RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LHX4 (Homo sapiens)

Ensembl gene IDs: ENSG00000121454

Ensembl transcript IDs: ENST00000263726.4, ENST00000558139.1, ENST00000561113.1

Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGTTCTGGCTTTCTaGCCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: TGSPCTTTGQRVLAF*PWDCSPRHGRCPAS
Trigger: GCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGTGGTGGTGCAGGGACTCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 90 bp GCGGGGGTTGGCCTTGCTCTGGCCTCAGGCTTAGTGATTTGCTACTaGAAACCTGCACAACGGGGAGTCCCTGCACCACCACTGGCCAGA +
Preference number: 1 (lower is better)
Translates to: AGVGLALASGLVICY*KPAQRGVPAPPLAR
Trigger: TCTGGCCAGTGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGAGGCCAGAGCAAGGCCAACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp CATTCAGGACAGCGTTTCCCACAGCAGTGCAGTCTGTCGCAGGAGTaGCAACTCGTAAAGCGGGGGTTGGCCTTGCTCTGGCCTCAGGCT +
Preference number: 1 (lower is better)
Translates to: HSGQRFPQQCSLSQE*QLVKRGLALLWPQA
Trigger: AGCCTGAGGCCAGAGCAAGGCCAACCCCCGCTTTACGAGTTGCCACTCCTGCGACAGACTGCACTGCTGTGGGAAACGCTGTCCTGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 90 bp ATTGAAGAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTaGAGCGGTGGTCCAGGGCTACTCAGCTCAGCCTCAGTCACCTGC +
Preference number: 1 (lower is better)
Translates to: IEEGTLCTKGTTQAI*SGGPGLLSSASVTC
Trigger: GCAGGTGACTGAGGCTGAGCTGAGTAGCCCTGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCTTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 90 bp CGTAAAGCGGGGGTTGGCCTTGCTCTGGCCTCAGGCTTAGTGATTTaGTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTG +
Preference number: 1 (lower is better)
Translates to: RKAGVGLALASGLVI*YCKPAQRGVPAPPL
Trigger: CAGTGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGAGGCCAGAGCAAGGCCAACCCCCGCTTTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 90 bp TGGCCTTGCTCTGGCCTCAGGCTTAGTGATTTGCTACTGCAAACCTaGACAACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGTTCTG +
Preference number: 1 (lower is better)
Translates to: WPCSGLRLSDLLLQT*TTGSPCTTTGQRVL
Trigger: CAGAACTCTCTGGCCAGTGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGAGGCCAGAGCAAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp CCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATaGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCAAGAAC +
Preference number: 1 (lower is better)
Translates to: PESSGFLTMGLQPKA*QVSSQQSREMQPKN
Trigger: GTTCTTGGGCTGCATCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp TTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTaGCCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAG +
Preference number: 1 (lower is better)
Translates to: FATANLHNGESLHHH*PESSGFLTMGLQPK
Trigger: CTTGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGTGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 90 bp CTCTGTTCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTaGACCTCCCAAACCTGCAGCTGTCTCCTTACCAGAGCTAGCAGC +
Preference number: 1 (lower is better)
Translates to: LCSPVLCLPKQRNAW*TSQTCSCLLTRASS
Trigger: GCTGCTAGCTCTGGTAAGGAGACAGCTGCAGGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGAACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp AAGTGGGAAAGTTGGTGTGATTCTTGCCTCTCGGTGGGCAATAGATaGGAGTGGGGGTGTCCTTCCTCTGTTCACCTGTGCTCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: KWESWCDSCLSVGNR*EWGCPSSVHLCSAS
Trigger: GGAGGCAGAGCACAGGTGAACAGAGGAAGGACACCCCCACTCTCATCTATTGCCCACCGAGAGGCAAGAATCACACCAACTTTCCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp TTCCTCTGTTCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTaGTGCACCTCCCAAACCTGCAGCTGTCTCCTTACCAGAGCTAGC +
Preference number: 1 (lower is better)
Translates to: FLCSPVLCLPKQRNA*CTSQTCSCLLTRAS
Trigger: GCTAGCTCTGGTAAGGAGACAGCTGCAGGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGAACAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp GCTCAGAGCAACTTCTGGAATCCCGCAGCCCTGAACCTGCTTGTTTaGCCGAACACAGTCCTCAAGTGGGAAAGTTGGTGTGATTCTTGC +
Preference number: 1 (lower is better)
Translates to: AQSNFWNPAALNLLV*PNTVLKWESWCDSC
Trigger: GCAAGAATCACACCAACTTTCCCACTTGAGGACTGTGTTCGGCCAAACAAGCAGGTTCAGGGCTGCGGGATTCCAGAAGTTGCTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp CAGCGGTGGTCCAGGGCTACTCAGCTCAGCCTCAGTCACCTGCAATaGAAACCACCTCTTGCCATCAGAGTCAATGATATAGATGGGACA +
Preference number: 1 (lower is better)
Translates to: QRWSRATQLSLSHLQ*KPPLAIRVNDIDGT
Trigger: TGTCCCATCTATATCATTGACTCTGATGGCAAGAGGTGGTTTTCATTGCAGGTGACTGAGGCTGAGCTGAGTAGCCCTGGACCACCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp GCACCTCCCAAACCTGCAGCTGTCTCCTTACCAGAGCTAGCAGCATaGAACTGTGCTTTTAGTGTGGTCCTACCAAGCAGAGTGTGGATG +
Preference number: 1 (lower is better)
Translates to: APPKPAAVSLPELAA*NCAFSVVLPSRVWM
Trigger: CATCCACACTCTGCTTGGTAGGACCACACTAAAAGCACAGTTTCATGCTGCTAGCTCTGGTAAGGAGACAGCTGCAGGTTTGGGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp TACTGTGGCTGTGCTTCTAAACAGGCAGCAGTGTTTGCTGCTTTCTaGGGAGGTGGCTCTGGAAAACAAAGCTCTCCTGGTTTTCAGGCC +
Preference number: 1 (lower is better)
Translates to: YCGCASKQAAVFAAF*GGGSGKQSSPGFQA
Trigger: GGCCTGAAAACCAGGAGAGCTTTGTTTTCCAGAGCCACCTCCCCAGAAAGCAGCAAACACTGCTGCCTGTTTAGAAGCACAGCCACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp ACACAGTCCTCAAGTGGGAAAGTTGGTGTGATTCTTGCCTCTCGGTaGGCAATAGATGAGAGTGGGGGTGTCCTTCCTCTGTTCACCTGT +
Preference number: 1 (lower is better)
Translates to: TQSSSGKVGVILASR*AIDESGGVLPLFTC
Trigger: ACAGGTGAACAGAGGAAGGACACCCCCACTCTCATCTATTGCCCACCGAGAGGCAAGAATCACACCAACTTTCCCACTTGAGGACTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp GAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTTTTaGGAGGCATTGTGTGAGACACACCAGTTGGAGCAAAGTTCCCAA +
Preference number: 1 (lower is better)
Translates to: EASTLGVSVLVRAVF*EALCETHQLEQSSQ
Trigger: TTGGGAACTTTGCTCCAACTGGTGTGTCTCACACAATGCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp CGGCTTTTCTCCATTTCCAAACCCCAGAAGAGTCCTGTCATGCAATaGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCCAACCT +
Preference number: 1 (lower is better)
Translates to: RLFSISKPQKSPVMQ*LISGTSPPIMLTQP
Trigger: AGGTTGGGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACTCTTCTGGGGTTTGGAAATGGAGAAAAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp TTCAGGCCAGTGCTCTCAAGGGTTTTTCCAGCTAACCAGCCCTACTaGTGCCAAAGAACTATTGACCTCGTCAACTGCTCACTGAGTTCC +
Preference number: 1 (lower is better)
Translates to: FRPVLSRVFPANQPY*CQRTIDLVNCSLSS
Trigger: GGAACTCAGTGAGCAGTTGACGAGGTCAATAGTTCTTTGGCATCAGTAGGGCTGGTTAGCTGGAAAAACCCTTGAGAGCACTGGCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp GAGTGGACTGTCATACAACACACAGCCTTTGCTCATCAGAAGCCTTaGGCCCCCTCCTGTAAAGAGGCAGTTGGAAATCACCAGTTTGAG +
Preference number: 1 (lower is better)
Translates to: EWTVIQHTAFAHQKP*APSCKEAVGNHQFE
Trigger: CTCAAACTGGTGATTTCCAACTGCCTCTTTACAGGAGGGGGCTCAAGGCTTCTGATGAGCAAAGGCTGTGTGTTGTATGACAGTCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 90 bp CATGGTTATAACCAAGTTGTCAGTCGTGGCACGTGGAAGTGTAGGTaGAGAGAGTGGACTGTCATACAACACACAGCCTTTGCTCATCAG +
Preference number: 1 (lower is better)
Translates to: HGYNQVVSRGTWKCR*REWTVIQHTAFAHQ
Trigger: CTGATGAGCAAAGGCTGTGTGTTGTATGACAGTCCACTCTCTGCACCTACACTTCCACGTGCCACGACTGACAACTTGGTTATAACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp CCCTACAAGGGATGGGGAACTCTGGAAGACTGGCATCAGCCGATATaGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACAAAT +
Preference number: 1 (lower is better)
Translates to: PYKGWGTLEDWHQPI*LNRLQVWNPNVSTN
Trigger: ATTTGTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCAGTCTTCCAGAGTTCCCCATCCCTTGTAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp ACTCCAAATATTTCACCCTACAAGGGATGGGGAACTCTGGAAGACTaGCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCA +
Preference number: 1 (lower is better)
Translates to: TPNISPYKGWGTLED*HQPIWLNRLQVWNP
Trigger: TGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCAGTCTTCCAGAGTTCCCCATCCCTTGTAGGGTGAAATATTTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp CATGAAACTGTGCTTTTAGTGTGGTCCTACCAAGCAGAGTGTGGATaGGATGGCTTTGCTGAGCTCTCTCTTTTTGGCTCCAGTCACTCA +
Preference number: 1 (lower is better)
Translates to: HETVLLVWSYQAECG*DGFAELSLFGSSHS
Trigger: TGAGTGACTGGAGCCAAAAAGAGAGAGCTCAGCAAAGCCATCCCATCCACACTCTGCTTGGTAGGACCACACTAAAAGCACAGTTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp TTTACAGCCCACAGCCTGTCTTGTGGAATAAATGATACAAGCAATTaGAGAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTG +
Preference number: 1 (lower is better)
Translates to: FTAHSLSCGINDTSN*RRHTVHQGDDSGNL
Trigger: CAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCTTCAATTGCTTGTATCATTTATTCCACAAGACAGGCTGTGGGCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp ACAAGGGATGGGGAACTCTGGAAGACTGGCATCAGCCGATATGGCTaGACAGACTGCAGGTTTGGAATCCAAATGTGTCTACAAATGTTC +
Preference number: 1 (lower is better)
Translates to: TRDGELWKTGISRYG*TDCRFGIQMCLQMF
Trigger: GAACATTTGTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCAGTCTTCCAGAGTTCCCCATCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp TTGCATAGCAAGTCCTTGAAGGGCCAAGAACCTGACTCCCAACACTaGTTTACCCATCGGGCCAGCTTCTTAGCCCTTAAATCTGGTATT +
Preference number: 1 (lower is better)
Translates to: LHSKSLKGQEPDSQH*FTHRASFLALKSGI
Trigger: AATACCAGATTTAAGGGCTAAGAAGCTGGCCCGATGGGTAAATCAGTGTTGGGAGTCAGGTTCTTGGCCCTTCAAGGACTTGCTATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp CCAGCAATCCAGAGAGATGCAGCCCAAGAACCACTTAGAACCCTTTaGACAATTTTAGGGCTGCTCCCTAAATTACTCTTCCCAACCAAG +
Preference number: 1 (lower is better)
Translates to: PAIQRDAAQEPLRTL*TILGLLPKLLFPTK
Trigger: CTTGGTTGGGAAGAGTAATTTAGGGAGCAGCCCTAAAATTGTCCAAAGGGTTCTAAGTGGTTCTTGGGCTGCATCTCTCTGGATTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp GGTCATTATTTTCATGGTTATAACCAAGTTGTCAGTCGTGGCACGTaGAAGTGTAGGTGCAGAGAGTGGACTGTCATACAACACACAGCC +
Preference number: 1 (lower is better)
Translates to: GHYFHGYNQVVSRGT*KCRCREWTVIQHTA
Trigger: GGCTGTGTGTTGTATGACAGTCCACTCTCTGCACCTACACTTCCACGTGCCACGACTGACAACTTGGTTATAACCATGAAAATAATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 90 bp AAGAAGCAAACACAGCTTCCCAGAGGGACAGGAATAAATTCCAGCTaGCTAAATTCCAGTTTGCACATGGAGAGCTTCCTGATGGTAGAT +
Preference number: 1 (lower is better)
Translates to: KKQTQLPRGTGINSS*LNSSLHMESFLMVD
Trigger: ATCTACCATCAGGAAGCTCTCCATGTGCAAACTGGAATTTAGCCAGCTGGAATTTATTCCTGTCCCTCTGGGAAGCTGTGTTTGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp TCACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTaGCCAATCCAAGAAAGAAGAGAGCCAGTGATGTGCTTTTCATTT +
Preference number: 1 (lower is better)
Translates to: SLFRTVGATTAKRAN*PIQERREPVMCFSF
Trigger: AAATGAAAAGCACATCACTGGCTCTCTTCTTTCTTGGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 90 bp AGCCCTACTGATGCCAAAGAACTATTGACCTCGTCAACTGCTCACTaGGTTCCTCAAGAGATTTATTATATTATTAGTATAAATGAGGAA +
Preference number: 1 (lower is better)
Translates to: SPTDAKELLTSSTAH*VPQEIYYIISINEE
Trigger: TTCCTCATTTATACTAATAATATAATAAATCTCTTGAGGAACTCAGTGAGCAGTTGACGAGGTCAATAGTTCTTTGGCATCAGTAGGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 90 bp AGAATTTCCATATTTATTTTACATAATTTTACCGTACACATCTCATaGCAACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTG +
Preference number: 1 (lower is better)
Translates to: RISIFILHNFTVHIS*QHTGGIYKQTHQLL
Trigger: CAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTTGGCATGAGATGTGTACGGTAAAATTATGTAAAATAAATATGGAAATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGAGGAACTCTGGAAGACTaGCATCAGCCGATATGGCTG +
Preference number: 2 (lower is better)
Translates to: PWDCSPRHGRCPASNPERGTLED*HQPIWL
Trigger: CAGCCATATCGGCTGATGCCAGTCTTCCAGAGTTCC...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCCCTGACTCCCAACACTaGTTTACCCATCGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTPDSQH*FTHRAS
Trigger: GCTGGCCCGATGGGTAAATCAGTGTTGGGAGTCAGG...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGAATCACAGTCACCTTGTaGTACCAAAGCACTGAGCAG +
Preference number: 2 (lower is better)
Translates to: PWDCSPRHGRCPASNPERITVTL*YQSTEQ
Trigger: CTGCTCAGTGCTTTGGTAGCACAAGGTGACTGTGAT...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAACGACTCAGGCAATCTaGAGCGGTGGTCCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPTTQAI*SGGPGL
Trigger: TAGCCCTGGACCACCGCTGCAGATTGCCTGAGTCGT...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCTCCCTGCACCACCACTaGCCAGAGAGTTCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTSLHHH*PESSGF
