Pregenerated sensors for LHX1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000277268, ENSG00000281998Ensembl transcript IDs: ENST00000612281.1, ENST00000614277.1, ENST00000616341.1, ENST00000621428.1, ENST00000632160.1, ENST00000632440.1, ENST00000632992.1, ENST00000633786.1, ENST00000664845.1, ENST00000669023.1, ENST00000671186.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCTCCTTGGGCTGTTCGGAGCAGGAGGGGGCCCAGGCACGGTGCTaGCCGCCGTCCGCGCCGCGCGGGGCCGCGGGTGCCGCCGCCACT | + |
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Preference number: 5 (lower is better) Translates to: CSLGCSEQEGAQARC*PPSAPRGAAGAAAT Trigger: AGTGGCGGCGGCACCCGCGGCCCCGCGCGGCGCGGACGGCGGGCAGCACCGTGCCTGGGCCCCCTCCTGCTCCGAACAGCCCAAGGAGCA 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000612281.1 ENST00000632160.1 ENST00000671186.1 |
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| CDS GCA 90 bp | TTCTGCTCCTTGGGCTGTTCGGAGCAGGAGGGGGCCCAGGCACGGTaGTGCCCGCCGTCCGCGCCGCGCGGGGCCGCGGGTGCCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: FCSLGCSEQEGAQAR*CPPSAPRGAAGAAA Trigger: GGCGGCGGCACCCGCGGCCCCGCGCGGCGCGGACGGCGGGCAGCACCGTGCCTGGGCCCCCTCCTGCTCCGAACAGCCCAAGGAGCAGAA 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000612281.1 ENST00000632160.1 ENST00000671186.1 |
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| CDS GCA 90 bp | GAAGGTCACGATACAACGGAGCAGGAGGGGGCCCAGGCACGGTGCTaGCCGCCGTCCGCGCCGCGCGGGGCCGCGGGTGCCGCCGCCACT | + |
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Preference number: 5 (lower is better) Translates to: EGHDTTEQEGAQARC*PPSAPRGAAGAAAT Trigger: AGTGGCGGCGGCACCCGCGGCCCCGCGCGGCGCGGACGGCGGGCAGCACCGTGCCTGGGCCCCCTCCTGCTCCGTTGTATCGTGACCTTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000616341.1 ENST00000633786.1 |
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| CDS GCA 90 bp | TCAGAAGGTCACGATACAACGGAGCAGGAGGGGGCCCAGGCACGGTaGTGCCCGCCGTCCGCGCCGCGCGGGGCCGCGGGTGCCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SEGHDTTEQEGAQAR*CPPSAPRGAAGAAA Trigger: GGCGGCGGCACCCGCGGCCCCGCGCGGCGCGGACGGCGGGCAGCACCGTGCCTGGGCCCCCTCCTGCTCCGTTGTATCGTGACCTTCTGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000616341.1 ENST00000633786.1 |
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| CDS GCA 90 bp | TACCCAGGCCAGGCACATACCGTGACGCCCCGGCCTGCCGGATGCTaGCCTTTCCTGGCCCTGCGGTCCCTGCTCCCCCTTAACCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: YPGQAHTVTPRPAGC*PFLALRSLLPLNQP Trigger: GGGCTGGTTAAGGGGGAGCAGGGACCGCAGGGCCAGGAAAGGGCAGCATCCGGCAGGCCGGGGCGTCACGGTATGTGCCTGGCCTGGGTA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS GCA 90 bp | CTGGGCGGAGTTTGCGTGGCCTCTGGGACCGGCAGAGTCCAGGGGTaGTCCGGGCTGGCTATTTCCTCCCTCCTCCGGGATGGGTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: LGGVCVASGTGRVQG*SGLAISSLLRDGCS Trigger: GCTACACCCATCCCGGAGGAGGGAGGAAATAGCCAGCCCGGAGCACCCCTGGACTCTGCCGGTCCCAGAGGCCACGCAAACTCCGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000621428.1 ENST00000632160.1 ENST00000632440.1 ENST00000669023.1 ENST00000671186.1 |
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| CDS GCA 90 bp | GTTTACCCAGGCCAGGCACATACCGTGACGCCCCGGCCTGCCGGATaGTGCCCTTTCCTGGCCCTGCGGTCCCTGCTCCCCCTTAACCAG | + |
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Preference number: 5 (lower is better) Translates to: VYPGQAHTVTPRPAG*CPFLALRSLLPLNQ Trigger: CTGGTTAAGGGGGAGCAGGGACCGCAGGGCCAGGAAAGGGCAGCATCCGGCAGGCCGGGGCGTCACGGTATGTGCCTGGCCTGGGTAAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS CCA 90 bp | GTGCCAGGGCCTGTCTCCGAGTCTGGGCGGAGTTTGCGTGGCCTCTaGGACCGGCAGAGTCCAGGGGTGCTCCGGGCTGGCTATTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: VPGPVSESGRSLRGL*DRQSPGVLRAGYFL Trigger: GAGGAAATAGCCAGCCCGGAGCACCCCTGGACTCTGCCGGTCCCAGAGGCCACGCAAACTCCGCCCAGACTCGGAGACAGGCCCTGGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000612281.1 ENST00000632160.1 ENST00000671186.1 |
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| CDS TCA 90 bp | GCTCGTGGGAAGCCAGAGTTGTTTACCCAGGCCAGGCACATACCGTaGCGCCCCGGCCTGCCGGATGCTGCCCTTTCCTGGCCCTGCGGT | + |
