Pregenerated sensors for LHX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000106689Ensembl transcript IDs: ENST00000373615.9, ENST00000446480.5, ENST00000488674.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGGGCTGAGCGAGGCGTTGGAGAGCTCCGAGGCCGGGCCCGATaGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTGTCCACGCC | + |
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Preference number: 1 (lower is better) Translates to: GGAERGVGELRGRAR*RPCLQRRVCRLVHA Trigger: GGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGAGCTCTCCAACGCCTCGCTCAGCCCCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR GCA 90 bp | GAGGCGTTGGAGAGCTCCGAGGCCGGGCCCGATGGCGTCCCTGTCTaGAGCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: EALESSEAGPDGVPV*SAASVDLSTPVFSC Trigger: GCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGAGCTCTCCAACGCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR GCA 90 bp | GTCTGCAGCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCTaGCGTAAGAGGTTGCGCCTGAACTTGGCTCGGGCGTTCTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: VCSAASVDLSTPVFS*RKRLRLNLARAFWN Trigger: GTTCCAGAACGCCCGAGCCAAGTTCAGGCGCAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR TCA 90 bp | AAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTaGCACAAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: KLFVVFPRSVHKTVQ*HKCCVAGRSSKLFL Trigger: GAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAAATAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| 3UTR CAA 90 bp | GCCGGGCCCGATGGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTaGTCCACGCCCGTGTTTTCCTGCCGTAAGAGGTTGCGCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: AGPDGVPVCSAASVD*STPVFSCRKRLRLN Trigger: GTTCAGGCGCAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCGAGGCCGGGCCCGATGGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTTTTTTAAAGAAATTGTaGGGTGAGGGGTTGCGAGTC | + |
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Preference number: 2 (lower is better) Translates to: LRGRARWRPCLQRRVCRLFLKKL*GEGLRV Trigger: GACTCGCAACCCCTCACCCCACAATTTCTTTAAAAA...AAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGAG 60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCGCGTGCTGGAGGGGCTaGGCGAGGCGTTGGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCACWRG*ARRWRA Trigger: AGCTCTCCAACGCCTCGCTCAGCCCCTCCAGCACGC...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGGCACGTGGCAGTCTTTaGAAATACAGAAGCTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LQVDLPSCSSVHTAALAGARGSL*KYRSSS Trigger: GCTAGAGCTTCTGTATTTTCAAAGACTGCCACGTGC...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGATGGCGTCCCTGTCTaGAGCGCCGCGTCTGTCGAC | + |
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Preference number: 2 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLDGVPV*SAASVD Trigger: GTCGACAGACGCGGCGCTGCAGACAGGGACGCCATC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCTTGGCTCGGGCGTTCTaGAACCAGACCTTGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCLARAF*NQTLLP Trigger: TGGAAGCAAGGTCTGGTTCCAGAACGCCCGAGCCAA...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAACGAGGCCGGGCCCGATaGCGTCCCTGTCTGCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: RSSSQLKLFVVFPRSVHKRGRAR*RPCLQR Trigger: GCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCG...TTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAACTCGGTCCACACCGCTaGATTAGCCGGGCGCACACT | + |
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Preference number: 2 (lower is better) Translates to: HPKYGDKTVFLRHVAVFELGPHR*ISRAHT Trigger: AGTGTGCGCCCGGCTAATGCAGCGGTGTGGACCGAG...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| 3UTR CAA 90 bp | TTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTaGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: FLAQSTKLYSDTNVV*QVDLPSCSSVHTAA Trigger: TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTCTGGAACCAGACCTTaGTTCCAGGAGAGTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LLFFLAQSTKLYSDTNVVSGTRP*FQESLG Trigger: TCCCAGACTCTCCTGGAAGCAAGGTCTGGTTCCAGA...CACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR CCA 90 bp | GACACAAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCTTTTTAAAGAAATTGTaGGGTGAGGGGTTGCGAGTC | + |
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Preference number: 2 (lower is better) Translates to: DTNVVLQVDLPSCSSVHTFLKKL*GEGLRV Trigger: GACTCGCAACCCCTCACCCCACAATTTCTTTAAAAA...GGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAGTAAGAGGTTGCGCCTaGACTTGGCTCGGGCGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LNYLLFFLAQSTKLYSDTVRGCA*TWLGRS Trigger: AGAACGCCCGAGCCAAGTTCAGGCGCAACCTCTTAC...TGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATTTTTAAAGAAATTGTaGGGTGAGGGGTTGCGAGTC | + |
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Preference number: 2 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLFLKKL*GEGLRV Trigger: GACTCGCAACCCCTCACCCCACAATTTCTTTAAAAA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
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| 3UTR GCA 72 bp | GAGAGCTCCGAGGCCGGGCCCGATGGCGTCCCTGTCTaGAGCGCCGCGTCTGTCGACTTGTCCACGCCCGTG | + |
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Preference number: 3 (lower is better) Translates to: ESSEAGPDGVPV*SAASVDLSTPV Trigger: CACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGAGCTCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR TCA 72 bp | TCAAGTCTGTCAGGGTGGTGGGCGTGCTGGAGGGGCTaGGCGAGGCGTTGGAGAGCTCCGAGGCCGGGCCCG | + |
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Preference number: 3 (lower is better) Translates to: SSLSGWWACWRG*ARRWRAPRPGP Trigger: CGGGCCCGGCCTCGGAGCTCTCCAACGCCTCGCTCAGCCCCTCCAGCACGCCCACCACCCTGACAGACTTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR CCA 72 bp | GAGCGAGGCGTTGGAGAGCTCCGAGGCCGGGCCCGATaGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTT | + |
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Preference number: 3 (lower is better) Translates to: ERGVGELRGRAR*RPCLQRRVCRL Trigger: AAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGAGCTCTCCAACGCCTCGCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR GCA 72 bp | GCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCTaGCGTAAGAGGTTGCGCCTGAACTTGGCTCGGGCG | + |
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Preference number: 3 (lower is better) Translates to: AASVDLSTPVFS*RKRLRLNLARA Trigger: CGCCCGAGCCAAGTTCAGGCGCAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGGGGCTGAGCGAGGCGTaGGAGAGCTCCGAGGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: LQVDLPSCSSVHTAALAGGLSEA*ESSEAG Trigger: CCCGGCCTCGGAGCTCTCCAACGCCTCGCTCAGCCC...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR GCA 72 bp | TTTGTGAGGGGCTGTGAGGCTCATGGCCCTCCAGGTTaGCAGGCACAGAAGTTAAGACGGACGTCACAGTTG | + |
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Preference number: 3 (lower is better) Translates to: FVRGCEAHGPPG*QAQKLRRTSQL Trigger: CAACTGTGACGTCCGTCTTAACTTCTGTGCCTGGCAACCTGGAGGGCCATGAGCCTCACAGCCCCTCACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR TCA 72 bp | TGCGAGTCATTAGAAAAGGTTGGTAAGAGTCGTTTGTaGGGGGCTGTGAGGCTCATGGCCCTCCAGGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: CESLEKVGKSRL*GAVRLMALQVA Trigger: GGCAACCTGGAGGGCCATGAGCCTCACAGCCCCTCACAAACGACTCTTACCAACCTTTTCTAATGACTCGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR CAA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAAAGGTTGCGCCTGAACTaGGCTCGGGCGTTCTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: HPKYGDKTVFLRHVAVFERLRLN*ARAFWN Trigger: GTTCCAGAACGCCCGAGCCAAGTTCAGGCGCAACCT...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCGGTAGATCTTCCAAGTaGTTCCTCGGTCCACACCGC | + |