Trigger: AAAGCCAGAACTCTCTGGCCAGTGGTGGTGCAGGGA...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCGAGTCTCAGTTCTGGTaGGAGCAGTGTTTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTESQFW*EQCFGR
Trigger: CCTCCCAAAACACTGCTCTCACCAGAACTGAGACTC...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCACAACGGGGAGTCCCTaGACCACCACTGGCCAGAGA +
Preference number: 2 (lower is better)
Translates to: KSTSQALQIMVASRRSHFTTGSP*TTTGQR
Trigger: TCTCTGGCCAGTGGTGGTGCAGGGACTCCCCGTTGT...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAAACAATGCCCTAGTGTaGTCTCACAGCCTTCTAGGA +
Preference number: 2 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLNNALV*SHSLLG
Trigger: TCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTT...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGACCACTTAGAACCCTTTaGACAATTTTAGGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: PWDCSPRHGRCPASNPERPLRTL*TILGLL
Trigger: GAGCAGCCCTAAAATTGTCCAAAGGGTTCTAAGTGG...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCATCAGCCGATATGGCTaGACAGACTGCAGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTISRYG*TDCRFG
Trigger: TCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGAT...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCATGGGATGGCTTTGCTaGGCTCTCTCTTTTTGGCTC +
Preference number: 2 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTMGWLC*ALSFWL
Trigger: GAGCCAAAAAGAGAGAGCTCAGCAAAGCCATCCCAT...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTATTGCTACTGCAAACCTaGACAACGGGGAGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLLLLQT*TTGSPC
Trigger: GCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAA...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 90 bp GGAAGTGTAGGTGCAGAGAGTGGACTGTCATACAACACACAGCCTTaGCTCATCAGAAGCCTTGAGCCCCCTCCTGTAAAGAGGCAGTTG +
Preference number: 2 (lower is better)
Translates to: GSVGAESGLSYNTQP*LIRSLEPPPVKRQL
Trigger: CAACTGCCTCTTTACAGGAGGGGGCTCAAGGCTTCTGATGAGCAAAGGCTGTGTGTTGTATGACAGTCCACTCTCTGCACCTACACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCACAACACACAGCCTTTaGTCATCAGAAGCCTTGAGC +
Preference number: 2 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTTTHSL*SSEALS
Trigger: GCTCAAGGCTTCTGATGAGCAAAGGCTGTGTGTTGT...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCGGGCAGCTTTTCATCTaGTTCATTGCCCAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTGQLFI*FIAQQS
Trigger: GCTCTGCTGGGCAATGAACCAGATGAAAAGCTGCCC...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCTCCCCAGGGAAACAATaGCCTAGTGTGGTCTCACAG +
Preference number: 2 (lower is better)
Translates to: KSTSQALQIMVASRRSHFSPGKQ*PSVVSQ
Trigger: CTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGA...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCATTGACCTCGTCAACTaGTCACTGAGTTCCTCAAGA +
Preference number: 2 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTIDLVN*SLSSSR
Trigger: TCTTGAGGAACTCAGTGAGCAGTTGACGAGGTCAAT...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCTCACCCTACAAGGGATaGGGAACTCTGGAAGACTGG +
Preference number: 2 (lower is better)
Translates to: KSTSQALQIMVASRRSHFSPYKG*GTLEDW
Trigger: CCAGTCTTCCAGAGTTCCCCATCCCTTGTAGGGTGA...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 90 bp CTTCCCAGAGGGACAGGAATAAATTCCAGCTGGCTAAATTCCAGTTaGCACATGGAGAGCTTCCTGATGGTAGATGGGTGCACAAGGTGG +
Preference number: 2 (lower is better)
Translates to: LPRGTGINSSWLNSS*HMESFLMVDGCTRW
Trigger: CCACCTTGTGCACCCATCTACCATCAGGAAGCTCTCCATGTGCAAACTGGAATTTAGCCAGCTGGAATTTATTCCTGTCCCTCTGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 90 bp GCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTATAACCAAGTaGTCAGTCGTGGCACGTGGAAGTGTAGGTGCAGAGAGTGGACTG +
Preference number: 2 (lower is better)
Translates to: AGWGGMVIIFMVITK*SVVARGSVGAESGL
Trigger: CAGTCCACTCTCTGCACCTACACTTCCACGTGCCACGACTGACAACTTGGTTATAACCATGAAAATAATGACCATACCTCCCCAGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAGTGAGAGCAGTGTTTTaGGAGGCATTGTGTGAGACA +
Preference number: 2 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLVRAVF*EALCET
Trigger: TGTCTCACACAATGCCTCCCAAAACACTGCTCTCAC...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCTGGCATCAGCCGATATaGCTGAACAGACTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: KSTSQALQIMVASRRSHFWHQPI*LNRLQV
Trigger: AACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCA...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCACTGCAGCCCAAGGCATaGCAGGTGTCCAGCCAGCAA +
Preference number: 2 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSLQPKA*QVSSQQ
Trigger: TTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAG...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 90 bp ACCAAGCAGAGTGTGGATGGGATGGCTTTGCTGAGCTCTCTCTTTTaGGCTCCAGTCACTCACTGTTTAGAACAGTTGGAGCAACTACTG +
Preference number: 2 (lower is better)
Translates to: TKQSVDGMALLSSLF*APVTHCLEQLEQLL
Trigger: CAGTAGTTGCTCCAACTGTTCTAAACAGTGAGTGACTGGAGCCAAAAAGAGAGAGCTCAGCAAAGCCATCCCATCCACACTCTGCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACTTTACTCAAGGGCTGTaGGGCCTCTACCTTAGGAGT +
Preference number: 2 (lower is better)
Translates to: ASADMAEQTAGLESKCVYFTQGL*GLYLRS
Trigger: ACTCCTAAGGTAGAGGCCTCACAGCCCTTGAGTAAA...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAAGTGATCTTAAACAGTaGTACACAGAGGAGGATGCC +
Preference number: 2 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLSDLKQ*YTEEDA
Trigger: GGCATCCTCCTCTGTGTAGCACTGTTTAAGATCACT...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCAACAGACTGCAGGTTTaGAATCCAAATGTGTCTACA +
Preference number: 2 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTNRLQV*NPNVST
Trigger: TGTAGACACATTTGGATTCCAAACCTGCAGTCTGTT...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 90 bp GACAAGAAAGAGAAAGCACAAAGACTGAGAGGAATTTGCCTGAGGTaGCATAGCAAGTCCTTGAAGGGCCAAGAACCTGACTCCCAACAC +
Preference number: 2 (lower is better)
Translates to: DKKEKAQRLRGICLR*HSKSLKGQEPDSQH
Trigger: GTGTTGGGAGTCAGGTTCTTGGCCCTTCAAGGACTTGCTATGCAACCTCAGGCAAATTCCTCTCAGTCTTTGTGCTTTCTCTTTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp CAACAAGCCAGTGTCCCTAGAGCTCTAGGCCATTACCCCCTGTGCTGTGTTCTGAAGGCAAGTCTCTTTTaGTCCTTGAAGATATTCTCT +
Preference number: 2 (lower is better)
Translates to: QQASVPRALGHYPLCCVLKASLF*SLKIFS
Trigger: AGAGAATATCTTCAAGGATCAAAAGAGACTTGCCTT...CAGAACACAGCACAGGGGGTAATGGCCTAGAGCTCTAGGGACACTGGCTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCTTGGGAGGCATTGTGTaGGACACACCAGTTGGAGCA +
Preference number: 2 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSLGGIV*DTPVGA
Trigger: TGCTCCAACTGGTGTGTCTCACACAATGCCTCCCAA...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCATGCCAAAGAACTATTaGCCTCGTCAACTGCTCACT +
Preference number: 2 (lower is better)
Translates to: KSTSQALQIMVASRRSHFMPKNY*PRQLLT
Trigger: AGTGAGCAGTTGACGAGGTCAATAGTTCTTTGGCAT...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAGGCAATCTGCAGCGGTaGTCCAGGGCTACTCAGCTC +
Preference number: 2 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKGNLQR*SRATQL
Trigger: GAGCTGAGTAGCCCTGGACCACCGCTGCAGATTGCC...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCCCCAGTGTTCATGATTaGAGAATTCCCAATAGCACA +
Preference number: 2 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTPSVHD*RIPNST
Trigger: TGTGCTATTGGGAATTCTCCAATCATGAACACTGGG...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCATGCTGTGTTCTGAGATaGGTCTGCTCTCCCACTGCT +
Preference number: 2 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSCCVLR*VCSPTA
Trigger: AGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCA...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTACCTCAGTTTCCATTTTaGTTATACCAGTTACCACTG +
Preference number: 2 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLPQFPF*LYQLPL
Trigger: CAGTGGTAACTGGTATAAGCAAAATGGAAACTGAGG...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCCCAATAGCACAGAATTaGCTAGGATTAACACAACAT +
Preference number: 2 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTPIAQN*LGLTQH
Trigger: ATGTTGTGTTAATCCTAGCCAATTCTGTGCTATTGG...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCATGCTTTCTGGGGAGGTaGCTCTGGAAAACAAAGCTC +
Preference number: 2 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSCFLGR*LWKTKL
Trigger: GAGCTTTGTTTTCCAGAGCCACCTCCCCAGAAAGCA...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR GCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCTTTCATCTGGTTCATTaGCCAGCAGAGCCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSFHLVH*PAEPFL
Trigger: GAGAAAAGGCTCTGCTGGGCAATGAACCAGATGAAA...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 90 bp TCTGGAAGACTGGCATCAGCCGATATGGCTGAACAGACTGCAGGTTaGGAATCCAAATGTGTCTACAAATGTTCACTGATTGATTGTCAT +
Preference number: 2 (lower is better)
Translates to: SGRLASADMAEQTAG*ESKCVYKCSLIDCH
Trigger: ATGACAATCAATCAGTGAACATTTGTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCAGTCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 90 bp CCCCACCCCAGTGTTCATGATTGGAGAATTCCCAATAGCACAGAATaGGCTAGGATTAACACAACATCATCCATAAACATGGAACCTCAA +
Preference number: 2 (lower is better)
Translates to: PHPSVHDWRIPNSTE*ARINTTSSINMEPQ
Trigger: TTGAGGTTCCATGTTTATGGATGATGTTGTGTTAATCCTAGCCAATTCTGTGCTATTGGGAATTCTCCAATCATGAACACTGGGGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCACTCAAGCAAAAATCATaGCCACTGCAGCACACCAAA +
Preference number: 2 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSLKQKS*PLQHTK
Trigger: TTTGGTGTGCTGCAGTGGTCATGATTTTTGCTTGAG...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 90 bp CTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCGGAGGACTTCCATaGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAA +
Preference number: 2 (lower is better)
Translates to: LVWSHSLLGISGGLP*KIMEIHIGVLSILK
Trigger: TTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAATGGAAGTCCTCCGCTGATTCCTAGAAGGCTGTGAGACCACACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 90 bp ACAACATCATCCATAAACATGGAACCTCAAGAGAAGTGTCTATGTTaGCAGACTTCTCAAGCAAAAATCATGACCACTGCAGCACACCAA +
Preference number: 2 (lower is better)
Translates to: TTSSINMEPQEKCLC*QTSQAKIMTTAAHQ
Trigger: TTGGTGTGCTGCAGTGGTCATGATTTTTGCTTGAGAAGTCTGCAAACATAGACACTTCTCTTGAGGTTCCATGTTTATGGATGATGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR TCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAGTCTCTTTTGATCCTTaGAGATATTCTCTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKVSFDP*RYSLKP
Trigger: TGGCTTGAGAGAATATCTTCAAGGATCAAAAGAGAC...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp GGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTaGAGCGGTGGTCCAGGGCTACTCAGCTCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: GTLCTKGTTQAI*SGGPGLLSSAS
Trigger: TGAGGCTGAGCTGAGTAGCCCTGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp GTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTaGTCCAGGGCTACTCAGCTCAGCCTCAGTCACCTG +
Preference number: 3 (lower is better)
Translates to: VHQGDDSGNLQR*SRATQLSLSHL
Trigger: CAGGTGACTGAGGCTGAGCTGAGTAGCCCTGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp CCCTGCACCACCACTGGCCAGAGAGTTCTGGCTTTCTaGCCATGGGACTGCAGCCCAAGGCATGGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: PCTTTGQRVLAF*PWDCSPRHGRC
Trigger: ACACCTGCCATGCCTTGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGTGGTGGTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp CAGCGTTTCCCACAGCAGTGCAGTCTGTCGCAGGAGTaGCAACTCGTAAAGCGGGGGTTGGCCTTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: QRFPQQCSLSQE*QLVKRGLALLW
Trigger: CCAGAGCAAGGCCAACCCCCGCTTTACGAGTTGCCACTCCTGCGACAGACTGCACTGCTGTGGGAAACGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp GCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTaGCCAGAGAGTTCTGGCTTTCTGACCATGGGACTG +
Preference number: 3 (lower is better)
Translates to: ANLHNGESLHHH*PESSGFLTMGL
Trigger: CAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGTGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp TCTGGCCTCAGGCTTAGTGATTTGCTACTGCAAACCTaGACAACGGGGAGTCCCTGCACCACCACTGGCCAG +
Preference number: 3 (lower is better)
Translates to: SGLRLSDLLLQT*TTGSPCTTTGQ
Trigger: CTGGCCAGTGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGAGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp GGCCTTGCTCTGGCCTCAGGCTTAGTGATTTGCTACTaGAAACCTGCACAACGGGGAGTCCCTGCACCACCA +
Preference number: 3 (lower is better)
Translates to: GLALASGLVICY*KPAQRGVPAPP
Trigger: TGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGAGGCCAGAGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp GGGGTTGGCCTTGCTCTGGCCTCAGGCTTAGTGATTTaGTACTGCAAACCTGCACAACGGGGAGTCCCTGCA +