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Preference number: 5 (lower is better) Translates to: ARGKPELFTQARHIP*RPGLPDAALSWPCG Trigger: ACCGCAGGGCCAGGAAAGGGCAGCATCCGGCAGGCCGGGGCGTCACGGTATGTGCCTGGCCTGGGTAAACAACTCTGGCTTCCCACGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS CCA 90 bp | TTTGCGTGGCCTCTGGGACCGGCAGAGTCCAGGGGTGCTCCGGGCTaGCTATTTCCTCCCTCCTCCGGGATGGGTGTAGCAGGGTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: FAWPLGPAESRGAPG*LFPPSSGMGVAGCV Trigger: TACACACCCTGCTACACCCATCCCGGAGGAGGGAGGAAATAGCCAGCCCGGAGCACCCCTGGACTCTGCCGGTCCCAGAGGCCACGCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000612281.1 ENST00000621428.1 ENST00000632160.1 ENST00000632440.1 ENST00000671186.1 |
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| CDS TCA 90 bp | TGGCTAGGGGCGGCCATCATCCTCGGGATCAATAGCAGCCGAGAGTaGCTGGGCAGGCTCTGTCCATGGGCCGAGCGTCATTCTGGAACC | + |
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Preference number: 5 (lower is better) Translates to: WLGAAIILGINSSRE*LGRLCPWAERHSGT Trigger: GGTTCCAGAATGACGCTCGGCCCATGGACAGAGCCTGCCCAGTCACTCTCGGCTGCTATTGATCCCGAGGATGATGGCCGCCCCTAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS GCA 90 bp | CCAGAGCCGCTTTTCCACGGGCGCAGAGTCTCCCACCAAACACGCTaGCTCTTTCTCTCAGCACGCACTCGCCTGTCCCAAAGCCGCACA | + |
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Preference number: 5 (lower is better) Translates to: PEPLFHGRRVSHQTR*LFLSARTRLSQSRT Trigger: TGTGCGGCTTTGGGACAGGCGAGTGCGTGCTGAGAGAAAGAGGCAGCGTGTTTGGTGGGAGACTCTGCGCCCGTGGAAAAGCGGCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS GCA 90 bp | GCAGGCAGACTGGGAGCTGGGAGACTGGGTTCAAAGTCCAAGCTATaGTCCAACTTGGCTGACTGGCCAAGGACTGTATCTCTCCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: AGRLGAGRLGSKSKL*SNLADWPRTVSLRV Trigger: GACCCGGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACCCAGTCTCCCAGCTCCCAGTCTGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616341.1 |
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| CDS CCA 90 bp | TTCTGCTCCTTGGGCTGTTCTGGAACCGAAGAGAGAGGAGGGAAATaGCTAGGGGCGGCCATCATCCTCGGGATCAATAGCAGCCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: FCSLGCSGTEERGGK*LGAAIILGINSSRE Trigger: CTCTCGGCTGCTATTGATCCCGAGGATGATGGCCGCCCCTAGCCATTTCCCTCCTCTCTCTTCGGTTCCAGAACAGCCCAAGGAGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS GCA 90 bp | GCAGGCAGACTGGGAGCTGGGAGACTGGGTTCAAAGTCCAAGCTATaGTCCAACTTGGCTGACTGGCCAAGGACTGTATCTCTCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: AGRLGAGRLGSKSKL*SNLADWPRTVSLWV Trigger: GACCCAGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACCCAGTCTCCCAGCTCCCAGTCTGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633786.1 |
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| CDS TCA 90 bp | AGTGGAAAATGTGGGCATGGTGGGTCGCCAAGCAGGAGGTGGAATTaGCATACAGGCGTTTGGGCAGGACCCACCAGGTTTCCAGATGAG | + |
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Preference number: 5 (lower is better) Translates to: SGKCGHGGSPSRRWN*HTGVWAGPTRFPDE Trigger: CTCATCTGGAAACCTGGTGGGTCCTGCCCAAACGCCTGTATGTCAATTCCACCTCCTGCTTGGCGACCCACCATGCCCACATTTTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS CCA 90 bp | GCCCAAAGCAGATCTGAAAGGCTTGAGTGGAAAATGTGGGCATGGTaGGTCGCCAAGCAGGAGGTGGAATTGACATACAGGCGTTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: AQSRSERLEWKMWAW*VAKQEVELTYRRLG Trigger: GCCCAAACGCCTGTATGTCAATTCCACCTCCTGCTTGGCGACCCACCATGCCCACATTTTCCACTCAAGCCTTTCAGATCTGCTTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS CCA 90 bp | TGGGAGCTGGGAGACTGGGTTCAAAGTCCAAGCTATGCTCCAACTTaGCTGACTGGCCAAGGACTGTATCTCTCCGGGTCTCTGTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: WELGDWVQSPSYAPT*LTGQGLYLSGSLFP Trigger: AGGAAACAGAGACCCGGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACCCAGTCTCCCAGCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616341.1 |
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| CDS CCA 90 bp | GGTGCCCAAAGCAGATCTGAAAGGCTTGAGTGGAAAATGTGGGCATaGTGGGTCGCCAAGCAGGAGGTGGAATTGACATACAGGCGTTTG | + |
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Preference number: 5 (lower is better) Translates to: GAQSRSERLEWKMWA*WVAKQEVELTYRRL Trigger: CAAACGCCTGTATGTCAATTCCACCTCCTGCTTGGCGACCCACCATGCCCACATTTTCCACTCAAGCCTTTCAGATCTGCTTTGGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS CCA 90 bp | CCCGGCCCCTCTTCAAGGACGGGCAGGGCTATCAGCCAACCTGTTTaGGAGACAGCTGAATGTCAGCACCAGAAAGTATTGTATCATCTT | + |