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Preference number: 3 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCGRSSK*FLGPHR Trigger: GCGGTGTGGACCGAGGAACAACTTGGAAGATCTACC...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGGCCAACTTAAATTATTaGTTGTTTTTCCTCGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LQVDLPSCSSVHTAALAGANLNY*LFFLAQ Trigger: CTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGC...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGGGTAGATCTTCCAAGTaGTTCCTCGGTCCACACCGC | + |
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Preference number: 3 (lower is better) Translates to: LLFFLAQSTKLYSDTNVVGRSSK*FLGPHR Trigger: GCGGTGTGGACCGAGGAACAACTTGGAAGATCTACC...CACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAATCCTGCCGTAAGAGGTaGCGCCTGAACTTGGCTCGG | + |
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Preference number: 3 (lower is better) Translates to: RSSSQLKLFVVFPRSVHKSCRKR*RLNLAR Trigger: CCGAGCCAAGTTCAGGCGCAACCTCTTACGGCAGGA...TTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| 3UTR TCA 72 bp | GTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTaGCACAAATGTTGTGTTGCAGGTAGATCTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: VVFPRSVHKTVQ*HKCCVAGRSSK Trigger: CTTGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| 3UTR-3UTR CAA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAAGACACAAATGTTGTGTaGCAGGTAGATCTTCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: HPKYGDKTVFLRHVAVFEDTNVV*QVDLPS Trigger: ACTTGGAAGATCTACCTGCAACACAACATTTGTGTC...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| CDS-3UTR CCA 90 bp | TCCGAGGCCGGGCCCGATGGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTGCGAGGCCGGGCCCGATaGCGTCCCTGTCTGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SEAGPDGVPVCSAASVDLRGRAR*RPCLQR Trigger: GCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCG...CAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR GCA 90 bp | GCCGGGCCCGATGGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTGTCCACGCTCGGCCGCCCCTTCTaGACAGTGCCCACGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: AGPDGVPVCSAASVDLSTLGRPF*TVPTPL Trigger: CAATGGCGTGGGCACTGTGCAGAAGGGGCGGCCGAG...CGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR TCA 90 bp | GGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCGCGTGCTGGAGGGGCTaGGCGAGGCGTTGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GVPVCSAASVDLSTPVFSACWRG*ARRWRA Trigger: AGCTCTCCAACGCCTCGCTCAGCCCCTCCAGCACGC...GGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR GCA 90 bp | CGAGGCGTTGGAGAGCTCCGAGGCCGGGCCCGATGGCGTCCCTGTCTGCAGCGCACGCCCGTGTTTTCCTaGCGTAAGAGGTTGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: RGVGELRGRARWRPCLQRTPVFS*RKRLRL Trigger: CAGGCGCAACCTCTTACGGCAGGAAAACACGGGCGT...GCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGAGCTCTCCAACGCCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR GCA 90 bp | CGATGGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTGATGGCGTCCCTGTCTaGAGCGCCGCGTCTGTCGAC | + |
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Preference number: 4 (lower is better) Translates to: RWRPCLQRRVCRLVHARVDGVPV*SAASVD Trigger: GTCGACAGACGCGGCGCTGCAGACAGGGACGCCATC...AACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR GCA 90 bp | CTCCGAGGCCGGGCCCGATGGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTGTCTTTTGCGCGAGCTaGTTCAAGTCCTTGGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: LRGRARWRPCLQRRVCRLVFCAS*FKSLAS Trigger: CGACGCCAAGGACTTGAAGCAGCTCGCGCAAAAGAC...AAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR CCA 90 bp | GCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCTGCCGTAAGAGGTTGCGAAGACCCAGAGGGTTaGCCCCTGCTGCGCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: APRLSTCPRPCFPAVRGCEDPEG*PLLRPA Trigger: GGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTC...GCAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR CCA 90 bp | GGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCACGTGCGCATGCGCTTaGTCTTCTGGCTGCTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: GVPVCSAASVDLSTPVFSTCACA*SSGCSG Trigger: ACCCGAGCAGCCAGAAGACCAAGCGCATGCGCACGT...GGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGAGGCCGGGCCCGATaGCGTCCCTGTCTGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: LQVDLPSCSSVHTAALAGRGRAR*RPCLQR Trigger: GCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCG...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| CDS-3UTR CCA 90 bp | CGATGGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTGACGGACGTCACAGTTaGCAGGGTGGGGCTAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: RWRPCLQRRVCRLVHARVDGRHS*QGGASQ Trigger: TTGACTAGCCCCACCCTGCCAACTGTGACGTCCGTC...AACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR TCA 90 bp | GCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGGGAGGACCCGCTTGGTaGGGCCCGTCTTTTGCGCGA | + |
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Preference number: 4 (lower is better) Translates to: AGRSSKLFLGPHRCISRAGGPAW*GPSFAR Trigger: TCGCGCAAAAGACGGGCCTCACCAAGCGGGTCCTCC...CGCCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
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| CDS-3UTR TCA 90 bp | GGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCGGTAAGAGTCGTTTGTaGGGGGCTGTGAGGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: GVPVCSAASVDLSTPVFSGKSRL*GAVRLM Trigger: CATGAGCCTCACAGCCCCTCACAAACGACTCTTACC...GGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR CCA 90 bp | GCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGCCAAGGCGACCCTCTTaGGCGCTGAGTCGGCGACTG | + |
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Preference number: 4 (lower is better) Translates to: AGRSSKLFLGPHRCISRAPRRPS*ALSRRL Trigger: CAGTCGCCGACTCAGCGCCCAAGAGGGTCGCCTTGG...CGCCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373615.9 |
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| 3UTR CAA 72 bp | GATGGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTaGTCCACGCCCGTGTTTTCCTGCCGTAAGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: DGVPVCSAASVD*STPVFSCRKRL Trigger: CAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS-3UTR GCA 90 bp | GCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGCAGCGCATGTGCCACTaGTTGTCCACCGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGRSSKLFLGPHRCISRAQRMCH*LSTASR Trigger: CCTGCTGGCGGTGGACAAGCAGTGGCACATGCGCTG...CGCCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373615.9 |
