RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LHX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000273706, ENSG00000274577

Ensembl transcript IDs: ENST00000614239.1, ENST00000616237.1, ENST00000619297.1, ENST00000619939.4, ENST00000620305.2, ENST00000621767.1, ENST00000631483.1, ENST00000631517.1, ENST00000633397.1, ENST00000634033.1, ENST00000673652.1

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTaGACGTCTTTTCGCCGCCCGCCTGCCAGGCGCACACGCCCGCGG +
Preference number: 1 (lower is better)
Translates to: TAPGIANGCAHPRLP*TSFRRPPARRTRPR
Trigger: CCGCGGGCGTGTGCGCCTGGCAGGCGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 90 bp CTGTGCGCACCCGCGGCTGCCCTGGACGTCTTTTCGCCGCCCGCCTaGCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCC +
Preference number: 1 (lower is better)
Translates to: LCAPAAALDVFSPPA*QAHTPAGSVYGSGS
Trigger: GGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 90 bp TCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTaGCCTGGACGTCTTTTCGCCGCCCGCCTGCCAGGCGCACACGCC +
Preference number: 1 (lower is better)
Translates to: SPRLLASPTAVRTRG*PGRLFAARLPGAHA
Trigger: GGCGTGTGCGCCTGGCAGGCGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 90 bp GCTCACGGCCTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTaGGCACCCGCGGCTGCCCTGGACGTCTTTTCGCCGCCCGCCTGC +
Preference number: 1 (lower is better)
Translates to: AHGLPPHGSWHRQRL*APAAALDVFSPPAC
Trigger: GCAGGCGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAGGCCGTGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 90 bp TGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTaGTCACGGCCTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCT +
Preference number: 1 (lower is better)
Translates to: WPGSALGRFTSFTRL*SRPPSPRLLASPTA
Trigger: AGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR CCA 90 bp GGATATCCCAGAGCTAGAACCCTCCTGGCTGGCCCGGGAGCGCCCTaGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCACGGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: GYPRARTLLAGPGAP*AASLPSPGCAHGLP
Trigger: AGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCCAGGAGGGTTCTAGCTCTGGGATATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 90 bp CTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTaGGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTT +
Preference number: 1 (lower is better)
Translates to: LRFLWGAPVLHVDSQ*ADPSPTSRPIWILF
Trigger: AAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR CCA 90 bp TCTGAGACAACACTAATAAGGGATATCCCAGAGCTAGAACCCTCCTaGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCG +
Preference number: 1 (lower is better)
Translates to: SETTLIRDIPELEPS*LARERPGPLHFLHP
Trigger: CGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCCAGGAGGGTTCTAGCTCTGGGATATCCCTTATTAGTGTTGTCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR GCA 90 bp CTGGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTGGGGAGCCCCAGTTCTaGACGTCGACAGCCAGTGCG +
Preference number: 2 (lower is better)
Translates to: LAGPGAPWAASLPSPGCAGEPQF*TSTASA
Trigger: CGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCC...AGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CCA 90 bp GGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCAACCTCGAGGCCGATTTaGATCCTATTTCGTGTCCCC +
Preference number: 2 (lower is better)
Translates to: GWPGSALGRFTSFTRLCSTSRPI*ILFRVP
Trigger: GGGGACACGAAATAGGATCCAAATCGGCCTCGAGGT...TGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CCA 90 bp CTGGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTACCTCGAGGCCGATTTaGATCCTATTTCGTGTCCCC +
Preference number: 2 (lower is better)
Translates to: LAGPGAPWAASLPSPGCATSRPI*ILFRVP
Trigger: GGGGACACGAAATAGGATCCAAATCGGCCTCGAGGT...AGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CCA 90 bp CCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCAATGGTTCTCGAGGCTaGAGGAAGGGGGTGGGGACT +
Preference number: 2 (lower is better)
Translates to: PLGSPSSARRQPVRGSQSNGSRG*RKGVGT
Trigger: AGTCCCCACCCCCTTCCTCCAGCCTCGAGAACCATT...GGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CCA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTAATGGTTCTCGAGGCTaGAGGAAGGGGGTGGGGACT +
Preference number: 2 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASNGSRG*RKGVGT
Trigger: AGTCCCCACCCCCTTCCTCCAGCCTCGAGAACCATT...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CCA 90 bp GTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGGCTGGAGGAAGGGGGTaGGGACTTGCTTTTTATGTT +
Preference number: 2 (lower is better)
Translates to: VCVSFGEPQFCTSTASARAGGRG*GLAFYV
Trigger: AACATAAAAAGCAAGTCCCCACCCCCTTCCTCCAGC...CCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CCA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCTGGAGGAAGGGGGTaGGGACTTGCTTTTTATGTT +
Preference number: 2 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCAGGRG*GLAFYV
Trigger: AACATAAAAAGCAAGTCCCCACCCCCTTCCTCCAGC...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR TCA 90 bp AGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTGTATATATAGTCCCACCTaGTGCACGGCAGGTCGGCGT +
Preference number: 2 (lower is better)
Translates to: SHFTERSGWRPSYRVCPCIYSPT*CTAGRR
Trigger: ACGCCGACCTGCCGTGCATCAGGTGGGACTATATAT...ACACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR GCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCATCGCCAACGGCTGTaGGCACCCGCGGCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSHRQRL*APAAAL
Trigger: CAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATG...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CCA 90 bp AGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTGTTCCCCAGAAGGAGAATaGTTCTCGAGGCTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: SHFTERSGWRPSYRVCPCSPEGE*FSRLEE
Trigger: TTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGA...ACACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR GCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCACGTCGACAGCCAGTaGGCGGATCCCAGTCCCACC +
Preference number: 2 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSHVDSQ*ADPSPT
Trigger: GGTGGGACTGGGATCCGCGCACTGGCTGTCGACGTG...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR GCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCGGGGAGCCCCAGTTCTaGACGTCGACAGCCAGTGCG +
Preference number: 2 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSGEPQF*TSTASA
Trigger: CGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCC...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 72 bp CCCGCGGCTGCCCTGGACGTCTTTTCGCCGCCCGCCTaGCAGGCGCACACGCCCGCGGGGTCTGTCTACGGA +
Preference number: 3 (lower is better)
Translates to: PAAALDVFSPPA*QAHTPAGSVYG
Trigger: TCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 72 bp CTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTaGCCTGGACGTCTTTTCGCCGCCCGCCTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LLASPTAVRTRG*PGRLFAARLPG
Trigger: GCCTGGCAGGCGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR CCA 72 bp GGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTaGACGTCTTTTCGCCGCCCGCCTGCCAGGCGCACA +
Preference number: 3 (lower is better)
Translates to: GIANGCAHPRLP*TSFRRPPARRT
Trigger: TGTGCGCCTGGCAGGCGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 72 bp CTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTaGGCACCCGCGGCTGCCCTGGACGTCTTTTCGCCG +
Preference number: 3 (lower is better)
Translates to: LPPHGSWHRQRL*APAAALDVFSP
Trigger: CGGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 72 bp AGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTaGTCACGGCCTCCCTCCCCACGGCTCCTGGCATCG +
Preference number: 3 (lower is better)
Translates to: SALGRFTSFTRL*SRPPSPRLLAS
Trigger: CGATGCCAGGAGCCGTGGGGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 72 bp CTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTaGGCGGATCCCAGTCCCACCTCGAGGCCGATTTGG +
Preference number: 3 (lower is better)
Translates to: LWGAPVLHVDSQ*ADPSPTSRPIW
Trigger: CCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 72 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTaGACGTCGACAGCCAGTGCGCGGATCCCAGTCCCA +
Preference number: 3 (lower is better)
Translates to: GEVCVSFGEPQF*TSTASARIPVP
Trigger: TGGGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CAA 90 bp GTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGCACCTCGAGGCCGATTaGGATCCTATTTCGTGTCCC +
Preference number: 3 (lower is better)
Translates to: VCVSFGEPQFCTSTASARHLEAD*DPISCP
Trigger: GGGACACGAAATAGGATCCAAATCGGCCTCGAGGTG...CCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR CCA 72 bp ACACTAATAAGGGATATCCCAGAGCTAGAACCCTCCTaGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTC +
Preference number: 3 (lower is better)
Translates to: TLIRDIPELEPS*LARERPGPLHF
Trigger: GAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCCAGGAGGGTTCTAGCTCTGGGATATCCCTTATTAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CAA 90 bp AGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCCACCTCGAGGCCGATTaGGATCCTATTTCGTGTCCC +
Preference number: 3 (lower is better)
Translates to: RSAFPLGSPSSARRQPVRHLEAD*DPISCP
Trigger: GGGACACGAAATAGGATCCAAATCGGCCTCGAGGTG...GCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR CCA 72 bp CAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTaGATCCTATTTCGTGTCCCCCTTTTCCATCCGGTC +
Preference number: 3 (lower is better)
Translates to: QCADPSPTSRPI*ILFRVPLFHPV
Trigger: GACCGGATGGAAAAGGGGGACACGAAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CAA 90 bp AGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTGTAGGTCTGCGTTTCCTTaGGGGAGCCCCAGTTCTGCA +
Preference number: 3 (lower is better)
Translates to: SHFTERSGWRPSYRVCPCRSAFP*GSPSSA
Trigger: TGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT...ACACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CAA 90 bp AGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTGTGCGAAGGTAGAAGAGTaGATACGGAGGGCTTTACAT +
Preference number: 3 (lower is better)
Translates to: SHFTERSGWRPSYRVCPCAKVEE*IRRALH
Trigger: ATGTAAAGCCCTCCGTATCAACTCTTCTACCTTCGC...ACACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR-3UTR CAA 90 bp GTTCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCTTTTTGTCGCTGTTGTaGAACTCTGAGACAACACTA +
Preference number: 3 (lower is better)
Translates to: VQVILLSGLAGDHLTECVFLSLL*NSETTL
Trigger: TAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA...GACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR GCA 72 bp CAACATGTTTTCTTTCATACAGTGAATGGTCTAATATaGACTGGAGGTCACACAAGCTTAGGTTTATTAGAA +
Preference number: 3 (lower is better)
Translates to: QHVFFHTVNGLI*TGGHTSLGLLE
Trigger: TTCTAATAAACCTAAGCTTGTGTGACCTCCAGTGCATATTAGACCATTCACTGTATGAAAGAAAACATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR CCA 72 bp TGTTTTCTTTCATACAGTGAATGGTCTAATATGCACTaGAGGTCACACAAGCTTAGGTTTATTAGAACAATA +
Preference number: 3 (lower is better)
Translates to: CFLSYSEWSNMH*RSHKLRFIRTI
Trigger: TATTGTTCTAATAAACCTAAGCTTGTGTGACCTCCAGTGCATATTAGACCATTCACTGTATGAAAGAAAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGTTTTCGCCGCCCGCCTaGCAGGCGCACACGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LPTAPGIANGCAHPRLPWFSPPA*QAHTPA
