTACATTTAGAGACTTTGGAGATACTCAAACTCAAGCTTCCCTaGCTTGTGGAGACATCAATAATTGGACACAGCTGTTGCTTTAGG +
Preference number: 5 (lower is better)
Translates to: TVHLETLEILKLKLP*LVETSIIGHSCCFR
Trigger: CCTAAAGCAACAGCTGTGTCCAATTATTGATGTCTCCACAAGCCAGGGAAGCTTGAGTTTGAGTATCTCCAAAGTCTCTAAATGTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512723.1
CDS-3UTR CAA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATAGAACAGTTCCACACTaGCAAATTGTTAGTTACACA +
Preference number: 5 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYRTVPH*QIVSYT
Trigger: TGTGTAACTAACAATTTGCAAGTGTGGAACTGTTCT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTCCACAGAATTTTCCTTaGTCACCACATACATACTCT +
Preference number: 5 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFPQNFP*SPHTYS
Trigger: AGAGTATGTATGTGGTGACAAAGGAAAATTCTGTGG...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAACTTCACCTGTTACTaGGACATTTTCTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: IQILRATISNLGLYKFNKNFTCY*DIFSLA
Trigger: GGCCAGGGAGAAAATGTCCAAGTAACAGGTGAAGTT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp TGTAGCTTCCAAGGGAGAAGCCACGAATCTAACTGGACAGAGCACAATCAGTATATCCAGGCCAATCTTTaGCAAGCAATTCTGAATTTA +
Preference number: 5 (lower is better)
Translates to: CSFQGRSHESNWTEHNQYIQANL*QAILNL
Trigger: TAAATTCAGAATTGCTTGCAAAAGATTGGCCTGGAT...ATACTGATTGTGCTCTGTCCAGTTAGATTCGTGGCTTCTCCCTTGGAAGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTAGTGTTATAAGGACCTaGACTTATGGCCAGCTAATG +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPSVIRT*TYGQLM
Trigger: CATTAGCTGGCCATAAGTCAAGGTCCTTATAACACT...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAGAGTTGATAATGGTCTaGCAAGTGCAGTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: IQILRATISNLGLYKFNKELIMV*QVQFCR
Trigger: TCTGCAGAACTGCACTTGCAAGACCATTATCAACTC...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263409.8
CDS-3UTR CAA 90 bp CTCAGGTTAGCGCCGTTTAGAGCAATAAACTTTTACTGTAGCCACACTTATCCTCTTGAGTTTTGTGGATaGAGGATTCTGAGTCACTAT +
Preference number: 5 (lower is better)
Translates to: LRLAPFRAINFYCSHTYPLEFCG*RILSHY
Trigger: ATAGTGACTCAGAATCCTCAATCCACAAAACTCAAG...AGGATAAGTGTGGCTACAGTAAAAGTTTATTGCTCTAAACGGCGCTAACCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTTGGCTTGTAAGTGAATaGACTTGTAAGAGAGGTAAA +
Preference number: 5 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFWLVSE*TCKRGK
Trigger: TTTACCTCTCTTACAAGTCAATTCACTTACAAGCCA...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp CTGGGATCTACACAAGGGTCTAGCTGTCTTGAATTCAATGAGGGAAAAGAAGGATGGCTTGTAAGTGAATaGACTTGTAAGAGAGGTAAA +
Preference number: 5 (lower is better)
Translates to: LGSTQGSSCLEFNEGKEGWLVSE*TCKRGK
Trigger: TTTACCTCTCTTACAAGTCAATTCACTTACAAGCCA...TCCTTCTTTTCCCTCATTGAATTCAAGACAGCTAGACCCTTGTGTAGATCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGACCACCTTGTAAATGCAGGCATGCAACCTTCATTGACAAACAGCGCACATTTGAAAGTAATGCTGGTTaGGAAAATGAGGTTGATACT +
Preference number: 5 (lower is better)
