RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LHPP (Homo sapiens)

Ensembl gene IDs: ENSG00000107902

Ensembl transcript IDs: ENST00000368839.1, ENST00000368842.10, ENST00000392757.8, ENST00000481452.1, ENST00000482963.1, ENST00000486535.1, ENST00000487190.1, ENST00000492187.1, ENST00000493240.1

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGAGGCGGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTGCTaGAGCAGCAGGTCCACTGCCTCTGCGAGGTTGTCCACGTACCCA +
Preference number: 1 (lower is better)
Translates to: GGGGALPGGHHLSAC*SSRSTASARLSTYP
Trigger: TGGGTACGTGGACAACCTCGCAGAGGCAGTGGACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCCGCCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR GCA 90 bp GGTGGAGGAGGCGGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTaGTGCAGCAGCAGGTCCACTGCCTCTGCGAGGTTGTCCACGTAC +
Preference number: 1 (lower is better)
Translates to: GGGGGALPGGHHLSA*CSSRSTASARLSTY
Trigger: GTACGTGGACAACCTCGCAGAGGCAGTGGACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCCGCCTCCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR CCA 90 bp GACTGGGAGGATAGAAAAAGCAGCGGGCTGGCATTGTTTCGGGGGTaGGGTGGTGGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACT +
Preference number: 1 (lower is better)
Translates to: DWEDRKSSGLALFRG*GGGQCAWAVAGRLT
Trigger: AGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACCACCCCACCCCCGAAACAATGCCAGCCCGCTGCTTTTTCTATCCTCCCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 90 bp GATTTGGGAGATTCCCAGAGGCCTGACAGGCCTGTCCCACCCTCCTaGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGGAG +
Preference number: 1 (lower is better)
Translates to: DLGDSQRPDRPVPPS*TSLQGAEVRAQAGE
Trigger: CTCCCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTCAGGCCTCTGGGAATCTCCCAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 90 bp GGTGGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTaGGCTGCAAGATCTGTGCATAGGAGGCCCCTGGGTTTCTTCCAG +
Preference number: 1 (lower is better)
Translates to: GGQCAWAVAGRLTWF*AARSVHRRPLGFFQ
Trigger: CTGGAAGAAACCCAGGGGCCTCCTATGCACAGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR GCA 90 bp AGGCCATCACTTGTCGGCGTGCTGCAGCAGCAGGTCCACTGCCTCTaGGAGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTG +
Preference number: 1 (lower is better)
Translates to: RPSLVGVLQQQVHCL*EVVHVPISLHFRMV
Trigger: CACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCTCGCAGAGGCAGTGGACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR CCA 90 bp AGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTaGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCT +
Preference number: 1 (lower is better)
Translates to: STLCALDAEATVLTV*HGSLHSALGSCPWS
Trigger: AGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR GCA 90 bp CGCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTaGCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGG +
Preference number: 1 (lower is better)
Translates to: RRGYSSHCVAWEPSQ*PRELPLVFVCKGDW
Trigger: CCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 90 bp CCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTaGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAG +
Preference number: 1 (lower is better)
Translates to: PPAHTGHDTFKSVQQ*VQKVPCVPWTQRLQ
Trigger: CTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 90 bp ACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTaGTCTTTGTCTGCAAAGGTGACTGGGAGGATAGAAAAAGCAGCG +
Preference number: 1 (lower is better)
Translates to: TVWHGSLHSALGSCP*SLSAKVTGRIEKAA
Trigger: CGCTGCTTTTTCTATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR GCA 90 bp ACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTaGCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAG +
Preference number: 1 (lower is better)
Translates to: TPSSLSSSGSRKYPV*LGRRGYSSHCVAWE
Trigger: CTCCCATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 90 bp TTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTaGACGCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTC +
Preference number: 1 (lower is better)
Translates to: FKSVQQWVQKVPCVP*TQRLQFSLCGMGAF
Trigger: GAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR TCA 90 bp GCAGAGTTTACTGAACTGTTAGTTTCCTCCTGCACACACCGGGCATaGCACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTG +
Preference number: 1 (lower is better)
Translates to: AEFTELLVSSCTHRA*HLQVCPAVGPESTL
Trigger: CAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAACAGTTCAGTAAACTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp GGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGACAGGGGTGGAGGAGGTaGGGCTCTCCTGGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: GQCAWAVAGRLTWFWAARQGWRR*GSPGRV
Trigger: CACCCGCCCAGGAGAGCCCCACCTCCTCCACCCCTG...TCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp GGGTGGTGGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCAGATTCCCAGAGGCCTaGCAGGCCTGTCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: GWWAVCLGSRREADLVLGRFPEA*QACPTL
Trigger: GAGGGTGGGACAGGCCTGTCAGGCCTCTGGGAATCT...GCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp GCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCCAGGGGTGGAGGAGGTaGGGCTCTCCTGGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: AVCLGSRREADLVLGCKIQGWRR*GSPGRV
Trigger: CACCCGCCCAGGAGAGCCCCACCTCCTCCACCCCTG...GATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp GGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGACAGTCGCAGGGAGGCTaGCTTGGTTCTGGGCTGCAA +
Preference number: 2 (lower is better)
Translates to: GQCAWAVAGRLTWFWAARQSQGG*LGSGLQ