Preference number: 3 (lower is better)
Translates to: GVGLALASGLVI*YCKPAQRGVPA
Trigger: TGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGAGGCCAGAGCAAGGCCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp CTGCAGCACCATTCAGGACAGCGTTTCCCACAGCAGTaGAGTCTGTCGCAGGAGTGGCAACTCGTAAAGCGG +
Preference number: 3 (lower is better)
Translates to: LQHHSGQRFPQQ*SLSQEWQLVKR
Trigger: CCGCTTTACGAGTTGCCACTCCTGCGACAGACTGCACTGCTGTGGGAAACGCTGTCCTGAATGGTGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp CCAGAGCTGAGGGGATCTGGGGCTTTGAGGTCTGATTaGAAGCTCAGAGCAACTTCTGGAATCCCGCAGCCC +
Preference number: 3 (lower is better)
Translates to: PELRGSGALRSD*KLRATSGIPQP
Trigger: GGGCTGCGGGATTCCAGAAGTTGCTCTGAGCTTGCAATCAGACCTCAAAGCCCCAGATCCCCTCAGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp TCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATaGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAG +
Preference number: 3 (lower is better)
Translates to: SGFLTMGLQPKA*QVSSQQSREMQ
Trigger: CTGCATCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGGTCAGAAAGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp AGAGTGGGGGTGTCCTTCCTCTGTTCACCTGTGCTCTaGCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCC +
Preference number: 3 (lower is better)
Translates to: RVGVSFLCSPVL*LPKQRNAWCTS
Trigger: GGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGAACAGAGGAAGGACACCCCCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp CCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTaGACCTCCCAAACCTGCAGCTGTCTCCTTACCAGA +
Preference number: 3 (lower is better)
Translates to: PVLCLPKQRNAW*TSQTCSCLLTR
Trigger: TCTGGTAAGGAGACAGCTGCAGGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp CTCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTaGTCTCACAGCCTTCTAGGAATCAGCGGAGGACTT +
Preference number: 3 (lower is better)
Translates to: LPLLPQGNNALV*SHSLLGISGGL
Trigger: AAGTCCTCCGCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTaGTGCACCTCCCAAACCTGCAGCTGTCTCCTTACC +
Preference number: 3 (lower is better)
Translates to: SPVLCLPKQRNA*CTSQTCSCLLT
Trigger: GGTAAGGAGACAGCTGCAGGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp TGCAAGCTCAGAGCAACTTCTGGAATCCCGCAGCCCTaGACCTGCTTGTTTGGCCGAACACAGTCCTCAAGT +
Preference number: 3 (lower is better)
Translates to: CKLRATSGIPQP*TCLFGRTQSSS
Trigger: ACTTGAGGACTGTGTTCGGCCAAACAAGCAGGTTCAGGGCTGCGGGATTCCAGAAGTTGCTCTGAGCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp GGTGGTCCAGGGCTACTCAGCTCAGCCTCAGTCACCTaGAATGAAAACCACCTCTTGCCATCAGAGTCAATG +
Preference number: 3 (lower is better)
Translates to: GGPGLLSSASVT*NENHLLPSESM
Trigger: CATTGACTCTGATGGCAAGAGGTGGTTTTCATTGCAGGTGACTGAGGCTGAGCTGAGTAGCCCTGGACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp CTGAACCTGCTTGTTTGGCCGAACACAGTCCTCAAGTaGGAAAGTTGGTGTGATTCTTGCCTCTCGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LNLLVWPNTVLK*ESWCDSCLSVG
Trigger: GCCCACCGAGAGGCAAGAATCACACCAACTTTCCCACTTGAGGACTGTGTTCGGCCAAACAAGCAGGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp TCAAGTGGGAAAGTTGGTGTGATTCTTGCCTCTCGGTaGGCAATAGATGAGAGTGGGGGTGTCCTTCCTCTG +
Preference number: 3 (lower is better)
Translates to: SSGKVGVILASR*AIDESGGVLPL
Trigger: CAGAGGAAGGACACCCCCACTCTCATCTATTGCCCACCGAGAGGCAAGAATCACACCAACTTTCCCACTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp AACTTCTGGAATCCCGCAGCCCTGAACCTGCTTGTTTaGCCGAACACAGTCCTCAAGTGGGAAAGTTGGTGT +
Preference number: 3 (lower is better)
Translates to: NFWNPAALNLLV*PNTVLKWESWC
Trigger: ACACCAACTTTCCCACTTGAGGACTGTGTTCGGCCAAACAAGCAGGTTCAGGGCTGCGGGATTCCAGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp AGTTCTGGTGAGAGCAGTGTTTTGGGAGGCATTGTGTaGGACACACCAGTTGGAGCAAAGTTCCCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: SSGESSVLGGIV*DTPVGAKFPKA
Trigger: GGCCTTTGGGAACTTTGCTCCAACTGGTGTGTCTCACACAATGCCTCCCAAAACACTGCTCTCACCAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp CCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCTaGAGCTGTCTCCTTACCAGAGCTAGCAGCATGAAA +
Preference number: 3 (lower is better)
Translates to: PKQRNAWCTSQT*SCLLTRASSMK
Trigger: TTTCATGCTGCTAGCTCTGGTAAGGAGACAGCTGCAGGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp GGATGGGGAACTCTGGAAGACTGGCATCAGCCGATATaGCTGAACAGACTGCAGGTTTGGAATCCAAATGTG +
Preference number: 3 (lower is better)
Translates to: GWGTLEDWHQPI*LNRLQVWNPNV
Trigger: CACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCAGTCTTCCAGAGTTCCCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp ATTTCACCCTACAAGGGATGGGGAACTCTGGAAGACTaGCATCAGCCGATATGGCTGAACAGACTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: ISPYKGWGTLED*HQPIWLNRLQV
Trigger: AACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCAGTCTTCCAGAGTTCCCCATCCCTTGTAGGGTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAGAACAGACTGCAGGTTaGGAATCCAAATGTGTCTAC +
Preference number: 3 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPEQTAG*ESKCVY
Trigger: GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTC...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCGACATGCCTAAGTCTTaGCAGTCCTCAAAAGGTGAC +
Preference number: 3 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTDMPKS*QSSKGD
Trigger: GTCACCTTTTGAGGACTGCAAAGACTTAGGCATGTC...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCGATGCCAAAGAACTATaGACCTCGTCAACTGCTCAC +
Preference number: 3 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTDAKEL*TSSTAH
Trigger: GTGAGCAGTTGACGAGGTCAATAGTTCTTTGGCATC...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp GGGGAACTCTGGAAGACTGGCATCAGCCGATATGGCTaGACAGACTGCAGGTTTGGAATCCAAATGTGTCTA +
Preference number: 3 (lower is better)
Translates to: GELWKTGISRYG*TDCRFGIQMCL
Trigger: TAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCAGTCTTCCAGAGTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp AAGTCCTTGAAGGGCCAAGAACCTGACTCCCAACACTaGTTTACCCATCGGGCCAGCTTCTTAGCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: KSLKGQEPDSQH*FTHRASFLALK
Trigger: TTTAAGGGCTAAGAAGCTGGCCCGATGGGTAAATCAGTGTTGGGAGTCAGGTTCTTGGCCCTTCAAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp GTCATACAACACACAGCCTTTGCTCATCAGAAGCCTTaGGCCCCCTCCTGTAAAGAGGCAGTTGGAAATCAC +
Preference number: 3 (lower is better)
Translates to: VIQHTAFAHQKP*APSCKEAVGNH
Trigger: GTGATTTCCAACTGCCTCTTTACAGGAGGGGGCTCAAGGCTTCTGATGAGCAAAGGCTGTGTGTTGTATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR GCA 72 bp AACCAAGTTGTCAGTCGTGGCACGTGGAAGTGTAGGTaGAGAGAGTGGACTGTCATACAACACACAGCCTTT +
Preference number: 3 (lower is better)
Translates to: NQVVSRGTWKCR*REWTVIQHTAF
Trigger: AAAGGCTGTGTGTTGTATGACAGTCCACTCTCTGCACCTACACTTCCACGTGCCACGACTGACAACTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp ACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTTTTaGGAGGCATTGTGTGAGACACACCAGTTGGAGCAA +
Preference number: 3 (lower is better)
Translates to: TLGVSVLVRAVF*EALCETHQLEQ
Trigger: TTGCTCCAACTGGTGTGTCTCACACAATGCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp GTTGCTAAGCCAAATAGTCAACCTGCAACAGTGATCTaGGTGGGCAGCTTTTCATCTGGTTCATTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: VAKPNSQPATVI*VGSFSSGSLPS
Trigger: GCTGGGCAATGAACCAGATGAAAAGCTGCCCACCCAGATCACTGTTGCAGGTTGACTATTTGGCTTAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCCTCAGGCTTAGTGATTaGCTACTGCAAACCTGCACA +
Preference number: 3 (lower is better)
Translates to: KSTSQALQIMVASRRSHFLRLSD*LLQTCT
Trigger: TGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGAG...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAACTCGTAAAGCGGGGGTaGGCCTTGCTCTGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKLVKRG*ALLWPQ
Trigger: CTGAGGCCAGAGCAAGGCCAACCCCCGCTTTACGAG...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp GTGCTCTCAAGGGTTTTTCCAGCTAACCAGCCCTACTaGTGCCAAAGAACTATTGACCTCGTCAACTGCTCA +
Preference number: 3 (lower is better)
Translates to: VLSRVFPANQPY*CQRTIDLVNCS
Trigger: TGAGCAGTTGACGAGGTCAATAGTTCTTTGGCATCAGTAGGGCTGGTTAGCTGGAAAAACCCTTGAGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp AAACCTGCAGCTGTCTCCTTACCAGAGCTAGCAGCATaGAACTGTGCTTTTAGTGTGGTCCTACCAAGCAGA +
Preference number: 3 (lower is better)
Translates to: KPAAVSLPELAA*NCAFSVVLPSR
Trigger: TCTGCTTGGTAGGACCACACTAAAAGCACAGTTTCATGCTGCTAGCTCTGGTAAGGAGACAGCTGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAAGCGGAGGACTTCCATaGAAAATAATGGAAATTCAC +
Preference number: 3 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPSGGLP*KIMEIH
Trigger: GTGAATTTCCATTATTTTCAATGGAAGTCCTCCGCT...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCTTCAGAGGGGTAGACTaGCAAGCTCATCTAAACCAA +
Preference number: 3 (lower is better)
Translates to: KSTSQALQIMVASRRSHFFRGVD*QAHLNQ
Trigger: TTGGTTTAGATGAGCTTGCAAGTCTACCCCTCTGAA...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCAAGGGGATCTGGGGCTTaGAGGTCTGATTGCAAGCTC +
Preference number: 3 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSRGSGA*RSDCKL
Trigger: GAGCTTGCAATCAGACCTCAAAGCCCCAGATCCCCT...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTCCTATCACAGTCACCTaGTGCTACCAAAGCACTGAG +
Preference number: 3 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLPITVT*CYQSTE
Trigger: CTCAGTGCTTTGGTAGCACAAGGTGACTGTGATAGG...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCCCCAATAGCACAGAATaGGCTAGGATTAACACAACA +
Preference number: 3 (lower is better)
Translates to: KSTSQALQIMVASRRSHFPNSTE*ARINTT
Trigger: TGTTGTGTTAATCCTAGCCAATTCTGTGCTATTGGG...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp CACAGCCTGTCTTGTGGAATAAATGATACAAGCAATTaGAGAAGGCACACTGTGCACCAAGGGGACGACTCA +
Preference number: 3 (lower is better)
Translates to: HSLSCGINDTSN*RRHTVHQGDDS
Trigger: TGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCTTCAATTGCTTGTATCATTTATTCCACAAGACAGGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCACTGAGCTCTCTCTTTTaGGCTCCAGTCACTCACTGT +
Preference number: 3 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSLSSLF*APVTHC
Trigger: ACAGTGAGTGACTGGAGCCAAAAAGAGAGAGCTCAG...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp CAGAGAGATGCAGCCCAAGAACCACTTAGAACCCTTTaGACAATTTTAGGGCTGCTCCCTAAATTACTCTTC +
Preference number: 3 (lower is better)
Translates to: QRDAAQEPLRTL*TILGLLPKLLF
Trigger: GAAGAGTAATTTAGGGAGCAGCCCTAAAATTGTCCAAAGGGTTCTAAGTGGTTCTTGGGCTGCATCTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CCA 72 bp TTTCATGGTTATAACCAAGTTGTCAGTCGTGGCACGTaGAAGTGTAGGTGCAGAGAGTGGACTGTCATACAA +
Preference number: 3 (lower is better)
Translates to: FHGYNQVVSRGT*KCRCREWTVIQ
Trigger: TTGTATGACAGTCCACTCTCTGCACCTACACTTCCACGTGCCACGACTGACAACTTGGTTATAACCATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAGGGTACGCTATAAAATaGGTCAGAGAAGAGGGCCCG +
Preference number: 3 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKGYAIK*VREEGP
Trigger: CGGGCCCTCTTCTCTGACCAATTTTATAGCGTACCC...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp TACTCACCAAAAACTTCAAGGGCCTCTGAAATCCCATaGGTTGCTAAGCCAAATAGTCAACCTGCAACAGTG +
Preference number: 3 (lower is better)
Translates to: YSPKTSRASEIP*VAKPNSQPATV
Trigger: CACTGTTGCAGGTTGACTATTTGGCTTAGCAACTCATGGGATTTCAGAGGCCCTTGAAGTTTTTGGTGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR-3UTR CAA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCATTTTCATCTGGTTCATaGCCCAGCAGAGCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSFSSGS*PSRAFS
Trigger: AGAAAAGGCTCTGCTGGGCAATGAACCAGATGAAAA...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp AGGCCTCTCCTTCCACTATTGAACTGGGAATTAGTATaGTTAACTTACAAAAACTGGTCAACTTACTTACAG +
Preference number: 3 (lower is better)
Translates to: RPLLPLLNWELV*LTYKNWSTYLQ
Trigger: CTGTAAGTAAGTTGACCAGTTTTTGTAAGTTAATCATACTAATTCCCAGTTCAATAGTGGAAGGAGAGGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR TCA 72 bp GTAAAGAGGCAGTTGGAAATCACCAGTTTGAGCTTCTaGGATAGGAATGTCTTTTGTTTTACAGATTTCTTA +
Preference number: 3 (lower is better)
Translates to: VKRQLEITSLSF*DRNVFCFTDFL
Trigger: TAAGAAATCTGTAAAACAAAAGACATTCCTATCTCAGAAGCTCAAACTGGTGATTTCCAACTGCCTCTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCAAGCTGCTCCCTCACGTaGCGGGCAGGCTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: EDSCSLTCRAGLGEFLYASCSLT*RAGLGE
Trigger: CTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCT...TGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR GCA 90 bp CCTGTCTCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTCCCCCGTGGCCAGCTaGCGGTTGCAGATGATGCAA +