Translates to: RPPCKCRHATFIDKQRTFESNAG*ENEVDT
Trigger: AGTATCAACCTCATTTTCCAAACCAGCATTACTTTC...AAATGTGCGCTGTTTGTCAATGAAGGTTGCATGCCTGCATTTACAAGGTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATAAGGACTTGCAATGTTaGTTAAATATGGACGGCATG +
Preference number: 5 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYKDLQC*LNMDGM
Trigger: CATGCCGTCCATATTTAACAAACATTGCAAGTCCTT...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAGGTTTCTTTTTCGTGTaGTCTCCCGCTACTCACAAT +
Preference number: 5 (lower is better)
Translates to: IQILRATISNLGLYKFNKGFFFV*SPATHN
Trigger: ATTGTGAGTAGCGGGAGACAACACGAAAAAGAAACC...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAACTCACAATTCAGTTGTaGAGGAGTATCTGGTGGATA +
Preference number: 5 (lower is better)
Translates to: IQILRATISNLGLYKFNKLTIQL*RSIWWI
Trigger: TATCCACCAGATACTCCTCAACAACTGAATTGTGAG...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATTGTCTCACAATTCAGTaGTTGAGGAGTATCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AARYCLVVISHSKSLELHCLTIQ*LRSIWW
Trigger: CCACCAGATACTCCTCAACAACTGAATTGTGAGACA...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATTTAATCTTTGCAAAGTaGCCTGGTAAATGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYLIFAK*PGKCQE
Trigger: TTCTTGGCATTTACCAGGCAACTTTGCAAAGATTAA...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGTGAATGGCTGCTTCTGTTTCTAAGCTGCAGGAACAAAGCACCTCTATCATATGTAACTTGTTTTACCTaGAAGATCAGCAATTCTCAG +
Preference number: 5 (lower is better)
Translates to: SEWLLLFLSCRNKAPLSYVTCFT*KISNSQ
Trigger: CTGAGAATTGCTGATCTTCAAGGTAAAACAAGTTAC...ATATGATAGAGGTGCTTTGTTCCTGCAGCTTAGAAACAGAAGCAGCCATTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATGAGACAATCTCACTGTaGCTGTCTATGGATCTAGGA +
Preference number: 5 (lower is better)
Translates to: AARYCLVVISHSKSLELHETISL*LSMDLG
Trigger: TCCTAGATCCATAGACAGCAACAGTGAGATTGTCTC...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAATTTGGGGAAAAGCATTaGGAATCAAACTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: IQILRATISNLGLYKFNKFGEKH*ESNWEK
Trigger: CTTCTCCCAGTTTGATTCCAAATGCTTTTCCCCAAA...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp AGGAGAATCCCCTTTCCCATCCCAACAACTTGTTCTATTTTGAGATCATCATTTTCCCATCCCAACAACTaGTTCTATTTTGAGATCATC +
Preference number: 5 (lower is better)
Translates to: RRIPFPIPTTCSILRSSFSHPNN*FYFEII
Trigger: GATGATCTCAAAATAGAACAAGTTGTTGGGATGGGA...AAATGATGATCTCAAAATAGAACAAGTTGTTGGGATGGGAAAGGGGATTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000506003.5
CDS-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAATACAGTTTTCTGGATTaGGAATATCAGGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: IQILRATISNLGLYKFNKYSFLD*EYQGRR
Trigger: CCTTCTACCCTGATATTCCAAATCCAGAAAACTGTA...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAAGGAGGAATCAAAAATaGTCGGGAATTAATGGAGCA +
Preference number: 5 (lower is better)
Translates to: IQILRATISNLGLYKFNKRRNQK*SGINGA