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| CDS-3UTR GCA 90 bp | GCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCTGCCGTAAGAGGTTGCGTCCGAAGCTGGTGGTaGTTGAAGGACGTGCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: APRLSTCPRPCFPAVRGCVRSWW*LKDVRM Trigger: CATGCGCACGTCCTTCAAGCACCACCAGCTTCGGAC...GCAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | GCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCTGCCGTAAGAGGTTGCGTGAGGCCCGTCTTTTaGGCGAGCTGCTTCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: APRLSTCPRPCFPAVRGCVRPVF*ASCFKS Trigger: GGACTTGAAGCAGCTCGCGCAAAAGACGGGCCTCAC...GCAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGGACCCTCTTGGGCGCTaGGTCGGCGACTGGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQVDLPSCSSVHTAALAGDPLGR*VGDWSR Trigger: CCTACTCCAGTCGCCGACTCAGCGCCCAAGAGGGTC...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR GCA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCTCGGCCGCCCCTTCTaGACAGTGCCCACGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVDLPSCSSVHTAALAGLGRPF*TVPTPL Trigger: CAATGGCGTGGGCACTGTGCAGAAGGGGCGGCCGAG...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGCTGCTCGGGTATGGCTaGTCACGGTCCAGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGRSSKLFLGPHRCISRALLGYG*SRSRCS Trigger: AGAGCACCTGGACCGTGACCAGCCATACCCGAGCAG...CGCCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCAGGGTTGGCCCCTGCTaGGCCCAGCCCCGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCRVGPC*AQPRAL Trigger: AAGAGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCT...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR GCA 90 bp | GACACAAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCCAGAGGGTTGGCCCCTaGTGCGCCCAGCCCCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DTNVVLQVDLPSCSSVHTQRVGP*CAQPRA Trigger: AGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCTCTG...GGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGGCTTGGTCTTCTGGCTaGTCGGGTATGGCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGRSSKLFLGPHRCISRAAWSSG*SGMAGH Trigger: GTGACCAGCCATACCCGAGCAGCCAGAAGACCAAGC...CGCCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | GACACAAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCCGAGATGCCCAGGTaGCAGCGGGCGCAGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTNVVLQVDLPSCSSVHTAEMPR*QRAQRC Trigger: GCAGCGCTGCGCCCGCTGCCACCTGGGCATCTCGGC...GGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR TCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCGGTCCATCTCGTCGATaGCCCCGTGCACCTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCGPSRR*PRAPRG Trigger: GCCCCGAGGTGCACGGGGTCATCGACGAGATGGACC...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CCA 90 bp | AATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCAGAAGACCCAGAGGGTTaGCCCCTGCTGCGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVVLQVDLPSCSSVHTAAEDPEG*PLLRPA Trigger: GGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTC...TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCGGAGGACCCGCTTGGTaGGGCCCGTCTTTTGCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCGGPAW*GPSFAR Trigger: TCGCGCAAAAGACGGGCCTCACCAAGCGGGTCCTCC...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCTCGTCGATGACCCCGTaGACCTCGGGGCCCGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCSSMTP*TSGPDR Trigger: TCTGTCGGGCCCCGAGGTGCACGGGGTCATCGACGA...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR TCA 90 bp | GGCGTTCTGGAACCAGACCTTGCTTCCAGGAGAGTCTGGGAGGCAGAAGATAAAGTAAGAGGTTGCGCCTaGACTTGGCTCGGGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVLEPDLASRRVWEAEDKVRGCA*TWLGRS Trigger: AGAACGCCCGAGCCAAGTTCAGGCGCAACCTCTTAC...TTTATCTTCTGCCTCCCAGACTCTCCTGGAAGCAAGGTCTGGTTCCAGAACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCAGGTTTCTCCGAAGCCTaGGAGCCGAGTCGAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NVVLQVDLPSCSSVHTAAGFSEA*EPSRAT Trigger: GGTGGCTCGACTCGGCTCGCAGGCTTCGGAGAAACC...TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACAGAGGGTTGGCCCCTaGTGCGCCCAGCCCCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLQRVGP*CAQPRA Trigger: AGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCTCTG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR GCA 90 bp | GACACAAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGATGGCGTCCCTGTCTaGAGCGCCGCGTCTGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: DTNVVLQVDLPSCSSVHTDGVPV*SAASVD Trigger: GTCGACAGACGCGGCGCTGCAGACAGGGACGCCATC...GGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCCGAGATGCCCAGGTaGCAGCGGGCGCAGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLAEMPR*QRAQRC Trigger: GCAGCGCTGCGCCCGCTGCCACCTGGGCATCTCGGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACGAGGCCGGGCCCGATaGCGTCCCTGTCTGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLRGRAR*RPCLQR Trigger: GCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAAGGGTTGGCCCCTGCTaGGCCCAGCCCCGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLRVGPC*AQPRAL Trigger: AAGAGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR GCA 90 bp | GGCGTTCTGGAACCAGACCTTGCTTCCAGGAGAGTCTGGGAGGCAGAAGATAAATGGTCACGGTCCAGGTaGTCTGCGTCGTTTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVLEPDLASRRVWEAEDKWSRSR*SASFSL Trigger: CAACGAAAACGACGCAGAGCACCTGGACCGTGACCA...TTTATCTTCTGCCTCCCAGACTCTCCTGGAAGCAAGGTCTGGTTCCAGAACGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGTCTGGAACCAGACCTTaGTTCCAGGAGAGTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQVDLPSCSSVHTAALAGSGTRP*FQESLG Trigger: TCCCAGACTCTCCTGGAAGCAAGGTCTGGTTCCAGA...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | GACACAAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCTCAAGTCTGTCAGGGTaGTGGGCGTGCTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DTNVVLQVDLPSCSSVHTSSLSG*WACWRG Trigger: GCCCCTCCAGCACGCCCACCACCCTGACAGACTTGA...GGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | GCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCTGCCGTAAGAGGTTGCTTTTTAAAGAAATTGTaGGGTGAGGGGTTGCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: APRLSTCPRPCFPAVRGCFLKKL*GEGLRV Trigger: GACTCGCAACCCCTCACCCCACAATTTCTTTAAAAA...GCAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGGTCCATCTCGTCGATaGCCCCGTGCACCTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLGPSRR*PRAPRG Trigger: GCCCCGAGGTGCACGGGGTCATCGACGAGATGGACC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGGTCGATGGCGGAGCTaGTGGCGGGAGCCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLGRWRS*WREPRS Trigger: AGAGCGAGGCTCCCGCCATCAGCTCCGCCATCGACC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR TCA 90 bp | GACACAAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCTGCACTCGCAGCACTTaGGGCAGCGCATGTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DTNVVLQVDLPSCSSVHTCTRST*GSACAT Trigger: AGTGGCACATGCGCTGCCTCAAGTGCTGCGAGTGCA...GGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCGTGCTGGAGGGGCTaGGCGAGGCGTTGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLACWRG*ARRWRA Trigger: AGCTCTCCAACGCCTCGCTCAGCCCCTCCAGCACGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCCAAGGGCGCAAACTCTaGCCGAGGCGGCGACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCQGRKL*PRRRRL Trigger: CAGCCGTCGCCGCCTCGGGCAGAGTTTGCGCCCTTG...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCGGGGTACTCGCCCTaGAGCAGCGCCTCGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLAGYSP*SSASKC Trigger: GCACTTCGAGGCGCTGCTGCAGGGCGAGTACCCCGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCGCCCCTTCTGCACAGTaGCCACGCCATTGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCAPSAQ*PRHCSR Trigger: CCTACTACAATGGCGTGGGCACTGTGCAGAAGGGGC...