Trigger: CGCGGGCGTGTGCGCCTGGCAGGCGGGCGGCGAAAA...CCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGCATCGCCAACGGCTGTaGGCACCCGCGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRHRQRL*APAAAL
Trigger: CAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATG...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGTCGCTCGACGGGTGGTaGCCCGGCAGCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLPGAHARGVCLRIRVQVSLDGW*PGSGCS
Trigger: GGAGCACCCGCTGCCGGGCCACCACCCGTCGAGCGA...CACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GCCTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCACCCGCGGCTGCCCTaGACGTCTTTTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: ASLPTAPGIANGCAHPRLHPRLP*TSFRRP
Trigger: CGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGGTG...CAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp GGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCATGGAGCGGCGCCGCCTaGGCTCCCGGGGCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GWPGSALGRFTSFTRLCSWSGAA*APGARK
Trigger: TTTCCTCGCCCCGGGAGCTCAGGCGGCGCCGCTCCA...TGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGAGGGACCATTGGGGATaGGCTCGCCCGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPTAPGIANGCAHPRLPWRDHWG*ARPAPG
Trigger: GCCTGGAGCCGGGCGAGCTCATCCCCAATGGTCCCT...CCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGTCGGCCGACATGGAGTaGAGAGGCCCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPTAPGIANGCAHPRLPWSADME*RGPGRL
Trigger: CAGCCTGCCCGGGCCTCTGCACTCCATGTCGGCCGA...CCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGCACGTCGACAGCCAGTaGGCGGATCCCAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: LPTAPGIANGCAHPRLPWHVDSQ*ADPSPT
Trigger: GGTGGGACTGGGATCCGCGCACTGGCTGTCGACGTG...CCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTTTTCGCCGCCCGCCTaGCAGGCGCACACGCCCGCG +
Preference number: 4 (lower is better)
Translates to: HARGVCLRIRVQVGVGERFSPPA*QAHTPA
Trigger: CGCGGGCGTGTGCGCCTGGCAGGCGGGCGGCGAAAA...CCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GCCTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGAGACCTCGGCCGACATaGAGTGCAGAGGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ASLPTAPGIANGCAHPRLRPRPT*SAEARA
Trigger: TGCCCGGGCCTCTGCACTCCATGTCGGCCGAGGTCT...CAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGACCTAGGGGAGATGCCCTaGGCGCAGCCTGCGCATTTG +
Preference number: 4 (lower is better)
Translates to: PHGSWHRQRLCAPAAALDLGEMP*AQPAHL
Trigger: CAAATGCGCAGGCTGCGCTCAGGGCATCTCCCCTAG...GTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GCCTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGGTGTGCGTGCCAGGCTaGCCACCACTGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: ASLPTAPGIANGCAHPRLVCVPG*PPLGFP
Trigger: GGGAAATCCCAGTGGTGGGCAGCCTGGCACGCACAC...CAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGGAACTCCGCAGACCGTaGGAGACCCCGCTACCACAC +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRELRRP*ETPLPH
Trigger: GTGTGGTAGCGGGGTCTCGCACGGTCTGCGGAGTTC...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGGGAGCCCCAGTTCTaGACGTCGACAGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: RLPGAHARGVCLRIRVQVGEPQF*TSTASA
Trigger: CGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCC...CACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCCATCGCCAACGGCTGTaGGCACCCGCGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVHRQRL*APAAAL
Trigger: CAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATG...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGGTCACTGCCCGTaGTGGCCGAGTGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRWGHCP*WPSEGC
Trigger: ACAGCCTTCACTCGGCCACCACGGGCAGTGACCCCA...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCGCGGTCCCCGCCGCTTaGCGCCCAGGTTCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVAVPAA*RPGSGR
Trigger: ACGACCAGAACCTGGGCGCCAAGCGGCGGGGACCGC...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCGGGCGAGTCCCCGGGTaGGTGCGCCAGGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVGRVPG*VRQDVG
Trigger: ACCGACATCCTGGCGCACCCACCCGGGGACTCGCCC...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCAGAGCTAGAACCCTCCTaGCTGGCCCGGGAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: GWPGSALGRFTSFTRLCSELEPS*LARERP
Trigger: AGGGCGCTCCCGGGCCAGCCAGGAGGGTTCTAGCTC...TGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CTGGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTGAGCTAGAACCCTCCTaGCTGGCCCGGGAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LAGPGAPWAASLPSPGCAELEPS*LARERP
Trigger: AGGGCGCTCCCGGGCCAGCCAGGAGGGTTCTAGCTC...AGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCTGGAGCGGCGCCGCCTaGGCTCCCGGGGCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PLGSPSSARRQPVRGSQSWSGAA*APGARK
Trigger: TTTCCTCGCCCCGGGAGCTCAGGCGGCGCCGCTCCA...GGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCCCGTGGTGGCCGAGTaGAGGCTGTTCTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LPPHGSWHRQRLCAPAAAPVVAE*RLFSLA
Trigger: TGCCAAAGAGAACAGCCTTCACTCGGCCACCACGGG...GGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGCCCGTGGTGGCCGAGTaGAGGCTGTTCTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LPTAPGIANGCAHPRLPWPVVAE*RLFSLA
Trigger: TGCCAAAGAGAACAGCCTTCACTCGGCCACCACGGG...CCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GCCTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGGAAAGCGGTCCAGGATaGGCCTTTTGCAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: ASLPTAPGIANGCAHPRLESGPG*AFCSRH
Trigger: GTGCCGGCTGCAAAAGGCCCATCCTGGACCGCTTTC...CAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCAGCTCGCCCCACCGTTaGCCGACAGCGACGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVSSPHR*PTATRR
Trigger: CCTTCTCGTCGCTGTCGGTCAACGGTGGGGCGAGCT...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTCAGGCGGGAGAGAATaGGACCCTTCTGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRSGGRE*DPSAQS
Trigger: GCTCTGAGCAGAAGGGTCGCATTCTCTCCCGCCTGA...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCACGGCCTCCCTCCCGTCTCAGTGAAGTGTaGAGCCGGGGAGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SALGRFTSFTRLCSRPPSRLSEV*SRGVPG
Trigger: CCCCGGGACTCCCCGGCTGCACACTTCACTGAGACG...GGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCATGGACGCACTTGACGTaGCAGGCCCTGTCCAGCACG +
Preference number: 4 (lower is better)
Translates to: GWPGSALGRFTSFTRLCSWTHLT*QALSST
Trigger: CGTGCTGGACAGGGCCTGGCACGTCAAGTGCGTCCA...TGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGACAAACTGGGGTCACTaGCCGTGGTGGCCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRTNWGH*PWWPSE
Trigger: TTCACTCGGCCACCACGGGCAGTGACCCCAGTTTGT...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGGCCGACATGGAGTaGAGAGGCCCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: WGAPVLHVDSQCADPSPTSADME*RGPGRL
Trigger: CAGCCTGCCCGGGCCTCTGCACTCCATGTCGGCCGA...GGTGGGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTGGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTGAACTCCGCAGACCGTaGGAGACCCCGCTACCACAC +
Preference number: 4 (lower is better)
Translates to: LAGPGAPWAASLPSPGCAELRRP*ETPLPH
Trigger: GTGTGGTAGCGGGGTCTCGCACGGTCTGCGGAGTTC...AGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGAGACCTCGGCCGACATaGAGTGCAGAGGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: HARGVCLRIRVQVGVGERRPRPT*SAEARA
Trigger: TGCCCGGGCCTCTGCACTCCATGTCGGCCGAGGTCT...CCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGGAGTTCTCCGGGGCTTaGGGTAGAGCTGTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSREFSGA*GRAVRS
Trigger: ACTTCTGACAGCTCTACCTCAAGCCCCGGAGAACTC...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp AGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCACGGCCTCCCTCCCTAGGGGAGATGCCCTaGGCGCAGCCTGCGCATTTG +
Preference number: 4 (lower is better)
Translates to: SALGRFTSFTRLCSRPPSLGEMP*AQPAHL
Trigger: CAAATGCGCAGGCTGCGCTCAGGGCATCTCCCCTAG...GGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGATATATAGTCCCACCTaGTGCACGGCAGGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRIYSPT*CTAGRR
Trigger: ACGCCGACCTGCCGTGCATCAGGTGGGACTATATAT...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCACGGCCTCCCTCCATGAGGGCGACTGTGTaGGTGCCAGGCTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SALGRFTSFTRLCSRPPSMRATV*VPGCPP
Trigger: TGGTGGGCAGCCTGGCACGCACACAGTCGCCCTCAT...GGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGTCAGGCGGGAGAGAATaGGACCCTTCTGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RLPGAHARGVCLRIRVQVSGGRE*DPSAQS
Trigger: GCTCTGAGCAGAAGGGTCGCATTCTCTCCCGCCTGA...CACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCTGGACGCACTTGACGTaGCAGGCCCTGTCCAGCACG +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVWTHLT*QALSST
Trigger: CGTGCTGGACAGGGCCTGGCACGTCAAGTGCGTCCA...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGACCGCAGCCTGCGCATTTaGTACCGAAACACCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PHGSWHRQRLCAPAAALDRSLRI*YRNTGR
Trigger: TCTTCCGGTGTTTCGGTACCAAATGCGCAGGCTGCG...GTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGCGCAGCCTGCGCATTTaGTACCGAAACACCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRRSLRI*YRNTGR
Trigger: TCTTCCGGTGTTTCGGTACCAAATGCGCAGGCTGCG...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGTCCTGCGACGGGTCTTaGGAATCCGGAGACAAACTG +
Preference number: 4 (lower is better)
Translates to: LPTAPGIANGCAHPRLPWSCDGS*ESGDKL
Trigger: CAGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGA...CCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp ACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCGAGCCCGCGGAGGAGTaGAGGTCAGCGAGAACGGCG +
Preference number: 4 (lower is better)
Translates to: TSTASARIPVPPRGRFGSEPAEE*RSARTA
Trigger: CGCCGTTCTCGCTGACCTTCACTCCTCCGCGGGCTC...GGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCTTCTGGAACCAGACCTaGATGACGCGCATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LPPHGSWHRQRLCAPAAAFWNQT*MTRMLR
Trigger: CCTCAACATGCGCGTCATTCAGGTCTGGTTCCAGAA...GGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp ACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCGGGCGACTGTGTGCGTaGCAGGCTGCCCACCACTGG +
Preference number: 4 (lower is better)
Translates to: TSTASARIPVPPRGRFGSGRLCA*QAAHHW
Trigger: CCAGTGGTGGGCAGCCTGGCACGCACACAGTCGCCC...GGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGAGAATGCGACCCTTCTaGTCAGAGCCCGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HARGVCLRIRVQVGVGERRMRPF*SEPAEE
Trigger: CTCCTCCGCGGGCTCTGAGCAGAAGGGTCGCATTCT...CCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp ACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCGTGCGCACCCGCGGCTaGCCTGGACGTCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: TSTASARIPVPPRGRFGSVRTRG*PGRLFA
Trigger: GGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCAC...GGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp AGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCACGGCCTCCCTCCCCTTGTCCGACACGTTaGCGCTCTCCGAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SALGRFTSFTRLCSRPPSPCPTR*RSPSPW
Trigger: CCAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGG...GGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCTCATCCTCCGCTCCTTaGAGCGCCGGTTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVSSSAP*SAGSGT