Trigger: TGCTCCATTAATTCCCGACAATTTTTGATTCCTCCT...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp ATCCAGATACTCAGGGCCACAATCTCAAATCTAGGGCTGTATAAATTCAACAAAGTTTGGAAAATGAGGTaGATACTTCCTCTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: IQILRATISNLGLYKFNKVWKMR*ILPLLS
Trigger: GCTTAAGAGAGGAAGTATCAACCTCATTTTCCAAAC...TTTGTTGAATTTATACAGCCCTAGATTTGAGATTGTGGCCCTGAGTATCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS-3UTR CAA 90 bp GCTGCTAGATATTGCTTAGTAGTCATCTCACATAGTAAGTCACTGGAATTACATGAAAGTAATGCTGGTTaGGAAAATGAGGTTGATACT +
Preference number: 5 (lower is better)
Translates to: AARYCLVVISHSKSLELHESNAG*ENEVDT
Trigger: AGTATCAACCTCATTTTCCAAACCAGCATTACTTTC...ATGTAATTCCAGTGACTTACTATGTGAGATGACTACTAAGCAATATCTAGCAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS CAA 90 bp CTCCGCAGCCGCCGTCTCGCCTCCCCTGTGTCGGCGCGAGGCTGCTaGAGGCGGCCACGGGCGAAGGGCGGCCCGCTGCGCTCCGCGAAC +
Preference number: 6 (lower is better)
Translates to: LRSRRLASPVSARGC*RRPRAKGGPLRSAN
Trigger: GTTCGCGGAGCGCAGCGGGCCGCCCTTCGCCCGTGGCCGCCTCAAGCAGCCTCGCGCCGACACAGGGGAGGCGAGACGGCGGCTGCGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453190.7
ENST00000506990.5
CDS GCA 72 bp AGCCGCCGTCTCGCCTCCCCTGTGTCGGCGCGAGGCTaGTTGAGGCGGCCACGGGCGAAGGGCGGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: SRRLASPVSARG*LRRPRAKGGPL
Trigger: CAGCGGGCCGCCCTTCGCCCGTGGCCGCCTCAAGCAGCCTCGCGCCGACACAGGGGAGGCGAGACGGCGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453190.7
ENST00000506990.5
CDS GCA 72 bp AGGGCCGAGGCGCCGCCGCTCGCGTCCTGGTCCTCCTaGCGGGTGTGGGGCTCCCCTGCCCGAGATGGCCAG +
Preference number: 6 (lower is better)
Translates to: RAEAPPLASWSS*RVWGSPARDGQ
Trigger: CTGGCCATCTCGGGCAGGGGAGCCCCACACCCGGCAGGAGGACCAGGACGCGAGCGGCGGCGCCTCGGCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS GCA 72 bp GTCGGTACGCTCCCGCGCCGCTATCTTGCCATCCCCTaGCGCCGGCTCTGTAGCCTCGGCCGCCGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: VGTLPRRYLAIP*RRLCSLGRRPG
Trigger: CCCGGGGCGGCGGCCGAGGCTACAGAGCCGGCGGCAGGGGATGGCAAGATAGCGGCGCGGGAGCGTACCGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS GCA 72 bp CACGGTACGCTCCCGCGCCGCTATCTTGCCATCCCCTaGCGCCGGCTCTGTAGCCTCGGCCGCCGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: HGTLPRRYLAIP*RRLCSLGRRPG
Trigger: CCCGGGGCGGCGGCCGAGGCTACAGAGCCGGCGGCAGGGGATGGCAAGATAGCGGCGCGGGAGCGTACCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506990.5
CDS GCA 72 bp CGCGTCCTGGTCCTCCTGCCGGGTGTGGGGCTCCCCTaGCCGAGATGGCCAGCGGGCGCGCCGAGAGTATCC +
Preference number: 6 (lower is better)
Translates to: RVLVLLPGVGLP*PRWPAGAPRVS
Trigger: GGATACTCTCGGCGCGCCCGCTGGCCATCTCGGGCAGGGGAGCCCCACACCCGGCAGGAGGACCAGGACGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS CCA 72 bp GTCCTCCTGCCGGGTGTGGGGCTCCCCTGCCCGAGATaGCCAGCGGGCGCGCCGAGAGTATCCTGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: VLLPGVGLPCPR*PAGAPRVSWSH
Trigger: ATGGCTCCAGGATACTCTCGGCGCGCCCGCTGGCCATCTCGGGCAGGGGAGCCCCACACCCGGCAGGAGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS CAA 72 bp GCTGCTCCGATCACGGTACGCTCCCGCGCCGCTATCTaGCCATCCCCTGCCGCCGGCTCTGTAGCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: AAPITVRSRAAI*PSPAAGSVASA