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCAACGCCCGTGTTTTCCTaGCGTAAGAGGTTGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVVLQVDLPSCSSVHTAATPVFS*RKRLRL Trigger: CAGGCGCAACCTCTTACGGCAGGAAAACACGGGCGT...TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAACATTGCGGGGCGCCTaGGCGACGGCGCCAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLTLRGA*ATAPKP Trigger: TGGCTTTGGCGCCGTCGCCCAGGCGCCCCGCAATGT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGAAGACCCAGAGGGTTaGCCCCTGCTGCGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLEDPEG*PLLRPA Trigger: GGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | AATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCAATGGTCCGAAGCTGGTaGTGCTTGAAGGACGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NVVLQVDLPSCSSVHTAAMVRSW*CLKDVR Trigger: GCGCACGTCCTTCAAGCACCACCAGCTTCGGACCAT...TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | AATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTCTGGAACCAGACCTaGAGGACCCGCTTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVVLQVDLPSCSSVHTAAFWNQT*RTRLVR Trigger: CCTCACCAAGCGGGTCCTCCAGGTCTGGTTCCAGAA...TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACGGCGCGGTCACTGCTaGTGGACGGCATGGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLRRGHC*WTAWSS Trigger: AGACGACCATGCCGTCCATCAGCAGTGACCGCGCCG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGGAGGACCCGCTTGGTaGGGCCCGTCTTTTGCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLGGPAW*GPSFAR Trigger: TCGCGCAAAAGACGGGCCTCACCAAGCGGGTCCTCC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATCGTCGATGACCCCGTaGACCTCGGGGCCCGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLSSMTP*TSGPDR Trigger: TCTGTCGGGCCCCGAGGTGCACGGGGTCATCGACGA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR GCA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAAGCGGGGTACTCGCCCTaGAGCAGCGCCTCGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPKYGDKTVFLRHVAVFEAGYSP*SSASKC Trigger: GCACTTCGAGGCGCTGCTGCAGGGCGAGTACCCCGC...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACTCGGCCGCCCCTTCTaGACAGTGCCCACGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLLGRPF*TVPTPL Trigger: CAATGGCGTGGGCACTGTGCAGAAGGGGCGGCCGAG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCACGGTCCAGGTGCTCTaGGTCGTTTTCGTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCTVQVL*VVFVAA Trigger: AGCTGCAACGAAAACGACGCAGAGCACCTGGACCGT...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCTGGTCACGGTCCAGGTaGTCTGCGTCGTTTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCWSRSR*SASFSL Trigger: CAACGAAAACGACGCAGAGCACCTGGACCGTGACCA...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCGTCTTTTGCGCGAGCTaGTTCAAGTCCTTGGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCVFCAS*FKSLAS Trigger: CGACGCCAAGGACTTGAAGCAGCTCGCGCAAAAGAC...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACGGGAGCCTCGCTCTTaGCCCTGCGGTCCATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLREPRS*PCGPSR Trigger: ACGAGATGGACCGCAGGGCCAAGAGCGAGGCTCCCG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCAACAAAGCGACCGTTaGAGGGGGTTTGATTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVDLPSCSSVHTAALAGQQSDR*RGFDFS Trigger: GGAAAAATCAAACCCCCTCCAACGGTCGCTTTGTTG...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACCACGTCGGCATGGTTaGAGTGTGCGGGGTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLPRRHG*SVRGTR Trigger: GCGAGTACCCCGCACACTTCAACCATGCCGACGTGG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACAGCGCATGTGCCACTaGTTGTCCACCGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLQRMCH*LSTASR Trigger: CCTGCTGGCGGTGGACAAGCAGTGGCACATGCGCTG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCCATGGCCCTCCAGGTTaGCAGGCACAGAAGTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCHGPPG*QAQKLR Trigger: TCTTAACTTCTGTGCCTGGCAACCTGGAGGGCCATG...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGCGGGAGCCTCGCTCTTaGCCCTGCGGTCCATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFFLAQSTKLYSDTNVVREPRS*PCGPSR Trigger: ACGAGATGGACCGCAGGGCCAAGAGCGAGGCTCCCG...CACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCCTGGCTGCTCGGGTATaGCTGGTCACGGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCLAARV*LVTVQV Trigger: CACCTGGACCGTGACCAGCCATACCCGAGCAGCCAG...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACTGGCTGCTCGGGTATaGCTGGTCACGGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLLAARV*LVTVQV Trigger: CACCTGGACCGTGACCAGCCATACCCGAGCAGCCAG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCAGGTAGATCTTCCACTGGCTGCTCGGGTATaGCTGGTCACGGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSTKLYSDTNVVLQVDLPLAARV*LVTVQV Trigger: CACCTGGACCGTGACCAGCCATACCCGAGCAGCCAG...TGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCAGGTAGATCTTCCATCAAGTCTGTCAGGGTaGTGGGCGTGCTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSTKLYSDTNVVLQVDLPSSLSG*WACWRG Trigger: GCCCCTCCAGCACGCCCACCACCCTGACAGACTTGA...TGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATCAAGTCTGTCAGGGTaGTGGGCGTGCTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLSSLSG*WACWRG Trigger: GCCCCTCCAGCACGCCCACCACCCTGACAGACTTGA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAAGGTCGATGGCGGAGCTaGTGGCGGGAGCCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSSSQLKLFVVFPRSVHKGRWRS*WREPRS Trigger: AGAGCGAGGCTCCCGCCATCAGCTCCGCCATCGACC...TTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATGCACTCGCAGCACTTaGGGCAGCGCATGTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLCTRST*GSACAT Trigger: AGTGGCACATGCGCTGCCTCAAGTGCTGCGAGTGCA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCTCCGACTCCAGGTTaGGCTTGCACTCGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLAPTPG*ACTRST Trigger: AGTGCTGCGAGTGCAAGCTCAACCTGGAGTCGGAGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR TCA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAACCACGTCGGCATGGTTaGAGTGTGCGGGGTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HPKYGDKTVFLRHVAVFEPRRHG*SVRGTR Trigger: GCGAGTACCCCGCACACTTCAACCATGCCGACGTGG...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGAAGCTGGTGGTGCTTaGAGGACGTGCGCATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLEAGGA*RTCACA Trigger: AGCGCATGCGCACGTCCTTCAAGCACCACCAGCTTC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AAATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCTCCGAGGGAGGGCTTaGCCCCCGCCTCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KYRSSSQLKLFVVFPRSVLRGRA*PPPQLP Trigger: AGGCAGCTGAGGCGGGGGGCAAGCCCTCCCTCGGAG...GACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATTGAGGCAGCGCATGTaGCACTGCTTGTCCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLLRQRM*HCLSTA Trigger: GGCGGTGGACAAGCAGTGGCACATGCGCTGCCTCAA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR GCA 90 bp | GACACAAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCCTGCGTCGTTTTCGTTaGAGCTTAGCGCAGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTNVVLQVDLPSCSSVHTLRRFR*SLAQRC Trigger: ACAACGCTGCGCTAAGCTGCAACGAAAACGACGCAG...GGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCTGCCACGTCGGCATaGTTGAAGTGTGCGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLAATSA*LKCAGY Trigger: GTACCCCGCACACTTCAACCATGCCGACGTGGCAGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCCTGCTCGGGTATGGCTaGTCACGGTCCAGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCLLGYG*SRSRCS Trigger: AGAGCACCTGGACCGTGACCAGCCATACCCGAGCAG...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACTGCTCGGGTATGGCTaGTCACGGTCCAGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLLLGYG*SRSRCS Trigger: AGAGCACCTGGACCGTGACCAGCCATACCCGAGCAG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAACGTGCGCATGCGCTTaGTCTTCTGGCTGCTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLTCACA*SSGCSG Trigger: ACCCGAGCAGCCAGAAGACCAAGCGCATGCGCACGT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCCGGCGCGGTCACTGCTaGTGGACGGCATGGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTEALANLNYLLFFLAQSRRGHC*WTAWSS Trigger: AGACGACCATGCCGTCCATCAGCAGTGACCGCGCCG...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCGTAAGAGGTTGCGCCTaGACTTGGCTCGGGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCVRGCA*TWLGRS Trigger: AGAACGCCCGAGCCAAGTTCAGGCGCAACCTCTTAC...