Trigger: TTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTG...TCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp GCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGGGGCTGTCAGGGCCTTaGTTGGTCTGGGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: AEATVLTVWHGSLHSALGGLSGP*LVWALG
Trigger: CCCCAGTGCCCAGACCAACCAAGGCCCTGACAGCCC...CCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp CAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTTGTCAGGGCCTTGGTTaGTCTGGGCACTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: QCAWAVAGRLTWFWAARSCQGLG*SGHWGR
Trigger: CCTGCCCCAGTGCCCAGACCAACCAAGGCCCTGACA...AGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp CAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTTTCACTACAGGGAGCTaGAGTCAGGGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: QCAWAVAGRLTWFWAARSFTTGS*SQGPGR
Trigger: CCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAA...AGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp GCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGCAGTCGCAGGGAGGCTaGCTTGGTTCTGGGCTGCAA +
Preference number: 2 (lower is better)
Translates to: AEATVLTVWHGSLHSALGQSQGG*LGSGLQ
Trigger: TTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTG...CCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp TCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTGCATAGGAGGCCCCTaGGTTTCTTCCAGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: SHCVAWEPSQCPRELPLVCIGGP*VSSRLF
Trigger: GAAGAGCCTGGAAGAAACCCAGGGGCCTCCTATGCA...GACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp TCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGTGGGCAGTGTGCCTaGGCAGTCGCAGGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: SSLSSSGSRKYPVCLGRRGGQCA*AVAGRL
Trigger: CAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACC...TCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CAA 90 bp TGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTaGTCTGCAAAGGTGACTGGGAGGATAGAAAAAGCAGCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: WHGSLHSALGSCPWS*SAKVTGRIEKAAGW
Trigger: CCAGCCCGCTGCTTTTTCTATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR GCA 90 bp TGGGCTGCAAGATCTGTGCATAGGAGGCCCCTGGGTTTCTTCCAGGCTCTTCACCACTTGTCGGCGTGCTaGAGCAGCAGGTCCACTGCC +
Preference number: 2 (lower is better)
Translates to: WAARSVHRRPLGFFQALHHLSAC*SSRSTA
Trigger: GGCAGTGGACCTGCTGCTGCAGCACGCCGACAAGTG...GTGAAGAGCCTGGAAGAAACCCAGGGGCCTCCTATGCACAGATCTTGCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR-3UTR CCA 90 bp ATGGTGAGTGGTGAGTTCTGGGATTTGGGAGATTCCCAGAGGCCTGACAGGCCTGGGCCTTGGTTGGTCTaGGCACTGGGGCAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: MVSGEFWDLGDSQRPDRPGPWLV*ALGQVE
Trigger: CTCCACCTGCCCCAGTGCCCAGACCAACCAAGGCCC...AGGCCTGTCAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCACCACTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp GAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCATGGTGGGCAGTGTGCCTaGGCAGTCGCAGGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: ESTLCALDAEATVLTVWHGGQCA*AVAGRL
Trigger: CAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACC...ATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp TTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCTTCACTACAGGGAGCTaGAGTCAGGGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: FPPAHTGHDTFKSVQQWVFTTGS*SQGPGR
Trigger: CCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAA...GACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp CAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGATGCCCATGGTGAGTGGTaGGTTCTGGGATTTGGGAGA +
Preference number: 2 (lower is better)
Translates to: QCPRELPLVFVCKGDWEDAHGEW*VLGFGR
Trigger: TCTCCCAAATCCCAGAACTCACCACTCACCATGGGC...ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR GCA 90 bp CAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGATCAGGTAGGGAACAAATaGCTGCCCATGCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: QCPRELPLVFVCKGDWEDQVGNK*LPMQGR
Trigger: TCTGCCCTGCATGGGCAGGCATTTGTTCCCTACCTG...ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp GAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCATGGGCCTTGGTTGGTCTaGGCACTGGGGCAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: ESTLCALDAEATVLTVWHGPWLV*ALGQVE
Trigger: CTCCACCTGCCCCAGTGCCCAGACCAACCAAGGCCC...ATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp ACTGTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCGGGCTGTCAGGGCCTTaGTTGGTCTGGGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: TVSFLLHTPGMTPSSLSSGLSGP*LVWALG
Trigger: CCCCAGTGCCCAGACCAACCAAGGCCCTGACAGCCC...GCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp AGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTCGGGAGCTGCCCCTaGTCTTTGTCTGCAAAGGTG +
Preference number: 2 (lower is better)
Translates to: RGYSSHCVAWEPSQCPRELGSCP*SLSAKV
Trigger: CACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAG...CTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp GAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCGTACCCTGTGTGCCTTaGACGCAGAGGCTACAGTTC +
Preference number: 2 (lower is better)
Translates to: EATVLTVWHGSLHSALGSVPCVP*TQRLQF
Trigger: GAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTAC...GCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp AGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGGCCCATGGTGAGTGGTaGGTTCTGGGATTTGGGAGA +
Preference number: 2 (lower is better)
Translates to: RGYSSHCVAWEPSQCPREAHGEW*VLGFGR
Trigger: TCTCCCAAATCCCAGAACTCACCACTCACCATGGGC...CTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR GCA 90 bp CTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGGGGCTGCAAGATCTGTaGATAGGAGGCCCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: LHTPGMTPSSLSSSGSRKGLQDL*IGGPWV