Trigger: GGTTCCAGAACCGGCGCTCCAAGGAGCGGAGGATGA...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCACCTCGAGGCCGATTTaGATCCTATTTCGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LPPHGSWHRQRLCAPAAATSRPI*ILFRVP
Trigger: GGGGACACGAAATAGGATCCAAATCGGCCTCGAGGT...GGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp TTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCCCCACGGCTCCTaGCATCGCCAACGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FGEPQFCTSTASARIPVPPPHGS*HRQRLC
Trigger: GCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGG...TGGGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCGTAGAGCCCAGGGGATaGCTCCTGAAGACAATCGGC +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVVEPRG*LLKTIG
Trigger: GCCGATTGTCTTCAGGAGTCATCCCCTGGGCTCTAC...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp GCCTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGTTCAAGTCATTTTACTaGGCGGTCTGGCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: ASLPTAPGIANGCAHPRLFKSFY*AVWLET
Trigger: GGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGAA...CAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGCGTCTCAGTGAAGTGTaGAGCCGGGGAGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VCVSFGEPQFCTSTASARRLSEV*SRGVPG
Trigger: CCCCGGGACTCCCCGGCTGCACACTTCACTGAGACG...CCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCACGGCCTCCCTCCCCAGGATGGGCCTTTTaGAGCCGGCACAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: SALGRFTSFTRLCSRPPSPGWAF*SRHSEP
Trigger: TGGTTCACTGTGCCGGCTGCAAAAGGCCCATCCTGG...GGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTCGCCAGTGGAGAGCTaGTTGTTACACATCATGCAG +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRSPVES*LLHIMQ
Trigger: CTGCATGATGTGTAACAAGCAGCTCTCCACTGGCGA...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACACGTCGACAGCCAGTaGGCGGATCCCAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: FGEPQFCTSTASARIPVPHVDSQ*ADPSPT
Trigger: GGTGGGACTGGGATCCGCGCACTGGCTGTCGACGTG...TGGGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp TTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACGCTCTCCGAGTCCTTaGCGTCGTCCTGCGACGGGT +
Preference number: 4 (lower is better)
Translates to: FGEPQFCTSTASARIPVPRSPSP*RRPATG
Trigger: ACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCG...TGGGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGGGCGAGTCCCCGGGTaGGTGCGCCAGGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCGRVPG*VRQDVG
Trigger: ACCGACATCCTGGCGCACCCACCCGGGGACTCGCCC...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp ATCCGGTCTCCCCAGAAGGAGAATGGTTCTCGAGGCTGGAGGAAGGGGGTGGGGACGAGAAGGGCGGGCTaGGTCCGAAGACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: IRSPQKENGSRGWRKGVGTRRAG*VRRPRP
Trigger: CGGCCGAGGTCTTCGGACCCAGCCCGCCCTTCTCGT...CCCCACCCCCTTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGAGACCGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTCACCCGCGGCTGCCCTaGACGTCTTTTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASHPRLP*TSFRRP
Trigger: CGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGGTG...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp AGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGCCCGGGAGCGCCCTaGGCCGCTTCACTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RSAFPLGSPSSARRQPVRGPGAP*AASLPS
Trigger: TGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCC...GCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGACTTTCTCAGGTTGCTaGTGCCAGGCACCTTTACAG +
Preference number: 4 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRTFSGC*CQAPLQ
Trigger: CTGTAAAGGTGCCTGGCACCAGCAACCTGAGAAAGT...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp TGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCCCAGGGGATGACTCCTaGAGACAATCGGCACGAGCT +
Preference number: 4 (lower is better)
Translates to: WGAPVLHVDSQCADPSPTPGDDS*RQSARA
Trigger: AGCTCGTGCCGATTGTCTTCAGGAGTCATCCCCTGG...GGTGGGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CTGGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTTTGCAGCCGGCACAGTaGACCATGGTCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LAGPGAPWAASLPSPGCALQPAQ*TMVFGL
Trigger: CAAACCAAAGACCATGGTTCACTGTGCCGGCTGCAA...AGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp TTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCCAAGCACTGGACGCACTTaGCGTGCCAGGCCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FGEPQFCTSTASARIPVPSTGRT*RARPCP
Trigger: TGGACAGGGCCTGGCACGTCAAGTGCGTCCAGTGCT...TGGGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCTCAGGTGAAACACTTTaGTCCGCGCTCTCCGCACCA +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVSGETL*SALSAP
Trigger: TGGTGCGGAGAGCGCGGAGCAAAGTGTTTCACCTGA...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTCGGTGCGCACCCGCGGCTaGCCTGGACGTCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: QPVRGSQSHLEADLDPISVRTRG*PGRLFA
Trigger: GGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCAC...CGAAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGACAACACTTTCTCAGGTTaGTGGTGCCAGGCACCTTTA +
Preference number: 4 (lower is better)
Translates to: PHGSWHRQRLCAPAAALDNTFSG*WCQAPL
Trigger: TAAAGGTGCCTGGCACCAGCAACCTGAGAAAGTGTT...GTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGCCATGGTCTTTGGTTTaGTCTGATGAGGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RLPGAHARGVCLRIRVQVPWSLV*SDEAQR
Trigger: TCTCTGGGCCTCATCAGACCAAACCAAAGACCATGG...CACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCATCCCCAGAAGGAGAATaGTTCTCGAGGCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GWPGSALGRFTSFTRLCSSPEGE*FSRLEE
Trigger: TTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGA...TGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTCCTCCCCACGGCTCCTaGCATCGCCAACGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASPPHGS*HRQRLC
Trigger: GCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGG...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCCGAGGAAAGCGCCGCTaGGTTCTCCGGGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCRGKRR*VLRGLR
Trigger: CCTCAAGCCCCGGAGAACTCAGCGGCGCTTTCCTCG...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCAGCTCGCCCCACCGTTaGCCGACAGCGACGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCSSPHR*PTATRR
Trigger: CCTTCTCGTCGCTGTCGGTCAACGGTGGGGCGAGCT...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGAAGTCAAAGTGCATCTaGTTTTGTCGGGGTATGAGG +
Preference number: 4 (lower is better)
Translates to: LPTAPGIANGCAHPRLPWKSKCI*FCRGMR
Trigger: CCTCATACCCCGACAAAAGCAGATGCACTTTGACTT...CCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGTCTTGCAGTAGAGTTTaGCTTCCCTGGAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: RLPGAHARGVCLRIRVQVSCSRV*LPWRST
Trigger: AGTGCTTCTCCAGGGAAGGCAAACTCTACTGCAAGA...CACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGTCCTTGGCGTCGTCCTaGGACGGGTCTTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: VCVSFGEPQFCTSTASARSLASS*DGSWES
Trigger: GGATTCCCAAGACCCGTCGCAGGACGACGCCAAGGA...CCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp ATCCGGTCTCCCCAGAAGGAGAATGGTTCTCGAGGCTGGAGGAAGGGGGTGGGGATGTCGGTAAACCGCTaGGCCTCGCTCGACGGGTGG +
Preference number: 4 (lower is better)
Translates to: IRSPQKENGSRGWRKGVGMSVNR*ASLDGW
Trigger: CCACCCGTCGAGCGAGGCGCAGCGGTTTACCGACAT...CCCCACCCCCTTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGAGACCGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCATTACATTCACAGCACTaGACGCACTTGACGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GWPGSALGRFTSFTRLCSLHSQH*THLTCQ
Trigger: CTGGCACGTCAAGTGCGTCCAGTGCTGTGAATGTAA...TGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTCGCGCTCTCCGAGTCCTTaGCGTCGTCCTGCGACGGGT +
Preference number: 4 (lower is better)
Translates to: QPVRGSQSHLEADLDPISRSPSP*RRPATG
Trigger: ACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCG...CGAAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCAGCTGGAGGAAGGGGGTaGGGACTTGCTTTTTATGTT +
Preference number: 4 (lower is better)
Translates to: GWPGSALGRFTSFTRLCSAGGRG*GLAFYV
Trigger: AACATAAAAAGCAAGTCCCCACCCCCTTCCTCCAGC...TGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGACTGGTCTAATATGCACTaGAGGTCACACAAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: PHGSWHRQRLCAPAAALDWSNMH*RSHKLR
Trigger: CCTAAGCTTGTGTGACCTCCAGTGCATATTAGACCA...GTCCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCCTTTGGATCCTAAACTaGCGGCATCGCGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: RSAFPLGSPSSARRQPVRLWILN*RHRAAG
Trigger: ACCCGCGGCGCGATGCCGGCAGTTTAGGATCCAAAG...GCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTCGGTGTGCGTGCCAGGCTaGCCACCACTGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: QPVRGSQSHLEADLDPISVCVPG*PPLGFP
Trigger: GGGAAATCCCAGTGGTGGGCAGCCTGGCACGCACAC...CGAAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCAGAATGCGACCCTTCTaGTCAGAGCCCGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSAFPLGSPSSARRQPVRRMRPF*SEPAEE
Trigger: CTCCTCCGCGGGCTCTGAGCAGAAGGGTCGCATTCT...GCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCACTTCTCGGTCAGGTTaGATTTACATTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: LPPHGSWHRQRLCAPAAATSRSG*IYIHST
Trigger: AGTGCTGTGAATGTAAATGCAACCTGACCGAGAAGT...GGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTGGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTGGAAGAAGTCGTTCTTaGAGTAGAGTTTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LAGPGAPWAASLPSPGCAGRSRS*SRVCLP
Trigger: GGGAAGGCAAACTCTACTGCAAGAACGACTTCTTCC...AGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGAGTCCCCGGGTGGGTaGGCCAGGATGTCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCESPGG*ARMSVN
Trigger: GTTTACCGACATCCTGGCGCACCCACCCGGGGACTC...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGGGAGCAGAGAAGCTTTaGATCCTAAACTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: HARGVCLRIRVQVGVGERGAEKL*ILNCRH
Trigger: ATGCCGGCAGTTTAGGATCCAAAGCTTCTCTGCTCC...CCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCCCATGGTCTTTGGTTTaGTCTGATGAGGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVPWSLV*SDEAQR
Trigger: TCTCTGGGCCTCATCAGACCAAACCAAAGACCATGG...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp ACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCGAGTTCTCCGGGGCTTaGGGTAGAGCTGTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: TSTASARIPVPPRGRFGSEFSGA*GRAVRS
Trigger: ACTTCTGACAGCTCTACCTCAAGCCCCGGAGAACTC...GGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCTTGCAGTAGAGTTTaGCTTCCCTGGAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: HARGVCLRIRVQVGVGERSCSRV*LPWRST
Trigger: AGTGCTTCTCCAGGGAAGGCAAACTCTACTGCAAGA...CCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp ATCCGGTCTCCCCAGAAGGAGAATGGTTCTCGAGGCTGGAGGAAGGGGGTGGGGGCCCTGAGCGCAGCCTaGGCATTTGGTACCGAAACA +
Preference number: 4 (lower is better)
Translates to: IRSPQKENGSRGWRKGVGALSAA*AFGTET
Trigger: TGTTTCGGTACCAAATGCGCAGGCTGCGCTCAGGGC...CCCCACCCCCTTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGAGACCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCTCTCTTTGGCAACACTaGTGTTACTTAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: LPPHGSWHRQRLCAPAAASLWQH*CYLGNP
Trigger: AGGATTACCTAAGTAACAGCAGTGTTGCCAAAGAGA...GGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCACGGCCTCCCTCCGTGAGCCGAAAGCCCTaGAAATCTGTCAGAACATCT +