Preference number: 4 (lower is better)
Translates to: PVSEDSCSLTCRAGLGEFSPVAS*RLQMMQ
Trigger: TTGCATCATCTGCAACCGGCAGCTGGCCACGGGGGA...GAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR CCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGACCGCTGGAGTCACGGTaGAAGCCGGGCCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: PWDCSPRHGRCPASNPERPLESR*KPGPPL
Trigger: AAGCGGAGGGCCCGGCTTCCACCGTGACTCCAGCGG...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCATGCCGCCCGTCCTCCATaGGGTAGAATTCGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: RTAAPSRAGQAWGSSCMHAARPP*GRIRPP
Trigger: CGGGGGACGAATTCTACCTCATGGAGGACGGGCGGC...ATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR CCA 90 bp GACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCATTCGCGGACCACCTGGGTTaGGGGGATACCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: DSCSLTCRAGLGEFLYAFADHLG*GDTLLA
Trigger: TGCCAGCAGGGTATCCCCCCAACCCAGGTGGTCCGC...GAATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR CCA 90 bp CCTGTCTCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCCGTGCCGGGCAGGCTTaGGGGAGTTCTTGTATGCAT +
Preference number: 4 (lower is better)
Translates to: PVSEDSCSLTCRAGLGEFRAGQA*GSSCMH
Trigger: ATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACG...GAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR TCA 90 bp CCTGTCTCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCCTTAGCTCCAGCCTCTaGGTCATCGTTCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PVSEDSCSLTCRAGLGEFLSSSL*VIVLLG
Trigger: GCCAAGCAGAACGATGACTCAGAGGCTGGAGCTAAG...GAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR GCA 90 bp AGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCATCAAAGTCCTGGGCCTTaGGGACCACCTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RTAAPSRAGQAWGSSCMHQSPGP*GPPGLG
Trigger: CCCCAACCCAGGTGGTCCGCAAGGCCCAGGACTTTG...ATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR GCA 90 bp GACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCATTCGTCTCTGAGGACAGCTaGTCCCTCACGTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: DSCSLTCRAGLGEFLYAFVSEDS*SLTCRA
Trigger: TGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGAC...GAATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR GCA 90 bp CCTGTCTCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCAGGCCGTGCATTTTGTaGCGAAGCGCCGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: PVSEDSCSLTCRAGLGEFRPCIL*RSAVLT
Trigger: AGTCAGAACGGCGCTTCGGCACAAAATGCACGGCCT...GAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR GCA 90 bp TCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATCCTGCTGGCAGGCCGTaGATTTTGTGCCGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: SEDSCSLTCRAGLGEFLYPAGRP*ILCRSA
Trigger: GGCGCTTCGGCACAAAATGCACGGCCTGCCAGCAGG...ATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR CCA 90 bp GACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCATTCAGACGCTCCCAGCCCTaGAGAAGCACCTGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: DSCSLTCRAGLGEFLYAFRRSQP*RSTCPP
Trigger: TGGCGGACAGGTGCTTCTCCAGGGCTGGGAGCGTCT...GAATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR TCA 90 bp GAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCAGCTGCCGGTTGCAGATaGTGCAAGCAAAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: EDSCSLTCRAGLGEFLYAAAGCR*CKQSSA
Trigger: TGCACTGCTTTGCTTGCATCATCTGCAACCGGCAGC...TGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR TCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGGAATCCCGCAGCCCTaGACCTGCTTGTTTGGCCGA +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLGIPQP*TCLFGR
Trigger: TCGGCCAAACAAGCAGGTTCAGGGCTGCGGGATTCC...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATTCTCGTAGTCTTCCTTaGACACCAGCCGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SEDSCSLTCRAGLGEFLYSRSLP*TPAARP
Trigger: AGGACGGGCGGCTGGTGTGCAAGGAAGACTACGAGA...ATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR GCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAAGCTGCTCCCTCACGTaGCGGGCAGGCTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPSCSLT*RAGLGE
Trigger: CTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCT...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTACTCGCTCTCCGGGGTTaGTGCACATCCCAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLLALRG*CTSQVE
Trigger: CTCAACCTGGGATGTGCACCAACCCCGGAGAGCGAG...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGACCTTCCAGACCCTGCTaGCTGGGGAGGTATGGTCAT +
Preference number: 4 (lower is better)
Translates to: PWDCSPRHGRCPASNPERPSRPC*LGRYGH
Trigger: ATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGG...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCACCAGGACCTTCAGGATaGACTTGTCCAGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: EDSCSLTCRAGLGEFLYAPGPSG*TCPGCA
Trigger: AGCACATCCTGGACAAGTTCATCCTGAAGGTCCTGG...TGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR GCA 90 bp TCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATCTGCATCTGGCAGTCTaGACACTTGAGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SEDSCSLTCRAGLGEFLYLHLAV*TLEAGA
Trigger: AGCTCCTGCCTCAAGTGTGCAGACTGCCAGATGCAG...ATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR GCA 90 bp CCTGTCTCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTTAATGTCTCCAGCTaGTTGGCTGTGATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PVSEDSCSLTCRAGLGEFFNVSS*LAVMVV
Trigger: GACCACCATCACAGCCAAGCAGCTGGAGACATTAAA...GAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR GCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGAGTCTGGCTTACTCCCTaGCCTGCATGCGCAATGATG +
Preference number: 4 (lower is better)
Translates to: PWDCSPRHGRCPASNPERVWLTP*PACAMM
Trigger: CATCATTGCGCATGCAGGGCAGGGAGTAAGCCAGAC...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAGCGGACCACCTGGGTTaGGGGGATACCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPADHLG*GDTLLA
Trigger: TGCCAGCAGGGTATCCCCCCAACCCAGGTGGTCCGC...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CCTGTCTCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCAGTCATCGTTCTGCTTaGCTGTCTCGTAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PVSEDSCSLTCRAGLGEFSHRSA*LSRSLP
Trigger: AGGAAGACTACGAGACAGCCAAGCAGAACGATGACT...GAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR TCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGTAATCCAGCCCATTaGGCAAAGGAGCGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PWDCSPRHGRCPASNPERCNPAH*AKERGM
Trigger: CATCCCACGCTCCTTTGCTCAATGGGCTGGATTACA...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGAGTCAACCTGCAACAGTaGTCTGGGTGGGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PWDCSPRHGRCPASNPERVNLQQ*SGWAAF
Trigger: AAAAGCTGCCCACCCAGATCACTGTTGCAGGTTGAC...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCTCCCCCGTGGCCAGCTaGCGGTTGCAGATGATGCAA +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTSPVAS*RLQMMQ
Trigger: TTGCATCATCTGCAACCGGCAGCTGGCCACGGGGGA...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGCTTACTCCCTGCCCTaGATGCGCAATGATGCCCAA +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLAYSLP*MRNDAQ
Trigger: TTGGGCATCATTGCGCATGCAGGGCAGGGAGTAAGC...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCTGGGTCCCCCAGCCATaGCTCTCAGCGTCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTWVPQP*LSASGL
Trigger: TAAGCCAGACGCTGAGAGCCATGGCTGGGGGACCCA...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAATCGAGCCAAGAGCCTaGGCTAGTTGGAAAGTCGGG +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLIEPRA*ASWKVG
Trigger: CCCGACTTTCCAACTAGCCCAGGCTCTTGGCTCGAT...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGTCAGTCGTGGCACGTaGAAGTGTAGGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLVSRGT*KCRCRE
Trigger: CTCTCTGCACCTACACTTCCACGTGCCACGACTGAC...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGACAAGCAGAGTGTGGATaGGATGGCTTTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PWDCSPRHGRCPASNPERQAECG*DGFAEL
Trigger: GAGCTCAGCAAAGCCATCCCATCCACACTCTGCTTG...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCTCGGTGGGCAATAGATaGGAGTGGGGGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTSVGNR*EWGCPS
Trigger: GGAAGGACACCCCCACTCTCATCTATTGCCCACCGA...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAGCTCTCCGGGGTTGGTaGACATCCCAGGTTGAGACG +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPALRGW*TSQVET
Trigger: CGTCTCAACCTGGGATGTGCACCAACCCCGGAGAGC...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCCAAAGTCCTGGGCCTTaGGGACCACCTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTQSPGP*GPPGLG
Trigger: CCCCAACCCAGGTGGTCCGCAAGGCCCAGGACTTTG...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCTCTCGTAGTCTTCCTTaGACACCAGCCGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTSRSLP*TPAARP
Trigger: AGGACGGGCGGCTGGTGTGCAAGGAAGACTACGAGA...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTATCCCCAGGGAAACAATaGCCTAGTGTGGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLSPGKQ*PSVVSQ
Trigger: CTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGA...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCCGTTTCCCACAGCAGTaGAGTCTGTCGCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTRFPQQ*SLSQEW
Trigger: CCACTCCTGCGACAGACTGCACTGCTGTGGGAAACG...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCATCAGGCGTTTCTCTTTaGCCCTTCTGTTCTGAAACC +
Preference number: 4 (lower is better)
Translates to: EDSCSLTCRAGLGEFLYASGVSL*PFCSET
Trigger: GGTTTCAGAACAGAAGGGCCAAAGAGAAACGCCTGA...TGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR TCA 90 bp CAACAAGCCAGTGTCCCTAGAGCTCTAGGCCATTACCCCCTGTGCTGTGTTCTGGCTGCCGGTTGCAGATaGTGCAAGCAAAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QQASVPRALGHYPLCCVLAAGCR*CKQSSA
Trigger: TGCACTGCTTTGCTTGCATCATCTGCAACCGGCAGC...CAGAACACAGCACAGGGGGTAATGGCCTAGAGCTCTAGGGACACTGGCTTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTATCTCCTTCTCCTGCTTaGTGCTGCCCCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLSPSPA*CCPGSS
Trigger: AGAGGAGCCGGGGCAGCAGCAAGCAGGAGAAGGAGA...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCGAAGAAGGCACACTGTaGACCAAGGGGACGACTCAG +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTEEGTL*TKGTTQ
Trigger: CTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCTTC...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCACAACGGGGAGTCCCTaGACCACCACTGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTTTGSP*TTTGQR
Trigger: TCTCTGGCCAGTGGTGGTGCAGGGACTCCCCGTTGT...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTTTTGGGAGGCATTAGCGGGGGTTGGCCTTaGTCTGGCCTCAGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GLYLRSLSSGESSVLGGISGGWP*SGLRLS
Trigger: ACTAAGCCTGAGGCCAGAGCAAGGCCAACCCCCGCT...AATGCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGGTTTTCAGGCCAGTaGTCTCAAGGGTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PWDCSPRHGRCPASNPERWFSGQ*SQGFFQ
Trigger: CTGGAAAAACCCTTGAGAGCACTGGCCTGAAAACCA...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAGGCAGCAGTGTTTGCTaGTTTCTGGGGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPGSSVC*FLGRWL
Trigger: GAGCCACCTCCCCAGAAAGCAGCAAACACTGCTGCC...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCACAGGCAGCAGTGTTTaGTGCTTTCTGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTTGSSV*CFLGRW
Trigger: CCACCTCCCCAGAAAGCAGCAAACACTGCTGCCTGT...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCATCCGCCAGCTGCATCTaGCAGTCTGCACACTTGAGG +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPSASCI*QSAHLR
Trigger: CCTCAAGTGTGCAGACTGCCAGATGCAGCTGGCGGA...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAATTCTTGCCTCTCGGTaGGCAATAGATGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLILASR*AIDESG
Trigger: CCCACTCTCATCTATTGCCCACCGAGAGGCAAGAAT...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTTTTGGGAGGCATTGTGCACATCCCAGGTTaGGACGCTGTTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLYLRSLSSGESSVLGGIVHIPG*DAVAAA
Trigger: AGCTGCAGCAACAGCGTCTCAACCTGGGATGTGCAC...AATGCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTATGCCCCGGCTCCTCTTaGCGCTCTTATAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLCPGSS*RSYRTA
Trigger: GGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCA...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCGTGCTACCAAAGCACTaGGCAGCCAAGCCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTVLPKH*AAKPLS