Trigger: GGCCGAGGCTACAGAGCCGGCGGCAGGGGATGGCAAGATAGCGGCGCGGGAGCGTACCGTGATCGGAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506990.5
CDS CCA 72 bp TGCCCGAGATGGCCAGCGGGCGCGCCGAGAGTATCCTaGAGCCATCTAGTCTTGCCTCGGAGGCGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: CPRWPAGAPRVS*SHLVLPRRRGG
Trigger: CCCACCCCGCCTCCGAGGCAAGACTAGATGGCTCCAGGATACTCTCGGCGCGCCCGCTGGCCATCTCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS CAA 72 bp CAATGCAGTCAGTCGGTACGCTCCCGCGCCGCTATCTaGCCATCCCCTGCCGCCGGCTCTGTAGCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: QCSQSVRSRAAI*PSPAAGSVASA
Trigger: GGCCGAGGCTACAGAGCCGGCGGCAGGGGATGGCAAGATAGCGGCGCGGGAGCGTACCGACTGACTGCATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS GCA 72 bp CTTGCAAGTGCAGTTCTGCAGAGCGAAAGGGCCCGGTaGCTTGCAGCAGAGACACGTTCTGGGAGAGAGGGT +
Preference number: 6 (lower is better)
Translates to: LASAVLQSERAR*LAAETRSGREG
Trigger: ACCCTCTCTCCCAGAACGTGTCTCTGCTGCAAGGCACCGGGCCCTTTCGCTCTGCAGAACTGCACTTGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000503088.1
CDS CAA 72 bp CAAGTGCAGTTCTGCAGAGCGAAAGGGCCCGGTGCCTaGCAGCAGAGACACGTTCATAGCTCTGCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: QVQFCRAKGPGA*QQRHVHSSAGC
Trigger: ACAGCCTGCAGAGCTATGAACGTGTCTCTGCTGCAAGGCACCGGGCCCTTTCGCTCTGCAGAACTGCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507786.1
CDS CAA 90 bp ATGGTCTTGCAAGTGCAGTTCTGCAGAGCGAAAGGGCCCGGTGCCTaGCAGCAGAGACACGTTCATAGCTCTGCAGGCTGTACAGAAAAC +
Preference number: 6 (lower is better)
Translates to: MVLQVQFCRAKGPGA*QQRHVHSSAGCTEN
Trigger: GTTTTCTGTACAGCCTGCAGAGCTATGAACGTGTCTCTGCTGCAAGGCACCGGGCCCTTTCGCTCTGCAGAACTGCACTTGCAAGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507786.1
CDS TCA 72 bp AGGAGGCCTCAGGGAGCTTTTACTCATGGCAGAAGATaGAACAGGGGCAGGCCACAAGAATCTCCTGGTTGC +
Preference number: 6 (lower is better)
Translates to: RRPQGAFTHGRR*NRGRPQESPGC
Trigger: GCAACCAGGAGATTCTTGTGGCCTGCCCCTGTTTCATCTTCTGCCATGAGTAAAAGCTCCCTGAGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507786.1
CDS GCA 72 bp TGGACAATAGGACACAACCACATGGTTTTCAGGCTCTaGATCAGAGCGATCTTCAGGACGCTCAGCTACTGG +
Preference number: 6 (lower is better)
Translates to: WTIGHNHMVFRL*IRAIFRTLSYW
Trigger: CCAGTAGCTGAGCGTCCTGAAGATCGCTCTGATGCAGAGCCTGAAAACCATGTGGTTGTGTCCTATTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS GCA 72 bp TGGTCGTTTCAAACATACGTAAATATCCATCATCTGTaGAATGCAGTCAGTCGGTACGCTCCCGCGCCGCTA +
Preference number: 6 (lower is better)
Translates to: WSFQTYVNIHHL*NAVSRYAPAPL
Trigger: TAGCGGCGCGGGAGCGTACCGACTGACTGCATTGCACAGATGATGGATATTTACGTATGTTTGAAACGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453190.7
CDS CCA 72 bp AATAACCTGTGCAGTCCCTCCAGCTTCATCTGCGGCTaGGTTTGGTATTTCTTCCTCAATGATGGGTGGACA +
Preference number: 6 (lower is better)
Translates to: NNLCSPSSFICG*VWYFFLNDGWT