Preference number: 4 (lower is better)
Translates to: SALGRFTSFTRLCSRPPSVSRKP*KSVRTS
Trigger: AGATGTTCTGACAGATTTGCAGGGCTTTCGGCTCAC...GGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGAACACTTTCTCAGGTTaGTGGTGCCAGGCACCTTTA +
Preference number: 4 (lower is better)
Translates to: HARGVCLRIRVQVGVGERNTFSG*WCQAPL
Trigger: TAAAGGTGCCTGGCACCAGCAACCTGAGAAAGTGTT...CCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTCCTTGTCCGACACGTTaGCGCTCTCCGAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASPCPTR*RSPSPW
Trigger: CCAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGG...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCTCATCCTCCGCTCCTTaGAGCGCCGGTTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCSSSAP*SAGSGT
Trigger: GGTTCCAGAACCGGCGCTCCAAGGAGCGGAGGATGA...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp ATCCGGTCTCCCCAGAAGGAGAATGGTTCTCGAGGCTGGAGGAAGGGGGTGGGGAATGGTTCTCGAGGCTaGAGGAAGGGGGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: IRSPQKENGSRGWRKGVGNGSRG*RKGVGT
Trigger: AGTCCCCACCCCCTTCCTCCAGCCTCGAGAACCATT...CCCCACCCCCTTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGAGACCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp ACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCACTGAGCGGTCTGGCTaGAGACCATCTTACCGAGTG +
Preference number: 4 (lower is better)
Translates to: TSTASARIPVPPRGRFGSTERSG*RPSYRV
Trigger: CACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGT...GGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp AGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCATATATAGTCCCACCTaGTGCACGGCAGGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: RSAFPLGSPSSARRQPVRIYSPT*CTAGRR
Trigger: ACGCCGACCTGCCGTGCATCAGGTGGGACTATATAT...GCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGGAAGAAGTCGTAGTTaGCCCCGGGCCCGTAGTACT +
Preference number: 4 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCGRSRS*PRARST
Trigger: AGTACTACGGGCCCGGGGGCAACTACGACTTCTTCC...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCTTACATTCACAGCACTaGACGCACTTGACGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PLGSPSSARRQPVRGSQSLHSQH*THLTCQ
Trigger: CTGGCACGTCAAGTGCGTCCAGTGCTGTGAATGTAA...GGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTCGGGTCTGCGTTTCCTTTaGGGAGCCCCAGTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: QPVRGSQSHLEADLDPISGLRFL*GAPVLH
Trigger: GTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACC...CGAAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp ATCCGGTCTCCCCAGAAGGAGAATGGTTCTCGAGGCTGGAGGAAGGGGGTGGGGACTGAGCGGTCTGGCTaGAGACCATCTTACCGAGTG +
Preference number: 4 (lower is better)
Translates to: IRSPQKENGSRGWRKGVGTERSG*RPSYRV
Trigger: CACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGT...CCCCACCCCCTTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGAGACCGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCTGGTCTAATATGCACTaGAGGTCACACAAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: RPRGLSTDPGPGGSWGEVWSNMH*RSHKLR
Trigger: CCTAAGCTTGTGTGACCTCCAGTGCATATTAGACCA...GACCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR CAA 72 bp CCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTaGGATCCTATTTCGTGTCCCCCTTTTCCATCCGGT +
Preference number: 4 (lower is better)
Translates to: PVRGSQSHLEAD*DPISCPPFPSG
Trigger: ACCGGATGGAAAAGGGGGACACGAAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTACACACACTCGGCCGTaGAAGCCAAAACTCGCACCA +
Preference number: 4 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASTHTRP*KPKLAP
Trigger: TGGTGCGAGTTTTGGCTTGCACGGCCGAGTGTGTGT...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCGTAGCAGCTGTTGACTaGATATTTGACCATAAAATT +
Preference number: 4 (lower is better)
Translates to: LPPHGSWHRQRLCAPAAAVAAVD*IFDHKI
Trigger: AATTTTATGGTCAAATATGCAGTCAACAGCTGCTAC...GGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GTTCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCGCGGTCCCCGCCGCTTaGCGCCCAGGTTCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: VQVILLSGLAGDHLTECVAVPAA*RPGSGR
Trigger: ACGACCAGAACCTGGGCGCCAAGCGGCGGGGACCGC...GACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp ACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCACTTTCTCAGGTTGCTaGTGCCAGGCACCTTTACAG +
Preference number: 4 (lower is better)
Translates to: TSTASARIPVPPRGRFGSTFSGC*CQAPLQ
Trigger: CTGTAAAGGTGCCTGGCACCAGCAACCTGAGAAAGT...GGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCATTAGGTAATCCTCTTTaGAGACGAACTTATTCTCGT +
Preference number: 4 (lower is better)
Translates to: GWPGSALGRFTSFTRLCSLGNPL*RRTYSR
Trigger: ACGAGAATAAGTTCGTCTGCAAAGAGGATTACCTAA...TGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTGGTCGTCATTCTCGTTaGTACCCGCTTCCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: DSQCADPSPTSRPIWILFGRHSR*YPLPCP
Trigger: CGGACAAGGAAGCGGGTAGCAACGAGAATGACGACC...AAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTGTTCCTTCACCCGGCTGTaGTCACGGCCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SHFTERSGWRPSYRVCPCSFTRL*SRPPSP
Trigger: TGGGGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGA...ACACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGTTCTCAGGTTGCTGGTaGCAGGCACCTTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: VCVSFGEPQFCTSTASARFSGCW*QAPLQY
Trigger: ATACTGTAAAGGTGCCTGGCACCAGCAACCTGAGAA...CCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTTCCTGCGACGGGTCTTaGGAATCCGGAGACAAACTG +
Preference number: 4 (lower is better)
Translates to: DSQCADPSPTSRPIWILFSCDGS*ESGDKL
Trigger: CAGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGA...AAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTTTGGCGCCCAGGTTCTaGTCGTCATTCTCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASLAPRF*SSFSLL
Trigger: TAGCAACGAGAATGACGACCAGAACCTGGGCGCCAA...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GTTCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCACGAGAAGGGCGGGCTaGGTCCGAAGACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: VQVILLSGLAGDHLTECVTRRAG*VRRPRP
Trigger: CGGCCGAGGTCTTCGGACCCAGCCCGCCCTTCTCGT...GACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp ATCCGGTCTCCCCAGAAGGAGAATGGTTCTCGAGGCTGGAGGAAGGGGGTGGGGTACATACTAGCACAGTaGGCCGAAAGCCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: IRSPQKENGSRGWRKGVGYILAQ*AESPAN
Trigger: ATTTGCAGGGCTTTCGGCTCACTGTGCTAGTATGTA...CCCCACCCCCTTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGAGACCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp ACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCAAGTCAAAGTGCATCTaGTTTTGTCGGGGTATGAGG +
Preference number: 4 (lower is better)
Translates to: TSTASARIPVPPRGRFGSKSKCI*FCRGMR
Trigger: CCTCATACCCCGACAAAAGCAGATGCACTTTGACTT...GGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGGAGTCCCCGGGTGGGTaGGCCAGGATGTCGGTAAAC +
Preference number: 4 (lower is better)
Translates to: SSHFTERSGWRPSYRVCPESPGG*ARMSVN
Trigger: GTTTACCGACATCCTGGCGCACCCACCCGGGGACTC...CGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp ATCCGGTCTCCCCAGAAGGAGAATGGTTCTCGAGGCTGGAGGAAGGGGGTGGGGGTGAGCCGAAAGCCCTaGAAATCTGTCAGAACATCT +
Preference number: 4 (lower is better)
Translates to: IRSPQKENGSRGWRKGVGVSRKP*KSVRTS
Trigger: AGATGTTCTGACAGATTTGCAGGGCTTTCGGCTCAC...CCCCACCCCCTTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGAGACCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGGTGAATGGTCTAATATaGACTGGAGGTCACACAAGC +
Preference number: 4 (lower is better)
Translates to: VCVSFGEPQFCTSTASARVNGLI*TGGHTS
Trigger: GCTTGTGTGACCTCCAGTGCATATTAGACCATTCAC...CCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp AGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCCGGCACAGTGAACCATaGTCTTTGGTTTGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: RSAFPLGSPSSARRQPVRRHSEP*SLVWSD
Trigger: ATCAGACCAAACCAAAGACCATGGTTCACTGTGCCG...GCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTCGGCTGGAGGAAGGGGGTaGGGACTTGCTTTTTATGTT +
Preference number: 4 (lower is better)
Translates to: QPVRGSQSHLEADLDPISAGGRG*GLAFYV
Trigger: AACATAAAAAGCAAGTCCCCACCCCCTTCCTCCAGC...CGAAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp GTTCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCAGCACTGGACGCACTTaGCGTGCCAGGCCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VQVILLSGLAGDHLTECVSTGRT*RARPCP
Trigger: TGGACAGGGCCTGGCACGTCAAGTGCGTCCAGTGCT...GACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTTACATACTAGCACAGTaGGCCGAAAGCCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASYILAQ*AESPAN
Trigger: ATTTGCAGGGCTTTCGGCTCACTGTGCTAGTATGTA...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTTTCTCAGGTTGCTGGTaGCAGGCACCTTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASFSGCW*QAPLQY
Trigger: ATACTGTAAAGGTGCCTGGCACCAGCAACCTGAGAA...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp TCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGGTAGAGCCCAGGGGATaGCTCCTGAAGACAATCGGC +
Preference number: 4 (lower is better)
Translates to: SSHFTERSGWRPSYRVCPVEPRG*LLKTIG
Trigger: GCCGATTGTCTTCAGGAGTCATCCCCTGGGCTCTAC...CGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp AGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGCTGTTGTTGAACTCTaGGACAACACTAATAAGGGA +
Preference number: 4 (lower is better)
Translates to: RSAFPLGSPSSARRQPVRAVVEL*DNTNKG
Trigger: TCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGC...GCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGTTTTCGCCGCCCGCCTaGCAGGCGCACACGCCCGCG +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEFSPPA*QAHTPA
Trigger: CGCGGGCGTGTGCGCCTGGCAGGCGGGCGGCGAAAA...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGTCGCTCGACGGGTGGTaGCCCGGCAGCGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPESLDGW*PGSGCS
Trigger: GGAGCACCCGCTGCCGGGCCACCACCCGTCGAGCGA...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGAAGGGACCATTGGGGATaGGCTCGCCCGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRRDHWG*ARPAPG
Trigger: GCCTGGAGCCGGGCGAGCTCATCCCCAATGGTCCCT...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCACTTCTCGGTCAGGTTaGATTTACATTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCTSRSG*IYIHST
Trigger: AGTGCTGTGAATGTAAATGCAACCTGACCGAGAAGT...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GTTCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCACAAACTGGGGTCACTaGCCGTGGTGGCCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: VQVILLSGLAGDHLTECVTNWGH*PWWPSE
Trigger: TTCACTCGGCCACCACGGGCAGTGACCCCAGTTTGT...GACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCATCGCCAACGGCTGTaGGCACCCGCGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEHRQRL*APAAAL
Trigger: CAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATG...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCACCCGCGGCTGCCCTaGACGTCTTTTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEHPRLP*TSFRRP
Trigger: CGGGCGGCGAAAAGACGTCCAGGGCAGCCGCGGGTG...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGAGGCCCGGGAGCGCCCTaGGCCGCTTCACTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRGPGAP*AASLPS
Trigger: TGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCC...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp CAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTTTCTGGAACCAGACCTaGATGACGCGCATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QVILLSGLAGDHLTECVRFWNQT*MTRMLR