Trigger: GCTTAGGGGCTTGGCTGCTCAGTGCTTTGGTAGCAC...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAAGAGTTCTGGCTTTCTaGCCATGGGACTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPRVLAF*PWDCSP
Trigger: TGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCT...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCCCTGACTCCCAACACTaGTTTACCCATCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTPDSQH*FTHRAS
Trigger: GCTGGCCCGATGGGTAAATCAGTGTTGGGAGTCAGG...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCGTGGGAAAGTTGGTGTaGTTCTTGCCTCTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPQGNNALVWSHSLLGISVGKLV*FLPLGG
Trigger: CCCACCGAGAGGCAAGAATCACACCAACTTTCCCAC...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCGGGACAGTCGCACTCTaGATCATCTCGGAGCGAAAG +
Preference number: 4 (lower is better)
Translates to: LPQGNNALVWSHSLLGISGTVAL*IISERK
Trigger: CTTTCGCTCCGAGATGATGCAGAGTGCGACTGTCCC...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAACGACTCAGGCAATCTaGAGCGGTGGTCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLTTQAI*SGGPGL
Trigger: TAGCCCTGGACCACCGCTGCAGATTGCCTGAGTCGT...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTCCCCAAGCAGGCCGCTaGAGTCACGGTGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLPQAGR*SHGGSR
Trigger: CCGGCTTCCACCGTGACTCCAGCGGCCTGCTTGGGG...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTATCAGGCGTTTCTCTTTaGCCCTTCTGTTCTGAAACC +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLSGVSL*PFCSET
Trigger: GGTTTCAGAACAGAAGGGCCAAAGAGAAACGCCTGA...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAAGGGATGGGGAACTCTaGAAGACTGGCATCAGCCGA +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPRDGEL*KTGISR
Trigger: TCGGCTGATGCCAGTCTTCCAGAGTTCCCCATCCCT...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCCCAGACCCTGCTGGCTaGGGAGGTATGGTCATTATT +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTPDPAG*GGMVII
Trigger: AATAATGACCATACCTCCCCAGCCAGCAGGGTCTGG...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp CAACTTCTGGAATCCCGCAGCCCTGAACCTGCTTGTTaGGCCGAACACAGTCCTCAAGTGGGAAAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QLLESRSPEPAC*AEHSPQVGKLV
Trigger: CACCAACTTTCCCACTTGAGGACTGTGTTCGGCCAAACAAGCAGGTTCAGGGCTGCGGGATTCCAGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGCCTCTGAAATCCCATaGGTTGCTAAGCCAAATAGT +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLASEIP*VAKPNS
Trigger: ACTATTTGGCTTAGCAACTCATGGGATTTCAGAGGC...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCAAGGTGGGTGGGAGCTaGAGCACCATTCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: KSTSQALQIMVASRRSHFKVGGS*STIQDS
Trigger: GCTGTCCTGAATGGTGCTGCAGCTCCCACCCACCTT...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCTTGCAGCCAGCGCACTaGGGAATCTGTTGCATCGGC +
Preference number: 4 (lower is better)
Translates to: KSTSQALQIMVASRRSHFLQPAH*GICCIG
Trigger: GCCGATGCAACAGATTCCCCAGTGCGCTGGCTGCAA...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACCTGCAGCCCAAGGCATaGCAGGTGTCCAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYLQPKA*QVSSQQ
Trigger: TTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAG...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTTTTGGGAGGCATTCTGGGGAGGTGGCTCTaGAAAACAAAGCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GLYLRSLSSGESSVLGGILGRWL*KTKLSW
Trigger: CCAGGAGAGCTTTGTTTTCCAGAGCCACCTCCCCAG...AATGCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCCTGAACCTGCTTGTTTaGCCGAACACAGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTLNLLV*PNTVLK
Trigger: CTTGAGGACTGTGTTCGGCCAAACAAGCAGGTTCAG...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp GGTGCAGAGAGTGGACTGTCATACAACACACAGCCTTaGCTCATCAGAAGCCTTGAGCCCCCTCCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: GAESGLSYNTQP*LIRSLEPPPVK
Trigger: CTTTACAGGAGGGGGCTCAAGGCTTCTGATGAGCAAAGGCTGTGTGTTGTATGACAGTCCACTCTCTGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp TGTGGTCCTACCAAGCAGAGTGTGGATGGGATGGCTTaGCTGAGCTCTCTCTTTTTGGCTCCAGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: CGPTKQSVDGMA*LSSLFLAPVTH
Trigger: GTGAGTGACTGGAGCCAAAAAGAGAGAGCTCAGCAAAGCCATCCCATCCACACTCTGCTTGGTAGGACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTACCAGGACCTTCAGGATaGACTTGTCCAGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLPGPSG*TCPGCA
Trigger: AGCACATCCTGGACAAGTTCATCCTGAAGGTCCTGG...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCTTGGGAGGCATTGTGTaGGACACACCAGTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTLGGIV*DTPVGA
Trigger: TGCTCCAACTGGTGTGTCTCACACAATGCCTCCCAA...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCTTTACTCAAGGGCTGTaGGGCCTCTACCTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LPQGNNALVWSHSLLGISFTQGL*GLYLRS
Trigger: ACTCCTAAGGTAGAGGCCTCACAGCCCTTGAGTAAA...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACTCAGTCACCTGCAATaGAAACCACCTCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPLSHLQ*KPPLAI
Trigger: GATGGCAAGAGGTGGTTTTCATTGCAGGTGACTGAG...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAATCAGCCGATATGGCTaGACAGACTGCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPISRYG*TDCRFG
Trigger: TCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGAT...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCGAGCTCTCCTTCTCCTaGTTGCTGCTGCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSELSFS*LLLPRL
Trigger: GAGCCGGGGCAGCAGCAAGCAGGAGAAGGAGAGCTC...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAACTCCCTGCCCTGCATaGGCAATGATGCCCAAATTA +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPTPCPA*AMMPKL
Trigger: TAATTTGGGCATCATTGCGCATGCAGGGCAGGGAGT...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CAACAAGCCAGTGTCCCTAGAGCTCTAGGCCATTACCCCCTGTGCTGTGTTCTGATCACAGTCACCTTGTaGTACCAAAGCACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QQASVPRALGHYPLCCVLITVTL*YQSTEQ
Trigger: CTGCTCAGTGCTTTGGTAGCACAAGGTGACTGTGAT...CAGAACACAGCACAGGGGGTAATGGCCTAGAGCTCTAGGGACACTGGCTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCATGGCAGGGACGATATaGAGGATGGAGACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: KSTSQALQIMVASRRSHFMAGTI*RMETGG
Trigger: TCCCCCAGTCTCCATCCTCCATATCGTCCCTGCCAT...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCTGGCATCAGCCGATATaGCTGAACAGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LPQGNNALVWSHSLLGISWHQPI*LNRLQV
Trigger: AACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCA...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACAGTCTGTCGCAGGAGTaGCAACTCGTAAAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYSLSQE*QLVKRG
Trigger: CCCCCGCTTTACGAGTTGCCACTCCTGCGACAGACT...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCATGGGATGGCTTTGCTaGGCTCTCTCTTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTMGWLC*ALSFWL
Trigger: GAGCCAAAAAGAGAGAGCTCAGCAAAGCCATCCCAT...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACGGGGATCTGGGGCTTTaGGGTCTGATTGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYGDLGL*GLIASS
Trigger: TGAGCTTGCAATCAGACCTCAAAGCCCCAGATCCCC...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTCCTGCTGGCAGGCCGTaGATTTTGTGCCGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLPAGRP*ILCRSA
Trigger: AGCGCTTCGGCACAAAATGCACGGCCTGCCAGCAGG...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCCGGGATAGCCTACACTaGTTCCTGTGGAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: KSTSQALQIMVASRRSHFRDSLH*FLWRCQ
Trigger: CTGACATCTCCACAGGAAGCAGTGTAGGCTATCCCG...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CAACAAGCCAGTGTCCCTAGAGCTCTAGGCCATTACCCCCTGTGCTGTGTTCTGTTAGTGATTTGCTACTaGAAACCTGCACAACGGGGA +
Preference number: 4 (lower is better)
Translates to: QQASVPRALGHYPLCCVLLVICY*KPAQRG
Trigger: TCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAA...CAGAACACAGCACAGGGGGTAATGGCCTAGAGCTCTAGGGACACTGGCTTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CAACAAGCCAGTGTCCCTAGAGCTCTAGGCCATTACCCCCTGTGCTGTGTTCTGACATGCCTAAGTCTTTaGAGTCCTCAAAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: QQASVPRALGHYPLCCVLTCLSL*SPQKVT
Trigger: GGTCACCTTTTGAGGACTGCAAAGACTTAGGCATGT...CAGAACACAGCACAGGGGGTAATGGCCTAGAGCTCTAGGGACACTGGCTTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCTTTCATCTGGTTCATTaGCCAGCAGAGCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTFHLVH*PAEPFL
Trigger: GAGAAAAGGCTCTGCTGGGCAATGAACCAGATGAAA...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCACGTGGAAGTGTAGGTaGAGAGAGTGGACTGTCATA +
Preference number: 4 (lower is better)
Translates to: LPQGNNALVWSHSLLGISTWKCR*REWTVI
Trigger: TATGACAGTCCACTCTCTGCACCTACACTTCCACGT...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCCAAAGGAATGCTTGGTaGACCTCCCAAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSTSQALQIMVASRRSHFQRNAW*TSQTCS
Trigger: GCTGCAGGTTTGGGAGGTGCACCAAGCATTCCTTTG...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACCAAAGGAGCGTGGGATaGCAGGGACGATATGGAGGA +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYQRSVG*QGRYGG
Trigger: TCCTCCATATCGTCCCTGCCATCCCACGCTCCTTTG...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTTTTGGGAGGCATTGTGAGACACACCAGTTaGAGCAAAGTTCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GLYLRSLSSGESSVLGGIVRHTS*SKVPKG
Trigger: GCCTTTGGGAACTTTGCTCCAACTGGTGTGTCTCAC...AATGCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCCTGGCCAGAGAGTTCTaGCTTTCTGACCATGGGACT +
Preference number: 4 (lower is better)
Translates to: KSTSQALQIMVASRRSHFLAREF*LSDHGT
Trigger: AGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAG...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACTCCCTGCACCACCACTaGCCAGAGAGTTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYSLHHH*PESSGF
Trigger: AAAGCCAGAACTCTCTGGCCAGTGGTGGTGCAGGGA...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTTTTGGGAGGCATTCCTGCAACAGTGATCTaGGTGGGCAGCTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: GLYLRSLSSGESSVLGGIPATVI*VGSFSS
Trigger: AGATGAAAAGCTGCCCACCCAGATCACTGTTGCAGG...AATGCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CAACAAGCCAGTGTCCCTAGAGCTCTAGGCCATTACCCCCTGTGCTGTGTTCTGAAAACAAAGCTCTCCTaGTTTTCAGGCCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: QQASVPRALGHYPLCCVLKTKLS*FSGQCS
Trigger: AGAGCACTGGCCTGAAAACCAGGAGAGCTTTGTTTT...CAGAACACAGCACAGGGGGTAATGGCCTAGAGCTCTAGGGACACTGGCTTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAAGTCCTGTCATGCAATaGCTCATTAGTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLSPVMQ*LISGTS
Trigger: GCTGGTGCCACTAATGAGCCATTGCATGACAGGACT...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGAAAGGACACTGCCAAATaGTTTTCTTGTGGCTTAATT +
Preference number: 4 (lower is better)
Translates to: PWDCSPRHGRCPASNPERKDTAK*FSCGLI
Trigger: AATTAAGCCACAAGAAAACCATTTGGCAGTGTCCTT...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTTTTGGGAGGCATTTTTAATGTCTCCAGCTaGTTGGCTGTGATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GLYLRSLSSGESSVLGGIFNVSS*LAVMVV
Trigger: GACCACCATCACAGCCAAGCAGCTGGAGACATTAAA...AATGCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAACAACACACAGCCTTTaGTCATCAGAAGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLTTHSL*SSEALS
Trigger: GCTCAAGGCTTCTGATGAGCAAAGGCTGTGTGTTGT...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCCGTGCCGGGCAGGCTTaGGGGAGTTCTTGTATGCAT +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSRAGQA*GSSCMH
Trigger: ATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACG...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCATGGCTCTCAGCGTCTaGCTTACTCCCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSMALSV*LTPCPA
Trigger: TGCAGGGCAGGGAGTAAGCCAGACGCTGAGAGCCAT...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACAGAGCCTGGGCTAGTTaGAAAGTCGGGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYRAWAS*KVGIAY
Trigger: GTAGGCTATCCCGACTTTCCAACTAGCCCAGGCTCT...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTACCAATAGCACAGAATTaGCTAGGATTAACACAACAT +
Preference number: 4 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLPIAQN*LGLTQH
Trigger: ATGTTGTGTTAATCCTAGCCAATTCTGTGCTATTGG...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCACTGTGCTTTTAGTGTaGTCCTACCAAGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LPQGNNALVWSHSLLGISTVLLV*SYQAEC
Trigger: ACACTCTGCTTGGTAGGACCACACTAAAAGCACAGT...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCCCCTGTGCTGTGTTCTaGGATGAGTCTGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSPCAVF*DESALP
Trigger: TGGGAGAGCAGACTCATCTCAGAACACAGCACAGGG...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCAATGATACAAGCAATTaGAGAAGGCACACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LPQGNNALVWSHSLLGISNDTSN*RRHTVH
