Pregenerated sensors for LHX8 (Homo sapiens)
Ensembl gene IDs: ENSG00000162624Ensembl transcript IDs: ENST00000294638.9, ENST00000356261.3, ENST00000356261.4
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAGATACACACTAGAGTaGACTATTTCCAGACAATAC | + |
|
Preference number: 2 (lower is better) Translates to: INHKHNNVFAWHATTEALRYTLE*TISRQY Trigger: GTATTGTCTGGAAATAGTTCACTCTAGTGTGTATCT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAAACATTTTGCACACTaGTCAGTCCTTTCTTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: INHKHNNVFAWHATTEALKHFAH*SVLSFR Trigger: CCTAAAAGAAAGGACTGACAAGTGTGCAAAATGTTT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.3 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACCAGCTGGGCAAGCCTaGTCCACGCGGGACACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALPAGQA*STRDTR Trigger: CCGGGTGTCCCGCGTGGAGCAGGCTTGCCCAGCTGG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACTTCCCCGGCGCCTTTaGGAGTCCTCCCGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALLPRRL*ESSRPP Trigger: TGGCGGCCGGGAGGACTCGCAAAGGCGCCGGGGAAG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACCGCCCGCACTCCTCTaGCATGAGCCCCTGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALPPALL*HEPLTP Trigger: AGGTGTCAGGGGCTCATGTCAGAGGAGTGCGGGCGG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACACCCGGGAATCCACTaGCGGGCAGACCCTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALHPGIH*RADPAF Trigger: GAAGGCAGGGTCTGCCCGCCAGTGGATTCCCGGGTG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGATGGGCTTCCCAGCTaGGCAAGCCTGCTCCACGCG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALDGLPS*ASLLHA Trigger: CGCGTGGAGCAGGCTTGCCCAGCTGGGAAGCCCATC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGCGAGGGCCTCCGTCTaGGACCCACTGGTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALARASV*DPLVSL Trigger: GAGAGAGACCAGTGGGTCCCAGACGGAGGCCCTCGC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACGCGGCATTCCTCACTaGGGTCTGATGCGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALRGIPH*GLMRQL Trigger: CAGCTGGCGCATCAGACCGCAGTGAGGAATGCCGCG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACCGTCTGGGACCCACTaGTCTCTCTCCCACTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALPSGTH*SLSHCG Trigger: CCCACAGTGGGAGAGAGACCAGTGGGTCCCAGACGG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGCCAAGACTGAGGTTTaGTGGGCTTCCCAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALAKTEV*WASQLG Trigger: GCCCAGCTGGGAAGCCCATCAAACCTCAGTCTTGGC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACGCACTCCTCTGACATaGGCCCCTGACACCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALRTPLT*APDTCS Trigger: TGAGCAGGTGTCAGGGGCTCATGTCAGAGGAGTGCG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAGGGTGGGACTGCTGTaGCTGGGGTGGAGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALRVGLL*LGWRMS Trigger: ACTCATCCTCCACCCCAGTCACAGCAGTCCCACCCT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACCAGGCCGCAACTGTTaGACACACACTTGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALPGRNC*THTCQE Trigger: CTCCTGGCAAGTGTGTGTGCAACAGTTGCGGCCTGG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAACTGTGGGCCAAGACTaGGGTTTGATGGGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALTVGQD*GLMGFP Trigger: TGGGAAGCCCATCAAACCTCAGTCTTGGCCCACAGT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGACTGGGGTGGAGGATaGGTGATTAGGACTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALDWGGG*VIRTDV Trigger: CACGTCAGTCCTAATCACTCATCCTCCACCCCAGTC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATATACGGGCTCACCTTaGGACTTACCGGTCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALYTGSP*DLPVPD Trigger: GTCTGGGACCGGTAAGTCCCAAGGTGAGCCCGTATA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGATAGACATTCCCCTTaGCTCTCCGGACCCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALDRHSP*LSGPSQ Trigger: CTGACTGGGTCCGGAGAGCCAAGGGGAATGTCTATC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGGGGTGGAGGATGAGTaGTTAGGACTGACGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALGVEDE*LGLTCF Trigger: GAAACACGTCAGTCCTAATCACTCATCCTCCACCCC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGAGAGACACCGGACATaGCAGCATAGGTCATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALERHRT*QHRSFT Trigger: GGTGAATGACCTATGCTGGCATGTCCGGTGTCTCTC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATTTTATTCACGCCAGTaGAGGTCGCCAAAAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALFYSRQ*RSPKAG Trigger: GCCCGCTTTTGGCGACCTCCACTGGCGTGAATAAAA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAGGGTAAGAGAGGGGTaGTTTTATTCACGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALRVREG*FYSRQW Trigger: CCACTGGCGTGAATAAAAGCACCCCTCTCTTACCCT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAGGTTCTGCAAACACTaGAGGAGAGACACCGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALRFCKH*RRDTGH Trigger: ATGTCCGGTGTCTCTCCTGCAGTGTTTGCAGAACCT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGGATGGTTAACATCTTaGTCTGTGAGGAGGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALGWLTS*SVRRAP Trigger: AGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAACCTGAAGCTGATCTaGTGTAAAGCTGGTCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALNLKLI*CKAGPS Trigger: GCTCGGACCAGCTTTACAGCAGATCAGCTTCAGGTT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACCTGTATCACACGTCTaGTCAAGCCTGTCCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALPVSHV*SSLSFL Trigger: CAGAAAGGACAGGCTTGAGCAGACGTGTGATACAGG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAATAACCCCTCAGAGATaGCAGAGCTGTATACGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALITPQR*QSCIRA Trigger: AGCCCGTATACAGCTCTGCCATCTCTGAGGGGTTAT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATGGGGTAACAAGGGCTaGAGTCCAAGAGTTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALWGNKG*SPRVVG Trigger: ACCAACAACTCTTGGACTCCAGCCCTTGTTACCCCA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAAGAGTCTGTACGAGTaGCTCGGTGTTTCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALKSLYE*LGVSFQ Trigger: CTGGAAAGAAACACCGAGTCACTCGTACAGACTCTT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATTTCTGGAGTGTCTGTaGATCTGGGTTGTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALFLECL*IWVVVL Trigger: CAGGACAACAACCCAGATGCACAGACACTCCAGAAA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACAAGCCTGTCCTTTCTaGCAATTTCTGGAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALQACPF*QFLECL Trigger: CAGACACTCCAGAAATTGGCAGAAAGGACAGGCTTG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATGTTTCAAGCGGTTCTaGAGGACCAATAGCGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALCFKRF*RTNSGK Trigger: CTTTCCGCTATTGGTCCTCCAGAACCGCTTGAAACA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATCTGGGTTGTTGTCCTaGGCAAATTGTGCTTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALSGLLS*ANCACI Trigger: TATGCAAGCACAATTTGCTCAGGACAACAACCCAGA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACGTGCTCTACAATTCTaGAACCACACCTGTATCACA | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALRALQF*NHTCIT Trigger: TGTGATACAGGTGTGGTTTCAGAATTGTAGAGCACG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGACGTCCGACGCGAATaGCTGACTTTTAACTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALDVRRE*LTFNYF Trigger: AAAGTAGTTAAAAGTCAGGCATTCGCGTCGGACGTC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAAAGCAGGCAAAGCATaGCAAGTGATAGACATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALKAGKA*QVIDIP Trigger: GGGAATGTCTATCACTTGGCATGCTTTGCCTGCTTT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATGGAAAGTTGCCTTTTaGAGGAAAAGCAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALWKVAF*RKSRQS