Trigger: AACCCAGGGGCCTCCTATGCACAGATCTTGCAGCCC...CTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR GCA 90 bp CCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCAGCAGCAGGTCCACTaGCTCTGCGAGGTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: PESTLCALDAEATVLTVWQQQVH*LCEVVH
Trigger: GTGGACAACCTCGCAGAGGCAGTGGACCTGCTGCTG...CCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR-3UTR GCA 90 bp CCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAACATCACTTGTCGGCGTaGTGCAGCAGCAGGTCCACT +
Preference number: 2 (lower is better)
Translates to: PAHTGHDTFKSVQQWVQKHHLSA*CSSRST
Trigger: AGTGGACCTGCTGCTGCAGCACGCCGACAAGTGATG...TTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR-3UTR CCA 90 bp TGGGCTGCAAGATCTGTGCATAGGAGGCCCCTGGGTTTCTTCCAGGCTCTTCACCCTGTCCCACCCTCCTaGACTTCACTACAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: WAARSVHRRPLGFFQALHPVPPS*TSLQGA
Trigger: AGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGG...GTGAAGAGCCTGGAAGAAACCCAGGGGCCTCCTATGCACAGATCTTGCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp GTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTGTGCATAGGAGGCCCGTGAGTTCTGGGATTTaGGAGATTCCCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: VAGRLTWFWAARSVHRRPVSSGI*EIPRGL
Trigger: CAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCAC...GGGCCTCCTATGCACAGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp AAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTCGGGAGCTGCCCCTaGTCTTTGTCTGCAAAGGTG +
Preference number: 2 (lower is better)
Translates to: KSVQQWVQKVPCVPWTQRLGSCP*SLSAKV
Trigger: CACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAG...CCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp GTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTGTGAAATGCAAAGAGTCTaGAGAGGAGGCAGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: VCLGSRREADLVLGCKICEMQRV*RGGSGH
Trigger: ATGCCCACTGCCTCCTCTTCAGACTCTTTGCATTTC...ACAGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR GCA 90 bp ACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTACAAATGCCTGCCCATaGAGGGCAGAGGGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: TPGMTPSSLSSSGSRKYPTNACP*RAEGRR
Trigger: CCTTCTGCCCTCTGCCCTGCATGGGCAGGCATTTGT...AGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR GCA 90 bp GAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCATCAGGTCCACTGCCTCTaGGAGGTTGTCCACGTACCC +
Preference number: 2 (lower is better)
Translates to: ESTLCALDAEATVLTVWHQVHCL*EVVHVP
Trigger: GGGTACGTGGACAACCTCGCAGAGGCAGTGGACCTG...ATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR-3UTR CCA 90 bp TCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGACCTGTCCCACCCTCCTaGACTTCACTACAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: SSLSSSGSRKYPVCLGRRPVPPS*TSLQGA
Trigger: AGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGG...TCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CAA 90 bp CTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTaGGACGCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: LQVCPAVGPESTLCA*DAEATVLTVWHGSL
Trigger: AAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR GCA 90 bp AAAGAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGACAAATGCCTGCCCATaGAGGGCAGAGGGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: KESEEEAVGIVPLNLVRWTNACP*RAEGRR
Trigger: CCTTCTGCCCTCTGCCCTGCATGGGCAGGCATTTGT...CCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR GCA 90 bp TCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGACAGGTAGGGAACAAATaGCTGCCCATGCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: SSLSSSGSRKYPVCLGRRQVGNK*LPMQGR
Trigger: TCTGCCCTGCATGGGCAGGCATTTGTTCCCTACCTG...TCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp TGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGGTGAGTTCTGGGATTTaGGAGATTCCCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: WVQKVPCVPWTQRLQFSLVSSGI*EIPRGL
Trigger: CAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCAC...CAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp CCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAAGGCTGACTTGGTTCTaGGCTGCAAGATCTGTGCAT +
Preference number: 2 (lower is better)
Translates to: PAHTGHDTFKSVQQWVQKRLTWF*AARSVH
Trigger: ATGCACAGATCTTGCAGCCCAGAACCAAGTCAGCCT...TTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp ACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTTTTAAAGGCCCATGGTaGGTGGTGAGTTCTGGGATT +
Preference number: 2 (lower is better)
Translates to: TPGMTPSSLSSSGSRKYPFKGPW*VVSSGI
Trigger: AATCCCAGAACTCACCACTCACCATGGGCCTTTAAA...AGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR TCA 90 bp AAAGAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGTTTAAAGGCCCATGGTaGGTGGTGAGTTCTGGGATT +
Preference number: 2 (lower is better)
Translates to: KESEEEAVGIVPLNLVRWFKGPW*VVSSGI
Trigger: AATCCCAGAACTCACCACTCACCATGGGCCTTTAAA...CCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp ACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTCTGAATCTGGTTAGGTaGAGTTTACTGCATTTAAAG +
Preference number: 2 (lower is better)
Translates to: TPGMTPSSLSSSGSRKYPLNLVR*SLLHLK
Trigger: CTTTAAATGCAGTAAACTCCACCTAACCAGATTCAG...AGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CCA 90 bp ACTGTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCCTGAATCTGGTTAGGTaGAGTTTACTGCATTTAAAG +
Preference number: 2 (lower is better)
Translates to: TVSFLLHTPGMTPSSLSSLNLVR*SLLHLK
Trigger: CTTTAAATGCAGTAAACTCCACCTAACCAGATTCAG...GCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR GCA 72 bp GGCGGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTaGTGCAGCAGCAGGTCCACTGCCTCTGCGAGGTTG +