Trigger: TGTCCACCCATCATTGAGGAAGAAATACCAAACCCAGCCGCAGATGAAGCTGGAGGGACTGCACAGGTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS TCA 72 bp GGGTCTCTAAACAAGGGCTGGTATCGTTACAGAGACTaGAGACTGAGGAAGACCATCTCTGTAGGATGCCAA +
Preference number: 6 (lower is better)
Translates to: GSLNKGWYRYRD*RLRKTISVGCQ
Trigger: TTGGCATCCTACAGAGATGGTCTTCCTCAGTCTTCAGTCTCTGTAACGATACCAGCCCTTGTTTAGAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507786.1
CDS GCA 72 bp CTGATACATCGACTGAACATCAATGTAAATAACCTGTaGAGTCCCTCCAGCTTCATCTGCGGCTGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: LIHRLNINVNNL*SPSSFICGWVW
Trigger: CCAAACCCAGCCGCAGATGAAGCTGGAGGGACTGCACAGGTTATTTACATTGATGTTCAGTCGATGTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS CCA 72 bp TGCGGCTGGGTTTGGTATTTCTTCCTCAATGATGGGTaGACAATAGGACACAACCACATGGTTTTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: CGWVWYFFLNDG*TIGHNHMVFRL
Trigger: GAGCCTGAAAACCATGTGGTTGTGTCCTATTGTCCACCCATCATTGAGGAAGAAATACCAAACCCAGCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS CAA 90 bp ACCACGGCCTGTTCCAGAGGGTGCTTTCCAAGAACAGTTCCACACTaGCAAATTGTTAGTTACACACTTCAAATCATGAGGAGCCCCCTT +
Preference number: 6 (lower is better)
Translates to: TTACSRGCFPRTVPH*QIVSYTLQIMRSPL
Trigger: AAGGGGGCTCCTCATGATTTGAAGTGTGTAACTAACAATTTGCAAGTGTGGAACTGTTCTTGGAAAGCACCCTCTGGAACAGGCCGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
ENST00000506990.5
ENST00000512723.1
CDS GCA 72 bp AATGTAAATAACCTGTGCAGTCCCTCCAGCTTCATCTaGGGCTGGGTTTGGTATTTCTTCCTCAATGATGGG +
Preference number: 6 (lower is better)
Translates to: NVNNLCSPSSFI*GWVWYFFLNDG
Trigger: CCCATCATTGAGGAAGAAATACCAAACCCAGCCGCAGATGAAGCTGGAGGGACTGCACAGGTTATTTACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS GCA 72 bp AGAATTAATGGGGAGGTGCATCTGTGGCTTATAGCCTaGCCCTCCTACAGGGTCATTTTCTTGTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RINGEVHLWLIA*PSYRVIFLFFF
Trigger: GAAGAAGAACAAGAAAATGACCCTGTAGGAGGGGCAGGCTATAAGCCACAGATGCACCTCCCCATTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263409.8
ENST00000453190.7
CDS CAA 72 bp GGATCTCTTAATGGGGTGAGATTTTTCCTCCGTACATaGTTCCCATTTCCGCAGTTTCACTTGGCCTCGGTT +
Preference number: 6 (lower is better)
Translates to: GSLNGVRFFLRT*FPFPQFHLASV
Trigger: AACCGAGGCCAAGTGAAACTGCGGAAATGGGAACAATGTACGGAGGAAAAATCTCACCCCATTAAGAGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS TCA 72 bp TTCCACAAAATGAATGGCACATTCCAAGGGCATATCTaGGGCCCAACTCCAGTGATGAAGTGTATCTTTGCC +
Preference number: 6 (lower is better)
Translates to: FHKMNGTFQGHI*GPTPVMKCIFA
Trigger: GGCAAAGATACACTTCATCACTGGAGTTGGGCCTCAGATATGCCCTTGGAATGTGCCATTCATTTTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
CDS TCA 72 bp GCACCTGGCAGATTCTATTACAGTTTCAGTGCTGTTTaGGGGAACTTTTCTCCAGTCCATAAGGCATGGTTC +
Preference number: 6 (lower is better)
Translates to: APGRFYYSFSAV*GNFSPVHKAWF
Trigger: GAACCATGCCTTATGGACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCTGCCAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503088.1