Trigger: CCTCAACATGCGCGTCATTCAGGTCTGGTTCCAGAA...ACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGAGGGACCATTGGGGATaGGCTCGCCCGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPERDHWG*ARPAPG
Trigger: GCCTGGAGCCGGGCGAGCTCATCCCCAATGGTCCCT...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR TCA 90 bp GACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTGCTGTTGTTGAACTCTaGGACAACACTAATAAGGGA +
Preference number: 4 (lower is better)
Translates to: DSQCADPSPTSRPIWILFAVVEL*DNTNKG
Trigger: TCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGC...AAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTCGTCTCTTTGGCAACACTaGTGTTACTTAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: QPVRGSQSHLEADLDPISSLWQH*CYLGNP
Trigger: AGGATTACCTAAGTAACAGCAGTGTTGCCAAAGAGA...CGAAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGAGGGGAGCCCCAGTTCTaGACGTCGACAGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRGEPQF*TSTASA
Trigger: CGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCC...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGGTGCGCACCCGCGGCTaGCCTGGACGTCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEVRTRG*PGRLFA
Trigger: GGCGAAAAGACGTCCAGGGCAGCCGCGGGTGCGCAC...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR GCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGATCCTTCACCCGGCTGTaGTCACGGCCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRSFTRL*SRPPSP
Trigger: TGGGGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGA...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCCTCCCCACGGCTCCTaGCATCGCCAACGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEPPHGS*HRQRLC
Trigger: GCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGG...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGGGCCCGGGAGCGCCCTaGGCCGCTTCACTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEGPGAP*AASLPS
Trigger: TGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCC...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGGAGCTAGAACCCTCCTaGCTGGCCCGGGAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEELEPS*LARERP
Trigger: AGGGCGCTCCCGGGCCAGCCAGGAGGGTTCTAGCTC...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR TCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCGAGGAAAGCGCCGCTaGGTTCTCCGGGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPERGKRR*VLRGLR
Trigger: CCTCAAGCCCCGGAGAACTCAGCGGCGCTTTCCTCG...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCACGTCGACAGCCAGTaGGCGGATCCCAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEHVDSQ*ADPSPT
Trigger: GGTGGGACTGGGATCCGCGCACTGGCTGTCGACGTG...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR GCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGGGGGAGCCCCAGTTCTaGACGTCGACAGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEGEPQF*TSTASA
Trigger: CGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCC...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR GCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGTCCTTCACCCGGCTGTaGTCACGGCCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPESFTRL*SRPPSP
Trigger: TGGGGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGA...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CCA 90 bp TCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGGGAGCAGAGAAGCTTTaGATCCTAAACTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SSHFTERSGWRPSYRVCPGAEKL*ILNCRH
Trigger: ATGCCGGCAGTTTAGGATCCAAAGCTTCTCTGCTCC...CGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTGTGAACCATGGTCTTTaGTTTGGTCTGATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QVILLSGLAGDHLTECVRVNHGL*FGLMRP
Trigger: GGGCCTCATCAGACCAAACCAAAGACCATGGTTCAC...ACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGGGAAGAAGTCGTTCTTaGAGTAGAGTTTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSHFTERSGWRPSYRVCPGRSRS*SRVCLP
Trigger: GGGAAGGCAAACTCTACTGCAAGAACGACTTCTTCC...CGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GTTCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCTCGCCAGTGGAGAGCTaGTTGTTACACATCATGCAG +
Preference number: 4 (lower is better)
Translates to: VQVILLSGLAGDHLTECVSPVES*LLHIMQ
Trigger: CTGCATGATGTGTAACAAGCAGCTCTCCACTGGCGA...GACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCATGTCGGTAAACCGCTaGGCCTCGCTCGACGGGTGG +
Preference number: 4 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSMSVNR*ASLDGW
Trigger: CCACCCGTCGAGCGAGGCGCAGCGGTTTACCGACAT...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTCGGCACAGTGAACCATaGTCTTTGGTTTGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: QVILLSGLAGDHLTECVRRHSEP*SLVWSD
Trigger: ATCAGACCAAACCAAAGACCATGGTTCACTGTGCCG...ACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGAGAAAGCGGTCCAGGATaGGCCTTTTGCAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRESGPG*AFCSRH
Trigger: GTGCCGGCTGCAAAAGGCCCATCCTGGACCGCTTTC...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCTGGGGTCACTGCCCGTaGTGGCCGAGTGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSWGHCP*WPSEGC
Trigger: ACAGCCTTCACTCGGCCACCACGGGCAGTGACCCCA...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCTTTGGATCCTAAACTaGCGGCATCGCGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSLWILN*RHRAAG
Trigger: ACCCGCGGCGCGATGCCGGCAGTTTAGGATCCAAAG...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp CTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCTAGAACCCACACACACTCGGCCGTaGAAGCCAAAACTCGCACCA +
Preference number: 4 (lower is better)
Translates to: LLLNSETTLIRDIPELEPTHTRP*KPKLAP
Trigger: TGGTGCGAGTTTTGGCTTGCACGGCCGAGTGTGTGT...GGGTTCTAGCTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGACCAGGATGGGCCTTTTaGAGCCGGCACAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRPGWAF*SRHSEP
Trigger: TGGTTCACTGTGCCGGCTGCAAAAGGCCCATCCTGG...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGAGCCCTGAGCGCAGCCTaGGCATTTGGTACCGAAACA +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRALSAA*AFGTET
Trigger: TGTTTCGGTACCAAATGCGCAGGCTGCGCTCAGGGC...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCTCCTTGGCGTCGTCCTaGGACGGGTCTTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSSLASS*DGSWES
Trigger: GGATTCCCAAGACCCGTCGCAGGACGACGCCAAGGA...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCCAGGGGATGACTCCTaGAGACAATCGGCACGAGCT +
Preference number: 4 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSPGDDS*RQSARA
Trigger: AGCTCGTGCCGATTGTCTTCAGGAGTCATCCCCTGG...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGATCAGGTGAAACACTTTaGTCCGCGCTCTCCGCACCA +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRSGETL*SALSAP
Trigger: TGGTGCGGAGAGCGCGGAGCAAAGTGTTTCACCTGA...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGAGGTCGTCATTCTCGTTaGTACCCGCTTCCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRGRHSR*YPLPCP
Trigger: CGGACAAGGAAGCGGGTAGCAACGAGAATGACGACC...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCAATGGTTCTCGAGGCTaGAGGAAGGGGGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSNGSRG*RKGVGT
Trigger: AGTCCCCACCCCCTTCCTCCAGCCTCGAGAACCATT...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp CTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCTAGAACCCTCCCCAGAAGGAGAATaGTTCTCGAGGCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LLLNSETTLIRDIPELEPSPEGE*FSRLEE
Trigger: TTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGA...GGGTTCTAGCTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGGGTCTGCGTTTCCTTTaGGGAGCCCCAGTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEGLRFL*GAPVLH
Trigger: GTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACC...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR TCA 90 bp CTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCTAGAACCCTTCAAGTCATTTTACTaGGCGGTCTGGCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: LLLNSETTLIRDIPELEPFKSFY*AVWLET
Trigger: GGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGAA...GGGTTCTAGCTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGTTGCAGCCGGCACAGTaGACCATGGTCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPELQPAQ*TMVFGL
Trigger: CAAACCAAAGACCATGGTTCACTGTGCCGGCTGCAA...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp GTTTTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCTTGGCGCCCAGGTTCTaGTCGTCATTCTCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: VFSLPRVNNTFLHTSTVSLAPRF*SSFSLL
Trigger: TAGCAACGAGAATGACGACCAGAACCTGGGCGCCAA...GCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGACCTCGAGGCCGATTTaGATCCTATTTCGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPETSRPI*ILFRVP
Trigger: GGGGACACGAAATAGGATCCAAATCGGCCTCGAGGT...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGTCCCCAGAAGGAGAATaGTTCTCGAGGCTCCGTAGA +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPESPEGE*FSRLRR
Trigger: TCTACGGAGCCTCGAGAACCATTCTCCTTCTGGGGA...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621767.1
ENST00000633397.1
CDS-3UTR GCA 90 bp AGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTGTGTAGCAGCTGTTGACTaGATATTTGACCATAAAATT +
Preference number: 4 (lower is better)
Translates to: SHFTERSGWRPSYRVCPCVAAVD*IFDHKI
Trigger: AATTTTATGGTCAAATATGCAGTCAACAGCTGCTAC...ACACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR GCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGAGTGAATGGTCTAATATaGACTGGAGGTCACACAAGC +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRVNGLI*TGGHTS
Trigger: GCTTGTGTGACCTCCAGTGCATATTAGACCATTCAC...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR TCA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGGCTGTTGTTGAACTCTaGGACAACACTAATAAGGGA +
Preference number: 4 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEAVVEL*DNTNKG
Trigger: TCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGC...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR GCA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGATTAGGTAATCCTCTTTaGAGACGAACTTATTCTCGT +
Preference number: 4 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRLGNPL*RRTYSR
Trigger: ACGAGAATAAGTTCGTCTGCAAAGAGGATTACCTAA...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
3UTR CAA 72 bp TATGTGTGTATGTGTAGTTTTGCGAAGGTAGAAGAGTaGATACGGAGGGCTTTACATTTAGAATTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: YVCMCSFAKVEE*IRRALHLEFCN
Trigger: ATTGCAAAATTCTAAATGTAAAGCCCTCCGTATCAACTCTTCTACCTTCGCAAAACTACACATACACACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS GCA 90 bp GTAAACCGCTGCGCCTCGCTCGACGGGTGGTGGCCCGGCAGCGGGTaGTCCAGGCCACCCAGGGGCGTCCCGGACGGCCCAGATGACGGC +
Preference number: 5 (lower is better)
Translates to: VNRCASLDGWWPGSG*SRPPRGVPDGPDDG
Trigger: GCCGTCATCTGGGCCGTCCGGGACGCCCCTGGGTGGCCTGGAGCACCCGCTGCCGGGCCACCACCCGTCGAGCGAGGCGCAGCGGTTTAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS CCA 90 bp GCGCCTGGCCGTGCATCGTGGCTCCAGTCACAACTCGCGGCCGCCTaGGCGCACAGCCCCGCATCGCTCGGCCCACGCTCTGTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: APGRASWLQSQLAAA*AHSPASLGPRSVCL
Trigger: GAGGCAGACAGAGCGTGGGCCGAGCGATGCGGGGCTGTGCGCCCAGGCGGCCGCGAGTTGTGACTGGAGCCACGATGCACGGCCAGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619297.1