Trigger: GTGCACAGTGTGCCTTCTTCAATTGCTTGTATCATT...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCGCTGGTTCCTGGAAATaGCCAAAACTGTCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: KSTSQALQIMVASRRSHFAGSWK*PKLSSN
Trigger: ATTGGAGGACAGTTTTGGTCATTTCCAGGAACCAGC...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACGCAGTCCTCAAAAGGTaGCCAACCATTCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYAVLKR*PTIRRR
Trigger: CCTTCTACGAATGGTTGGTCACCTTTTGAGGACTGC...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACTGCATAGCAAGTCCTTaGAGGGCCAAGAACCTGACT +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYCIASP*RAKNLT
Trigger: AGTCAGGTTCTTGGCCCTTCAAGGACTTGCTATGCA...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCAGTCTGCCTATGACATaGCTAAGTCTTTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTSLPMT*LSLCSP
Trigger: AGGACTGCAAAGACTTAGGCATGTCATAGGCAGACT...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCAGAAGAGTCCTGTCATaGAATGGCTCATTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTRRVLS*NGSLVA
Trigger: TGCCACTAATGAGCCATTGCATGACAGGACTCTTCT...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCAGACTGAGAGGAATTTaGCTGAGGTTGCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTRLRGI*LRLHSK
Trigger: CTTGCTATGCAACCTCAGGCAAATTCCTCTCAGTCT...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAGCTTTGAGGTCTGATTaGAAGCTCAGAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLALRSD*KLRATS
Trigger: AGAAGTTGCTCTGAGCTTGCAATCAGACCTCAAAGC...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCCTGGCTGGGGAGGTATaGTCATTATTTTCATGGTTA +
Preference number: 4 (lower is better)
Translates to: LPQGNNALVWSHSLLGISLAGEV*SLFSWL
Trigger: TAACCATGAAAATAATGACCATACCTCCCCAGCCAG...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCGCTCAGAGCAACTTCTaGAATCCCGCAGCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSAQSNF*NPAALN
Trigger: GTTCAGGGCTGCGGGATTCCAGAAGTTGCTCTGAGC...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp GGGACAGGAATAAATTCCAGCTGGCTAAATTCCAGTTaGCACATGGAGAGCTTCCTGATGGTAGATGGGTGC +
Preference number: 4 (lower is better)
Translates to: GTGINSSWLNSS*HMESFLMVDGC
Trigger: GCACCCATCTACCATCAGGAAGCTCTCCATGTGCAAACTGGAATTTAGCCAGCTGGAATTTATTCCTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp GAGAAAGCACAAAGACTGAGAGGAATTTGCCTGAGGTaGCATAGCAAGTCCTTGAAGGGCCAAGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: EKAQRLRGICLR*HSKSLKGQEPD
Trigger: GTCAGGTTCTTGGCCCTTCAAGGACTTGCTATGCAACCTCAGGCAAATTCCTCTCAGTCTTTGTGCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCATGTTTCCAGTCCCTTTaGTCTCGCTCTCCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSCFQSL*SRSPGL
Trigger: CAACCCCGGAGAGCGAGATCAAAGGGACTGGAAACA...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAGGCAGTCTGCACACTTaGGGCAGGAGCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKGSLHT*GRSCAS
Trigger: ACTGGCACAGCTCCTGCCTCAAGTGTGCAGACTGCC...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCTTGTGCCGAAGCGCTTaGAGAAGTCCTCCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSLCRSA*RSPPCS
Trigger: ACTGCAAGGAGGACTTCTTCAAGCGCTTCGGCACAA...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCGCCGCCCGTCCTCCATaGGGTAGAATTCGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVAARPP*GRIRPP
Trigger: CGGGGGACGAATTCTACCTCATGGAGGACGGGCGGC...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACAGTTCTGAGAGAATTTaGTCCTCTCGGAAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYSSERI*SSRKLS
Trigger: GCTGAGCTTCCGAGAGGATCAAATTCTCTCAGAACT...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTGCCCTGCATGCGCAATaGTGCCCAAATTACTGTCCA +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLALHAQ*CPNYCP
Trigger: TGGACAGTAATTTGGGCATCATTGCGCATGCAGGGC...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCAGTCTCTTTTGATCCTTaGAGATATTCTCTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPVSFDP*RYSLKP
Trigger: TGGCTTGAGAGAATATCTTCAAGGATCAAAAGAGAC...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTTGCTGTGTTCTGAGATaGGTCTGCTCTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLCCVLR*VCSPTA
Trigger: AGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCA...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTGAGTCTCAGTTCTGGTaGGAGCAGTGTTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLESQFW*EQCFGR
Trigger: CCTCCCAAAACACTGCTCTCACCAGAACTGAGACTC...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTTTTGGGAGGCATTTCGTCAACTGCTCACTaGGTTCCTCAAGAGATTTAT +
Preference number: 4 (lower is better)
Translates to: GLYLRSLSSGESSVLGGISSTAH*VPQEIY
Trigger: ATAAATCTCTTGAGGAACTCAGTGAGCAGTTGACGA...AATGCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGTCCTGTCATGCAATGGCTCATTAGTGGCACCAGCCCACCCATAATGCTAACCTGGAAATCACCAGTTTaGGCTTCTGAGATAGGAATG +
Preference number: 4 (lower is better)
Translates to: SPVMQWLISGTSPPIMLTWKSPV*ASEIGM
Trigger: CATTCCTATCTCAGAAGCTCAAACTGGTGATTTCCA...GGTTAGCATTATGGGTGGGCTGGTGCCACTAATGAGCCATTGCATGACAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAGCAAAAAGGGCCAATTaGCCAATCCAAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLAKRAN*PIQERR
Trigger: TCTTCTTTCTTGGATTGGTCAATTGGCCCTTTTTGC...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCGCTAAAAGTAATGAATaGCCGGCTTTTCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: LPQGNNALVWSHSLLGISAKSNE*PAFLHF
Trigger: GAAATGGAGAAAAGCCGGGCATTCATTACTTTTAGC...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAAGGCCTTCCAGACCCTaGTGGCTGGGGAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKRPSRP*WLGRYG
Trigger: ACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCT...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTTGCACCTCCCAAACCTaGAGCTGTCTCCTTACCAGA +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLCTSQT*SCLLTR
Trigger: TCTGGTAAGGAGACAGCTGCAGGTTTGGGAGGTGCA...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTATGCCATAAATCCTATTaGTGTGGCCAAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLCHKSY*CGQVLR
Trigger: TCTCAGAACTTGGCCACACCAATAGGATTTATGGCA...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTGGAACTCTGGAAGACTaGCATCAGCCGATATGGCTG +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLGTLED*HQPIWL
Trigger: CAGCCATATCGGCTGATGCCAGTCTTCCAGAGTTCC...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTTCACCCTACAAGGGATaGGGAACTCTGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLSPYKG*GTLEDW
Trigger: CCAGTCTTCCAGAGTTCCCCATCCCTTGTAGGGTGA...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAAACACAGTCCTCAAGTaGGAAAGTTGGTGTGATTCT +
Preference number: 4 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLNTVLK*ESWCDS
Trigger: AGAATCACACCAACTTTCCCACTTGAGGACTGTGTT...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCGGTGTGGCCAAGTTCTaGGAGAATTTGATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSGVAKF*ENLILS
Trigger: CGAGAGGATCAAATTCTCTCAGAACTTGGCCACACC...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACCTCAAGCAAAAATCATaGCCACTGCAGCACACCAAA +
Preference number: 4 (lower is better)
Translates to: ASADMAEQTAGLESKCVYLKQKS*PLQHTK
Trigger: TTTGGTGTGCTGCAGTGGTCATGATTTTTGCTTGAG...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCGTCTCTGAGGACAGCTaGTCCCTCACGTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVVSEDS*SLTCRA
Trigger: TGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGAC...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCAGACGCTCCCAGCCCTaGAGAAGCACCTGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVRRSQP*RSTCPP
Trigger: TGGCGGACAGGTGCTTCTCCAGGGCTGGGAGCGTCT...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCGTCCTGTCCCGTCCATaGAGAAGCTCCCATTCATTA +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSVLSRP*RSSHSL
Trigger: TAATGAATGGGAGCTTCTCCATGGACGGGACAGGAC...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCAAGCAAAGGAATGCTTaGTGCACCTCCCAAACCTGC +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSKQRNA*CTSQTC
Trigger: GCAGGTTTGGGAGGTGCACCAAGCATTCCTTTGCTT...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCAGAAGGGCCAAGAACCTaGCTCCCAACACTGATTTAC +
Preference number: 4 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSEGPRT*LPTLIY
Trigger: GTAAATCAGTGTTGGGAGTCAGGTTCTTGGCCCTTC...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAGCTCATCAGAAGCCTTaGGCCCCCTCCTGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKAHQKP*APSCKE
Trigger: CTCTTTACAGGAGGGGGCTCAAGGCTTCTGATGAGC...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCCCAGAGCTAGCAGCATaGAACTGTGCTTTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSPELAA*NCAFSV
Trigger: CACACTAAAAGCACAGTTTCATGCTGCTAGCTCTGG...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCCACCTGTCCGCCAGCTaGATCTGGCAGTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVHLSAS*IWQSAH
Trigger: GTGTGCAGACTGCCAGATGCAGCTGGCGGACAGGTG...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTAGTTGGTGTGATTCTTaGCTCTCGGTGGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLSWCDS*LSVGNR
Trigger: TCTATTGCCCACCGAGAGGCAAGAATCACACCAACT...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTACCGTACACATCTCATaGCAACACACAGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLTVHIS*QHTGGI
Trigger: TATGCCTCCTGTGTGTTGGCATGAGATGTGTACGGT...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCAGTCATCGTTCTGCTTaGCTGTCTCGTAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSSHRSA*LSRSLP
Trigger: AGGAAGACTACGAGACAGCCAAGCAGAACGATGACT...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCAGGACGATATGGAGGATaGAGACTGGGGGATTCCATA +
Preference number: 4 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSGRYGG*RLGDSI
Trigger: TATGGAATCCCCCAGTCTCCATCCTCCATATCGTCC...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCAACAATGCCCTAGTGTaGTCTCACAGCCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSNNALV*SHSLLG
Trigger: TCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTT...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCGGCAATCTGCAGCGGTaGTCCAGGGCTACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVGNLQR*SRATQL
Trigger: GAGCTGAGTAGCCCTGGACCACCGCTGCAGATTGCC...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTCTCAAGTGGGAAAGTTaGTGTGATTCTTGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLLKWES*CDSCLS
Trigger: CGAGAGGCAAGAATCACACCAACTTTCCCACTTGAG...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp GGAGGTATGGTCATTATTTTCATGGTTATAACCAAGTaGTCAGTCGTGGCACGTGGAAGTGTAGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GGMVIIFMVITK*SVVARGSVGAE
Trigger: CTCTGCACCTACACTTCCACGTGCCACGACTGACAACTTGGTTATAACCATGAAAATAATGACCATACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAAGAGGGCCCGAAGGCTaGTCCCGGAATTTACTGTTT +
Preference number: 4 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKRGPEG*SRNLLF
Trigger: AAACAGTAAATTCCGGGATCAGCCTTCGGGCCCTCT...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCAGCTAACCAGCCCTACTaGTGCCAAAGAACTATTGAC +
Preference number: 4 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSANQPY*CQRTID
Trigger: GTCAATAGTTCTTTGGCATCAGTAGGGCTGGTTAGC...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTTCATGTGATAGGCAATaGCTTCTCACCCTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLSCDRQ*LLTLSY
Trigger: GTAGGAAAGGGTGAGAAGGCATTGCCTATCACATGA...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCAGTTGGAGCAACTACTaGAAAAAGGGCCAATTGACC +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSSWSNY*KKGQLT
Trigger: GGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACT...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp CTGGCATCAGCCGATATGGCTGAACAGACTGCAGGTTaGGAATCCAAATGTGTCTACAAATGTTCACTGATT +
Preference number: 4 (lower is better)
Translates to: LASADMAEQTAG*ESKCVYKCSLI
Trigger: AATCAGTGAACATTTGTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp CTCTTTTTGGCTCCAGTCACTCACTGTTTAGAACAGTaGGAGCAACTACTGCAAAAAGGGCCAATTGACCAA +
Preference number: 4 (lower is better)
Translates to: LFLAPVTHCLEQ*EQLLQKGPIDQ
Trigger: TTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTGAGTGACTGGAGCCAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCCTTAGCTCCAGCCTCTaGGTCATCGTTCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVLSSSL*VIVLLG
Trigger: GCCAAGCAGAACGATGACTCAGAGGCTGGAGCTAAG...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCCTGCATCTGGCAGTCTaGACACTTGAGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVLHLAV*TLEAGA