Preference number: 3 (lower is better)
Translates to: GGALPGGHHLSA*CSSRSTASARL
Trigger: CAACCTCGCAGAGGCAGTGGACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR GCA 72 bp GGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTGCTaGAGCAGCAGGTCCACTGCCTCTGCGAGGTTGTCC +
Preference number: 3 (lower is better)
Translates to: GALPGGHHLSAC*SSRSTASARLS
Trigger: GGACAACCTCGCAGAGGCAGTGGACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR-3UTR CAA 90 bp TCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGGAGGGCTGTCAGGGCCTaGGTTGGTCTGGGCACTGGG +
Preference number: 3 (lower is better)
Translates to: SHPPGLHYRELKSGPRQGRAVRA*VGLGTG
Trigger: CCCAGTGCCCAGACCAACCAAGGCCCTGACAGCCCT...CCCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CAA 90 bp TCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTAGGGCTGTCAGGGCCTaGGTTGGTCTGGGCACTGGG +
Preference number: 3 (lower is better)
Translates to: SLCGMGAFTVPSGAAPGLRAVRA*VGLGTG
Trigger: CCCAGTGCCCAGACCAACCAAGGCCCTGACAGCCCT...AAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CAA 90 bp TCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTAGCAGCGGGCTGGCATaGTTTCGGGGGTGGGGTGGT +
Preference number: 3 (lower is better)
Translates to: SLCGMGAFTVPSGAAPGLSSGLA*FRGWGG
Trigger: ACCACCCCACCCCCGAAACAATGCCAGCCCGCTGCT...AAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 72 bp TGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTaGGCTGCAAGATCTGTGCATAGGAGGCCCCTGGGT +
Preference number: 3 (lower is better)
Translates to: CAWAVAGRLTWF*AARSVHRRPLG
Trigger: ACCCAGGGGCCTCCTATGCACAGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CAA 90 bp GCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGCGCAGGGAGGCTGACTaGGTTCTGGGCTGCAAGATC +
Preference number: 3 (lower is better)
Translates to: AEATVLTVWHGSLHSALGRREAD*VLGCKI
Trigger: GATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCG...CCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CAA 90 bp TCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTAGCTGCCCCTGGTCTTaGTCTGCAAAGGTGACTGGG +
Preference number: 3 (lower is better)
Translates to: SLCGMGAFTVPSGAAPGLSCPWS*SAKVTG
Trigger: CCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCT...AAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 72 bp TGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTaGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: CALDAEATVLTV*HGSLHSALGSC
Trigger: GCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CAA 90 bp CCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCCAGGAGGCCATCACTaGTCGGCGTGCTGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: PESTLCALDAEATVLTVWPGGHH*SACCSS
Trigger: GCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGG...CCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR-3UTR CAA 90 bp GCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGGGTGAGTTCTGGGATTaGGGAGATTCCCAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: AEATVLTVWHGSLHSALGGEFWD*GDSQRP
Trigger: AGGCCTCTGGGAATCTCCCAAATCCCAGAACTCACC...CCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR-3UTR CAA 90 bp GAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGAGTACTGCCTCTGCGAGGTaGTCCACGTACCCATCAGCC +
Preference number: 3 (lower is better)
Translates to: ESEEEAVGIVPLNLVRWSTASAR*STYPSA
Trigger: GGCTGATGGGTACGTGGACAACCTCGCAGAGGCAGT...ACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
3UTR CCA 72 bp CATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTaGTCTTTGTCTGCAAAGGTGACTGGGAGGATAGAA +
Preference number: 3 (lower is better)
Translates to: HGSLHSALGSCP*SLSAKVTGRIE
Trigger: TTCTATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 72 bp CACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTaGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAG +
Preference number: 3 (lower is better)
Translates to: HTGHDTFKSVQQ*VQKVPCVPWTQ
Trigger: CTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR GCA 72 bp TACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTaGCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAA +
Preference number: 3 (lower is better)
Translates to: YSSHCVAWEPSQ*PRELPLVFVCK
Trigger: TTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 72 bp GTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTaGACGCAGAGGCTACAGTTCTCACTGTGTGGCATG +
Preference number: 3 (lower is better)
Translates to: VQQWVQKVPCVP*TQRLQFSLCGM
Trigger: CATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR GCA 72 bp AGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTaGCTTGGACGCAGAGGCTACAGTTCTCACTGTGTG +
Preference number: 3 (lower is better)
Translates to: SLSSSGSRKYPV*LGRRGYSSHCV
Trigger: CACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR TCA 72 bp ACTGAACTGTTAGTTTCCTCCTGCACACACCGGGCATaGCACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAA +
Preference number: 3 (lower is better)
Translates to: TELLVSSCTHRA*HLQVCPAVGPE
Trigger: TTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAACAGTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CCA 72 bp GAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTaGAGTTTACTGCATTTAAAGGCCCATGGTGAGTGG +
Preference number: 3 (lower is better)
Translates to: EAVGIVPLNLVR*SLLHLKAHGEW
Trigger: CCACTCACCATGGGCCTTTAAATGCAGTAAACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp TCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCCGCCAGCCAGCCGCTTaGCCCACGGTGCCATGGCGC +
Preference number: 4 (lower is better)
Translates to: SHCVAWEPSQCPRELPLVRQPAA*PTVPWR