Trigger: GCTTTGCCTGCTTTTCCTGCAAAAGGCAACTTTCCA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATCTCCTGTGGAAAGTTaGCTTTTGCAGGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALSPVES*LLQEKQ Trigger: CTGCTTTTCCTGCAAAAGGCAACTTTCCACAGGAGA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGGTCCGAGCTCTTTTTaGTGGTTTTGGATGGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALGPSSF*WFWMVN Trigger: GTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGTCCTGAGCAAATTGTaGTTGCATAACCTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALVLSKL*LHNLKL Trigger: CAGCTTCAGGTTATGCAAGCACAATTTGCTCAGGAC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAGTTGTGTCATTGAATaGGGTAACAAGGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALSCVIE*GNKGWS Trigger: ACTCCAGCCCTTGTTACCCCATTCAATGACACAACT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATTGTCCTCTTTAGGGTaGGTTCAGAAATGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALLSSLG*VQKWTL Trigger: AAGTGTCCATTTCTGAACTCACCCTAAAGAGGACAA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAATAGGTCATTCACCTTaGGAAGGTATTTGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALIGHSP*EGICPR Trigger: TCGTGGACAAATACCTTCTCAAGGTGAATGACCTAT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGTGTTTCTTGTGGCGTaGTCTACAATTCTGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALVFLVA*STILKP Trigger: TGGTTTCAGAATTGTAGAGCACGCCACAAGAAACAC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACCGAGCTCTTTTTGCTaGTTTTGGATGGTTAACATC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALPSSFC*FWMVNI Trigger: GATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATCCAAGAGTTGTTGGTaGATGAGCATCCATATAACT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALSKSCW*MSIHIT Trigger: AGTTATATGGATGCTCATTCACCAACAACTCTTGGA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAGTCATAATGTACTCTaGAGAGGACTTTCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALSHNVL*RGLSLP Trigger: TGGAAGAGAAAGTCCTCTGCAGAGTACATTATGACT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATTTGCTGGTTTTGGATaGTTAACATCTTGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALFAGFG*LTSCSV Trigger: CACAGAGCAAGATGTTAACCATCCAAAACCAGCAAA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR TCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGAGTTCCATACCTTCTaGAATAATCAAGTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALEFHTF*NNQVCR Trigger: TCTGCAAACTTGATTATTTCAGAAGGTATGGAACTC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATGTGTTTGCATGGCATaGTACAACAGAAGCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALCVCMA*YNRSFI Trigger: AATAAAGCTTCTGTTGTAGCATGCCATGCAAACACA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATCTTTTTGCTGGTTTTaGATGGTTAACATCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALSFCWF*MVNILL Trigger: GAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR GCA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATTAAATTATCCAGCATaGAGTCATAATGTACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: INHKHNNVFAWHATTEALLNYPA*SHNVLC Trigger: GCAGAGTACATTATGACTGCATGCTGGATAATTTAA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CCA 90 bp | CCCAGCTGGGCAAGCCTGCTCCACGCGGGACACCCGGGAATCCACTaGCGGGCAGACCCTGCCTTCGCCACCCGCCCCGCGGCATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSWASLLHAGHPGIH*RADPAFATRPAAFL Trigger: GAGGAATGCCGCGGGGCGGGTGGCGAAGGCAGGGTCTGCCCGCCAGTGGATTCCCGGGTGTCCCGCGTGGAGCAGGCTTGCCCAGCTGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS GCA 90 bp | CCTGCTCCACGCGGGACACCCGGGAATCCACTGGCGGGCAGACCCTaGCTTCGCCACCCGCCCCGCGGCATTCCTCACTGCGGTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PAPRGTPGNPLAGRP*LRHPPRGIPHCGLM Trigger: CATCAGACCGCAGTGAGGAATGCCGCGGGGCGGGTGGCGAAGGCAGGGTCTGCCCGCCAGTGGATTCCCGGGTGTCCCGCGTGGAGCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS GCA 90 bp | GCGGGCAGACCCTGCCTTCGCCACCCGCCCCGCGGCATTCCTCACTaGGGTCTGATGCGCCAGCTGGGGCCAGTTGTTTCAAGCGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGRPCLRHPPRGIPH*GLMRQLGPVVSSGS Trigger: AGAACCGCTTGAAACAACTGGCCCCAGCTGGCGCATCAGACCGCAGTGAGGAATGCCGCGGGGCGGGTGGCGAAGGCAGGGTCTGCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS TCA 90 bp | GACCCTGCCTTCGCCACCCGCCCCGCGGCATTCCTCACTGCGGTCTaGTGCGCCAGCTGGGGCCAGTTGTTTCAAGCGGTTCTGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: DPAFATRPAAFLTAV*CASWGQLFQAVLED Trigger: GTCCTCCAGAACCGCTTGAAACAACTGGCCCCAGCTGGCGCATCAGACCGCAGTGAGGAATGCCGCGGGGCGGGTGGCGAAGGCAGGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS GCA 90 bp | GGTATTTGTCCACGATCTCCAGGCCGCAACTGTTGCACACACACTTaGCAGGAGGGCAGCCGGAGCCCGAGGCCATGGACCGGGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GICPRSPGRNCCTHT*QEGSRSPRPWTGAR Trigger: CCTCGCCCCGGTCCATGGCCTCGGGCTCCGGCTGCCCTCCTGGCAAGTGTGTGTGCAACAGTTGCGGCCTGGAGATCGTGGACAAATACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS CCA 90 bp | CTCTCCCACTGTGGGCCAAGACTGAGGTTTGATGGGCTTCCCAGCTaGGCAAGCCTGCTCCACGCGGGACACCCGGGAATCCACTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSHCGPRLRFDGLPS*ASLLHAGHPGIHWR Trigger: CCGCCAGTGGATTCCCGGGTGTCCCGCGTGGAGCAGGCTTGCCCAGCTGGGAAGCCCATCAAACCTCAGTCTTGGCCCACAGTGGGAGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS TCA 90 bp | TGGGACCCACTGGTCTCTCTCCCACTGTGGGCCAAGACTGAGGTTTaGTGGGCTTCCCAGCTGGGCAAGCCTGCTCCACGCGGGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: WDPLVSLPLWAKTEV*WASQLGKPAPRGTP Trigger: GGGTGTCCCGCGTGGAGCAGGCTTGCCCAGCTGGGAAGCCCATCAAACCTCAGTCTTGGCCCACAGTGGGAGAGAGACCAGTGGGTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS TCA 90 bp | CTCCGTCTGGGACCCACTGGTCTCTCTCCCACTGTGGGCCAAGACTaGGGTTTGATGGGCTTCCCAGCTGGGCAAGCCTGCTCCACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLGPTGLSPTVGQD*GLMGFPAGQACSTR Trigger: CCGCGTGGAGCAGGCTTGCCCAGCTGGGAAGCCCATCAAACCTCAGTCTTGGCCCACAGTGGGAGAGAGACCAGTGGGTCCCAGACGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CCA 90 bp | ATTCACGCCAGTGGAGGTCGCCAAAAGCGGGCGAGGGCCTCCGTCTaGGACCCACTGGTCTCTCTCCCACTGTGGGCCAAGACTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IHASGGRQKRARASV*DPLVSLPLWAKTEV Trigger: AACCTCAGTCTTGGCCCACAGTGGGAGAGAGACCAGTGGGTCCCAGACGGAGGCCCTCGCCCGCTTTTGGCGACCTCCACTGGCGTGAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CCA 90 bp | AGCCCAAACAACTCGAGTTTCAAGGACACTGCGATTCAGCTGGTCTaGCCAGGCGTCGGCTCGCTCACCTTCTCAGGGGGAACTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPNNSSFKDTAIQLV*PGVGSLTFSGGTAS Trigger: GCTGGCAGTTCCCCCTGAGAAGGTGAGCGAGCCGACGCCTGGCCAGACCAGCTGAATCGCAGTGTCCTTGAAACTCGAGTTGTTTGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS CCA 90 bp | CTGCGGTCTGATGCGCCAGCTGGGGCCAGTTGTTTCAAGCGGTTCTaGAGGACCAATAGCGGAAAGCCAAGTTCTGCGACCAAGAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRSDAPAGASCFKRF*RTNSGKPSSATKSL Trigger: CAGACTCTTGGTCGCAGAACTTGGCTTTCCGCTATTGGTCCTCCAGAACCGCTTGAAACAACTGGCCCCAGCTGGCGCATCAGACCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CCA 90 bp | TTAGGAGCCCAAACAACTCGAGTTTCAAGGACACTGCGATTCAGCTaGTCTGGCCAGGCGTCGGCTCGCTCACCTTCTCAGGGGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LGAQTTRVSRTLRFS*SGQASARSPSQGEL Trigger: CAGTTCCCCCTGAGAAGGTGAGCGAGCCGACGCCTGGCCAGACCAGCTGAATCGCAGTGTCCTTGAAACTCGAGTTGTTTGGGCTCCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS TCA 90 bp | ACCAATAGCGGAAAGCCAAGTTCTGCGACCAAGAGTCTGTACGAGTaGCTCGGTGTTTCTTTCCAGCCGGTTCGCAGAGCGCCAGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TNSGKPSSATKSLYE*LGVSFQPVRRAPVS Trigger: GCTTACTGGCGCTCTGCGAACCGGCTGGAAAGAAACACCGAGTCACTCGTACAGACTCTTGGTCGCAGAACTTGGCTTTCCGCTATTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CCA 90 bp | CTGCATAACCCCTCAGAGATGGCAGAGCTGTATACGGGCTCACCTTaGGACTTACCGGTCCCAGACTCCGTTTTATACCTTGCTACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHNPSEMAELYTGSP*DLPVPDSVLYLATH Trigger: GTGGGTAGCAAGGTATAAAACGGAGTCTGGGACCGGTAAGTCCCAAGGTGAGCCCGTATACAGCTCTGCCATCTCTGAGGGGTTATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATCTTCCCCGGCGCCTTaGCGAGTCCTCCCGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALSSPAP*RVLPAA Trigger: GGCGGCCGGGAGGACTCGCAAAGGCGCCGGGGAAGA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS GCA 90 bp | CCAGTCAAGCCAGGGCAGAATTCAAACCCAGACGTCCGACGCGAATaGCTGACTTTTAACTACTTTGCGGTGTTTGTCCTCTTTAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVKPGQNSNPDVRRE*LTFNYFAVFVLFRV Trigger: CACCCTAAAGAGGACAAACACCGCAAAGTAGTTAAAAGTCAGGCATTCGCGTCGGACGTCTGGGTTTGAATTCTGCCCTGGCTTGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS TCA 90 bp | GCCAGCTCCGGCACGTCCTTTGCTACTAGTTTACACACAAACATCTaGTCGTTCTTCCAATACATGGCACTGCTAGGGCTGCTTATCACA | + |
|
Preference number: 5 (lower is better) Translates to: ASSGTSFATSLHTNI*SFFQYMALLGLLIT Trigger: TGTGATAAGCAGCCCTAGCAGTGCCATGTATTGGAAGAACGATCAGATGTTTGTGTGTAAACTAGTAGCAAAGGACGTGCCGGAGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS GCA 90 bp | CATAACCTGAAGCTGATCTGCTGTAAAGCTGGTCCGAGCTCTTTTTaGTGGTTTTGGATGGTTAACATCTTGCTCTGTGAGGAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HNLKLICCKAGPSSF*WFWMVNILLCEEGT Trigger: GGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTTACAGCAGATCAGCTTCAGGTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS CCA 90 bp | AAGCTGATCTGCTGTAAAGCTGGTCCGAGCTCTTTTTGCTGGTTTTaGATGGTTAACATCTTGCTCTGTGAGGAGGGCACCTTCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: KLICCKAGPSSFCWF*MVNILLCEEGTFHT Trigger: AGTGTGGAAGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTTACAGCAGATCAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS CCA 90 bp | AACCTGAAGCTGATCTGCTGTAAAGCTGGTCCGAGCTCTTTTTGCTaGTTTTGGATGGTTAACATCTTGCTCTGTGAGGAGGGCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLKLICCKAGPSSFC*FWMVNILLCEEGTF Trigger: GAAGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTTACAGCAGATCAGCTTCAGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS GCA 90 bp | AAGCTGGTCCGAGCTCTTTTTGCTGGTTTTGGATGGTTAACATCTTaGTCTGTGAGGAGGGCACCTTCCACACTAATCCCATTCCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: KLVRALFAGFGWLTS*SVRRAPSTLIPFPF Trigger: AAATGGGAATGGGATTAGTGTGGAAGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS TCA 90 bp | GATAATGCTACAAGTGTGTCTTCGTCCAAAGAGGCCGCTGTGGCCTaGCCACTTTCTGATGAACCGTTCTTAAAATTCCTTTCCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DNATSVSSSKEAAVA*PLSDEPFLKFLSQL Trigger: AAGCTGGGAAAGGAATTTTAAGAACGGTTCATCAGAAAGTGGTCAGGCCACAGCGGCCTCTTTGGACGAAGACACACTTGTAGCATTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGCCAGCTGGGGCCAGTaGTTTCAAGCGGTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALASWGQ*FQAVLE Trigger: CTCCAGAACCGCTTGAAACAACTGGCCCCAGCTGGC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGTATACGGGCTCACCTaGGGACTTACCGGTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALVYGLT*GLTGPR Trigger: TCTGGGACCGGTAAGTCCCAAGGTGAGCCCGTATAC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATCCAGGCCGCAACTGTaGCACACACACTTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALSRPQL*HTHLPG Trigger: TCCTGGCAAGTGTGTGTGCAACAGTTGCGGCCTGGA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAACCTTGAGAAGGTATTaGTCCACGATCTCCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALTLRRY*STISRP Trigger: CGGCCTGGAGATCGTGGACAAATACCTTCTCAAGGT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTATGGATGGTTAACATCTaGCTCTGTGAGGAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALWMVNI*LCEEGT Trigger: GGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCA...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS GCA 90 bp | CTACTTCTCTTTTTAAATTATCCAGCATGCAGTCATAATGTACTCTaGAGAGGACTTTCTCTTCCACCAAAGCAAACTCCTCTCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFLNYPACSHNVL*RGLSLPPKQTPLLW Trigger: CCACAGGAGAGGAGTTTGCTTTGGTGGAAGAGAAAGTCCTCTGCAGAGTACATTATGACTGCATGCTGGATAATTTAAAAAGAGAAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGGACTGACGTGTTTCTaGTGGCGTGCTCTACAATTC | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALGLTCF*WRALQF Trigger: GAATTGTAGAGCACGCCACAAGAAACACGTCAGTCC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGCTGGAGTCCAAGAGTaGTTGGTGAATGAGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALAGVQE*LVNEHP Trigger: TGGATGCTCATTCACCAACAACTCTTGGACTCCAGC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGTGGAAAGTTGCCTTTaGCAGGAAAAGCAGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALVESCL*QEKQAK Trigger: CTTTGCCTGCTTTTCCTGCAAAAGGCAACTTTCCAC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAACTCCGTTTTATACCTaGCTACCCACAGTTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALTPFYT*LPTVSE Trigger: CTCAGAAACTGTGGGTAGCAAGGTATAAAACGGAGT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTACATAGGTCATTCACCTaGAGAAGGTATTTGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALHRSFT*RRYLST Trigger: CGTGGACAAATACCTTCTCAAGGTGAATGACCTATG...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAGGAGTCCAAGAGTTGTaGGTGAATGAGCATCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALGVQEL*VNEHPY Trigger: ATATGGATGCTCATTCACCAACAACTCTTGGACTCC...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS-3UTR CAA 90 bp | ATCAACCACAAACACAATAATGTGTTTGCATGGCATGCTACAACAGAAGCTTTAAACACAATAATGTGTTaGCATGGCATGCTACAACAG | + |
|
Preference number: 5 (lower is better) Translates to: INHKHNNVFAWHATTEALNTIMC*HGMLQQ Trigger: CTGTTGTAGCATGCCATGCAAACACATTATTGTGTT...TAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CCA 72 bp | GCAAGCCTGCTCCACGCGGGACACCCGGGAATCCACTaGCGGGCAGACCCTGCCTTCGCCACCCGCCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ASLLHAGHPGIH*RADPAFATRPA Trigger: CGCGGGGCGGGTGGCGAAGGCAGGGTCTGCCCGCCAGTGGATTCCCGGGTGTCCCGCGTGGAGCAGGCTTGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS GCA 72 bp | CGCGGGACACCCGGGAATCCACTGGCGGGCAGACCCTaGCTTCGCCACCCGCCCCGCGGCATTCCTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RGTPGNPLAGRP*LRHPPRGIPHC Trigger: GCAGTGAGGAATGCCGCGGGGCGGGTGGCGAAGGCAGGGTCTGCCCGCCAGTGGATTCCCGGGTGTCCCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CAA 72 bp | CCCTCGGGGCTCACCAGTCCCTCTTCCCCGGCGCCTTaGCGAGTCCTCCCGGCCGCCAGGGCTGTAGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PSGLTSPSSPAP*RVLPAARAVVR Trigger: GCGGACTACAGCCCTGGCGGCCGGGAGGACTCGCAAAGGCGCCGGGGAAGAGGGACTGGTGAGCCCCGAGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS TCA 72 bp | CCCGGCCGCCAGGGCTGTAGTCCGCCCGCACTCCTCTaGCATGAGCCCCTGACAATGGACCTGAGAGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGRQGCSPPALL*HEPLTMDLRAP Trigger: AGGCGCTCTCAGGTCCATTGTCAGGGGCTCATGTCAGAGGAGTGCGGGCGGACTACAGCCCTGGCGGCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS GCA 72 bp | CCCTGCCTTCGCCACCCGCCCCGCGGCATTCCTCACTaGGGTCTGATGCGCCAGCTGGGGCCAGTTGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCLRHPPRGIPH*GLMRQLGPVVS Trigger: TGAAACAACTGGCCCCAGCTGGCGCATCAGACCGCAGTGAGGAATGCCGCGGGGCGGGTGGCGAAGGCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CCA 72 bp | AGTGGAGGTCGCCAAAAGCGGGCGAGGGCCTCCGTCTaGGACCCACTGGTCTCTCTCCCACTGTGGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SGGRQKRARASV*DPLVSLPLWAK Trigger: CTTGGCCCACAGTGGGAGAGAGACCAGTGGGTCCCAGACGGAGGCCCTCGCCCGCTTTTGGCGACCTCCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS TCA 72 bp | TTCGCCACCCGCCCCGCGGCATTCCTCACTGCGGTCTaGTGCGCCAGCTGGGGCCAGTTGTTTCAAGCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FATRPAAFLTAV*CASWGQLFQAV