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Preference number: 5 (lower is better) Translates to: PGPSSRTGRAISQPV*ETAECQHQKVLYHL Trigger: AAGATGATACAATACTTTCTGGTGCTGACATTCAGCTGTCTCCCAAACAGGTTGGCTGATAGCCCTGCCCGTCCTTGAAGAGGGGCCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS TCA 90 bp | GAATTGACATACAGGCGTTTGGGCAGGACCCACCAGGTTTCCAGATaGGTGGGGAAACGGCATTGGTGTGTATCGGGATTTAGGAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: ELTYRRLGRTHQVSR*VGKRHWCVSGFRRL Trigger: AAGCCTCCTAAATCCCGATACACACCAATGCCGTTTCCCCACTCATCTGGAAACCTGGTGGGTCCTGCCCAAACGCCTGTATGTCAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS TCA 90 bp | AGCTGGGAGACTGGGTTCAAAGTCCAAGCTATGCTCCAACTTGGCTaGCTGGCCAAGGACTGTATCTCTCCGGGTCTCTGTTTCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: SWETGFKVQAMLQLG*LAKDCISPGLCFLI Trigger: AATGAGGAAACAGAGACCCGGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACCCAGTCTCCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616341.1 |
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| CDS TCA 90 bp | TTCAAGGACGGGCAGGGCTATCAGCCAACCTGTTTGGGAGACAGCTaGATGTCAGCACCAGAAAGTATTGTATCATCTTCGCACCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: FKDGQGYQPTCLGDS*MSAPESIVSSSHRW Trigger: CCAGCGGTGCGAAGATGATACAATACTTTCTGGTGCTGACATTCAGCTGTCTCCCAAACAGGTTGGCTGATAGCCCTGCCCGTCCTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS GCA 90 bp | AGCTGCATTCTAAAGGAGGGGCAGGACACAACTCATCCACTCATTTaGTGCACAATAGTTGAACAGCACCGAGTCTGGGCGGAGTTTGCG | + |
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Preference number: 5 (lower is better) Translates to: SCILKEGQDTTHPLI*CTIVEQHRVWAEFA Trigger: CGCAAACTCCGCCCAGACTCGGTGCTGTTCAACTATTGTGCAGCAAATGAGTGGATGAGTTGTGTCCTGCCCCTCCTTTAGAATGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664845.1 |
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| CDS CCA 90 bp | TTCTCTCTGTCTTCAGGTGCCCAAAGCAGATCTGAAAGGCTTGAGTaGAAAATGTGGGCATGGTGGGTCGCCAAGCAGGAGGTGGAATTG | + |
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Preference number: 5 (lower is better) Translates to: FSLSSGAQSRSERLE*KMWAWWVAKQEVEL Trigger: CAATTCCACCTCCTGCTTGGCGACCCACCATGCCCACATTTTCCACTCAAGCCTTTCAGATCTGCTTTGGGCACCTGAAGACAGAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS TCA 90 bp | AGCTGGGAGACTGGGTTCAAAGTCCAAGCTATGCTCCAACTTGGCTaGCTGGCCAAGGACTGTATCTCTCTGGGTCTCTGTTTCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: SWETGFKVQAMLQLG*LAKDCISLGLCFLI Trigger: AATGAGGAAACAGAGACCCAGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACCCAGTCTCCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633786.1 |
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| CDS CCA 90 bp | GCCCGGTCCCTAGGATCCGTTTTTAACCATCCCTGGGCTTCATTTTaGCACGGCAGTACCAAGATTGAGACAAGAAACTCTTCCCTATGC | + |
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Preference number: 5 (lower is better) Translates to: ARSLGSVFNHPWASF*HGSTKIETRNSSLC Trigger: GCATAGGGAAGAGTTTCTTGTCTCAATCTTGGTACTGCCGTGCCAAAATGAAGCCCAGGGATGGTTAAAAACGGATCCTAGGGACCGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS TCA 90 bp | GTAGATCATTTCCATGAGAGAGTGATGGGTGAGATTAAGGCAATTTaGGTCCGGAGAGAACTAGACGGGAAGGAGAGGCGGGAGACCTTG | + |
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Preference number: 5 (lower is better) Translates to: VDHFHERVMGEIKAI*VRRELDGKERRETL Trigger: CAAGGTCTCCCGCCTCTCCTTCCCGTCTAGTTCTCTCCGGACTCAAATTGCCTTAATCTCACCCATCACTCTCTCATGGAAATGATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000621428.1 ENST00000632440.1 ENST00000669023.1 |
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| CDS GCA 90 bp | TTGTTGTCACGCCGTCTTAGACGTTTTATTTATTTGTTGGATTCCTaGCCAGAGCCGCTTTTCCACGGGCGCAGAGTCTCCCACCAAACA | + |
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Preference number: 5 (lower is better) Translates to: LLSRRLRRFIYLLDS*PEPLFHGRRVSHQT Trigger: TGTTTGGTGGGAGACTCTGCGCCCGTGGAAAAGCGGCTCTGGGCAGGAATCCAACAAATAAATAAAACGTCTAAGACGGCGTGACAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS CCA 90 bp | CACATGAGTGGTAGGGACTGTAATTGCCTCAGAGAGTCTGAGGAATaGGAAAGCCCTTCTGGATGTACAGAAGAGAATTCTGGTCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: HMSGRDCNCLRESEE*ESPSGCTEENSGQG Trigger: GCCCTGACCAGAATTCTCTTCTGTACATCCAGAAGGGCTTTCCCATTCCTCAGACTCTCTGAGGCAATTACAGTCCCTACCACTCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616341.1 ENST00000633786.1 |