Trigger: GCGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCG...GACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGCAGGGGTGGAGGAGGTaGGGCTCTCCTGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: VPPSWTSLQGAEVRAQAGQGWRR*GSPGRV
Trigger: CACCCGCCCAGGAGAGCCCCACCTCCTCCACCCCTG...CCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp AGGCGGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTGCTGCAGCAGCAGGTCTGTCAGGGCCTTGGTTaGTCTGGGCACTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRGSPRRPSLVGVLQQQVCQGLG*SGHWGR
Trigger: CCTGCCCCAGTGCCCAGACCAACCAAGGCCCTGACA...GACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR CCA 90 bp GGGTGGTGGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCGCCTTCACTTCCGGATaGTGCTCGTCACTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GWWAVCLGSRREADLVLGAFTSG*CSSLGL
Trigger: CAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGC...GCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp ACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCCTCATTCCACACCGCTaGGCACCGCCGACGTCGCCC +
Preference number: 4 (lower is better)
Translates to: TGLSHPPGLHYRELKSGPLIPHR*APPTSP
Trigger: GGGCGACGTCGGCGGTGCCCAGCGGTGTGGAATGAG...GGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS-3UTR GCA 90 bp GGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGACACTTGTCGGCGTGCTaGAGCAGCAGGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GQCAWAVAGRLTWFWAARHLSAC*SSRSTA
Trigger: GGCAGTGGACCTGCTGCTGCAGCACGCCGACAAGTG...TCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp AGGCGGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTGCTGCAGCAGCAGGTCGGGCTGCAAGATCTGTaGATAGGAGGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RRGSPRRPSLVGVLQQQVGLQDL*IGGPWV
Trigger: AACCCAGGGGCCTCCTATGCACAGATCTTGCAGCCC...GACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR GCA 90 bp GGGTGGTGGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCGGGCTGCAAGATCTGTaGATAGGAGGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GWWAVCLGSRREADLVLGGLQDL*IGGPWV
Trigger: AACCCAGGGGCCTCCTATGCACAGATCTTGCAGCCC...GCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp ACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCTGGGAGCCTTCACAGTaGCCTCGGGAGCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TGLSHPPGLHYRELKSGPWEPSQ*PRELPL
Trigger: CAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCA...GGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGGGAACGCTTCAGTCTaGCCACCGCCTCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: VWHGSLHSALGSCPWSLSGNASV*PPPPPS
Trigger: GCTCGGTGGAGGCGGTGGCCAGACTGAAGCGTTCCC...AGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTGTGCATAGGAGGCCCGATCTGGCAGGCAGCTaGTGCCGGGGCGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: VAGRLTWFWAARSVHRRPDLAGS*CRGGHL
Trigger: GAGGTGACCGCCCCGGCACCAGCTGCCTGCCAGATC...GGGCCTCCTATGCACAGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GGGTGGTGGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCGAGCGGACTCCGTCATaGATGAGCAGGTATGGTCGC +
Preference number: 4 (lower is better)
Translates to: GWWAVCLGSRREADLVLGERTPS*MSRYGR
Trigger: GCGACCATACCTGCTCATCCATGACGGAGTCCGCTC...GCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCGGGCCTTGGTTGGTCTaGGCACTGGGGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DRPVPPSWTSLQGAEVRAGPWLV*ALGQVE
Trigger: CTCCACCTGCCCCAGTGCCCAGACCAACCAAGGCCC...GGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp TCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTGGGCTGTCAGGGCCTTaGTTGGTCTGGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: SLCGMGAFTVPSGAAPGLGLSGP*LVWALG
Trigger: CCCCAGTGCCCAGACCAACCAAGGCCCTGACAGCCC...AAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp AGGCGGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTGCTGCAGCAGCAGGTCGAAAAAGCAGCGGGCTaGCATTGTTTCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRGSPRRPSLVGVLQQQVEKAAG*HCFGGG
Trigger: CCCACCCCCGAAACAATGCCAGCCCGCTGCTTTTTC...GACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR TCA 90 bp AGGCGGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTGCTGCAGCAGCAGGTCGCCCATGGTGAGTGGTaGGTTCTGGGATTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RRGSPRRPSLVGVLQQQVAHGEW*VLGFGR
Trigger: TCTCCCAAATCCCAGAACTCACCACTCACCATGGGC...GACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR GCA 90 bp AGGCGGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTGCTGCAGCAGCAGGTCTCTGCGACTCGTTGGTaGAGAACCTCACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RRGSPRRPSLVGVLQQQVSATRW*RTSPSA
Trigger: GGCTGAAGGTGAGGTTCTGCACCAACGAGTCGCAGA...GACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR GCA 90 bp GTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTCACTTGTCGGCGTGCTaGAGCAGCAGGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: VWHGSLHSALGSCPWSLSHLSAC*SSRSTA
Trigger: GGCAGTGGACCTGCTGCTGCAGCACGCCGACAAGTG...AGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp ACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTCATGGCGCCCGGCCCTaGTCCTCAGCTCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TPGMTPSSLSSSGSRKYPHGARP*SSAPRP
Trigger: GGGACGCGGAGCTGAGGAGCAGGGCCGGGCGCCATG...AGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS-3UTR CCA 90 bp CCTGACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGGGAACGCTTCAGTCTaGCCACCGCCTCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: PDRPVPPSWTSLQGAEVRGNASV*PPPPPS
Trigger: GCTCGGTGGAGGCGGTGGCCAGACTGAAGCGTTCCC...CCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTGTGGGCTGTCAGGGCCTTaGTTGGTCTGGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: VCLGSRREADLVLGCKICGLSGP*LVWALG