CDS TCA 72 bp TATTTGTGCGGAGAAGAAACGGATCTCTTAATGGGGTaGGATTTTTCCTCCGTACATTGTTCCCATTTCCGC +
Preference number: 6 (lower is better)
Translates to: YLCGEETDLLMG*DFSSVHCSHFR
Trigger: GCGGAAATGGGAACAATGTACGGAGGAAAAATCTCACCCCATTAAGAGATCCGTTTCTTCTCCGCACAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS GCA 72 bp AACTTCATAATCAGTACCACGGCCTGTTCCAGAGGGTaGTTTCCAAGAACAGTTCCACACTTGCAAATTGTT +
Preference number: 6 (lower is better)
Translates to: NFIISTTACSRG*FPRTVPHLQIV
Trigger: AACAATTTGCAAGTGTGGAACTGTTCTTGGAAAGCACCCTCTGGAACAGGCCGTGGTACTGATTATGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
ENST00000506990.5
ENST00000512723.1
CDS CAA 72 bp CACCATCTGTATAGGCTCGCAAGACCAGGTGGTAACTaGTTTTACCTTGAAGATCAGCAATTCTCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: HHLYRLARPGGN*FYLEDQQFSVS
Trigger: AGACACTGAGAATTGCTGATCTTCAAGGTAAAACAAGTTACCACCTGGTCTTGCGAGCCTATACAGATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000508477.5
CDS CAA 72 bp CAGAGTAATCACCAAATGAAATTAGCTGGAGAGCGTTaGATGGCGCAGAATCACGGTCTGAAGATGTTTACG +
Preference number: 6 (lower is better)
Translates to: QSNHQMKLAGER*MAQNHGLKMFT
Trigger: CGTAAACATCTTCAGACCGTGATTCTGCGCCATCAAACGCTCTCCAGCTAATTTCATTTGGTGATTACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511561.1
CDS GCA 72 bp GCTGATGATGTAGTCATTCTTATCAAGTCGTATCTCTaGTTTGTGCTGAGGATCAGGGATTTCAGAAAGGGA +
Preference number: 6 (lower is better)
Translates to: ADDVVILIKSYL*FVLRIRDFRKG
Trigger: TCCCTTTCTGAAATCCCTGATCCTCAGCACAAAGCAGAGATACGACTTGATAAGAATGACTACATCATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
ENST00000506003.5
CDS CCA 72 bp TTAGAGACTTTGGAGATACTCAAACTCAAGCTTCCCTaGCTTGTGGAGACATCAATAATTGGACACAGCTGT +
Preference number: 6 (lower is better)
Translates to: LETLEILKLKLP*LVETSIIGHSC
Trigger: ACAGCTGTGTCCAATTATTGATGTCTCCACAAGCCAGGGAAGCTTGAGTTTGAGTATCTCCAAAGTCTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512723.1
CDS CAA 72 bp AGCCACTGGAAATTTGAAGCAGTCCTCATTCTTTTATaGTCCACCATCCAGGATGGTCGTTTCAAACATACG +
Preference number: 6 (lower is better)
Translates to: SHWKFEAVLILL*STIQDGRFKHT
Trigger: CGTATGTTTGAAACGACCATCCTGGATGGTGGACAATAAAAGAATGAGGACTGCTTCAAATTTCCAGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
ENST00000506990.5
ENST00000511561.1
ENST00000512723.1
CDS GCA 72 bp TATCTGAGGCCCAACTCCAGTGATGAAGTGTATCTTTaGCATTCAGAGTTGTGTTGTGGGTCACTAATTTTA +
Preference number: 6 (lower is better)
Translates to: YLRPNSSDEVYL*HSELCCGSLIL
Trigger: TAAAATTAGTGACCCACAACACAACTCTGAATGGCAAAGATACACTTCATCACTGGAGTTGGGCCTCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
CDS CAA 72 bp TGTTCCAGAGGGTGCTTTCCAAGAACAGTTCCACACTaGCAAATTGTTAGTTACACACTTCAAATCATGAGG +
Preference number: 6 (lower is better)
Translates to: CSRGCFPRTVPH*QIVSYTLQIMR
Trigger: CCTCATGATTTGAAGTGTGTAACTAACAATTTGCAAGTGTGGAACTGTTCTTGGAAAGCACCCTCTGGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
ENST00000506990.5
ENST00000511561.1
ENST00000512723.1