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| CDS GCA 90 bp | GGCCAAGTCCAATTTAAACAGCAATTGGACTTAACTCCACCCCTGTaGCCCAAATCCTCTGCCACTACCAACGAAGCAGTCATCAGAACT | + |
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Preference number: 5 (lower is better) Translates to: GQVQFKQQLDLTPPL*PKSSATTNEAVIRT Trigger: AGTTCTGATGACTGCTTCGTTGGTAGTGGCAGAGGATTTGGGGCACAGGGGTGGAGTTAAGTCCAATTGCTGTTTAAATTGGACTTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS GCA 90 bp | TTGCTATACGGTTCAGGGGAGACCGTGATACAAGCTGTGAAGTACTaGACACGAGTAGATCATTTCCATGAGAGAGTGATGGGTGAGATT | + |
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Preference number: 5 (lower is better) Translates to: LLYGSGETVIQAVKY*TRVDHFHERVMGEI Trigger: AATCTCACCCATCACTCTCTCATGGAAATGATCTACTCGTGTGCAGTACTTCACAGCTTGTATCACGGTCTCCCCTGAACCGTATAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000621428.1 ENST00000632440.1 ENST00000669023.1 |
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| CDS CCA 90 bp | AAGCTATGCTCCAACTTGGCTGACTGGCCAAGGACTGTATCTCTCTaGGTCTCTGTTTCCTCATTATGTATGAGGTGCAGCTTATTTGAT | + |
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Preference number: 5 (lower is better) Translates to: KLCSNLADWPRTVSL*VSVSSLCMRCSLFD Trigger: ATCAAATAAGCTGCACCTCATACATAATGAGGAAACAGAGACCCAGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633786.1 |
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| CDS GCA 90 bp | TTTTGGCACGGCAGTACCAAGATTGAGACAAGAAACTCTTCCCTATaGTTGCTTTCCTGTGTTCTAAGTTTCTCTCGCTACTTTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: FWHGSTKIETRNSSL*LLSCVLSFSRYFFS Trigger: GGAGAAAAAGTAGCGAGAGAAACTTAGAACACAGGAAAGCAAGCATAGGGAAGAGTTTCTTGTCTCAATCTTGGTACTGCCGTGCCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS GCA 72 bp | GGCCAGGCACATACCGTGACGCCCCGGCCTGCCGGATaGTGCCCTTTCCTGGCCCTGCGGTCCCTGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: GQAHTVTPRPAG*CPFLALRSLLP Trigger: GGGGAGCAGGGACCGCAGGGCCAGGAAAGGGCAGCATCCGGCAGGCCGGGGCGTCACGGTATGTGCCTGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS CCA 72 bp | GGCCTCACCGAGTCTGGGCGGAGTTTGCGTGGCCTCTaGGACCGGCAGAGTCCAGGGGTGCTCCGGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GLTESGRSLRGL*DRQSPGVLRAG Trigger: GCCAGCCCGGAGCACCCCTGGACTCTGCCGGTCCCAGAGGCCACGCAAACTCCGCCCAGACTCGGTGAGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000621428.1 ENST00000632440.1 ENST00000669023.1 |
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| CDS CCA 72 bp | CCTGTCTCCGAGTCTGGGCGGAGTTTGCGTGGCCTCTaGGACCGGCAGAGTCCAGGGGTGCTCCGGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PVSESGRSLRGL*DRQSPGVLRAG Trigger: GCCAGCCCGGAGCACCCCTGGACTCTGCCGGTCCCAGAGGCCACGCAAACTCCGCCCAGACTCGGAGACAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000612281.1 ENST00000632160.1 ENST00000671186.1 |
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| CDS CCA 72 bp | GCCAGGGCCTGTCTCCGAGTCTGGGCGGAGTTTGCGTaGCCTCTGGGACCGGCAGAGTCCAGGGGTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ARACLRVWAEFA*PLGPAESRGAP Trigger: CGGAGCACCCCTGGACTCTGCCGGTCCCAGAGGCCACGCAAACTCCGCCCAGACTCGGAGACAGGCCCTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000612281.1 ENST00000632160.1 ENST00000671186.1 |
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| CDS GCA 72 bp | TGGTGCCAGGGCCTGTCTCCGAGTCTGGGCGGAGTTTaGGTGGCCTCTGGGACCGGCAGAGTCCAGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: WCQGLSPSLGGV*VASGTGRVQGC Trigger: GCACCCCTGGACTCTGCCGGTCCCAGAGGCCACGCAAACTCCGCCCAGACTCGGAGACAGGCCCTGGCACCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000612281.1 ENST00000632160.1 ENST00000671186.1 |
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| CDS GCA 72 bp | GTTTGCGTGGCCTCTGGGACCGGCAGAGTCCAGGGGTaGTCCGGGCTGGCTATTTCCTCCCTCCTCCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: VCVASGTGRVQG*SGLAISSLLRD Trigger: ATCCCGGAGGAGGGAGGAAATAGCCAGCCCGGAGCACCCCTGGACTCTGCCGGTCCCAGAGGCCACGCAAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000621428.1 ENST00000632160.1 ENST00000632440.1 ENST00000669023.1 ENST00000671186.1 |