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGTAAGAGGTTGCGCCTaGACTTGGCTCGGGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLVRGCA*TWLGRS Trigger: AGAACGCCCGAGCCAAGTTCAGGCGCAACCTCTTAC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCAGGTAGATCTTCCAGCCCCTTCTGCACAGTaGCCACGCCATTGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTKLYSDTNVVLQVDLPAPSAQ*PRHCSR Trigger: CCTACTACAATGGCGTGGGCACTGTGCAGAAGGGGC...TGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCCCCTTCTGCACAGTaGCCACGCCATTGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLAPSAQ*PRHCSR Trigger: CCTACTACAATGGCGTGGGCACTGTGCAGAAGGGGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCTTGGTCTTCTGGCTaGTCGGGTATGGCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLAWSSG*SGMAGH Trigger: GTGACCAGCCATACCCGAGCAGCCAGAAGACCAAGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGTCCGAAGCTGGTGGTaGTTGAAGGACGTGCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLVRSWW*LKDVRM Trigger: CATGCGCACGTCCTTCAAGCACCACCAGCTTCGGAC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGTGAGGCCCGTCTTTTaGGCGAGCTGCTTCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLVRPVF*ASCFKS Trigger: GGACTTGAAGCAGCTCGCGCAAAAGACGGGCCTCAC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAACGCCCGTGTTTTCCTaGCGTAAGAGGTTGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLTPVFS*RKRLRL Trigger: CAGGCGCAACCTCTTACGGCAGGAAAACACGGGCGT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCGGGCCCGACAGACTGTaGAACAGCATCGCGGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTEALANLNYLLFFLAQSGPDRL*NSIAAG Trigger: TCCCGCCGCGATGCTGTTCCACAGTCTGTCGGGCCC...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCATGCGCTTGGTCTTCTaGCTGCTCGGGTATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCMRLVF*LLGYGW Trigger: CCAGCCATACCCGAGCAGCCAGAAGACCAAGCGCAT...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAATGCGCTTGGTCTTCTaGCTGCTCGGGTATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLMRLVF*LLGYGW Trigger: CCAGCCATACCCGAGCAGCCAGAAGACCAAGCGCAT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAATGGTCCGAAGCTGGTaGTGCTTGAAGGACGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLMVRSW*CLKDVR Trigger: GCGCACGTCCTTCAAGCACCACCAGCTTCGGACCAT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | AATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCACAAAGTAAGACTTCATaGTCCGAAGCTGGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVVLQVDLPSCSSVHTAAQSKTS*SEAGGA Trigger: AGCACCACCAGCTTCGGACCATGAAGTCTTACTTTG...TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATTCTGGAACCAGACCTaGAGGACCCGCTTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLFWNQT*RTRLVR Trigger: CCTCACCAAGCGGGTCCTCCAGGTCTGGTTCCAGAA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGACGGACGTCACAGTTaGCAGGGTGGGGCTAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLDGRHS*QGGASQ Trigger: TTGACTAGCCCCACCCTGCCAACTGTGACGTCCGTC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGGTAAGAGTCGTTTGTaGGGGGCTGTGAGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLGKSRL*GAVRLM Trigger: CATGAGCCTCACAGCCCCTCACAAACGACTCTTACC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAACGGTCCAGGTGCTCTaGGTCGTTTTCGTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLTVQVL*VVFVAA Trigger: AGCTGCAACGAAAACGACGCAGAGCACCTGGACCGT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATGGTCACGGTCCAGGTaGTCTGCGTCGTTTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLWSRSR*SASFSL Trigger: CAACGAAAACGACGCAGAGCACCTGGACCGTGACCA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGGCTTGGTCTTCTGGCTaGTCGGGTATGGCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFFLAQSTKLYSDTNVVAWSSG*SGMAGH Trigger: GTGACCAGCCATACCCGAGCAGCCAGAAGACCAAGC...CACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGTCTTTTGCGCGAGCTaGTTCAAGTCCTTGGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLVFCAS*FKSLAS Trigger: CGACGCCAAGGACTTGAAGCAGCTCGCGCAAAAGAC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCCTCGGTCCACACCGCTaGATTAGCCGGGCGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: NTEALANLNYLLFFLAQSLGPHR*ISRAHT Trigger: AGTGTGCGCCCGGCTAATGCAGCGGTGTGGACCGAG...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAAATGCGCTTGGTCTTCTaGCTGCTCGGGTATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPKYGDKTVFLRHVAVFEMRLVF*LLGYGW Trigger: CCAGCCATACCCGAGCAGCCAGAAGACCAAGCGCAT...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAAATGGTCCGAAGCTGGTaGTGCTTGAAGGACGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HPKYGDKTVFLRHVAVFEMVRSW*CLKDVR Trigger: GCGCACGTCCTTCAAGCACCACCAGCTTCGGACCAT...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATTGGCTCGGGCGTTCTaGAACCAGACCTTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLLARAF*NQTLLP Trigger: TGGAAGCAAGGTCTGGTTCCAGAACGCCCGAGCCAA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAAGAAGCTGGTGGTGCTTaGAGGACGTGCGCATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSSSQLKLFVVFPRSVHKEAGGA*RTCACA Trigger: AGCGCATGCGCACGTCCTTCAAGCACCACCAGCTTC...TTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAAGGTAAGAGTCGTTTGTaGGGGGCTGTGAGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: HPKYGDKTVFLRHVAVFEGKSRL*GAVRLM Trigger: CATGAGCCTCACAGCCCCTCACAAACGACTCTTACC...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCTTGAGGCAGCGCATGTaGCACTGCTTGTCCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTEALANLNYLLFFLAQSLRQRM*HCLSTA Trigger: GGCGGTGGACAAGCAGTGGCACATGCGCTGCCTCAA...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACTGCGTCGTTTTCGTTaGAGCTTAGCGCAGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLLRRFR*SLAQRC Trigger: ACAACGCTGCGCTAAGCTGCAACGAAAACGACGCAG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGACGGTCCAGGTGCTCTaGGTCGTTTTCGTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFFLAQSTKLYSDTNVVTVQVL*VVFVAA Trigger: AGCTGCAACGAAAACGACGCAGAGCACCTGGACCGT...CACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCCATGGCCCTCCAGGTTaGCAGGCACAGAAGTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCHGPPG*QAQKLR Trigger: TCTTAACTTCTGTGCCTGGCAACCTGGAGGGCCATG...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACATGGCCCTCCAGGTTaGCAGGCACAGAAGTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLHGPPG*QAQKLR Trigger: TCTTAACTTCTGTGCCTGGCAACCTGGAGGGCCATG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AAATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCTCGGTCCACACCGCTaGATTAGCCGGGCGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: KYRSSSQLKLFVVFPRSVLGPHR*ISRAHT Trigger: AGTGTGCGCCCGGCTAATGCAGCGGTGTGGACCGAG...GACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACGTGCGCATGCGCTTaGTCTTCTGGCTGCTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTEALANLNYLLFFLAQSTCACA*SSGCSG Trigger: ACCCGAGCAGCCAGAAGACCAAGCGCATGCGCACGT...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | AAATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCGCTCCGACTCCAGGTTaGGCTTGCACTCGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KYRSSSQLKLFVVFPRSVAPTPG*ACTRST Trigger: AGTGCTGCGAGTGCAAGCTCAACCTGGAGTCGGAGC...GACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR TCA 90 bp | AAATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCGAAGCTGGTGGTGCTTaGAGGACGTGCGCATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KYRSSSQLKLFVVFPRSVEAGGA*RTCACA Trigger: AGCGCATGCGCACGTCCTTCAAGCACCACCAGCTTC...GACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGCTGCGTCGTTTTCGTTaGAGCTTAGCGCAGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFFLAQSTKLYSDTNVVLRRFR*SLAQRC Trigger: ACAACGCTGCGCTAAGCTGCAACGAAAACGACGCAG...CACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAGCTGCCACGTCGGCATaGTTGAAGTGTGCGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LNYLLFFLAQSTKLYSDTAATSA*LKCAGY Trigger: GTACCCCGCACACTTCAACCATGCCGACGTGGCAGC...TGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| 3UTR CAA 72 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTaGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QSTKLYSDTNVV*QVDLPSCSSVH Trigger: GTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCAGGTAGATCTTCCAGCACGTGGCAGTCTTTaGAAATACAGAAGCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSTKLYSDTNVVLQVDLPARGSL*KYRSSS Trigger: GCTAGAGCTTCTGTATTTTCAAAGACTGCCACGTGC...TGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR GCA 90 bp | AAATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCGTCCGAAGCTGGTGGTaGTTGAAGGACGTGCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KYRSSSQLKLFVVFPRSVVRSWW*LKDVRM Trigger: CATGCGCACGTCCTTCAAGCACCACCAGCTTCGGAC...GACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACAAAGTAAGACTTCATaGTCCGAAGCTGGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLQSKTS*SEAGGA Trigger: AGCACCACCAGCTTCGGACCATGAAGTCTTACTTTG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCCAACAAAGCGACCGTTaGAGGGGGTTTGATTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCQQSDR*RGFDFS Trigger: GGAAAAATCAAACCCCCTCCAACGGTCGCTTTGTTG...