CDS CAA 72 bp AACTCCAGTGATGAAGTGTATCTTTGCCATTCAGAGTaGTGTTGTGGGTCACTAATTTTACGAGCTCCATAC +
Preference number: 6 (lower is better)
Translates to: NSSDEVYLCHSE*CCGSLILRAPY
Trigger: GTATGGAGCTCGTAAAATTAGTGACCCACAACACAACTCTGAATGGCAAAGATACACTTCATCACTGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
CDS CAA 90 bp TGTTCTATTTTGAGATCATCATTTGGAATTTCCATACTCGCTATTTaGGAAGGTGGTGATGAGCCCACAGAATTTTTAGCCACTACGCTG +
Preference number: 6 (lower is better)
Translates to: CSILRSSFGISILAI*EGGDEPTEFLATTL
Trigger: CAGCGTAGTGGCTAAAAATTCTGTGGGCTCATCACCACCTTCCAAAATAGCGAGTATGGAAATTCCAAATGATGATCTCAAAATAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
ENST00000506003.5
CDS GCA 72 bp TGGCTTGTGGAGACATCAATAATTGGACACAGCTGTTaGTTTAGGTATCTACTACGAGGCCAATTTTCAAAT +
Preference number: 6 (lower is better)
Translates to: WLVETSIIGHSC*FRYLLRGQFSN
Trigger: ATTTGAAAATTGGCCTCGTAGTAGATACCTAAAGCAACAGCTGTGTCCAATTATTGATGTCTCCACAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512723.1
CDS CCA 72 bp AGCAGTCCTCATTCTTTTATTGTCCACCATCCAGGATaGTCGTTTCAAACATACGTAAATATCCATCATCTG +
Preference number: 6 (lower is better)
Translates to: SSPHSFIVHHPG*SFQTYVNIHHL
Trigger: CAGATGATGGATATTTACGTATGTTTGAAACGACCATCCTGGATGGTGGACAATAAAAGAATGAGGACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
ENST00000506990.5
ENST00000511561.1
ENST00000512723.1
CDS TCA 72 bp TTTGTATGGCCAATCAGTGCTGATAACACTTTTTCTTaGCTCACACAACAAAATGTTATGTCTGAGCCTACA +
Preference number: 6 (lower is better)
Translates to: FVWPISADNTFS*LTQQNVMSEPT
Trigger: TGTAGGCTCAGACATAACATTTTGTTGTGTGAGTCAAGAAAAAGTGTTATCAGCACTGATTGGCCATACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
CDS TCA 72 bp TTCCACTACTTGCAGAAACAGAAATATTACGAATCTTaGTTGCAACATTTTCCCCATCAAGATGGATCAAGG +
Preference number: 6 (lower is better)
Translates to: FHYLQKQKYYES*LQHFPHQDGSR
Trigger: CCTTGATCCATCTTGATGGGGAAAATGTTGCAATCAAGATTCGTAATATTTCTGTTTCTGCAAGTAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
CDS GCA 72 bp TGGTCGTTTCAAACATACGTAAATATCCATCATCTGTaGAATGCAGTCAGTCCTATTACAAAGCAAAGAAGT +
Preference number: 6 (lower is better)
Translates to: WSFQTYVNIHHL*NAVSPITKQRS
Trigger: ACTTCTTTGCTTTGTAATAGGACTGACTGCATTGCACAGATGATGGATATTTACGTATGTTTGAAACGACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506990.5
CDS TCA 72 bp ATTTCTTTTAAATCATGTGTCTCACAATTCAGTTGTTaGGGAGTATCTGGTGGATATCCAGCAAAAATAACG +
Preference number: 6 (lower is better)
Translates to: ISFKSCVSQFSC*GVSGGYPAKIT
Trigger: CGTTATTTTTGCTGGATATCCACCAGATACTCCTCAACAACTGAATTGTGAGACACATGATTTAAAAGAAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263409.8
ENST00000453190.7
ENST00000503088.1
CDS TCA 72 bp ACCTTATACTGTGCACACAAACACTCAAATAGATTCTaGCAGATTCTGAAACACTGTACATTTAGAGACTTT +
Preference number: 6 (lower is better)
Translates to: TLYCAHKHSNRF*QILKHCTFRDF
Trigger: AAAGTCTCTAAATGTACAGTGTTTCAGAATCTGTCAGAATCTATTTGAGTGTTTGTGTGCACAGTATAAGGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512723.1