Trigger: AGCTCCTGCCTCAAGTGTGCAGACTGCCAGATGCAG...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCTTGCTACTGCAAACCTaGACAACGGGGAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVLLLQT*TTGSPC
Trigger: GCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAA...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTTCAGGCTTAGTGATTTaGTACTGCAAACCTGCACAA +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLSGLVI*YCKPAQ
Trigger: TTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCAAGTGATCTTAAACAGTaGTACACAGAGGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSSDLKQ*YTEEDA
Trigger: GGCATCCTCCTCTGTGTAGCACTGTTTAAGATCACT...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCCAGGTTCATATTCTCTaGTTTGTAGGAAAGAATTCA +
Preference number: 4 (lower is better)
Translates to: KSTSQALQIMVASRRSHFQVHIL*FVGKNS
Trigger: TGAATTCTTTCCTACAAACCAGAGAATATGAACCTG...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCATGTAGGTGCAGAGAGTaGACTGTCATACAACACACA +
Preference number: 4 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSCRCRE*TVIQHT
Trigger: TGTGTGTTGTATGACAGTCCACTCTCTGCACCTACA...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCACCAGTTTGAGCTTCTaGGATAGGAATGTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSTSLSF*DRNVFC
Trigger: ACAAAAGACATTCCTATCTCAGAAGCTCAAACTGGT...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAGTGAGAGCAGTGTTTTaGGAGGCATTGTGTGAGACA +
Preference number: 4 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKVRAVF*EALCET
Trigger: TGTCTCACACAATGCCTCCCAAAACACTGCTCTCAC...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTTCTCATTTAAGAGAATaGGAGGCCAGAAGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLSHLRE*EARRSK
Trigger: TTTGCTTCTTCTGGCCTCCCATTCTCTTAAATGAGA...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCCTGGTATTTCCTCCATaGTTTCATTACGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSLVFPP*FHYVPT
Trigger: TGTTGGAACGTAATGAAACCATGGAGGAAATACCAG...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp TACCAGTTACCACTGGAACTTGGGGTTTTAACTAATTaGCTCCTGGATTCAAGAGCTTCCTACTCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: YQLPLELGVLTN*LLDSRASYSKV
Trigger: GACTTTAGAGTAGGAAGCTCTTGAATCCAGGAGCAAATTAGTTAAAACCCCAAGTTCCAGTGGTAACTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAATGCCAAAGAACTATTaGCCTCGTCAACTGCTCACT +
Preference number: 4 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKMPKNY*PRQLLT
Trigger: AGTGAGCAGTTGACGAGGTCAATAGTTCTTTGGCAT...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAATTGACCTCGTCAACTaGTCACTGAGTTCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKIDLVN*SLSSSR
Trigger: TCTTGAGGAACTCAGTGAGCAGTTGACGAGGTCAAT...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCACCTCAGTTTCCATTTTaGTTATACCAGTTACCACTG +
Preference number: 4 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSPQFPF*LYQLPL
Trigger: CAGTGGTAACTGGTATAAGCAAAATGGAAACTGAGG...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAACCACTTAGAACCCTTTaGACAATTTTAGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKPLRTL*TILGLL
Trigger: GAGCAGCCCTAAAATTGTCCAAAGGGTTCTAAGTGG...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR TCA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCAAAGGCAAGTCTCTTTTaGTCCTTGAAGATATTCTCT +
Preference number: 4 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSKASLF*SLKIFS
Trigger: AGAGAATATCTTCAAGGATCAAAAGAGACTTGCCTT...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
3UTR CAA 72 bp TCCATAAACATGGAACCTCAAGAGAAGTGTCTATGTTaGCAGACTTCTCAAGCAAAAATCATGACCACTGCA +
Preference number: 4 (lower is better)
Translates to: SINMEPQEKCLC*QTSQAKIMTTA
Trigger: TGCAGTGGTCATGATTTTTGCTTGAGAAGTCTGCAAACATAGACACTTCTCTTGAGGTTCCATGTTTATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCCCCAGTGTTCATGATTaGAGAATTCCCAATAGCACA +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVPSVHD*RIPNST
Trigger: TGTGCTATTGGGAATTCTCCAATCATGAACACTGGG...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR GCA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCAGAAGTGTCTATGTTTaGAGACTTCTCAAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVRSVYV*RLLKQK
Trigger: TTTTTGCTTGAGAAGTCTGCAAACATAGACACTTCT...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS GCA 90 bp CTCTCCACCCTCCCTGGCCTACCCTGCTGCAAACTTCCCCCTCACTaGTTGGGGAGAGGCAGAGACAGGCCAGGGCCACGAGACGGACCG +
Preference number: 5 (lower is better)
Translates to: LSTLPGLPCCKLPPH*LGRGRDRPGPRDGP
Trigger: CGGTCCGTCTCGTGGCCCTGGCCTGTCTCTGCCTCTCCCCAAGCAGTGAGGGGGAAGTTTGCAGCAGGGTAGGCCAGGGAGGGTGGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558139.1
CDS CCA 90 bp CCACCCTCCCTGGCCTACCCTGCTGCAAACTTCCCCCTCACTGCTTaGGGAGAGGCAGAGACAGGCCAGGGCCACGAGACGGACCGTTCT +
Preference number: 5 (lower is better)
Translates to: PPSLAYPAANFPLTA*GEAETGQGHETDRS
Trigger: AGAACGGTCCGTCTCGTGGCCCTGGCCTGTCTCTGCCTCTCCCCAAGCAGTGAGGGGGAAGTTTGCAGCAGGGTAGGCCAGGGAGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558139.1
CDS-3UTR CAA 90 bp CCTGTCTCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCACGTGCCGGGCAGGCTaGGGGGAGTTCTTGTATGCA +
Preference number: 5 (lower is better)
Translates to: PVSEDSCSLTCRAGLGEFTCRAG*GEFLYA
Trigger: TGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGT...GAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS TCA 90 bp CTGCAGAGCTCTCCTTCTCCTGCTTGCTGCTGCCCCGGCTCCTCTTaGCGCTCTTATAGAACTGCCCCCAGCGGTGCCGCCCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: LQSSPSPACCCPGSS*RSYRTAPSGAALHP
Trigger: AGGATGCAGGGCGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCAAGCAGGAGAAGGAGAGCTCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCATTCGGCAGGCCGTGCATTTaGTGCCGAAGCGCCGTTCTG +
Preference number: 5 (lower is better)
Translates to: DSCSLTCRAGLGEFLYAFGRPCI*CRSAVL
Trigger: CAGAACGGCGCTTCGGCACAAAATGCACGGCCTGCC...GAATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS GCA 90 bp GGGTCCCCCAGCCATGGCTCTCAGCGTCTGGCTTACTCCCTGCCCTaGATGCGCAATGATGCCCAAATTACTGTCCACCGTGTAATCCAG +
Preference number: 5 (lower is better)
Translates to: GSPSHGSQRLAYSLP*MRNDAQITVHRVIQ
Trigger: CTGGATTACACGGTGGACAGTAATTTGGGCATCATTGCGCATGCAGGGCAGGGAGTAAGCCAGACGCTGAGAGCCATGGCTGGGGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS CCA 90 bp CCCATTGAGCAAAGGAGCGTGGGATGGCAGGGACGATATGGAGGATaGAGACTGGGGGATTCCATAGGGGCTCCCATCCCTCAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PIEQRSVGWQGRYGG*RLGDSIGAPIPQVL
Trigger: CAGGACTTGAGGGATGGGAGCCCCTATGGAATCCCCCAGTCTCCATCCTCCATATCGTCCCTGCCATCCCACGCTCCTTTGCTCAATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CCTGTCTCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCGGCTTGGGGGAGTTCTaGTATGCATTCTTTAATGTC +
Preference number: 5 (lower is better)
Translates to: PVSEDSCSLTCRAGLGEFGLGEF*YAFFNV
Trigger: GACATTAAAGAATGCATACAAGAACTCCCCCAAGCC...GAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS GCA 90 bp GCAGGCTTGGGGGAGTTCTTGTATGCATTCTTTAATGTCTCCAGCTaGTTGGCTGTGATGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: AGLGEFLYAFFNVSS*LAVMVVRGRLAPAS
Trigger: AGAGGCTGGAGCTAAGCGGCCCCGGACCACCATCACAGCCAAGCAGCTGGAGACATTAAAGAATGCATACAAGAACTCCCCCAAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263726.4
ENST00000561113.1
CDS CCA 90 bp ACTGTCCACCGTGTAATCCAGCCCATTGAGCAAAGGAGCGTGGGATaGCAGGGACGATATGGAGGATGGAGACTGGGGGATTCCATAGGG +
Preference number: 5 (lower is better)
Translates to: TVHRVIQPIEQRSVG*QGRYGGWRLGDSIG
Trigger: CCCTATGGAATCCCCCAGTCTCCATCCTCCATATCGTCCCTGCCATCCCACGCTCCTTTGCTCAATGGGCTGGATTACACGGTGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCACGTGCCGGGCAGGCTaGGGGGAGTTCTTGTATGCA +
Preference number: 5 (lower is better)
Translates to: LPQGNNALVWSHSLLGISTCRAG*GEFLYA
Trigger: TGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGT...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGACCTATCACAGTCACCTaGTGCTACCAAAGCACTGAG +
Preference number: 5 (lower is better)
Translates to: PWDCSPRHGRCPASNPERPITVT*CYQSTE
Trigger: CTCAGTGCTTTGGTAGCACAAGGTGACTGTGATAGG...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGAGTGTTTTGGGAGGCATaGTGTGAGACACACCAGTTG +
Preference number: 5 (lower is better)
Translates to: PWDCSPRHGRCPASNPERVFWEA*CETHQL
Trigger: CAACTGGTGTGTCTCACACAATGCCTCCCAAAACAC...TCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCATTCGCCGTTCTGACTTACTaGAAGAAGTCCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: DSCSLTCRAGLGEFLYAFAVLTY*KKSSLQ
Trigger: CTGCAAGGAGGACTTCTTCAAGTAAGTCAGAACGGC...GAATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561113.1
CDS-3UTR CAA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCCTGTTTCCAGTCCCTTaGATCTCGCTCTCCGGGGTT +
Preference number: 5 (lower is better)
Translates to: LPQGNNALVWSHSLLGISLFPVP*ISLSGV
Trigger: AACCCCGGAGAGCGAGATCAAAGGGACTGGAAACAG...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCAATCTCCGGGAGCCCCTaGACAGCCCCTTCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSISGSP*TAPSAG
Trigger: CCCCGCGGAAGGGGCTGTCAAGGGGCTCCCGGAGAT...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp TCACCTGTGCTCTGCCTCCCTAAGCAAAGGAATGCTTGGTGCACCTCCCAAACCCAAGTCCTGATAGGATaGTCCTGTCCCGTCCATGGA +
Preference number: 5 (lower is better)
Translates to: SPVLCLPKQRNAWCTSQTQVLIG*SCPVHG
Trigger: TCCATGGACGGGACAGGACAATCCTATCAGGACTTG...GGTTTGGGAGGTGCACCAAGCATTCCTTTGCTTAGGGAGGCAGAGCACAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTACTCAGGCTTAGTGATTaGCTACTGCAAACCTGCACA +
Preference number: 5 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLLRLSD*LLQTCT
Trigger: TGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGAG...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp TCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCATTCCTCACATGGCATTaGTGTCTTCCTCCCCACCCC +
Preference number: 5 (lower is better)
Translates to: SGLVICYCKPAQRGVPAPFLTWH*CLPPHP
Trigger: GGGGTGGGGAGGAAGACACAAATGCCATGTGAGGAA...TGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCACTAAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTACCTGTAAAGAGGCAGTaGGAAATCACCAGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLPVKRQ*EITSLS
Trigger: GCTCAAACTGGTGATTTCCAACTGCCTCTTTACAGG...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAATGGTTATAACCAAGTaGTCAGTCGTGGCACGTGGA +
Preference number: 5 (lower is better)
Translates to: AKPLSRTAGERPNKPVSLMVITK*SVVARG
Trigger: TCCACGTGCCACGACTGACAACTTGGTTATAACCAT...TAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCTTTGTGCCGAAGCGCTaGAAGAAGTCCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LPQGNNALVWSHSLLGISFVPKR*KKSSLQ
Trigger: CTGCAAGGAGGACTTCTTCAAGCGCTTCGGCACAAA...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CAACAAGCCAGTGTCCCTAGAGCTCTAGGCCATTACCCCCTGTGCTGTGTTCTGAAAACTGTCCTCCAATaGAGTCAGCTAGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: QQASVPRALGHYPLCCVLKTVLQ*SQLGQQ
Trigger: CTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTT...CAGAACACAGCACAGGGGGTAATGGCCTAGAGCTCTAGGGACACTGGCTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCCTCGTAAAGCGGGGGTaGGCCTTGCTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSLVKRG*ALLWPQ
Trigger: CTGAGGCCAGAGCAAGGCCAACCCCCGCTTTACGAG...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTGGTGCACATCCCAGGTaGAGACGCTGTTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLGAHPR*RRCCCS
Trigger: GCTGCAGCAACAGCGTCTCAACCTGGGATGTGCACC...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCGGGTACGCTATAAAATaGGTCAGAGAAGAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: KSTSQALQIMVASRRSHFGYAIK*VREEGP
Trigger: CGGGCCCTCTTCTCTGACCAATTTTATAGCGTACCC...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTATTGCATAGCAAGTCCTaGAAGGGCCAAGAACCTGAC +
Preference number: 5 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLLHSKS*KGQEPD
Trigger: GTCAGGTTCTTGGCCCTTCAAGGACTTGCTATGCAA...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCTACAACACACAGCCTTaGCTCATCAGAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LPQGNNALVWSHSLLGISYNTQP*LIRSLE
Trigger: CTCAAGGCTTCTGATGAGCAAAGGCTGTGTGTTGTA...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTACTGAGCTCTCTCTTTTaGGCTCCAGTCACTCACTGT +
Preference number: 5 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLLSSLF*APVTHC
Trigger: ACAGTGAGTGACTGGAGCCAAAAAGAGAGAGCTCAG...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCCCTGAACCTGCTTGTTaGGCCGAACACAGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: KSTSQALQIMVASRRSHFPEPAC*AEHSPQ