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAAGCACGTGGCAGTCTTTaGAAATACAGAAGCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPKYGDKTVFLRHVAVFEARGSL*KYRSSS Trigger: GCTAGAGCTTCTGTATTTTCAAAGACTGCCACGTGC...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCCAAAGTAAGACTTCATaGTCCGAAGCTGGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTEALANLNYLLFFLAQSQSKTS*SEAGGA Trigger: AGCACCACCAGCTTCGGACCATGAAGTCTTACTTTG...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCGCTTCCAGGAGAGTCTaGGAGGCAGAAGATAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: NTEALANLNYLLFFLAQSASRRV*EAEDKS Trigger: AGATTTATCTTCTGCCTCCCAGACTCTCCTGGAAGC...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCAGGTAGATCTTCCAAGAGGGAGAGAAAAATaGACAAGTCATCCAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QSTKLYSDTNVVLQVDLPRGREK*TSHPKY Trigger: ATACTTTGGATGACTTGTTCATTTTTCTCTCCCTCT...TGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CCA 90 bp | TTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACATTTTTAAAGAAATTGTaGGGTGAGGGGTTGCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNYLLFFLAQSTKLYSDTFLKKL*GEGLRV Trigger: GACTCGCAACCCCTCACCCCACAATTTCTTTAAAAA...TGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAAAGAGGGAGAGAAAAATaGACAAGTCATCCAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSSSQLKLFVVFPRSVHKRGREK*TSHPKY Trigger: ATACTTTGGATGACTTGTTCATTTTTCTCTCCCTCT...TTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS GCA 90 bp | CCGCCCGGCTTCAGCGCCCGGGGCGCAAAGCAAGGGCGCAAACTCTaGCCGAGGCGGCGACGGCTGCGGTCGGGGTTCACCCTGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPGFSARGAKQGRKL*PRRRRLRSGFTLKP Trigger: CGGCTTCAGGGTGAACCCCGACCGCAGCCGTCGCCGCCTCGGGCAGAGTTTGCGCCCTTGCTTTGCGCCCCGGGCGCTGAAGCCGGGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS GCA 90 bp | GCCCACGCCATTGTAGTAGGGAAGACCCAGAGGGTTGGCCCCTGCTaGGCCCAGCCCCGCGCTCTTGGCCGCCGCGGCTGCAGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AHAIVVGKTQRVGPC*AQPRALGRRGCSGR Trigger: GCGGCCGCTGCAGCCGCGGCGGCCAAGAGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCCCTACTACAATGGCGTGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS CCA 90 bp | GACGCCTCCCGCCGAGGCGCAGGGGCAGCTACATTGCGGGGCGCCTaGGCGACGGCGCCAAAGCCAGGGTCACAAGGGCACGGGACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DASRRGAGAATLRGA*ATAPKPGSQGHGTS Trigger: GCTTGTCCCGTGCCCTTGTGACCCTGGCTTTGGCGCCGTCGCCCAGGCGCCCCGCAATGTAGCTGCCCCTGCGCCTCGGCGGGAGGCGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS GCA 90 bp | AGTGCCCACGCCATTGTAGTAGGGAAGACCCAGAGGGTTGGCCCCTaGTGCGCCCAGCCCCGCGCTCTTGGCCGCCGCGGCTGCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAHAIVVGKTQRVGP*CAQPRALGRRGCSG Trigger: GCCGCTGCAGCCGCGGCGGCCAAGAGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCCCTACTACAATGGCGTGGGCACT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS CCA 90 bp | TCTGCACAGTGCCCACGCCATTGTAGTAGGGAAGACCCAGAGGGTTaGCCCCTGCTGCGCCCAGCCCCGCGCTCTTGGCCGCCGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAQCPRHCSREDPEG*PLLRPAPRSWPPRL Trigger: CAGCCGCGGCGGCCAAGAGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCCCTACTACAATGGCGTGGGCACTGTGCAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS TCA 90 bp | TGGACGGCATGGTCGTCTCGGTGTCGCCGCGGTCGATGGCGGAGCTaGTGGCGGGAGCCTCGCTCTTGGCCCTGCGGTCCATCTCGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: WTAWSSRCRRGRWRS*WREPRSWPCGPSRR Trigger: TCGACGAGATGGACCGCAGGGCCAAGAGCGAGGCTCCCGCCATCAGCTCCGCCATCGACCGCGGCGACACCGAGACGACCATGCCGTCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS GCA 90 bp | GGAGCCTCGCTCTTGGCCCTGCGGTCCATCTCGTCGATGACCCCGTaGACCTCGGGGCCCGACAGACTGTGGAACAGCATCGCGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GASLLALRSISSMTP*TSGPDRLWNSIAAG Trigger: TCCCGCCGCGATGCTGTTCCACAGTCTGTCGGGCCCCGAGGTGCACGGGGTCATCGACGAGATGGACCGCAGGGCCAAGAGCGAGGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CAA 90 bp | CTCCGAGGCCGGGCCCGATGGCGTCCCTGTCTGCAGCGCCGCGTCTGTCGACTTAGGTTGCGCCTGAACTaGGCTCGGGCGTTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRGRARWRPCLQRRVCRLRLRLN*ARAFWN Trigger: GTTCCAGAACGCCCGAGCCAAGTTCAGGCGCAACCT...AAGTCGACAGACGCGGCGCTGCAGACAGGGACGCCATCGGGCCCGGCCTCGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGGGGCTGAGCGAGGCGTaGGAGAGCTCCGAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGRSSKLFLGPHRCISRAGLSEA*ESSEAG Trigger: CCCGGCCTCGGAGCTCTCCAACGCCTCGCTCAGCCC...CGCCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGCAGCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCTGCCGTAGCCTGGAGGACCCGCTaGGTGAGGCCCGTCTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSAAPRLSTCPRPCFPAVAWRTR*VRPVFC Trigger: GCAAAAGACGGGCCTCACCAAGCGGGTCCTCCAGGC...TACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGCTGCAGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGGCCGCGTCTGTCGACTaGTCCACGCCCGTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGRSSKLFLGPHRCISRAAASVD*STPVFS Trigger: GGAAAACACGGGCGTGGACAAGTCGACAGACGCGGC...CGCCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGGACGTGCGCATGCGCTaGGTCTTCTGGCTGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LQVDLPSCSSVHTAALAGDVRMR*VFWLLG Trigger: CCCGAGCAGCCAGAAGACCAAGCGCATGCGCACGTC...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGTCCTGCCGTAAGAGGTaGCGCCTGAACTTGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGRSSKLFLGPHRCISRASCRKR*RLNLAR Trigger: CCGAGCCAAGTTCAGGCGCAACCTCTTACGGCAGGA...CGCCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | GCGCCGCGTCTGTCGACTTGTCCACGCCCGTGTTTTCCTGCCGTAAGAGGTTGCGGTAGATCTTCCAAGTaGTTCCTCGGTCCACACCGC | + |
|