Trigger: AACCGCTTGAAACAACTGGCCCCAGCTGGCGCATCAGACCGCAGTGAGGAATGCCGCGGGGCGGGTGGCGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS TCA 72 bp | CCCGGCCGCCAGGGCTGTAGTCCGCCCGCACTCCTCTaGCATGAGCCCCTGACACCTGCTCAGAATCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGRQGCSPPALL*HEPLTPAQNLH Trigger: ATGCAGATTCTGAGCAGGTGTCAGGGGCTCATGTCAGAGGAGTGCGGGCGGACTACAGCCCTGGCGGCCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CAA 72 bp | TCCACGATCTCCAGGCCGCAACTGTTGCACACACACTaGCCAGGAGGGCAGCCGGAGCCCGAGGCCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: STISRPQLLHTH*PGGQPEPEAMD Trigger: GTCCATGGCCTCGGGCTCCGGCTGCCCTCCTGGCAAGTGTGTGTGCAACAGTTGCGGCCTGGAGATCGTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS CAA 90 bp | AGGTATTTGTCCACGATCTCCAGGCCGCAACTGTTGCACACACACTaGCCAGGAGGGCAGCCGGAGCCCGAGGCCATGGACCGGGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RYLSTISRPQLLHTH*PGGQPEPEAMDRGE Trigger: CTCGCCCCGGTCCATGGCCTCGGGCTCCGGCTGCCCTCCTGGCAAGTGTGTGTGCAACAGTTGCGGCCTGGAGATCGTGGACAAATACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS CCA 72 bp | TGTGGGCCAAGACTGAGGTTTGATGGGCTTCCCAGCTaGGCAAGCCTGCTCCACGCGGGACACCCGGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: CGPRLRFDGLPS*ASLLHAGHPGI Trigger: GATTCCCGGGTGTCCCGCGTGGAGCAGGCTTGCCCAGCTGGGAAGCCCATCAAACCTCAGTCTTGGCCCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS TCA 72 bp | CTGGTCTCTCTCCCACTGTGGGCCAAGACTGAGGTTTaGTGGGCTTCCCAGCTGGGCAAGCCTGCTCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: LVSLPLWAKTEV*WASQLGKPAPR Trigger: GCGTGGAGCAGGCTTGCCCAGCTGGGAAGCCCATCAAACCTCAGTCTTGGCCCACAGTGGGAGAGAGACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS GCA 72 bp | GAAGGTATTTGTCCACGATCTCCAGGCCGCAACTGTTaGACACACACTTGCCAGGAGGGCAGCCGGAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: EGICPRSPGRNC*THTCQEGSRSP Trigger: CGGGCTCCGGCTGCCCTCCTGGCAAGTGTGTGTGCAACAGTTGCGGCCTGGAGATCGTGGACAAATACCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS CCA 72 bp | AACTCGAGTTTCAAGGACACTGCGATTCAGCTGGTCTaGCCAGGCGTCGGCTCGCTCACCTTCTCAGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NSSFKDTAIQLV*PGVGSLTFSGG Trigger: TCCCCCTGAGAAGGTGAGCGAGCCGACGCCTGGCCAGACCAGCTGAATCGCAGTGTCCTTGAAACTCGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS CAA 72 bp | AGAAGGTATTTGTCCACGATCTCCAGGCCGCAACTGTaGCACACACACTTGCCAGGAGGGCAGCCGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRYLSTISRPQL*HTHLPGGQPEP Trigger: GGGCTCCGGCTGCCCTCCTGGCAAGTGTGTGTGCAACAGTTGCGGCCTGGAGATCGTGGACAAATACCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS CAA 90 bp | TTCACCTTGAGAAGGTATTTGTCCACGATCTCCAGGCCGCAACTGTaGCACACACACTTGCCAGGAGGGCAGCCGGAGCCCGAGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: FTLRRYLSTISRPQL*HTHLPGGQPEPEAM Trigger: CATGGCCTCGGGCTCCGGCTGCCCTCCTGGCAAGTGTGTGTGCAACAGTTGCGGCCTGGAGATCGTGGACAAATACCTTCTCAAGGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS CCA 72 bp | GATGCGCCAGCTGGGGCCAGTTGTTTCAAGCGGTTCTaGAGGACCAATAGCGGAAAGCCAAGTTCTGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: DAPAGASCFKRF*RTNSGKPSSAT Trigger: GGTCGCAGAACTTGGCTTTCCGCTATTGGTCCTCCAGAACCGCTTGAAACAACTGGCCCCAGCTGGCGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CCA 72 bp | CAAACAACTCGAGTTTCAAGGACACTGCGATTCAGCTaGTCTGGCCAGGCGTCGGCTCGCTCACCTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QTTRVSRTLRFS*SGQASARSPSQ Trigger: CTGAGAAGGTGAGCGAGCCGACGCCTGGCCAGACCAGCTGAATCGCAGTGTCCTTGAAACTCGAGTTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS TCA 72 bp | GGAAAGCCAAGTTCTGCGACCAAGAGTCTGTACGAGTaGCTCGGTGTTTCTTTCCAGCCGGTTCGCAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GKPSSATKSLYE*LGVSFQPVRRA Trigger: CGCTCTGCGAACCGGCTGGAAAGAAACACCGAGTCACTCGTACAGACTCTTGGTCGCAGAACTTGGCTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CAA 72 bp | CCCCTCAGAGATGGCAGAGCTGTATACGGGCTCACCTaGGGACTTACCGGTCCCAGACTCCGTTTTATACCT | + |