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| CDS CCA 72 bp | CCTCTGGGACCGGCAGAGTCCAGGGGTGCTCCGGGCTaGCTATTTCCTCCCTCCTCCGGGATGGGTGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: PLGPAESRGAPG*LFPPSSGMGVA Trigger: TGCTACACCCATCCCGGAGGAGGGAGGAAATAGCCAGCCCGGAGCACCCCTGGACTCTGCCGGTCCCAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000621428.1 ENST00000632160.1 ENST00000632440.1 ENST00000669023.1 ENST00000671186.1 |
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| CDS GCA 72 bp | CCAGGCGCCTCCTTTCACGGCCTTGTCACTCTTTTCTaGTCCTTGGGCTGTTCGGAGCAGGAGGGGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGASFHGLVTLF*SLGCSEQEGAQ Trigger: CTGGGCCCCCTCCTGCTCCGAACAGCCCAAGGAGCAGAAAAGAGTGACAAGGCCGTGAAAGGAGGCGCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000612281.1 ENST00000632160.1 ENST00000671186.1 |
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| CDS CAA 90 bp | AACCTCCTAGAGCCGGCTACGCCCCAGGCGCCTCCTTTCACGGCCTaGTCACTCTTTTCTGCTCCTTGGGCTGTTCGGAGCAGGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: NLLEPATPQAPPFTA*SLFSAPWAVRSRRG Trigger: CCCCCTCCTGCTCCGAACAGCCCAAGGAGCAGAAAAGAGTGACAAGGCCGTGAAAGGAGGCGCCTGGGGCGTAGCCGGCTCTAGGAGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000612281.1 ENST00000632160.1 ENST00000671186.1 |
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| CDS CAA 72 bp | CGGAGAGAACTAGACGGGAAGGAGAGGCGGGAGACCTaGGCGCTCAGATCCGAGCGACCTTATCCACGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RRELDGKERRET*ALRSERPYPRS Trigger: ACTGCGTGGATAAGGTCGCTCGGATCTGAGCGCCAAGGTCTCCCGCCTCTCCTTCCCGTCTAGTTCTCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000621428.1 ENST00000632440.1 ENST00000669023.1 |
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| CDS GCA 72 bp | CTTTTCCACGGGCGCAGAGTCTCCCACCAAACACGCTaGCTCTTTCTCTCAGCACGCACTCGCCTGTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LFHGRRVSHQTR*LFLSARTRLSQ Trigger: TTGGGACAGGCGAGTGCGTGCTGAGAGAAAGAGGCAGCGTGTTTGGTGGGAGACTCTGCGCCCGTGGAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS CAA 90 bp | AACCTCCTAGAGCCGGCTACGCCCCAGGCGCCTCCTTTCACGGCCTaGTCACTCTTTTCTGCTCCTTGGGCTGTTCTGGAACCGAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NLLEPATPQAPPFTA*SLFSAPWAVLEPKR Trigger: TCTCTTCGGTTCCAGAACAGCCCAAGGAGCAGAAAAGAGTGACAAGGCCGTGAAAGGAGGCGCCTGGGGCGTAGCCGGCTCTAGGAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS TCA 72 bp | TGTGGGCATGGTGGGTCGCCAAGCAGGAGGTGGAATTaGCATACAGGCGTTTGGGCAGGACCCACCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CGHGGSPSRRWN*HTGVWAGPTRF Trigger: AAACCTGGTGGGTCCTGCCCAAACGCCTGTATGTCAATTCCACCTCCTGCTTGGCGACCCACCATGCCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS CAA 72 bp | ATGTGGGCATGGTGGGTCGCCAAGCAGGAGGTGGAATaGACATACAGGCGTTTGGGCAGGACCCACCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: MWAWWVAKQEVE*TYRRLGRTHQV Trigger: AACCTGGTGGGTCCTGCCCAAACGCCTGTATGTCAATTCCACCTCCTGCTTGGCGACCCACCATGCCCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS CAA 72 bp | TGCTCTGACCTAGGGATCTCGGACAAGCCTCCTAACTaGGGCCTCCTGGCCGGGAAAGTGGAGATAGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: CSDLGISDKPPN*GLLAGKVEIVP Trigger: GGGTACTATCTCCACTTTCCCGGCCAGGAGGCCCAAGTTAGGAGGCTTGTCCGAGATCCCTAGGTCAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000621428.1 ENST00000632440.1 ENST00000669023.1 |
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| CDS CAA 90 bp | CTGGGAGCTGGGAGACTGGGTTCAAAGTCCAAGCTATGCTCCAACTaGGCTGACTGGCCAAGGACTGTATCTCTCCGGGTCTCTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGAGRLGSKSKLCSN*ADWPRTVSLRVSVS Trigger: GGAAACAGAGACCCGGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACCCAGTCTCCCAGCTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616341.1 |