Preference number: 5 (lower is better) Translates to: APRLSTCPRPCFPAVRGCGRSSK*FLGPHR Trigger: GCGGTGTGGACCGAGGAACAACTTGGAAGATCTACC...GCAACCTCTTACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGCGTCTGCGTCGTTTTCGTaGCAGCTTAGCGCAGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGRSSKLFLGPHRCISRASASFS*QLSAAL Trigger: CAACGCTGCGCTAAGCTGCAACGAAAACGACGCAGA...CGCCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | AAATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCACCTGGAGGACCCGCTaGGTGAGGCCCGTCTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KCCVAGRSSKLFLGPHRCTWRTR*VRPVFC Trigger: GCAAAAGACGGGCCTCACCAAGCGGGTCCTCCAGGT...GCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCAGCCGCGTCTGTCGACTaGTCCACGCCCGTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NVVLQVDLPSCSSVHTAAAASVD*STPVFS Trigger: GGAAAACACGGGCGTGGACAAGTCGACAGACGCGGC...TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGGGCTGAGCGAGGCGTaGGAGAGCTCCGAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLGLSEA*ESSEAG Trigger: CCCGGCCTCGGAGCTCTCCAACGCCTCGCTCAGCCC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCGGGCTGAGCGAGGCGTaGGAGAGCTCCGAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCGLSEA*ESSEAG Trigger: CCCGGCCTCGGAGCTCTCCAACGCCTCGCTCAGCCC...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCGGGAGCCTCGCTCTaGGCCCTGCGGTCCATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLAGASL*ALRSIS Trigger: CGAGATGGACCGCAGGGCCAAGAGCGAGGCTCCCGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCGGAAGACCCAGAGGGTaGGCCCCTGCTGCGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCGRPRG*APAAPS Trigger: GCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCC...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGGAAGACCCAGAGGGTaGGCCCCTGCTGCGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLGRPRG*APAAPS Trigger: GCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | AATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCAAGGTTGCGCCTGAACTaGGCTCGGGCGTTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NVVLQVDLPSCSSVHTAARLRLN*ARAFWN Trigger: GTTCCAGAACGCCCGAGCCAAGTTCAGGCGCAACCT...TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCAGGTAGATCTTCCACCCAAGGCGACCCTCTaGGGCGCTGAGTCGGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: QSTKLYSDTNVVLQVDLPPKATL*GAESAT Trigger: AGTCGCCGACTCAGCGCCCAAGAGGGTCGCCTTGGG...TGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CAA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCGCAGGGGCAGCTACATaGCGGGGCGCCTGGGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: NTEALANLNYLLFFLAQSAGAAT*RGAWAT Trigger: CGTCGCCCAGGCGCCCCGCAATGTAGCTGCCCCTGC...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGACGTGCGCATGCGCTaGGTCTTCTGGCTGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLDVRMR*VFWLLG Trigger: CCCGAGCAGCCAGAAGACCAAGCGCATGCGCACGTC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | AATGTTGTGTTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATCATGGCCCTCCAGGTaGCCAGGCACAGAAGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: NVVLQVDLPSCSSVHTAASWPSR*PGTEVK Trigger: CTTAACTTCTGTGCCTGGCAACCTGGAGGGCCATGA...TGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAACACAACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCGCGGGAGCCTCGCTCTaGGCCCTGCGGTCCATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NTEALANLNYLLFFLAQSAGASL*ALRSIS Trigger: CGAGATGGACCGCAGGGCCAAGAGCGAGGCTCCCGC...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CAA 90 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCAGGTAGATCTTCCAGCCACGTCGGCATGGTaGAAGTGTGCGGGGTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: QSTKLYSDTNVVLQVDLPATSAW*KCAGYS Trigger: CGAGTACCCCGCACACTTCAACCATGCCGACGTGGC...TGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCCACGTCGGCATGGTaGAAGTGTGCGGGGTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLATSAW*KCAGYS Trigger: CGAGTACCCCGCACACTTCAACCATGCCGACGTGGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAACCTGGAGGACCCGCTaGGTGAGGCCCGTCTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLTWRTR*VRPVFC Trigger: GCAAAAGACGGGCCTCACCAAGCGGGTCCTCCAGGT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGCCGCGTCTGTCGACTaGTCCACGCCCGTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLAASVD*STPVFS Trigger: GGAAAACACGGGCGTGGACAAGTCGACAGACGCGGC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAAGCTCCGACTCCAGGTaGAGCTTGCACTCGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLSSDSR*SLHSQH Trigger: GTGCTGCGAGTGCAAGCTCAACCTGGAGTCGGAGCT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR CAA 90 bp | AAATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCGGAAGACCCAGAGGGTaGGCCCCTGCTGCGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KYRSSSQLKLFVVFPRSVGRPRG*APAAPS Trigger: GCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCC...GACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCAGGTAGATCTTCCAGGTGAGGCCCGTCTTTaGCGCGAGCTGCTTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QSTKLYSDTNVVLQVDLPGEARL*RELLQV Trigger: GACTTGAAGCAGCTCGCGCAAAAGACGGGCCTCACC...TGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAGGTGAGGCCCGTCTTTaGCGCGAGCTGCTTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLGEARL*RELLQV Trigger: GACTTGAAGCAGCTCGCGCAAAAGACGGGCCTCACC...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTAAGGTTGCGCCTGAACTaGGCTCGGGCGTTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLRLRLN*ARAFWN Trigger: GTTCCAGAACGCCCGAGCCAAGTTCAGGCGCAACCT...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATCCTGCCGTAAGAGGTaGCGCCTGAACTTGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLSCRKR*RLNLAR Trigger: CCGAGCCAAGTTCAGGCGCAACCTCTTACGGCAGGA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGTAGATCTTCCAAGTTGTTCCTCGGTCCACACCGCTGCATTAGCCGGGGACACAAATGTTGTGTaGCAGGTAGATCTTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LQVDLPSCSSVHTAALAGDTNVV*QVDLPS Trigger: ACTTGGAAGATCTACCTGCAACACAACATTTGTGTC...CCCGGCTAATGCAGCGGTGTGGACCGAGGAACAACTTGGAAGATCTACCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTACCCGTGGTCAGCATCTaGTTACACGTGGTGCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLPVVSI*LHVVHV Trigger: CACGTGCACCACGTGTAACAAGATGCTGACCACGGG...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS-3UTR CAA 90 bp | CATCCAAAGTATGGAGATAAAACAGTATTCCTAAGGCACGTGGCAGTCTTTGAAGGTGAGGCCCGTCTTTaGCGCGAGCTGCTTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HPKYGDKTVFLRHVAVFEGEARL*RELLQV Trigger: GACTTGAAGCAGCTCGCGCAAAAGACGGGCCTCACC...TTCAAAGACTGCCACGTGCCTTAGGAATACTGTTTTATCTCCATACTTTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATCTGCGTCGTTTTCGTaGCAGCTTAGCGCAGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLSASFS*QLSAAL Trigger: CAACGCTGCGCTAAGCTGCAACGAAAACGACGCAGA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCAGGTAGATCTTCCATCATGGCCCTCCAGGTaGCCAGGCACAGAAGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSTKLYSDTNVVLQVDLPSWPSR*PGTEVK Trigger: CTTAACTTCTGTGCCTGGCAACCTGGAGGGCCATGA...TGGAAGATCTACCTGCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCCAGGCGAGATCCTAAAATGTGGTTAGTTAGTTGCTCAAAGCCTCTATCATGGCCCTCCAGGTaGCCAGGCACAGAAGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDPKMWLVSCSKPLSWPSR*PGTEVK Trigger: CTTAACTTCTGTGCCTGGCAACCTGGAGGGCCATGA...TAGAGGCTTTGAGCAACTAACTAACCACATTTTAGGATCTCGCCTGGAAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCTCCTGCCGTAAGAGGTaGCGCCTGAACTTGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NTEALANLNYLLFFLAQSSCRKR*RLNLAR Trigger: CCGAGCCAAGTTCAGGCGCAACCTCTTACGGCAGGA...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCGACTCCAGGTTGAGCTaGCACTCGCAGCACTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NTEALANLNYLLFFLAQSDSRLS*HSQHLR Trigger: CCTCAAGTGCTGCGAGTGCAAGCTCAACCTGGAGTC...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CAA 90 bp | AATACAGAAGCTCTAGCCAACTTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCCCCGTGGTCAGCATCTaGTTACACGTGGTGCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTEALANLNYLLFFLAQSPVVSI*LHVVHV Trigger: CACGTGCACCACGTGTAACAAGATGCTGACCACGGG...GGACTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGCTAGAGCTTCTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS-3UTR CAA 90 bp | TTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACATCTGCGTCGTTTTCGTaGCAGCTTAGCGCAGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNYLLFFLAQSTKLYSDTSASFS*QLSAAL Trigger: CAACGCTGCGCTAAGCTGCAACGAAAACGACGCAGA...TGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TTAAATTATTTGTTGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAGGTAGATCTTCCAAGTaGTTCCTCGGTCCACACCGC | + |