Trigger: CCCCAGTGCCCAGACCAACCAAGGCCCTGACAGCCC...ACAGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp TCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTGCATTGTTTCGGGGGTaGGGTGGTGGGCAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SLCGMGAFTVPSGAAPGLALFRG*GGGQCA
Trigger: GGCACACTGCCCACCACCCCACCCCCGAAACAATGC...AAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp CAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGATTGCTCCTTCAGGATCTaGCAGGCAGCTGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: QCPRELPLVFVCKGDWEDCSFRI*QAAGAG
Trigger: CCCGGCACCAGCTGCCTGCCAGATCCTGAAGGAGCA...ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp CACAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGCGTCACTGGGCCTGGTaGGCTTCCACTCCTATCGCT +
Preference number: 4 (lower is better)
Translates to: HSALGSCPWSLSAKVTGRRHWAW*ASTPIA
Trigger: AGCGATAGGAGTGGAAGCCCACCAGGCCCAGTGACG...CCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR CCA 90 bp ATGGTGAGTGGTGAGTTCTGGGATTTGGGAGATTCCCAGAGGCCTGACAGGCCTCAGGGGTGGAGGAGGTaGGGCTCTCCTGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: MVSGEFWDLGDSQRPDRPQGWRR*GSPGRV
Trigger: CACCCGCCCAGGAGAGCCCCACCTCCTCCACCCCTG...AGGCCTGTCAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCACCACTCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGACCTGTCCCACCCTCCTaGACTTCACTACAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GQCAWAVAGRLTWFWAARPVPPS*TSLQGA
Trigger: AGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGG...TCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp TGGGCTGCAAGATCTGTGCATAGGAGGCCCCTGGGTTTCTTCCAGGCTCTTCACGGTGGGCAGTGTGCCTaGGCAGTCGCAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WAARSVHRRPLGFFQALHGGQCA*AVAGRL
Trigger: CAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACC...GTGAAGAGCCTGGAAGAAACCCAGGGGCCTCCTATGCACAGATCTTGCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp CAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGATGCATTGTTTCGGGGGTaGGGTGGTGGGCAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: QCPRELPLVFVCKGDWEDALFRG*GGGQCA
Trigger: GGCACACTGCCCACCACCCCACCCCCGAAACAATGC...ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGCTCGGGAGCTGCCCCTaGTCTTTGTCTGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPPSWTSLQGAEVRAQAGLGSCP*SLSAKV
Trigger: CACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAG...CCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTTCAAATCCCAGCCTCTaGAGCTGCCCCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VWHGSLHSALGSCPWSLSSNPSL*SCPTSS
Trigger: AGAGCTGGTGGGGCAGCTTCAGAGGCTGGGATTTGA...AGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGTTCACTACAGGGAGCTaGAGTCAGGGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AEATVLTVWHGSLHSALGFTTGS*SQGPGR
Trigger: CCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAA...CCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GGCCTGACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCACAGTCGCAGGGAGGCTaGCTTGGTTCTGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLTGLSHPPGLHYRELKSQSQGG*LGSGLQ
Trigger: TTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTG...TGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGTGCACACACCGGGCATaGCACCTTCAAGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VPPSWTSLQGAEVRAQAGCTHRA*HLQVCP
Trigger: TGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCA...CCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp ACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCTCTGCCCGGGACTTCTaGGACTCGTTGGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: TGLSHPPGLHYRELKSGPSARDF*DSLVQN
Trigger: GTTCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGA...GGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp GGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGACAGGTAGGGAACAAATaGCTGCCCATGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GQCAWAVAGRLTWFWAARQVGNK*LPMQGR
Trigger: TCTGCCCTGCATGGGCAGGCATTTGTTCCCTACCTG...TCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTGTGCATAGGAGGCCCGCCTTCACTTCCGGATaGTGCTCGTCACTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VAGRLTWFWAARSVHRRPAFTSG*CSSLGL
Trigger: CAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGC...GGGCCTCCTATGCACAGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCCCTGTCCCACCCTCCTaGACTTCACTACAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AVCLGSRREADLVLGCKIPVPPS*TSLQGA
Trigger: AGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGG...GATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp ACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCCCACCACCTCGGCTTTaGTGCCACAGGCATACTCAA +
Preference number: 4 (lower is better)
Translates to: TGLSHPPGLHYRELKSGPPPPRL*CHRHTQ
Trigger: TTGAGTATGCCTGTGGCATCAAAGCCGAGGTGGTGG...GGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp TGCCTCTGCGAGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTGCTCCAGTCGCAGGGAGGCTaGCTTGGTTCTGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: CLCEVVHVPISLHFRMVLQSQGG*LGSGLQ
Trigger: TTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTG...GAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCTCGCAGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR TCA 90 bp GCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTGCACACACCGGGCATaGCACCTTCAAGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AVCLGSRREADLVLGCKICTHRA*HLQVCP
Trigger: TGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCA...GATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp GTGCCCCTGAATCTGGTTAGGTGGAGTTTACTGCATTTAAAGGCCCATGGTGAGCGCCAGCCAGCCGCTTaGCCCACGGTGCCATGGCGC +
Preference number: 4 (lower is better)