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| CDS TCA 72 bp | TACAGGCGTTTGGGCAGGACCCACCAGGTTTCCAGATaGGTGGGGAAACGGCATTGGTGTGTATCGGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: YRRLGRTHQVSR*VGKRHWCVSGF Trigger: AAATCCCGATACACACCAATGCCGTTTCCCCACTCATCTGGAAACCTGGTGGGTCCTGCCCAAACGCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS CCA 72 bp | GCCCAAAGCAGATCTGAAAGGCTTGAGTGGAAAATGTaGGCATGGTGGGTCGCCAAGCAGGAGGTGGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: AQSRSERLEWKM*AWWVAKQEVEL Trigger: CAATTCCACCTCCTGCTTGGCGACCCACCATGCCCACATTTTCCACTCAAGCCTTTCAGATCTGCTTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS CCA 72 bp | ACGTACTCGCCAGGCAAAAGTGGCGATAGCTCCTTCTaGAATCAAGTGAGGCATCTGGGAAAGCTCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TYSPGKSGDSSF*NQVRHLGKLLE Trigger: CTCCAGGAGCTTTCCCAGATGCCTCACTTGATTCCAGAAGGAGCTATCGCCACTTTTGCCTGGCGAGTACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000614277.1 ENST00000632992.1 ENST00000664845.1 |
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| CDS CCA 72 bp | GGTGCCCGGTCCCTAGGATCCGTTTTTAACCATCCCTaGGCTTCATTTTGGCACGGCAGTACCAAGATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GARSLGSVFNHP*ASFWHGSTKIE Trigger: CTCAATCTTGGTACTGCCGTGCCAAAATGAAGCCCAGGGATGGTTAAAAACGGATCCTAGGGACCGGGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS CAA 72 bp | CTCTGTCTTCAGGTGCCCAAAGCAGATCTGAAAGGCTaGAGTGGAAAATGTGGGCATGGTGGGTCGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LCLQVPKADLKG*SGKCGHGGSPS Trigger: GCTTGGCGACCCACCATGCCCACATTTTCCACTCAAGCCTTTCAGATCTGCTTTGGGCACCTGAAGACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS CAA 72 bp | GGGAGACTGGGTTCAAAGTCCAAGCTATGCTCCAACTaGGCTGACTGGCCAAGGACTGTATCTCTCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GRLGSKSKLCSN*ADWPRTVSLWV Trigger: GACCCAGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACCCAGTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633786.1 |
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| CDS CAA 90 bp | GATGATTCTCTCTGTCTTCAGGTGCCCAAAGCAGATCTGAAAGGCTaGAGTGGAAAATGTGGGCATGGTGGGTCGCCAAGCAGGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: DDSLCLQVPKADLKG*SGKCGHGGSPSRRW Trigger: CCACCTCCTGCTTGGCGACCCACCATGCCCACATTTTCCACTCAAGCCTTTCAGATCTGCTTTGGGCACCTGAAGACAGAGAGAATCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS GCA 72 bp | CGCCGTCTTAGACGTTTTATTTATTTGTTGGATTCCTaGCCAGAGCCGCTTTTCCACGGGCGCAGAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRLRRFIYLLDS*PEPLFHGRRVS Trigger: GGAGACTCTGCGCCCGTGGAAAAGCGGCTCTGGGCAGGAATCCAACAAATAAATAAAACGTCTAAGACGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS GCA 72 bp | CTAAAGGAGGGGCAGGACACAACTCATCCACTCATTTaGTGCACAATAGTTGAACAGCACCGAGTCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LKEGQDTTHPLI*CTIVEQHRVWA Trigger: CGCCCAGACTCGGTGCTGTTCAACTATTGTGCAGCAAATGAGTGGATGAGTTGTGTCCTGCCCCTCCTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664845.1 |
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| CDS CCA 72 bp | GGTTCAAAGTCCAAGCTATGCTCCAACTTGGCTGACTaGCCAAGGACTGTATCTCTCCGGGTCTCTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSKSKLCSNLAD*PRTVSLRVSVS Trigger: GGAAACAGAGACCCGGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616341.1 |
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| CDS CCA 72 bp | CCTCCTTTCACGGCCTTGTCACTCTTTTCTGCTCCTTaGGCTGTTCTGGAACCGAAGAGAGAGGAGGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PPFTALSLFSAP*AVLEPKREEGN Trigger: ATTTCCCTCCTCTCTCTTCGGTTCCAGAACAGCCCAAGGAGCAGAAAAGAGTGACAAGGCCGTGAAAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000621428.1 ENST00000632440.1 |
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| CDS CAA 90 bp | AGCCAACCTGTTTGGGAGACAGCTGAATGTCAGCACCAGAAAGTATaGTATCATCTTCGCACCGCTGGAGTCAGGAAGTGGGGTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SQPVWETAECQHQKV*YHLRTAGVRKWGLQ Trigger: CTGGAGACCCCACTTCCTGACTCCAGCGGTGCGAAGATGATACAATACTTTCTGGTGCTGACATTCAGCTGTCTCCCAAACAGGTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS CAA 90 bp | TTGAGAGCTGTTTGGGAGACAGCTGAATGTCAGCACCAGAAAGTATaGTATCATCTTCGCACCGCTGGAGTCAGGAAGTGGGGTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRAVWETAECQHQKV*YHLRTAGVRKWGLQ Trigger: CTGGAGACCCCACTTCCTGACTCCAGCGGTGCGAAGATGATACAATACTTTCTGGTGCTGACATTCAGCTGTCTCCCAAACAGCTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612281.1 ENST00000632160.1 |