|
Preference number: 5 (lower is better) Translates to: LNYLLFFLAQSTKLYSDTGRSSK*FLGPHR Trigger: GCGGTGTGGACCGAGGAACAACTTGGAAGATCTACC...TGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACAACAAATAATTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTCCTCGCTCAGTCCACAAAACTGTACAGTGACACAAATGTTGTGTTGCGCCAACTTAAATTATTaGTTGTTTTTCCTCGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CFSSLSPQNCTVTQMLCCANLNY*LFFLAQ Trigger: CTGAGCGAGGAAAAACAACAAATAATTTAAGTTGGC...GCAACACAACATTTGTGTCACTGTACAGTTTTGTGGACTGAGCGAGGAAAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000488674.2 |
||
| CDS CAA 72 bp | CAGGACGCCTCCCGCCGAGGCGCAGGGGCAGCTACATaGCGGGGCGCCTGGGCGACGGCGCCAAAGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QDASRRGAGAAT*RGAWATAPKPG Trigger: CCCTGGCTTTGGCGCCGTCGCCCAGGCGCCCCGCAATGTAGCTGCCCCTGCGCCTCGGCGGGAGGCGTCCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS TCA 72 bp | CCCCGCAGCCGGCGCACAGCGCGGCGCGGTCACTGCTaGTGGACGGCATGGTCGTCTCGGTGTCGCCGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRSRRTARRGHC*WTAWSSRCRRG Trigger: ACCGCGGCGACACCGAGACGACCATGCCGTCCATCAGCAGTGACCGCGCCGCGCTGTGCGCCGGCTGCGGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS CCA 72 bp | CGCCGAGGCGCAGGGGCAGCTACATTGCGGGGCGCCTaGGCGACGGCGCCAAAGCCAGGGTCACAAGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRGAGAATLRGA*ATAPKPGSQGH Trigger: GTGCCCTTGTGACCCTGGCTTTGGCGCCGTCGCCCAGGCGCCCCGCAATGTAGCTGCCCCTGCGCCTCGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS GCA 72 bp | TTCAGCGCCCGGGGCGCAAAGCAAGGGCGCAAACTCTaGCCGAGGCGGCGACGGCTGCGGTCGGGGTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: FSARGAKQGRKL*PRRRRLRSGFT Trigger: GGTGAACCCCGACCGCAGCCGTCGCCGCCTCGGGCAGAGTTTGCGCCCTTGCTTTGCGCCCCGGGCGCTGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS GCA 72 bp | GCCATTGTAGTAGGGAAGACCCAGAGGGTTGGCCCCTaGTGCGCCCAGCCCCGCGCTCTTGGCCGCCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AIVVGKTQRVGP*CAQPRALGRRG Trigger: GCCGCGGCGGCCAAGAGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCCCTACTACAATGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS CAA 90 bp | GTGTCGCCGCGGTCGATGGCGGAGCTGATGGCGGGAGCCTCGCTCTaGGCCCTGCGGTCCATCTCGTCGATGACCCCGTGCACCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSPRSMAELMAGASL*ALRSISSMTPCTSG Trigger: CCCCGAGGTGCACGGGGTCATCGACGAGATGGACCGCAGGGCCAAGAGCGAGGCTCCCGCCATCAGCTCCGCCATCGACCGCGGCGACAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS TCA 72 bp | TGGTCGTCTCGGTGTCGCCGCGGTCGATGGCGGAGCTaGTGGCGGGAGCCTCGCTCTTGGCCCTGCGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WSSRCRRGRWRS*WREPRSWPCGP Trigger: TGGACCGCAGGGCCAAGAGCGAGGCTCCCGCCATCAGCTCCGCCATCGACCGCGGCGACACCGAGACGACCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS GCA 72 bp | ATTGTAGTAGGGAAGACCCAGAGGGTTGGCCCCTGCTaGGCCCAGCCCCGCGCTCTTGGCCGCCGCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IVVGKTQRVGPC*AQPRALGRRGC Trigger: GCAGCCGCGGCGGCCAAGAGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCCCTACTACAAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
||
| CDS TCA 72 bp | GGTGCGCCCCCAGCCCAAGGCGACCCTCTTGGGCGCTaGGTCGGCGACTGGAGTAGGGGTTTCTCCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GAPPAQGDPLGR*VGDWSRGFSEA Trigger: GGCTTCGGAGAAACCCCTACTCCAGTCGCCGACTCAGCGCCCAAGAGGGTCGCCTTGGGCTGGGGGCGCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373615.9 |
||
| CDS GCA 72 bp | AGCGGCCGCCGCTGCCACGTCGGCATGGTTGAAGTGTaGGGGGTACTCGCCCTGCAGCAGCGCCTCGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SGRRCHVGMVEV*GVLALQQRLEV Trigger: CACTTCGAGGCGCTGCTGCAGGGCGAGTACCCCGCACACTTCAACCATGCCGACGTGGCAGCGGCGGCCGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
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| CDS CCA 72 bp | TGCCCACGCCATTGTAGTAGGGAAGACCCAGAGGGTTaGCCCCTGCTGCGCCCAGCCCCGCGCTCTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: CPRHCSREDPEG*PLLRPAPRSWP Trigger: CGGCCAAGAGCGCGGGGCTGGGCGCAGCAGGGGCCAACCCTCTGGGTCTTCCCTACTACAATGGCGTGGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
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| CDS CAA 72 bp | CGGTCGATGGCGGAGCTGATGGCGGGAGCCTCGCTCTaGGCCCTGCGGTCCATCTCGTCGATGACCCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: RSMAELMAGASL*ALRSISSMTPC Trigger: GCACGGGGTCATCGACGAGATGGACCGCAGGGCCAAGAGCGAGGCTCCCGCCATCAGCTCCGCCATCGACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373615.9 ENST00000446480.5 |
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| CDS TCA 72 bp | GAGCCTCGCTCTTGGCCCTGCGGTCCATCTCGTCGATaGCCCCGTGCACCTCGGGGCCCGACAGACTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: EPRSWPCGPSRR*PRAPRGPTDCG Trigger: TCCACAGTCTGTCGGGCCCCGAGGTGCACGGGGTCATCGACGAGATGGACCGCAGGGCCAAGAGCGAGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
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| CDS GCA 72 bp | CTCTTGGCCCTGCGGTCCATCTCGTCGATGACCCCGTaGACCTCGGGGCCCGACAGACTGTGGAACAGCATC | + |
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Preference number: 6 (lower is better) Translates to: LLALRSISSMTP*TSGPDRLWNSI Trigger: GATGCTGTTCCACAGTCTGTCGGGCCCCGAGGTGCACGGGGTCATCGACGAGATGGACCGCAGGGCCAAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373615.9 |
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| CDS GCA 72 bp | GCTGGTCACGGTCCAGGTGCTCTGCGTCGTTTTCGTTaGAGCTTAGCGCAGCGTTGTAGGCCGCCAGATCCG | + |
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Preference number: 6 (lower is better) Translates to: AGHGPGALRRFR*SLAQRCRPPDP Trigger: CGGATCTGGCGGCCTACAACGCTGCGCTAAGCTGCAACGAAAACGACGCAGAGCACCTGGACCGTGACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
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| CDS CAA 72 bp | CGAAGCTGGTGGTGCTTGAAGGACGTGCGCATGCGCTaGGTCTTCTGGCTGCTCGGGTATGGCTGGTCACGG | + |
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Preference number: 6 (lower is better) Translates to: RSWWCLKDVRMR*VFWLLGYGWSR Trigger: CCGTGACCAGCCATACCCGAGCAGCCAGAAGACCAAGCGCATGCGCACGTCCTTCAAGCACCACCAGCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
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| CDS CAA 72 bp | AGATGCCTGGAGGACCCGCTTGGTGAGGCCCGTCTTTaGCGCGAGCTGCTTCAAGTCCTTGGCGTCGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: RCLEDPLGEARL*RELLQVLGVGV Trigger: AACCCCGACGCCAAGGACTTGAAGCAGCTCGCGCAAAAGACGGGCCTCACCAAGCGGGTCCTCCAGGCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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| CDS GCA 72 bp | GGCTCTTACGTTTCCTCGGCCGCCCCTTCTGCACAGTaGCCACGCCATTGTAGTAGGGAAGACCCAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GSYVSSAAPSAQ*PRHCSREDPEG Trigger: ACCCTCTGGGTCTTCCCTACTACAATGGCGTGGGCACTGTGCAGAAGGGGCGGCCGAGGAAACGTAAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
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| CDS GCA 72 bp | TTCTGGCTGCTCGGGTATGGCTGGTCACGGTCCAGGTaGTCTGCGTCGTTTTCGTTGCAGCTTAGCGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: FWLLGYGWSRSR*SASFSLQLSAA Trigger: CGCTGCGCTAAGCTGCAACGAAAACGACGCAGAGCACCTGGACCGTGACCAGCCATACCCGAGCAGCCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373615.9 ENST00000446480.5 ENST00000488674.2 |
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| CDS CCA 72 bp | GGCGTTCTGGAACCAGACCTTGCTTCCAGGAGAGTCTaGGAGGCAGAAGATAAATCTAGAGAGATGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GVLEPDLASRRV*EAEDKSREMPG Trigger: TCCAGGCATCTCTCTAGATTTATCTTCTGCCTCCCAGACTCTCCTGGAAGCAAGGTCTGGTTCCAGAACGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488674.2 |
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