Translates to: VPLNLVRWSLLHLKAHGERQPAA*PTVPWR
Trigger: GCGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCG...CTCACCATGGGCCTTTAAATGCAGTAAACTCCACCTAACCAGATTCAGGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp CCTGACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGTCTGCCCGGGACTTCTaGGACTCGTTGGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: PDRPVPPSWTSLQGAEVRSARDF*DSLVQN
Trigger: GTTCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGA...CCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp GGCCTGACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGGCGGTCACCTCCTaGTCAGAGATGTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: GLTGLSHPPGLHYRELKSGAVTS*SEMSNP
Trigger: GGGATTTGACATCTCTGAGCAGGAGGTGACCGCCCC...TGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp GGGTGGTGGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTCCACTCCTATCGCTTaGAGGGCAGACTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: GWWAVCLGSRREADLVLGSTPIA*RADLKN
Trigger: GTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGA...GCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp CAGCAGGTCCACTGCCTCTGCGAGGTTGTCCACGTACCCATCAGCCTTCACTTCCAGGTCCACTGCCTCTaGGAGGTTGTCCACGTACCC +
Preference number: 4 (lower is better)
Translates to: QQVHCLCEVVHVPISLHFQVHCL*EVVHVP
Trigger: GGGTACGTGGACAACCTCGCAGAGGCAGTGGACCTG...GAAGTGAAGGCTGATGGGTACGTGGACAACCTCGCAGAGGCAGTGGACCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR CCA 90 bp GAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCATGATCTGGCAGGCAGCTaGTGCCGGGGCGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: ESTLCALDAEATVLTVWHDLAGS*CRGGHL
Trigger: GAGGTGACCGCCCCGGCACCAGCTGCCTGCCAGATC...ATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp AAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGTGCTCCTTCAGGATCTaGCAGGCAGCTGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: KSVQQWVQKVPCVPWTQRCSFRI*QAAGAG
Trigger: CCCGGCACCAGCTGCCTGCCAGATCCTGAAGGAGCA...CCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp CAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGATGAGCGGACTCCGTCATaGATGAGCAGGTATGGTCGC +
Preference number: 4 (lower is better)
Translates to: QCPRELPLVFVCKGDWEDERTPS*MSRYGR
Trigger: GCGACCATACCTGCTCATCCATGACGGAGTCCGCTC...ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp AGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGGCTCGTCACTGGGCCTaGTGGGCTTCCACTCCTATC +
Preference number: 4 (lower is better)
Translates to: RGYSSHCVAWEPSQCPREARHWA*WASTPI
Trigger: GATAGGAGTGGAAGCCCACCAGGCCCAGTGACGAGC...CTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR CCA 90 bp ACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGGGCCTTGGTTGGTCTaGGCACTGGGGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TPGMTPSSLSSSGSRKYPGPWLV*ALGQVE
Trigger: CTCCACCTGCCCCAGTGCCCAGACCAACCAAGGCCC...AGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp CTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTGTCAGGGCCTTGGTTaGTCTGGGCACTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LHTPGMTPSSLSSSGSRKCQGLG*SGHWGR
Trigger: CCTGCCCCAGTGCCCAGACCAACCAAGGCCCTGACA...CTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGTGGGCAGTGTGCCTaGGCAGTCGCAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSFLLHTPGMTPSSLSSSGGQCA*AVAGRL
Trigger: CAGCCTCCCTGCGACTGCCCAGGCACACTGCCCACC...ACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCCTCGGGAGCTGCCCCTaGTCTTTGTCTGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: EATVLTVWHGSLHSALGSLGSCP*SLSAKV
Trigger: CACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAG...GCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp CACAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGGTACCCTGTGTGCCTTaGACGCAGAGGCTACAGTTC +
Preference number: 4 (lower is better)
Translates to: HSALGSCPWSLSAKVTGRVPCVP*TQRLQF
Trigger: GAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTAC...CCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp CCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGGACTCCGTCATGGATaGGCAGGTATGGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: PAHTGHDTFKSVQQWVQKGLRHG*AGMVAG
Trigger: GCCTGCGACCATACCTGCTCATCCATGACGGAGTCC...TTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCCCACCACCTCGGCTTTaGTGCCACAGGCATACTCAA +
Preference number: 4 (lower is better)
Translates to: EATVLTVWHGSLHSALGSPPPRL*CHRHTQ
Trigger: TTGAGTATGCCTGTGGCATCAAAGCCGAGGTGGTGG...GCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGACTTGCAGGGCAGACTTaGAAAACTCAGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GQCAWAVAGRLTWFWAARLAGQT*KTQEKA
Trigger: AGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAG...TCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGAGTAGATTCCCAGAGGCCTaGCAGGCCTGTCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: ESEEEAVGIVPLNLVRWSRFPEA*QACPTL
Trigger: GAGGGTGGGACAGGCCTGTCAGGCCTCTGGGAATCT...ACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp ACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTAGATTCCCAGAGGCCTaGCAGGCCTGTCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: TPGMTPSSLSSSGSRKYPRFPEA*QACPTL
Trigger: GAGGGTGGGACAGGCCTGTCAGGCCTCTGGGAATCT...AGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp AGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCATCACTTGTCGGCGTaGTGCAGCAGCAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: RGYSSHCVAWEPSQCPREHHLSA*CSSRST
Trigger: AGTGGACCTGCTGCTGCAGCACGCCGACAAGTGATG...CTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp CAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGATTTCACTTCCGGATGGTaGTCGTCACTGGGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: QCPRELPLVFVCKGDWEDFTSGW*SSLGLN