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| CDS TCA 72 bp | TTCCATGAGAGAGTGATGGGTGAGATTAAGGCAATTTaGGTCCGGAGAGAACTAGACGGGAAGGAGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: FHERVMGEIKAI*VRRELDGKERR Trigger: CCGCCTCTCCTTCCCGTCTAGTTCTCTCCGGACTCAAATTGCCTTAATCTCACCCATCACTCTCTCATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000621428.1 ENST00000632440.1 ENST00000669023.1 |
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| CDS TCA 72 bp | ACTGGGTTCAAAGTCCAAGCTATGCTCCAACTTGGCTaGCTGGCCAAGGACTGTATCTCTCTGGGTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TGFKVQAMLQLG*LAKDCISLGLC Trigger: ACAGAGACCCAGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633786.1 |
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| CDS CCA 72 bp | AGCAGATCTGAAAGGCTTGAGTGGAAAATGTGGGCATaGTGGGTCGCCAAGCAGGAGGTGGAATTGACATAC | + |
|
Preference number: 6 (lower is better) Translates to: SRSERLEWKMWA*WVAKQEVELTY Trigger: GTATGTCAATTCCACCTCCTGCTTGGCGACCCACCATGCCCACATTTTCCACTCAAGCCTTTCAGATCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 ENST00000669023.1 |
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| CDS CCA 72 bp | GGTTCAAAGTCCAAGCTATGCTCCAACTTGGCTGACTaGCCAAGGACTGTATCTCTCTGGGTCTCTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSKSKLCSNLAD*PRTVSLWVSVS Trigger: GGAAACAGAGACCCAGAGAGATACAGTCCTTGGCCAGTCAGCCAAGTTGGAGCATAGCTTGGACTTTGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633786.1 |
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| CDS CCA 72 bp | TCTTCAAGGACGGGCAGGGCTATCAGCCAACCTGTTTaGGAGACAGCTGAATGTCAGCACCAGAAAGTATTG | + |
|
Preference number: 6 (lower is better) Translates to: SSRTGRAISQPV*ETAECQHQKVL Trigger: CAATACTTTCTGGTGCTGACATTCAGCTGTCTCCCAAACAGGTTGGCTGATAGCCCTGCCCGTCCTTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS TCA 72 bp | CAGGCAAAAGTGGCGATAGCTCCTTCTGGAATCAAGTaGGGCATCTGGGAAAGCTCCTGGAGAAGTGATATC | + |
|
Preference number: 6 (lower is better) Translates to: QAKVAIAPSGIK*GIWESSWRSDI Trigger: GATATCACTTCTCCAGGAGCTTTCCCAGATGCCTCACTTGATTCCAGAAGGAGCTATCGCCACTTTTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000614277.1 ENST00000632992.1 ENST00000664845.1 |
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| CDS TCA 72 bp | GGGCAGGGCTATCAGCCAACCTGTTTGGGAGACAGCTaGATGTCAGCACCAGAAAGTATTGTATCATCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: GQGYQPTCLGDS*MSAPESIVSSS Trigger: CGAAGATGATACAATACTTTCTGGTGCTGACATTCAGCTGTCTCCCAAACAGGTTGGCTGATAGCCCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS GCA 72 bp | ATTGGACTTAACTCCACCCCTGTGCCCCAAATCCTCTaGCACTACCAACGAAGCAGTCATCAGAACTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: IGLNSTPVPQIL*HYQRSSHQNCL Trigger: AAGACAGTTCTGATGACTGCTTCGTTGGTAGTGGCAGAGGATTTGGGGCACAGGGGTGGAGTTAAGTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS CAA 72 bp | GTTTGGGAGACAGCTGAATGTCAGCACCAGAAAGTATaGTATCATCTTCGCACCGCTGGAGTCAGGAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VWETAECQHQKV*YHLRTAGVRKW Trigger: CCACTTCCTGACTCCAGCGGTGCGAAGATGATACAATACTTTCTGGTGCTGACATTCAGCTGTCTCCCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000612281.1 ENST00000632160.1 ENST00000671186.1 |
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| CDS CAA 72 bp | GCTGGGAAGCTGGGCTCTTCATCTACACGACCAAACTaGAACATGAGCAAGATGGTAGGACCACCAATAACC | + |
|
Preference number: 6 (lower is better) Translates to: AGKLGSSSTRPN*NMSKMVGPPIT Trigger: GGTTATTGGTGGTCCTACCATCTTGCTCATGTTCAAGTTTGGTCGTGTAGATGAAGAGCCCAGCTTCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS TCA 72 bp | CCATCCCCTTCATTTCCATTTTACAGGCAAGACAACTaGGGTTCAGAAGGTCACGATACAACGGAGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSPSFPFYRQDN*GSEGHDTTEQE Trigger: CTCCTGCTCCGTTGTATCGTGACCTTCTGAACCTCAGTTGTCTTGCCTGTAAAATGGAAATGAAGGGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000616341.1 ENST00000633786.1 |
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| CDS GCA 72 bp | GATTTAGGAGGCTTAGCAACCTTCCCTTCAAAGTCATaGCCCAGATTGAGAGCTGTTTGGGAGACAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: DLGGLATFPSKS*PRLRAVWETAE Trigger: TTCAGCTGTCTCCCAAACAGCTCTCAATCTGGGGCATGACTTTGAAGGGAAGGTTGCTAAGCCTCCTAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612281.1 ENST00000632160.1 |