ENST00000634033.1
CDS-3UTR CAA 90 bp CACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGGCGCTCTCCGAGTCCTaGGCGTCGTCCTGCGACGGG +
Preference number: 5 (lower is better)
Translates to: HARGVCLRIRVQVGVGERALSES*ASSCDG
Trigger: CCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCGC...CCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCCGCGGTCCCCGCCGCTaGGCGCCCAGGTTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PLGSPSSARRQPVRGSQSRGPRR*APRFWS
Trigger: CGACCAGAACCTGGGCGCCAAGCGGCGGGGACCGCG...GGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS CCA 90 bp CTCTCTGGATTCTGGGCTCTCCTGGCTCGGCCTGGGTGCCCAAAGTaGCAGTGTGGGCCTCTGTGGGATGGAGAGGCGCGCCGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LSGFWALLARPGCPK*QCGPLWDGEARRGL
Trigger: CAGGCCCCGGCGCGCCTCTCCATCCCACAGAGGCCCACACTGCCACTTTGGGCACCCAGGCCGAGCCAGGAGAGCCCAGAATCCAGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1
CDS-3UTR CAA 90 bp CGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGTTGCTACCCGCTTCCTaGTCCGACACGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: RLPGAHARGVCLRIRVQVLLPAS*SDTLAL
Trigger: GAGCGCCAACGTGTCGGACAAGGAAGCGGGTAGCAA...CACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTACGCGGTCCCCGCCGCTaGGCGCCCAGGTTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: VDSQCADPSPTSRPIWILRGPRR*APRFWS
Trigger: CGACCAGAACCTGGGCGCCAAGCGGCGGGGACCGCG...TAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GGCTGGCCCGGGAGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCAAAGGAGAAGGGACCATaGGGGATGAGCTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: GWPGSALGRFTSFTRLCSKEKGP*GMSSPG
Trigger: GCCGGGCGAGCTCATCCCCAATGGTCCCTTCTCCTT...TGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCTCCCGGGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CCCGCCTGCCAGGCGCACACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGTCGTCATTCTCGTaGCTACCCGCTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PACQAHTPAGSVYGSGSRWSSFS*LPASLS
Trigger: GGACAAGGAAGCGGGTAGCAACGAGAATGACGACCA...CCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTGTGCGCCTGGCAGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCCTGGCACCTCGAGGCCGATTaGGATCCTATTTCGTGTCCC +
Preference number: 5 (lower is better)
Translates to: LPTAPGIANGCAHPRLPWHLEAD*DPISCP
Trigger: GGGACACGAAATAGGATCCAAATCGGCCTCGAGGTG...CCAGGGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTAGCGCTCTCCGAGTCCTaGGCGTCGTCCTGCGACGGG +
Preference number: 5 (lower is better)
Translates to: VDSQCADPSPTSRPIWILALSES*ASSCDG
Trigger: CCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCGC...TAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CACGCCCGCGGGGTCTGTCTACGGATCCGGGTCCAGGTGGGAGTTGGGGAGAGGTCCTTGTCCGACACGTaGGCGCTCTCCGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HARGVCLRIRVQVGVGERSLSDT*ALSESL
Trigger: CAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGGA...CCTCTCCCCAACTCCCACCTGGACCCGGATCCGTAGACAGACCCCGCGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS TCA 90 bp ACTCGCTCTGGTAATCTCCGTAGAAGGAGAAGGGACCATTGGGGATaGGCTCGCCCGGCTCCAGGCGGTCCACCAGCGGCCGCATCCGGC +
Preference number: 5 (lower is better)
Translates to: TRSGNLRRRRRDHWG*ARPAPGGPPAAASG
Trigger: GCCGGATGCGGCCGCTGGTGGACCGCCTGGAGCCGGGCGAGCTCATCCCCAATGGTCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS CCA 90 bp ACGTTGGCGCTCTCCGAGTCCTTGGCGTCGTCCTGCGACGGGTCTTaGGAATCCGGAGACAAACTGGGGTCACTGCCCGTGGTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: TLALSESLASSCDGS*ESGDKLGSLPVVAE
Trigger: CTCGGCCACCACGGGCAGTGACCCCAGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCGCCAACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS GCA 90 bp CTCTCACTTCTCTCTGGATTCTGGGCTCTCCTGGCTCGGCCTGGGTaGCCAAAGTGGCAGTGTGGGCCTCTGTGGGATGGAGAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: LSLLSGFWALLARPG*PKWQCGPLWDGEAR
Trigger: GCGCGCCTCTCCATCCCACAGAGGCCCACACTGCCACTTTGGGCACCCAGGCCGAGCCAGGAGAGCCCAGAATCCAGAGAGAAGTGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1
CDS GCA 90 bp CCTGAGCTCCCGGGGCGAGGAAAAGAAGTCTCAGGCGGGAGAGAATaGGACCCTTCTGCTCAGAGCCCGCGGAGGAGTGAAGGTCAGCGA +
Preference number: 5 (lower is better)
Translates to: PELPGRGKEVSGGRE*DPSAQSPRRSEGQR
Trigger: TCGCTGACCTTCACTCCTCCGCGGGCTCTGAGCAGAAGGGTCGCATTCTCTCCCGCCTGAGACTTCTTTTCCTCGCCCCGGGAGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614239.1
ENST00000619939.4
ENST00000620305.2
ENST00000631483.1
ENST00000673652.1
CDS GCA 90 bp CTTGGCTCCGGGAAAGACAGCAGTCCGGGCTACAACGCCCGAGGCTaGCCTGTCTCTTCCAAGCTTGAAGGGGCTTCTGGGCCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: LGSGKDSSPGYNARG*PVSSKLEGASGPSQ
Trigger: CTGACTCGGCCCAGAAGCCCCTTCAAGCTTGGAAGAGACAGGGCAGCCTCGGGCGTTGTAGCCCGGACTGCTGTCTTTCCCGGAGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS GCA 90 bp CCTGGGCTCTGCCTGGAGGGCAAACAACCCCGAAGGCCTGGAGAATaGAGTTGCTGCAGAGCTTGGCTCCGGGAAAGACAGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: PGLCLEGKQPRRPGE*SCCRAWLRERQQSG
Trigger: CCCGGACTGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCCCTCCAGGCAGAGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS-3UTR CAA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTCAGCACTGGACGCACTaGACGTGCCAGGCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASQHWTH*TCQALS
Trigger: GGACAGGGCCTGGCACGTCAAGTGCGTCCAGTGCTG...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCAGGTCTGCGTTTCCTTaGGGGAGCCCCAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PLGSPSSARRQPVRGSQSRSAFP*GSPSSA
Trigger: TGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT...GGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS CCA 90 bp CCTTGGCGTCGTCCTGCGACGGGTCTTGGGAATCCGGAGACAAACTaGGGTCACTGCCCGTGGTGGCCGAGTGAAGGCTGTTCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: PWRRPATGLGNPETN*GHCPWWPSEGCSLW
Trigger: CCAAAGAGAACAGCCTTCACTCGGCCACCACGGGCAGTGACCCCAGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGACGACGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS CCA 90 bp TGCTACCCGCTTCCTTGTCCGACACGTTGGCGCTCTCCGAGTCCTTaGCGTCGTCCTGCGACGGGTCCGAGTGAAGGCTGTTCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: CYPLPCPTRWRSPSP*RRPATGPSEGCSLW
Trigger: CCAAAGAGAACAGCCTTCACTCGGACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGGAAGCGGGTAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619939.4
ENST00000631483.1
CDS CCA 90 bp CCATCTCTCACTTCTCTCTGGATTCTGGGCTCTCCTGGCTCGGCCTaGGTGCCCAAAGTGGCAGTGTGGGCCTCTGTGGGATGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: PSLTSLWILGSPGSA*VPKVAVWASVGWRG
Trigger: GCCTCTCCATCCCACAGAGGCCCACACTGCCACTTTGGGCACCCAGGCCGAGCCAGGAGAGCCCAGAATCCAGAGAGAAGTGAGAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1
CDS CCA 90 bp GGCAAACAACCCCGAAGGCCTGGAGAATGCAGTTGCTGCAGAGCTTaGCTCCGGGAAAGACAGCAGTCCGGGCTACAACGCCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GKQPRRPGECSCCRA*LRERQQSGLQRPRL
Trigger: CAGCCTCGGGCGTTGTAGCCCGGACTGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS CCA 90 bp GAGGGAGCCTGGGCTCTGCCTGGAGGGCAAACAACCCCGAAGGCCTaGAGAATGCAGTTGCTGCAGAGCTTGGCTCCGGGAAAGACAGCA +
Preference number: 5 (lower is better)
Translates to: EGAWALPGGQTTPKA*RMQLLQSLAPGKTA
Trigger: TGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCCCTCCAGGCAGAGCCCAGGCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS-3UTR CAA 90 bp ATCCGGTCTCCCCAGAAGGAGAATGGTTCTCGAGGCTGGAGGAAGGGGGTGGGGTCCTTGTCCGACACGTaGGCGCTCTCCGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: IRSPQKENGSRGWRKGVGSLSDT*ALSESL
Trigger: CAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGGA...CCCCACCCCCTTCCTCCAGCCTCGAGAACCATTCTCCTTCTGGGGAGACCGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp AGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCTTGCTACCCGCTTCCTaGTCCGACACGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: RSAFPLGSPSSARRQPVRLLPAS*SDTLAL
Trigger: GAGCGCCAACGTGTCGGACAAGGAAGCGGGTAGCAA...GCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTATGTGGCGGGTGGGCTaGGGTGTAGCAGCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: DSQCADPSPTSRPIWILFMWRVG*GVAAKA
Trigger: CGCCTTCGCTGCTACACCCAAGCCCACCCGCCACAT...AAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp ACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCAGGTCTGCGTTTCCTTaGGGGAGCCCCAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TSTASARIPVPPRGRFGSRSAFP*GSPSSA
Trigger: TGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT...GGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS GCA 90 bp TGCCTGGAGGGCAAACAACCCCGAAGGCCTGGAGAATGCAGTTGCTaGAGAGCTTGGCTCCGGGAAAGACAGCAGTCCGGGCTACAACGC +
Preference number: 5 (lower is better)
Translates to: CLEGKQPRRPGECSC*RAWLRERQQSGLQR
Trigger: GCGTTGTAGCCCGGACTGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCCCTCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS-3UTR CAA 90 bp AGCGCCCTGGGCCGCTTCACTTCCTTCACCCGGCTGTGCTCACGGCCTCCCTCCCACTTCTCGGTCAGGTaGCATTTACATTCACAGCAC +
Preference number: 5 (lower is better)
Translates to: SALGRFTSFTRLCSRPPSHFSVR*HLHSQH
Trigger: GTGCTGTGAATGTAAATGCAACCTGACCGAGAAGTG...GGAGGGAGGCCGTGAGCACAGCCGGGTGAAGGAAGTGAAGCGGCCCAGGGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS GCA 90 bp GGCTTCTGGGCCGAGTCAGGCTCAGACCCTTTCTTCCCAGGCACATaGAGCCAAACCCAGACCCATAGTTTCCAGGATGCAAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GFWAESGSDPFFPGT*SQTQTHSFQDASRA
Trigger: GGCCCTGCTTGCATCCTGGAAACTATGGGTCTGGGTTTGGCTGCATGTGCCTGGGAAGAAAGGGTCTGAGCCTGACTCGGCCCAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS GCA 90 bp CTCTGCCTGGAGGGCAAACAACCCCGAAGGCCTGGAGAATGCAGTTaGTGCAGAGCTTGGCTCCGGGAAAGACAGCAGTCCGGGCTACAA +
Preference number: 5 (lower is better)
Translates to: LCLEGKQPRRPGECS*CRAWLRERQQSGLQ
Trigger: TTGTAGCCCGGACTGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCCCTCCAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS-3UTR CAA 90 bp ACGTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCAAAGTGCATCTGCTTTaGTCGGGGTATGAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: TSTASARIPVPPRGRFGSKVHLL*SGYEGD
Trigger: GTCGCCCTCATACCCCGACAAAAGCAGATGCACTTT...GGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTGCGCAGCCTGCGCATTaGGTACCGAAACACCGGAAG +
Preference number: 5 (lower is better)
Translates to: DSQCADPSPTSRPIWILFAQPAH*VPKHRK
Trigger: CTTCCGGTGTTTCGGTACCAAATGCGCAGGCTGCGC...AAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GTCGACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATGGTCGTCATTCTCGTaGCTACCCGCTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: VDSQCADPSPTSRPIWILWSSFS*LPASLS
Trigger: GGACAAGGAAGCGGGTAGCAACGAGAATGACGACCA...TAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CTCCCTCCCCACGGCTCCTGGCATCGCCAACGGCTGTGCGCACCCGCGGCTGCCAGCTATAAGAGTTTTTaGTCGCTGTTGTTGAACTCT +
Preference number: 5 (lower is better)
Translates to: LPPHGSWHRQRLCAPAAASYKSF*SLLLNS
Trigger: AGAGTTCAACAACAGCGACAAAAAACTCTTATAGCT...GGCAGCCGCGGGTGCGCACAGCCGTTGGCGATGCCAGGAGCCGTGGGGAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCCACCTCGAGGCCGATTaGGATCCTATTTCGTGTCCC +
Preference number: 5 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCHLEAD*DPISCP