Trigger: TTGAGGACTGTGTTCGGCCAAACAAGCAGGTTCAGG...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACAGGGGATCTGGGGCTTaGAGGTCTGATTGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: ASADMAEQTAGLESKCVYRGSGA*RSDCKL
Trigger: GAGCTTGCAATCAGACCTCAAAGCCCCAGATCCCCT...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS CCA 90 bp AAAAGGAGGATGATCCATTTCATCGAGCCAAGAGCCTGGGCTAGTTaGAAAGTCGGGATAGCCTACACTGCTTCCTGTGGAGATGTCAGA +
Preference number: 5 (lower is better)
Translates to: KRRMIHFIEPRAWAS*KVGIAYTASCGDVR
Trigger: TCTGACATCTCCACAGGAAGCAGTGTAGGCTATCCCGACTTTCCAACTAGCCCAGGCTCTTGGCTCGATGAAATGGATCATCCTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCGAACAGACTGCAGGTTaGGAATCCAAATGTGTCTAC +
Preference number: 5 (lower is better)
Translates to: LPQGNNALVWSHSLLGISEQTAG*ESKCVY
Trigger: GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTC...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAGACATGCCTAAGTCTTaGCAGTCCTCAAAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLDMPKS*QSSKGD
Trigger: GTCACCTTTTGAGGACTGCAAAGACTTAGGCATGTC...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAGATGCCAAAGAACTATaGACCTCGTCAACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLDAKEL*TSSTAH
Trigger: GTGAGCAGTTGACGAGGTCAATAGTTCTTTGGCATC...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTAGGAATTTGCCTGAGGTaGCATAGCAAGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLGICLR*HSKSLK
Trigger: CTTCAAGGACTTGCTATGCAACCTCAGGCAAATTCC...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCGTGGATGGGATGGCTTaGCTGAGCTCTCTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: KSTSQALQIMVASRRSHFVDGMA*LSSLFL
Trigger: CAAAAAGAGAGAGCTCAGCAAAGCCATCCCATCCAC...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CAACAAGCCAGTGTCCCTAGAGCTCTAGGCCATTACCCCCTGTGCTGTGTTCTGAGCGGAGGACTTCCATaGAAAATAATGGAAATTCAC +
Preference number: 5 (lower is better)
Translates to: QQASVPRALGHYPLCCVLSGGLP*KIMEIH
Trigger: GTGAATTTCCATTATTTTCAATGGAAGTCCTCCGCT...CAGAACACAGCACAGGGGGTAATGGCCTAGAGCTCTAGGGACACTGGCTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTATTCAGAGGGGTAGACTaGCAAGCTCATCTAAACCAA +
Preference number: 5 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLFRGVD*QAHLNQ
Trigger: TTGGTTTAGATGAGCTTGCAAGTCTACCCCTCTGAA...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CAGGCCTTCCAGACCCTGCTGGCTGGGGAGGTATGGTCATTATTTTCATGGTTATTTTCATCTGGTTCATaGCCCAGCAGAGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: QAFQTLLAGEVWSLFSWLFSSGS*PSRAFS
Trigger: AGAAAAGGCTCTGCTGGGCAATGAACCAGATGAAAA...TAACCATGAAAATAATGACCATACCTCCCCAGCCAGCAGGGTCTGGAAGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCGGGGTTTTAACTAATTaGCTCCTGGATTCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LPQGNNALVWSHSLLGISGVLTN*LLDSRA
Trigger: AGCTCTTGAATCCAGGAGCAAATTAGTTAAAACCCC...GCTGATTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS CCA 90 bp AGAAGTTTAAAAAGGAGGATGATCCATTTCATCGAGCCAAGAGCCTaGGCTAGTTGGAAAGTCGGGATAGCCTACACTGCTTCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: RSLKRRMIHFIEPRA*ASWKVGIAYTASCG
Trigger: TCCACAGGAAGCAGTGTAGGCTATCCCGACTTTCCAACTAGCCCAGGCTCTTGGCTCGATGAAATGGATCATCCTCCTTTTTAAACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp TTGAAAATAATGGAAATTCACATTGGCGTACTTTCGATCCTTAAAAGGCAAGTCACAAAGTCCTGGGCCTaGCGGACCACCTGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: LKIMEIHIGVLSILKRQVTKSWA*RTTWVG
Trigger: CCCAACCCAGGTGGTCCGCAAGGCCCAGGACTTTGT...GACTTGCCTTTTAAGGATCGAAAGTACGCCAATGTGAATTTCCATTATTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp AAGTCGACCAGCCAGGCACTGCAGATAATGGTTGCCTCTAGAAGGTCTCATTTCTGCAAAAAGGGCCAATaGACCAATCCAAGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: KSTSQALQIMVASRRSHFCKKGQ*TNPRKK
Trigger: CTTCTTTCTTGGATTGGTCAATTGGCCCTTTTTGCA...GAAATGAGACCTTCTAGAGGCAACCATTATCTGCAGTGCCTGGCTGGTCGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp CACTGTTTAGAACAGTTGGAGCAACTACTGCAAAAAGGGCCAATTGACCAATCCGGCTTGGGGGAGTTCTaGTATGCATTCTTTAATGTC +
Preference number: 5 (lower is better)
Translates to: HCLEQLEQLLQKGPIDQSGLGEF*YAFFNV
Trigger: GACATTAAAGAATGCATACAAGAACTCCCCCAAGCC...GGATTGGTCAATTGGCCCTTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACGAGAAGTGTCTATGTTaGCAGACTTCTCAAGCAAAA +
Preference number: 5 (lower is better)
Translates to: ASADMAEQTAGLESKCVYEKCLC*QTSQAK
Trigger: TTTTGCTTGAGAAGTCTGCAAACATAGACACTTCTC...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GCATCAGCCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACCACTGTTTAGAACAGTaGGAGCAACTACTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: ASADMAEQTAGLESKCVYHCLEQ*EQLLQK
Trigger: TTTTTGCAGTAGTTGCTCCAACTGTTCTAAACAGTG...GTAGACACATTTGGATTCCAAACCTGCAGTCTGTTCAGCCATATCGGCTGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp GAAATGACCAAAACTGTCCTCCAATTGAGTCAGCTAGGACAGCAGAGAAAGCTTCCCTCAGTTTCCATTTaGCTTATACCAGTTACCACT +
Preference number: 5 (lower is better)
Translates to: EMTKTVLQLSQLGQQRKLPSVSI*LIPVTT
Trigger: AGTGGTAACTGGTATAAGCAAAATGGAAACTGAGGG...AAGCTTTCTCTGCTGTCCTAGCTGACTCAATTGGAGGACAGTTTTGGTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp AACACACAGGAGGCATATACAAACAAACGCACCAGCTTCTGTTTTCCAAAGTCACCCAATAGCACAGAATaGGCTAGGATTAACACAACA +
Preference number: 5 (lower is better)
Translates to: NTQEAYTNKRTSFCFPKSPNSTE*ARINTT
Trigger: TGTTGTGTTAATCCTAGCCAATTCTGTGCTATTGGG...TGACTTTGGAAAACAGAAGCTGGTGCGTTTGTTTGTATATGCCTCCTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS-3UTR CAA 90 bp AGAGCCTTTTCTCCTGTGTATTTTAAGCAGCCTGCTAAGAAGGGTGTATTTAAAAATGAAAACCACCTCTaGCCATCAGAGTCAATGATA +
Preference number: 5 (lower is better)
Translates to: RAFSPVYFKQPAKKGVFKNENHL*PSESMI
Trigger: TATCATTGACTCTGATGGCAAGAGGTGGTTTTCATT...TTTAAATACACCCTTCTTAGCAGGCTGCTTAAAATACACAGGAGAAAAGGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS GCA 72 bp CTCCCTGGCCTACCCTGCTGCAAACTTCCCCCTCACTaGTTGGGGAGAGGCAGAGACAGGCCAGGGCCACGA +
Preference number: 6 (lower is better)
Translates to: LPGLPCCKLPPH*LGRGRDRPGPR
Trigger: TCGTGGCCCTGGCCTGTCTCTGCCTCTCCCCAAGCAGTGAGGGGGAAGTTTGCAGCAGGGTAGGCCAGGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558139.1
CDS GCA 72 bp CCCTTGACAGCCCCTTCCGCGGGGACAGTCGCACTCTaGATCATCTCGGAGCGAAAGCCAGCGAGTCGCAGT +
Preference number: 6 (lower is better)
Translates to: PLTAPSAGTVAL*IISERKPASRS
Trigger: ACTGCGACTCGCTGGCTTTCGCTCCGAGATGATGCAGAGTGCGACTGTCCCCGCGGAAGGGGCTGTCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263726.4
ENST00000558139.1
CDS GCA 72 bp ACGCTCCCAGCCCTGGAGAAGCACCTGTCCGCCAGCTaGATCTGGCAGTCTGCACACTTGAGGCAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: TLPALEKHLSAS*IWQSAHLRQEL
Trigger: CAGCTCCTGCCTCAAGTGTGCAGACTGCCAGATGCAGCTGGCGGACAGGTGCTTCTCCAGGGCTGGGAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263726.4
ENST00000558139.1
ENST00000561113.1
CDS CCA 72 bp TACCTGCCCCTCCCAGAGTGGACTCTCCACCCTCCCTaGCCTACCCTGCTGCAAACTTCCCCCTCACTGCTT +
Preference number: 6 (lower is better)
Translates to: YLPLPEWTLHPP*PTLLQTSPSLL
Trigger: AAGCAGTGAGGGGGAAGTTTGCAGCAGGGTAGGCCAGGGAGGGTGGAGAGTCCACTCTGGGAGGGGCAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558139.1
CDS TCA 72 bp ACCTGTCCGCCAGCTGCATCTGGCAGTCTGCACACTTaGGGCAGGAGCTGTGCCAGTGTCTGTCCAGGACCT +
Preference number: 6 (lower is better)
Translates to: TCPPAASGSLHT*GRSCASVCPGP
Trigger: AGGTCCTGGACAGACACTGGCACAGCTCCTGCCTCAAGTGTGCAGACTGCCAGATGCAGCTGGCGGACAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263726.4
ENST00000558139.1
ENST00000561113.1
CDS CCA 72 bp ATAATTAAAACCCCAAGCAGGCCGCTGGAGTCACGGTaGAAGCCGGGCCCTCCGCTTCTCAGGGAGGACTCC +
Preference number: 6 (lower is better)
Translates to: IIKTPSRPLESR*KPGPPLLREDS
Trigger: GGAGTCCTCCCTGAGAAGCGGAGGGCCCGGCTTCCACCGTGACTCCAGCGGCCTGCTTGGGGTTTTAATTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263726.4
ENST00000558139.1
CDS CCA 72 bp TTCCTGTGGAGATGTCAGAGGTGGGTCCCCCAGCCATaGCTCTCAGCGTCTGGCTTACTCCCTGCCCTGCAT +
Preference number: 6 (lower is better)
Translates to: FLWRCQRWVPQP*LSASGLLPALH
Trigger: ATGCAGGGCAGGGAGTAAGCCAGACGCTGAGAGCCATGGCTGGGGGACCCACCTCTGACATCTCCACAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS CCA 72 bp CAAAGGAGCGTGGGATGGCAGGGACGATATGGAGGATaGAGACTGGGGGATTCCATAGGGGCTCCCATCCCT +
Preference number: 6 (lower is better)
Translates to: QRSVGWQGRYGG*RLGDSIGAPIP
Trigger: AGGGATGGGAGCCCCTATGGAATCCCCCAGTCTCCATCCTCCATATCGTCCCTGCCATCCCACGCTCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS TCA 72 bp GGTCTAGAGGCTGAACCTCTGGCAGTGATGGGCCAGTaGTCAGAAGGGGGACCTCAACAAGGGGCATCCTCT +
Preference number: 6 (lower is better)
Translates to: GLEAEPLAVMGQ*SEGGPQQGASS
Trigger: AGAGGATGCCCCTTGTTGAGGTCCCCCTTCTGATCACTGGCCCATCACTGCCAGAGGTTCAGCCTCTAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558139.1
CDS GCA 72 bp GTTTCCAGTCCCTTTGATCTCGCTCTCCGGGGTTGGTaGACATCCCAGGTTGAGACGCTGTTGCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: VSSPFDLALRGW*TSQVETLLLQL
Trigger: GAGCTGCAGCAACAGCGTCTCAACCTGGGATGTGCACCAACCCCGGAGAGCGAGATCAAAGGGACTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS CCA 72 bp TCTGTTTCCAGTCCCTTTGATCTCGCTCTCCGGGGTTaGTGCACATCCCAGGTTGAGACGCTGTTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SVSSPFDLALRG*CTSQVETLLLQ
Trigger: CTGCAGCAACAGCGTCTCAACCTGGGATGTGCACCAACCCCGGAGAGCGAGATCAAAGGGACTGGAAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS CCA 72 bp CGTGTAATCCAGCCCATTGAGCAAAGGAGCGTGGGATaGCAGGGACGATATGGAGGATGGAGACTGGGGGAT +
Preference number: 6 (lower is better)
Translates to: RVIQPIEQRSVG*QGRYGGWRLGD
Trigger: ATCCCCCAGTCTCCATCCTCCATATCGTCCCTGCCATCCCACGCTCCTTTGCTCAATGGGCTGGATTACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS TCA 72 bp TCAGCGTCTGGCTTACTCCCTGCCCTGCATGCGCAATaGTGCCCAAATTACTGTCCACCGTGTAATCCAGCC +
Preference number: 6 (lower is better)
Translates to: SASGLLPALHAQ*CPNYCPPCNPA
Trigger: GGCTGGATTACACGGTGGACAGTAATTTGGGCATCATTGCGCATGCAGGGCAGGGAGTAAGCCAGACGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS TCA 72 bp CCTGCCCCATGCAGAGATCAAATGAGGTCTAGAGGCTaGACCTCTGGCAGTGATGGGCCAGTGATCAGAAGG +
Preference number: 6 (lower is better)
Translates to: PAPCRDQMRSRG*TSGSDGPVIRR
Trigger: CCTTCTGATCACTGGCCCATCACTGCCAGAGGTTCAGCCTCTAGACCTCATTTGATCTCTGCATGGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558139.1
CDS CCA 72 bp CTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTaGGGGAGTTCTTGTATGCATTCTTTAATGTCTCCA +
Preference number: 6 (lower is better)
Translates to: LRTAAPSRAGQA*GSSCMHSLMSP
Trigger: TGGAGACATTAAAGAATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263726.4
ENST00000561113.1
CDS CAA 72 bp TCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTaGGGGGAGTTCTTGTATGCATTCTTTAATGTCTCC +
Preference number: 6 (lower is better)
Translates to: SEDSCSLTCRAG*GEFLYAFFNVS
Trigger: GGAGACATTAAAGAATGCATACAAGAACTCCCCCAAGCCTGCCCGGCACGTGAGGGAGCAGCTGTCCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263726.4
ENST00000561113.1
CDS GCA 72 bp GGGGAGTTCTTGTATGCATTCTTTAATGTCTCCAGCTaGTTGGCTGTGATGGTGGTCCGGGGCCGCTTAGCT +
Preference number: 6 (lower is better)
Translates to: GEFLYAFFNVSS*LAVMVVRGRLA
Trigger: AGCTAAGCGGCCCCGGACCACCATCACAGCCAAGCAGCTGGAGACATTAAAGAATGCATACAAGAACTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263726.4
ENST00000561113.1
CDS CAA 72 bp TCCATAGGGGCTCCCATCCCTCAAGTCCTGATAGGATaGTCCTGTCCCGTCCATGGAGAAGCTCCCATTCAT +
Preference number: 6 (lower is better)
Translates to: SIGAPIPQVLIG*SCPVHGEAPIH
Trigger: ATGAATGGGAGCTTCTCCATGGACGGGACAGGACAATCCTATCAGGACTTGAGGGATGGGAGCCCCTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS CCA 72 bp ATGATCCATTTCATCGAGCCAAGAGCCTGGGCTAGTTaGAAAGTCGGGATAGCCTACACTGCTTCCTGTGGA +
Preference number: 6 (lower is better)
Translates to: MIHFIEPRAWAS*KVGIAYTASCG
Trigger: TCCACAGGAAGCAGTGTAGGCTATCCCGACTTTCCAACTAGCCCAGGCTCTTGGCTCGATGAAATGGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS CCA 72 bp AAAAGGAGGATGATCCATTTCATCGAGCCAAGAGCCTaGGCTAGTTGGAAAGTCGGGATAGCCTACACTGCT +
Preference number: 6 (lower is better)
Translates to: KRRMIHFIEPRA*ASWKVGIAYTA
Trigger: AGCAGTGTAGGCTATCCCGACTTTCCAACTAGCCCAGGCTCTTGGCTCGATGAAATGGATCATCCTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263726.4
CDS TCA 72 bp CACGTTGCCATAAATCCTATTGGTGTGGCCAAGTTCTaGGAGAATTTGATCCTCTCGGAAGCTCAGCTCACT +
Preference number: 6 (lower is better)
Translates to: HVAINPIGVAKF*ENLILSEAQLT
Trigger: AGTGAGCTGAGCTTCCGAGAGGATCAAATTCTCTCAGAACTTGGCCACACCAATAGGATTTATGGCAACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263726.4