|
Preference number: 6 (lower is better) Translates to: PLRDGRAVYGLT*GLTGPRLRFIP Trigger: AGGTATAAAACGGAGTCTGGGACCGGTAAGTCCCAAGGTGAGCCCGTATACAGCTCTGCCATCTCTGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CCA 72 bp | CCCTCAGAGATGGCAGAGCTGTATACGGGCTCACCTTaGGACTTACCGGTCCCAGACTCCGTTTTATACCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSEMAELYTGSP*DLPVPDSVLYL Trigger: AAGGTATAAAACGGAGTCTGGGACCGGTAAGTCCCAAGGTGAGCCCGTATACAGCTCTGCCATCTCTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS GCA 72 bp | TTGGGACTTACCGGTCCCAGACTCCGTTTTATACCTTaGTACCCACAGTTTCTGAGGGTAAGAGAGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGLTGPRLRFIP*YPQFLRVREGC Trigger: GCACCCCTCTCTTACCCTCAGAAACTGTGGGTAGCAAGGTATAAAACGGAGTCTGGGACCGGTAAGTCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CAA 72 bp | CTTGGGACTTACCGGTCCCAGACTCCGTTTTATACCTaGCTACCCACAGTTTCTGAGGGTAAGAGAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGTYRSQTPFYT*LPTVSEGKRGV Trigger: CACCCCTCTCTTACCCTCAGAAACTGTGGGTAGCAAGGTATAAAACGGAGTCTGGGACCGGTAAGTCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS GCA 72 bp | CCAGGGCAGAATTCAAACCCAGACGTCCGACGCGAATaGCTGACTTTTAACTACTTTGCGGTGTTTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PGQNSNPDVRRE*LTFNYFAVFVL Trigger: GAGGACAAACACCGCAAAGTAGTTAAAAGTCAGGCATTCGCGTCGGACGTCTGGGTTTGAATTCTGCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294638.9 |
||
| CDS CAA 72 bp | CCTTCTCAGGGGGAACTGCCAGCTCCGGCACGTCCTTaGCTACTAGTTTACACACAAACATCTGATCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSQGELPAPARP*LLVYTQTSDRS Trigger: AGAACGATCAGATGTTTGTGTGTAAACTAGTAGCAAAGGACGTGCCGGAGCTGGCAGTTCCCCCTGAGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS CCA 72 bp | GTAAAGCTGGTCCGAGCTCTTTTTGCTGGTTTTGGATaGTTAACATCTTGCTCTGTGAGGAGGGCACCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VKLVRALFAGFG*LTSCSVRRAPS Trigger: GGAAGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS TCA 72 bp | GCCAGGTCTGAAGATGAGGCCGTTACAGGTAGTTTCTaGACCTTGTTTAGGAGCCCAAACAACTCGAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ARSEDEAVTGSF*TLFRSPNNSSF Trigger: GAAACTCGAGTTGTTTGGGCTCCTAAACAAGGTTCAGAAACTACCTGTAACGGCCTCATCTTCAGACCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS GCA 72 bp | CGAGCTCTTTTTGCTGGTTTTGGATGGTTAACATCTTaGTCTGTGAGGAGGGCACCTTCCACACTAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RALFAGFGWLTS*SVRRAPSTLIP Trigger: TGGGATTAGTGTGGAAGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS CAA 90 bp | AAAGCTGGTCCGAGCTCTTTTTGCTGGTTTTGGATGGTTAACATCTaGCTCTGTGAGGAGGGCACCTTCCACACTAATCCCATTCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: KAGPSSFCWFWMVNI*LCEEGTFHTNPIPI Trigger: AATGGGAATGGGATTAGTGTGGAAGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS TCA 72 bp | GGCACGTCCTTTGCTACTAGTTTACACACAAACATCTaGTCGTTCTTCCAATACATGGCACTGCTAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTSFATSLHTNI*SFFQYMALLGL Trigger: CAGCCCTAGCAGTGCCATGTATTGGAAGAACGATCAGATGTTTGTGTGTAAACTAGTAGCAAAGGACGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356261.4 |
||
| CDS GCA 72 bp | AAGCTGATCTGCTGTAAAGCTGGTCCGAGCTCTTTTTaGTGGTTTTGGATGGTTAACATCTTGCTCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KLICCKAGPSSF*WFWMVNILLCE Trigger: CTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTTACAGCAGATCAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||
| CDS GCA 72 bp | TTTTTAAATTATCCAGCATGCAGTCATAATGTACTCTaGAGAGGACTTTCTCTTCCACCAAAGCAAACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FLNYPACSHNVL*RGLSLPPKQTP Trigger: AGGAGTTTGCTTTGGTGGAAGAGAAAGTCCTCTGCAGAGTACATTATGACTGCATGCTGGATAATTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000294638.9 ENST00000356261.4 |
||