Trigger: GGGACACGAAATAGGATCCAAATCGGCCTCGAGGTG...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS CCA 90 bp GAAAGCGGTCCAGGATGGGCCTTTTGCAGCCGGCACAGTGAACCATaGTCTTTGGTTTGGTCTGATGAGGCCCAGAGAGAGAGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: ESGPGWAFCSRHSEP*SLVWSDEAQRERGA
Trigger: TGCCCCTCTCTCTCTCTGGGCCTCATCAGACCAAACCAAAGACCATGGTTCACTGTGCCGGCTGCAAAAGGCCCATCCTGGACCGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614239.1
ENST00000619939.4
ENST00000620305.2
ENST00000631483.1
ENST00000673652.1
CDS-3UTR CAA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTAGGAGCAGAGAAGCTTaGGATCCTAAACTGCCGGCA +
Preference number: 5 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASRSREA*DPKLPA
Trigger: TGCCGGCAGTTTAGGATCCAAAGCTTCTCTGCTCCT...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTCAGCACTGGACGCACTaGACGTGCCAGGCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: QVILLSGLAGDHLTECVRQHWTH*TCQALS
Trigger: GGACAGGGCCTGGCACGTCAAGTGCGTCCAGTGCTG...ACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCCCAGTGGAGAGCTGCTaGTTACACATCATGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCPVESC*LHIMQV
Trigger: CACCTGCATGATGTGTAACAAGCAGCTCTCCACTGG...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GACAGCCAGTGCGCGGATCCCAGTCCCACCTCGAGGCCGATTTGGATCCTATTTAGGAGCAGAGAAGCTTaGGATCCTAAACTGCCGGCA +
Preference number: 5 (lower is better)
Translates to: DSQCADPSPTSRPIWILFRSREA*DPKLPA
Trigger: TGCCGGCAGTTTAGGATCCAAAGCTTCTCTGCTCCT...AAATAGGATCCAAATCGGCCTCGAGGTGGGACTGGGATCCGCGCACTGGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCAGTGAACCATGGTCTTaGGTTTGGTCTGATGAGGCC +
Preference number: 5 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCSEPWS*VWSDEA
Trigger: GGCCTCATCAGACCAAACCAAAGACCATGGTTCACT...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GTTCAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCATGTGGCGGGTGGGCTaGGGTGTAGCAGCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: VQVILLSGLAGDHLTECVMWRVG*GVAAKA
Trigger: CGCCTTCGCTGCTACACCCAAGCCCACCCGCCACAT...GACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTAAGGAGAAGGGACCATaGGGGATGAGCTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: QVILLSGLAGDHLTECVRKEKGP*GMSSPG
Trigger: GCCGGGCGAGCTCATCCCCAATGGTCCCTTCTCCTT...ACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS CCA 90 bp GTCCAGGATGGGCCTTTTGCAGCCGGCACAGTGAACCATGGTCTTTaGTTTGGTCTGATGAGGCCCAGAGAGAGAGAGGGGCAAAGTAGA +
Preference number: 5 (lower is better)
Translates to: VQDGPFAAGTVNHGL*FGLMRPREREGQSR
Trigger: TCTACTTTGCCCCTCTCTCTCTCTGGGCCTCATCAGACCAAACCAAAGACCATGGTTCACTGTGCCGGCTGCAAAAGGCCCATCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614239.1
ENST00000619939.4
ENST00000620305.2
ENST00000631483.1
ENST00000673652.1
CDS-3UTR CAA 90 bp CAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTTTCATCCTCCGCTCCTaGGAGCGCCGGTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: QVILLSGLAGDHLTECVRFILRS*ERRFWN
Trigger: GTTCCAGAACCGGCGCTCCAAGGAGCGGAGGATGAA...ACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GGAGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGAAGGTAGAAGAGTaGATACGGAGGGCTTTACAT +
Preference number: 5 (lower is better)
Translates to: GEVCVSFGEPQFCTSTASAKVEE*IRRALH
Trigger: ATGTAAAGCCCTCCGTATCAACTCTTCTACCTTCGC...ACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp GTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGTTTTTGTCGCTGTTGTaGAACTCTGAGACAACACTA +
Preference number: 5 (lower is better)
Translates to: VCVSFGEPQFCTSTASARFLSLL*NSETTL
Trigger: TAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA...CCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCGCGGATCCCAGTCCAGCTATAAGAGTTTTTaGTCGCTGTTGTTGAACTCT +
Preference number: 5 (lower is better)
Translates to: PLGSPSSARRQPVRGSQSSYKSF*SLLLNS
Trigger: AGAGTTCAACAACAGCGACAAAAAACTCTTATAGCT...GGACTGGGATCCGCGCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTAAAGTGCATCTGCTTTaGTCGGGGTATGAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: QVILLSGLAGDHLTECVRKVHLL*SGYEGD
Trigger: GTCGCCCTCATACCCCGACAAAAGCAGATGCACTTT...ACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp AGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTGTCCAGTGGAGAGCTGCTaGTTACACATCATGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SHFTERSGWRPSYRVCPCPVESC*LHIMQV
Trigger: CACCTGCATGATGTGTAACAAGCAGCTCTCCACTGG...ACACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp AGAGGTCTGCGTTTCCTTTGGGGAGCCCCAGTTCTGCACGTCGACAGCCAGTGCTTTTTGTCGCTGTTGTaGAACTCTGAGACAACACTA +
Preference number: 5 (lower is better)
Translates to: RGLRFLWGAPVLHVDSQCFLSLL*NSETTL
Trigger: TAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA...GCACTGGCTGTCGACGTGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp CTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCTAGAACCCGCGCAGCCTGCGCATTaGGTACCGAAACACCGGAAG +
Preference number: 5 (lower is better)
Translates to: LLLNSETTLIRDIPELEPAQPAH*VPKHRK
Trigger: CTTCCGGTGTTTCGGTACCAAATGCGCAGGCTGCGC...GGGTTCTAGCTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS GCA 90 bp CACTGCCCGTGGTGGCCGAGTGAAGGCTGTTCTCTTTGGCAACACTaGTGTTACTTAGGTAATCCTCTTTGCAGACGAACTTATTCTCGT +
Preference number: 5 (lower is better)
Translates to: HCPWWPSEGCSLWQH*CYLGNPLCRRTYSR
Trigger: ACGAGAATAAGTTCGTCTGCAAAGAGGATTACCTAAGTAACAGCAGTGTTGCCAAAGAGAACAGCCTTCACTCGGCCACCACGGGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS GCA 90 bp CGTCCTGCGACGGGTCCGAGTGAAGGCTGTTCTCTTTGGCAACACTaGTGTTACTTAGGTAATCCTCTTTGCAGACGAACTTATTCTCGT +
Preference number: 5 (lower is better)
Translates to: RPATGPSEGCSLWQH*CYLGNPLCRRTYSR
Trigger: ACGAGAATAAGTTCGTCTGCAAAGAGGATTACCTAAGTAACAGCAGTGTTGCCAAAGAGAACAGCCTTCACTCGGACCCGTCGCAGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619939.4
ENST00000631483.1
CDS CCA 90 bp CACCTCTCTTTGGAGGGGAAGTCCCTGATCTGGGGCTTGTCTAATTaGAGCAAGCGATCACAAAGTTGGAGTTGCAGACTTAGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: HLSLEGKSLIWGLSN*SKRSQSWSCRLRKS
Trigger: ACTCTTCCTAAGTCTGCAACTCCAACTTTGTGATCGCTTGCTCCAATTAGACAAGCCCCAGATCAGGGACTTCCCCTCCAAAGAGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1
CDS-3UTR CAA 90 bp CAAGTCATTTTACTGAGCGGTCTGGCTGGAGACCATCTTACCGAGTGTGTCCGTCACTTCTCGGTCAGGTaGCATTTACATTCACAGCAC +
Preference number: 5 (lower is better)
Translates to: QVILLSGLAGDHLTECVRHFSVR*HLHSQH
Trigger: GTGCTGTGAATGTAAATGCAACCTGACCGAGAAGTG...ACGGACACACTCGGTAAGATGGTCTCCAGCCAGACCGCTCAGTAAAATGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGAAGGAGAAGGGACCATaGGGGATGAGCTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEKEKGP*GMSSPG
Trigger: GCCGGGCGAGCTCATCCCCAATGGTCCCTTCTCCTT...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CAA 90 bp TTCTCTTTGCCTCGTGTAAACAACACCTTTTTACATACTAGCACAGTGAGCCGAGTCCTGCGACGGGTCTaGGGAATCCGGAGACAAACT +
Preference number: 5 (lower is better)
Translates to: FSLPRVNNTFLHTSTVSRVLRRV*GIRRQT
Trigger: AGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGAC...TCGGCTCACTGTGCTAGTATGTAAAAAGGTGTTGTTTACACGAGGCAAAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGTTCATCCTCCGCTCCTaGGAGCGCCGGTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEFILRS*ERRFWN
Trigger: GTTCCAGAACCGGCGCTCCAAGGAGCGGAGGATGAA...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS GCA 90 bp ATCTGGGGCTTGTCTAATTGGAGCAAGCGATCACAAAGTTGGAGTTaGAGACTTAGGAAGAGTTCACTTTGTGCAGAAGGCAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: IWGLSNWSKRSQSWS*RLRKSSLCAEGRGT
Trigger: AGTCCCTCTGCCTTCTGCACAAAGTGAACTCTTCCTAAGTCTGCAACTCCAACTTTGTGATCGCTTGCTCCAATTAGACAAGCCCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1
CDS-3UTR CAA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGGTCCTGCGACGGGTCTaGGGAATCCGGAGACAAACT +
Preference number: 5 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEVLRRV*GIRRQT
Trigger: AGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGAC...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS-3UTR CAA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGAGGTCTGCGTTTCCTTaGGGGAGCCCCAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: FLSLLLNSETTLIRDIPERSAFP*GSPSSA
Trigger: TGCAGAACTGGGGCTCCCCAAAGGAAACGCAGACCT...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CAA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGCACCTCGAGGCCGATTaGGATCCTATTTCGTGTCCC +
Preference number: 5 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEHLEAD*DPISCP
Trigger: GGGACACGAAATAGGATCCAAATCGGCCTCGAGGTG...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CAA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGTTTTTGTCGCTGTTGTaGAACTCTGAGACAACACTA +
Preference number: 5 (lower is better)
Translates to: FLSLLLNSETTLIRDIPEFLSLL*NSETTL
Trigger: TAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS-3UTR CAA 90 bp TTTTTGTCGCTGTTGTTGAACTCTGAGACAACACTAATAAGGGATATCCCAGAGAGCTATAAGAGTTTTTaGTCGCTGTTGTTGAACTCT +
Preference number: 5 (lower is better)
Translates to: FLSLLLNSETTLIRDIPESYKSF*SLLLNS
Trigger: AGAGTTCAACAACAGCGACAAAAAACTCTTATAGCT...CTCTGGGATATCCCTTATTAGTGTTGTCTCAGAGTTCAACAACAGCGACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000620305.2
ENST00000621767.1
ENST00000633397.1
CDS GCA 72 bp TGCGCCTCGCTCGACGGGTGGTGGCCCGGCAGCGGGTaGTCCAGGCCACCCAGGGGCGTCCCGGACGGCCCA +
Preference number: 6 (lower is better)
Translates to: CASLDGWWPGSG*SRPPRGVPDGP
Trigger: TGGGCCGTCCGGGACGCCCCTGGGTGGCCTGGAGCACCCGCTGCCGGGCCACCACCCGTCGAGCGAGGCGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS GCA 72 bp TCCCCGGGTGGGTGCGCCAGGATGTCGGTAAACCGCTaGGCCTCGCTCGACGGGTGGTGGCCCGGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: SPGGCARMSVNR*ASLDGWWPGSG
Trigger: CCCGCTGCCGGGCCACCACCCGTCGAGCGAGGCGCAGCGGTTTACCGACATCCTGGCGCACCCACCCGGGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS CCA 72 bp ATGTCGGTAAACCGCTGCGCCTCGCTCGACGGGTGGTaGCCCGGCAGCGGGTGCTCCAGGCCACCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: MSVNRCASLDGW*PGSGCSRPPRG
Trigger: GCCCCTGGGTGGCCTGGAGCACCCGCTGCCGGGCCACCACCCGTCGAGCGAGGCGCAGCGGTTTACCGACAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS CCA 72 bp AGGATGTCGGTAAACCGCTGCGCCTCGCTCGACGGGTaGTGGCCCGGCAGCGGGTGCTCCAGGCCACCCAGG +
Preference number: 6 (lower is better)
Translates to: RMSVNRCASLDG*WPGSGCSRPPR
Trigger: CCTGGGTGGCCTGGAGCACCCGCTGCCGGGCCACCACCCGTCGAGCGAGGCGCAGCGGTTTACCGACATCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS CCA 72 bp CGTGCATCGTGGCTCCAGTCACAACTCGCGGCCGCCTaGGCGCACAGCCCCGCATCGCTCGGCCCACGCTCT +
Preference number: 6 (lower is better)
Translates to: RASWLQSQLAAA*AHSPASLGPRS
Trigger: AGAGCGTGGGCCGAGCGATGCGGGGCTGTGCGCCCAGGCGGCCGCGAGTTGTGACTGGAGCCACGATGCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619297.1
ENST00000634033.1
CDS TCA 72 bp GGTGGGACAGGTGGTTTCCGTAGCTCGCCCCACCGTTaGCCGACAGCGACGAGAAGGGCGGGCTGGGTCCGA +
Preference number: 6 (lower is better)
Translates to: GGTGGFRSSPHR*PTATRRAGWVR
Trigger: TCGGACCCAGCCCGCCCTTCTCGTCGCTGTCGGTCAACGGTGGGGCGAGCTACGGAAACCACCTGTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS TCA 72 bp TCGAGGCTCCGTAGAAGGAGAAGGGACCATTGGGGATaGGCTCGCCCGGCTCCAGGCGGTCCACCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: SRLRRRRRDHWG*ARPAPGGPPAA
Trigger: GGCCGCTGGTGGACCGCCTGGAGCCGGGCGAGCTCATCCCCAATGGTCCCTTCTCCTTCTACGGAGCCTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621767.1