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| CDS GCA 72 bp | GGTTCAGGGGAGACCGTGATACAAGCTGTGAAGTACTaGACACGAGTAGATCATTTCCATGAGAGAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSGETVIQAVKY*TRVDHFHERVM Trigger: CATCACTCTCTCATGGAAATGATCTACTCGTGTGCAGTACTTCACAGCTTGTATCACGGTCTCCCCTGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000621428.1 ENST00000632440.1 ENST00000669023.1 |
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| CDS GCA 72 bp | GATTTAGGAGGCTTAGCAACCTTCCCTTCAAAGTCATaGCCCAGATTGAGAGAAATCTTAGTCGTGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DLGGLATFPSKS*PRLREILVVRC Trigger: GCAGCGCACGACTAAGATTTCTCTCAATCTGGGGCATGACTTTGAAGGGAAGGTTGCTAAGCCTCCTAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664845.1 |
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| CDS GCA 72 bp | CAATTTAAACAGCAATTGGACTTAACTCCACCCCTGTaGCCCAAATCCTCTGCCACTACCAACGAAGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QFKQQLDLTPPL*PKSSATTNEAV Trigger: GACTGCTTCGTTGGTAGTGGCAGAGGATTTGGGGCACAGGGGTGGAGTTAAGTCCAATTGCTGTTTAAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS TCA 72 bp | GTCATGCCCCAGATTGAGAGCTGTTTGGGAGACAGCTaGATGTCAGCACCAGAAAGTATTGTATCATCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: VMPQIESCLGDS*MSAPESIVSSS Trigger: CGAAGATGATACAATACTTTCTGGTGCTGACATTCAGCTGTCTCCCAAACAGCTCTCAATCTGGGGCATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612281.1 ENST00000632160.1 |
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| CDS CCA 72 bp | GGTAGGGACTGTAATTGCCTCAGAGAGTCTGAGGAATaGGAAAGCCCTTCTGGATGTACAGAAGAGAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRDCNCLRESEE*ESPSGCTEENS Trigger: AGAATTCTCTTCTGTACATCCAGAAGGGCTTTCCCATTCCTCAGACTCTCTGAGGCAATTACAGTCCCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616341.1 ENST00000633786.1 |
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| CDS CAA 90 bp | AAACTAAGAGCTGGGAAGCTGGGCTCTTCATCTACACGACCAAACTaGAACATGAGCAAGATGGTAGGACCACCAATAACCATCCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: KLRAGKLGSSSTRPN*NMSKMVGPPITILQ Trigger: TTGTAGGATGGTTATTGGTGGTCCTACCATCTTGCTCATGTTCAAGTTTGGTCGTGTAGATGAAGAGCCCAGCTTCCCAGCTCTTAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS TCA 72 bp | GGAATGGCACGTGCAAAGTTTCTGACTCTTGAAAGATaGTTCTCTCTGTCTTCAGGTGCCCAAAGCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: GMARAKFLTLER*FSLSSGAQSRS Trigger: AGATCTGCTTTGGGCACCTGAAGACAGAGAGAATCATCTTTCAAGAGTCAGAAACTTTGCACGTGCCATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000612281.1 ENST00000614277.1 ENST00000632160.1 ENST00000632992.1 ENST00000664845.1 |
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| CDS TCA 72 bp | TCTTATGGGGAAACTATATCCTTCCTGGAGCCTAAATaGGAACAACCTTGCACACAGTTACAGGCTTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SYGETISFLEPK*EQPCTQLQACQ Trigger: CTGGCAAGCCTGTAACTGTGTGCAAGGTTGTTCTCATTTAGGCTCCAGGAAGGATATAGTTTCCCCATAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS GCA 72 bp | TCTCTCTGGGTCTCTGTTTCCTCATTATGTATGAGGTaGAGCTTATTTGATCCAGTGGGAGTGCTAACCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLWVSVSSLCMR*SLFDPVGVLTI Trigger: GATGGTTAGCACTCCCACTGGATCAAATAAGCTGCACCTCATACATAATGAGGAAACAGAGACCCAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633786.1 |
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| CDS CCA 72 bp | CTAGGATCCGTTTTTAACCATCCCTGGGCTTCATTTTaGCACGGCAGTACCAAGATTGAGACAAGAAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGSVFNHPWASF*HGSTKIETRNS Trigger: AGAGTTTCTTGTCTCAATCTTGGTACTGCCGTGCCAAAATGAAGCCCAGGGATGGTTAAAAACGGATCCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS TCA 72 bp | TGCAAAATGCTTCCTTCCTTACCAGCCACTGGGCAGTaGAAAGAAATCACATTTAGTCCCCTGAATAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: CKMLPSLPATGQ*KEITFSPLNRW Trigger: CCATCTATTCAGGGGACTAAATGTGATTTCTTTTCACTGCCCAGTGGCTGGTAAGGAAGGAAGCATTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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| CDS GCA 72 bp | GGCAGTACCAAGATTGAGACAAGAAACTCTTCCCTATaGTTGCTTTCCTGTGTTCTAAGTTTCTCTCGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: GSTKIETRNSSL*LLSCVLSFSRY Trigger: GTAGCGAGAGAAACTTAGAACACAGGAAAGCAAGCATAGGGAAGAGTTTCTTGTCTCAATCTTGGTACTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671186.1 |
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