ENST00000633397.1
CDS GCA 72 bp GCGCACAGCCCCGCATCGCTCGGCCCACGCTCTGTCTaGCTCCGTCTAACCCCACAGTCGCTCGACTTTCTC +
Preference number: 6 (lower is better)
Translates to: AHSPASLGPRSV*LRLTPQSLDFL
Trigger: GAGAAAGTCGAGCGACTGTGGGGTTAGACGGAGGCAGACAGAGCGTGGGCCGAGCGATGCGGGGCTGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619297.1
ENST00000634033.1
CDS CAA 90 bp CACGTTGGCGCTCTCCGAGTCCTTGGCGTCGTCCTGCGACGGGTCTaGGGAATCCGGAGACAAACTGGGGTCACTGCCCGTGGTGGCCGA +
Preference number: 6 (lower is better)
Translates to: HVGALRVLGVVLRRV*GIRRQTGVTARGGR
Trigger: TCGGCCACCACGGGCAGTGACCCCAGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCGCCAACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS TCA 72 bp GGTAATCTCCGTAGAAGGAGAAGGGACCATTGGGGATaGGCTCGCCCGGCTCCAGGCGGTCCACCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: GNLRRRRRDHWG*ARPAPGGPPAA
Trigger: GGCCGCTGGTGGACCGCCTGGAGCCGGGCGAGCTCATCCCCAATGGTCCCTTCTCCTTCTACGGAGATTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS GCA 72 bp GACACGTTGGCGCTCTCCGAGTCCTTGGCGTCGTCCTaGGACGGGTCTTGGGAATCCGGAGACAAACTGGGG +
Preference number: 6 (lower is better)
Translates to: DTLALSESLASS*DGSWESGDKLG
Trigger: CCCCAGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCGCCAACGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS GCA 72 bp CAGCCTCTGGCTGAACTCCCGTCCCTCCCCCTCCACTaGCACGATCACCTCTGTTGGGCTGGGAAGAGGACT +
Preference number: 6 (lower is better)
Translates to: QPLAELPSLPLH*HDHLCWAGKRT
Trigger: AGTCCTCTTCCCAGCCCAACAGAGGTGATCGTGGCAGTGGAGGGGGAGGGACGGGAGTTCAGCCAGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1
CDS CCA 72 bp CGTCCTGCGACGGGTCTTGGGAATCCGGAGACAAACTaGGGTCACTGCCCGTGGTGGCCGAGTGAAGGCTGT +
Preference number: 6 (lower is better)
Translates to: RPATGLGNPETN*GHCPWWPSEGC
Trigger: ACAGCCTTCACTCGGCCACCACGGGCAGTGACCCCAGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS CCA 72 bp CTCTCCGAGTCCTTGGCGTCGTCCTGCGACGGGTCTTaGGAATCCGGAGACAAACTGGGGTCACTGCCCGTG +
Preference number: 6 (lower is better)
Translates to: LSESLASSCDGS*ESGDKLGSLPV
Trigger: CACGGGCAGTGACCCCAGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGACGACGCCAAGGACTCGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS CCA 72 bp CTTCCTTGTCCGACACGTTGGCGCTCTCCGAGTCCTTaGCGTCGTCCTGCGACGGGTCTTGGGAATCCGGAG +
Preference number: 6 (lower is better)
Translates to: LPCPTRWRSPSP*RRPATGLGNPE
Trigger: CTCCGGATTCCCAAGACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS CCA 72 bp CTTCCTTGTCCGACACGTTGGCGCTCTCCGAGTCCTTaGCGTCGTCCTGCGACGGGTCCGAGTGAAGGCTGT +
Preference number: 6 (lower is better)
Translates to: LPCPTRWRSPSP*RRPATGPSEGC
Trigger: ACAGCCTTCACTCGGACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619939.4
ENST00000631483.1
CDS CAA 72 bp GCTCTCCGAGTCCTTGGCGTCGTCCTGCGACGGGTCTaGGGAATCCGGAGACAAACTGGGGTCACTGCCCGT +
Preference number: 6 (lower is better)
Translates to: ALRVLGVVLRRV*GIRRQTGVTAR
Trigger: ACGGGCAGTGACCCCAGTTTGTCTCCGGATTCCCAAGACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS CAA 72 bp GCTTCCTTGTCCGACACGTTGGCGCTCTCCGAGTCCTaGGCGTCGTCCTGCGACGGGTCTTGGGAATCCGGA +
Preference number: 6 (lower is better)
Translates to: ASLSDTLALSES*ASSCDGSWESG
Trigger: TCCGGATTCCCAAGACCCGTCGCAGGACGACGCCAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS CAA 90 bp TTGGCGCCCAGGTTCTGGTCGTCATTCTCGTTGCTACCCGCTTCCTaGTCCGACACGTTGGCGCTCTCCGAGTCCTTGGCGTCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: LAPRFWSSFSLLPAS*SDTLALSESLASSC
Trigger: GCAGGACGACGCCAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGGAAGCGGGTAGCAACGAGAATGACGACCAGAACCTGGGCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000619939.4
ENST00000620305.2
ENST00000631483.1
ENST00000631517.1
CDS CAA 90 bp GGGCAAACAACCCCGAAGGCCTGGAGAATGCAGTTGCTGCAGAGCTaGGCTCCGGGAAAGACAGCAGTCCGGGCTACAACGCCCGAGGCT +
Preference number: 6 (lower is better)
Translates to: GQTTPKAWRMQLLQS*APGKTAVRATTPEA
Trigger: AGCCTCGGGCGTTGTAGCCCGGACTGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS GCA 72 bp CCGGGGCGAGGAAAAGAAGTCTCAGGCGGGAGAGAATaGGACCCTTCTGCTCAGAGCCCGCGGAGGAGTGAA +
Preference number: 6 (lower is better)
Translates to: PGRGKEVSGGRE*DPSAQSPRRSE
Trigger: TTCACTCCTCCGCGGGCTCTGAGCAGAAGGGTCGCATTCTCTCCCGCCTGAGACTTCTTTTCCTCGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614239.1
ENST00000619939.4
ENST00000620305.2
ENST00000631483.1
ENST00000673652.1
CDS GCA 72 bp GGGAAAGACAGCAGTCCGGGCTACAACGCCCGAGGCTaGCCTGTCTCTTCCAAGCTTGAAGGGGCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: GKDSSPGYNARG*PVSSKLEGASG
Trigger: CCCAGAAGCCCCTTCAAGCTTGGAAGAGACAGGGCAGCCTCGGGCGTTGTAGCCCGGACTGCTGTCTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS CAA 90 bp GCTCTGCCTGGAGGGCAAACAACCCCGAAGGCCTGGAGAATGCAGTaGCTGCAGAGCTTGGCTCCGGGAAAGACAGCAGTCCGGGCTACA +
Preference number: 6 (lower is better)
Translates to: ALPGGQTTPKAWRMQ*LQSLAPGKTAVRAT
Trigger: TGTAGCCCGGACTGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCCCTCCAGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS TCA 72 bp AGAATGCGACCCTTCTGCTCAGAGCCCGCGGAGGAGTaGAGGTCAGCGAGAACGGCGGCGGGAACGGAAATA +
Preference number: 6 (lower is better)
Translates to: RMRPFCSEPAEE*RSARTAAGTEI
Trigger: TATTTCCGTTCCCGCCGCCGTTCTCGCTGACCTTCACTCCTCCGCGGGCTCTGAGCAGAAGGGTCGCATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000614239.1
ENST00000619939.4
ENST00000620305.2
ENST00000631483.1
ENST00000673652.1
CDS GCA 72 bp AGAACAAAAGGAGCAGAGAAGCTTTGGATCCTAAACTaGCGGCATCGCGCCGCGGGTCTGGACGCGCCGAGC +
Preference number: 6 (lower is better)
Translates to: RTKGAEKLWILN*RHRAAGLDAPS
Trigger: GCTCGGCGCGTCCAGACCCGCGGCGCGATGCCGGCAGTTTAGGATCCAAAGCTTCTCTGCTCCTTTTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS GCA 72 bp GGCAAACAACCCCGAAGGCCTGGAGAATGCAGTTGCTaGAGAGCTTGGCTCCGGGAAAGACAGCAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: GKQPRRPGECSC*RAWLRERQQSG
Trigger: CCCGGACTGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS GCA 72 bp ACGGGTCTTGGGAATCCGGAGACAAACTGGGGTCACTaGCCGTGGTGGCCGAGTGAAGGCTGTTCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: TGLGNPETNWGH*PWWPSEGCSLW
Trigger: CCAAAGAGAACAGCCTTCACTCGGCCACCACGGGCAGTGACCCCAGTTTGTCTCCGGATTCCCAAGACCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS GCA 72 bp GGTTCATTTCTGTACAACCACGAACTCCGCAGACCGTaGGAGACCCCGCTACCACACGGCCGCCTCGTTCAT +
Preference number: 6 (lower is better)
Translates to: GSFLYNHELRRP*ETPLPHGRLVH
Trigger: ATGAACGAGGCGGCCGTGTGGTAGCGGGGTCTCGCACGGTCTGCGGAGTTCGTGGTTGTACAGAAATGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614239.1
ENST00000620305.2
CDS GCA 72 bp GAGGGCAAACAACCCCGAAGGCCTGGAGAATGCAGTTaGTGCAGAGCTTGGCTCCGGGAAAGACAGCAGTCC +
Preference number: 6 (lower is better)
Translates to: EGKQPRRPGECS*CRAWLRERQQS
Trigger: GGACTGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS GCA 72 bp TGCCTGGAGGGCAAACAACCCCGAAGGCCTGGAGAATaGAGTTGCTGCAGAGCTTGGCTCCGGGAAAGACAG +
Preference number: 6 (lower is better)
Translates to: CLEGKQPRRPGE*SCCRAWLRERQ
Trigger: CTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCCCTCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS CCA 72 bp GACACTGAGACTTCTCTGACCCTTCCGAACCCGAGGTaGGGTGGGGTATGTGCAGAAAGAGGGCTCCCCACT +
Preference number: 6 (lower is better)
Translates to: DTETSLTLPNPR*GGVCAERGLPT
Trigger: AGTGGGGAGCCCTCTTTCTGCACATACCCCACCCCACCTCGGGTTCGGAAGGGTCAGAGAAGTCTCAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1
CDS CAA 72 bp AGGTTCTGGTCGTCATTCTCGTTGCTACCCGCTTCCTaGTCCGACACGTTGGCGCTCTCCGAGTCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: RFWSSFSLLPAS*SDTLALSESLA
Trigger: CGCCAAGGACTCGGAGAGCGCCAACGTGTCGGACAAGGAAGCGGGTAGCAACGAGAATGACGACCAGAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000619939.4
ENST00000620305.2
ENST00000631483.1
ENST00000631517.1
CDS CAA 72 bp GGAGGGCAAACAACCCCGAAGGCCTGGAGAATGCAGTaGCTGCAGAGCTTGGCTCCGGGAAAGACAGCAGTC +
Preference number: 6 (lower is better)
Translates to: GGQTTPKAWRMQ*LQSLAPGKTAV
Trigger: GACTGCTGTCTTTCCCGGAGCCAAGCTCTGCAGCAACTGCATTCTCCAGGCCTTCGGGGTTGTTTGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616237.1
ENST00000631517.1
CDS CCA 72 bp GGGCCTTTTGCAGCCGGCACAGTGAACCATGGTCTTTaGTTTGGTCTGATGAGGCCCAGAGAGAGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GPFAAGTVNHGL*FGLMRPREREG
Trigger: CCCCTCTCTCTCTCTGGGCCTCATCAGACCAAACCAAAGACCATGGTTCACTGTGCCGGCTGCAAAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000614239.1
ENST00000619939.4
ENST00000620305.2
ENST00000631483.1
ENST00000673652.1
CDS CCA 72 bp CCTCCCCCTCCACTGCCACGATCACCTCTGTTGGGCTaGGAAGAGGACTTTCTAGATGCTCGAAGGCATCAG +
Preference number: 6 (lower is better)
Translates to: PPPPLPRSPLLG*EEDFLDARRHQ
Trigger: CTGATGCCTTCGAGCATCTAGAAAGTCCTCTTCCCAGCCCAACAGAGGTGATCGTGGCAGTGGAGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1
CDS CCA 72 bp TTTTGCAGCCGGCACAGTGAACCATGGTCTTTGGTTTaGTCTGATGAGGCCCAGAGAGAGAGAGGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: FCSRHSEPWSLV*SDEAQRERGAK
Trigger: CTTTGCCCCTCTCTCTCTCTGGGCCTCATCAGACCAAACCAAAGACCATGGTTCACTGTGCCGGCTGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000614239.1
ENST00000619939.4
ENST00000620305.2
ENST00000631483.1
ENST00000673652.1
CDS CCA 72 bp CACTGCCCGTGGTGGCCGAGTGAAGGCTGTTCTCTTTaGCAACACTGCTGTTACTTAGGTAATCCTCTTTGC +
Preference number: 6 (lower is better)
Translates to: HCPWWPSEGCSL*QHCCYLGNPLC
Trigger: GCAAAGAGGATTACCTAAGTAACAGCAGTGTTGCCAAAGAGAACAGCCTTCACTCGGCCACCACGGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS CCA 72 bp CGTCCTGCGACGGGTCCGAGTGAAGGCTGTTCTCTTTaGCAACACTGCTGTTACTTAGGTAATCCTCTTTGC +
Preference number: 6 (lower is better)
Translates to: RPATGPSEGCSL*QHCCYLGNPLC
Trigger: GCAAAGAGGATTACCTAAGTAACAGCAGTGTTGCCAAAGAGAACAGCCTTCACTCGGACCCGTCGCAGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619939.4
ENST00000631483.1
CDS CAA 72 bp CACCTCTCTTTGGAGGGGAAGTCCCTGATCTGGGGCTaGTCTAATTGGAGCAAGCGATCACAAAGTTGGAGT +
Preference number: 6 (lower is better)
Translates to: HLSLEGKSLIWG*SNWSKRSQSWS
Trigger: ACTCCAACTTTGTGATCGCTTGCTCCAATTAGACAAGCCCCAGATCAGGGACTTCCCCTCCAAAGAGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1
CDS GCA 72 bp TGGTGGCCGAGTGAAGGCTGTTCTCTTTGGCAACACTaGTGTTACTTAGGTAATCCTCTTTGCAGACGAACT +
Preference number: 6 (lower is better)
Translates to: WWPSEGCSLWQH*CYLGNPLCRRT
Trigger: AGTTCGTCTGCAAAGAGGATTACCTAAGTAACAGCAGTGTTGCCAAAGAGAACAGCCTTCACTCGGCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614239.1
ENST00000616237.1
ENST00000620305.2
ENST00000631517.1
CDS GCA 72 bp ACGGGTCCGAGTGAAGGCTGTTCTCTTTGGCAACACTaGTGTTACTTAGGTAATCCTCTTTGCAGACGAACT +
Preference number: 6 (lower is better)
Translates to: TGPSEGCSLWQH*CYLGNPLCRRT
Trigger: AGTTCGTCTGCAAAGAGGATTACCTAAGTAACAGCAGTGTTGCCAAAGAGAACAGCCTTCACTCGGACCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619939.4
ENST00000631483.1
CDS GCA 72 bp TTGTCTAATTGGAGCAAGCGATCACAAAGTTGGAGTTaGAGACTTAGGAAGAGTTCACTTTGTGCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: LSNWSKRSQSWS*RLRKSSLCAEG
Trigger: GCCTTCTGCACAAAGTGAACTCTTCCTAAGTCTGCAACTCCAACTTTGTGATCGCTTGCTCCAATTAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616237.1
ENST00000619939.4
ENST00000631483.1
ENST00000631517.1