Trigger: GTTCAGGCCCAGTGACGAGCACCATCCGGAAGTGAA...ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS-3UTR CCA 90 bp TCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCACTTCTGCGACTCGTTaGTGCAGAACCTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: SHCVAWEPSQCPRELPLVTSATR*CRTSPS
Trigger: TGAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGT...GACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp CAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGATTGCATAGGAGGCCCCTaGGTTTCTTCCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QCPRELPLVFVCKGDWEDCIGGP*VSSRLF
Trigger: GAAGAGCCTGGAAGAAACCCAGGGGCCTCCTATGCA...ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp TCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGGAAGTCTGTCCAGCAGTaGGTCCAGAAAGTACCCTGT +
Preference number: 4 (lower is better)
Translates to: SHPPGLHYRELKSGPRQGKSVQQ*VQKVPC
Trigger: ACAGGGTACTTTCTGGACCCACTGCTGGACAGACTT...CCCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp CCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAATCAAATCCCAGCCTCTaGAGCTGCCCCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PAHTGHDTFKSVQQWVQKSNPSL*SCPTSS
Trigger: AGAGCTGGTGGGGCAGCTTCAGAGGCTGGGATTTGA...TTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGAGATCTGATCAAATTCTaGGCGGACTCCGTCATGGAT +
Preference number: 4 (lower is better)
Translates to: GQCAWAVAGRLTWFWAARDLIKF*ADSVMD
Trigger: ATCCATGACGGAGTCCGCTCAGAATTTGATCAGATC...TCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp TCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCACGCCCTTTTCCCAGTaGTATGAGCACAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SHCVAWEPSQCPRELPLVTPFSQ*YEHRFF
Trigger: GAAAAACCTGTGCTCATATCACTGGGAAAAGGGCGT...GACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp TTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCGGGGCGGTCACCTCCTaGTCAGAGATGTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: FPPAHTGHDTFKSVQQWVGAVTS*SEMSNP
Trigger: GGGATTTGACATCTCTGAGCAGGAGGTGACCGCCCC...GACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp TCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGGGCTTTCTCCTGCGTCTaGAATTACCACACAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SHPPGLHYRELKSGPRQGAFSCV*NYHTVW
Trigger: CCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGC...CCCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp AGGCGGGGCTCTCCCAGGAGGCCATCACTTGTCGGCGTGCTGCAGCAGCAGGTCAGAAAAGCTTTCTCCTaGGTCTGCAATTACCACACA +
Preference number: 4 (lower is better)
Translates to: RRGSPRRPSLVGVLQQQVRKAFS*VCNYHT
Trigger: TGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTTCT...GACCTGCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGGGAGAGCCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR GCA 90 bp AAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCATCACTTGTCGGCGTaGTGCAGCAGCAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: KSVQQWVQKVPCVPWTQRHHLSA*CSSRST
Trigger: AGTGGACCTGCTGCTGCAGCACGCCGACAAGTGATG...CCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp TTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCACAAATGCCTGCCCATaGAGGGCAGAGGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FPPAHTGHDTFKSVQQWVTNACP*RAEGRR
Trigger: CCTTCTGCCCTCTGCCCTGCATGGGCAGGCATTTGT...GACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp GGCCTGACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCACCCCTGGTCTTTGTCTaGAAAGGTGACTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GLTGLSHPPGLHYRELKSPLVFV*KGDWED
Trigger: ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGG...TGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp TCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGAGTTTATGGGAGCCTTCACAGTaGCCTCGGGAGCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SEEEAVGIVPLNLVRWSLWEPSQ*PRELPL
Trigger: CAGGGGCAGCTCCCGAGGGCACTGTGAAGGCTCCCA...TAAACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp CAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTAGAAAGTACCCTGTGTaGCTTGGACGCAGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: QCAWAVAGRLTWFWAARSRKYPV*LGRRGY
Trigger: GTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCT...AGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp GTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTGTGCATAGGAGGCCCAGAAAGTACCCTGTGTaGCTTGGACGCAGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VAGRLTWFWAARSVHRRPRKYPV*LGRRGY
Trigger: GTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCT...GGGCCTCCTATGCACAGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp ATGGTGAGTGGTGAGTTCTGGGATTTGGGAGATTCCCAGAGGCCTGACAGGCCTTTCCCGGTGCGCACCTaGAGCGCTCTCATTCCACAC +
Preference number: 4 (lower is better)
Translates to: MVSGEFWDLGDSQRPDRPFPVRT*SALIPH
Trigger: GTGTGGAATGAGAGCGCTGCAGGTGCGCACCGGGAA...AGGCCTGTCAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCACCACTCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS-3UTR CCA 90 bp TCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGATGGTGCTCGTCACTaGGCCTGGTGGGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: SSLSSSGSRKYPVCLGRRDGARH*AWWAST
Trigger: AGTGGAAGCCCACCAGGCCCAGTGACGAGCACCATC...TCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR TCA 90 bp TCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGGCTTTTCCCAGTGATATaGGCACAGGTTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SHPPGLHYRELKSGPRQGLFPVI*AQVFPA
Trigger: AGCTGGAAAAACCTGTGCTCATATCACTGGGAAAAG...CCCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp AAAGAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGTTCACTACAGGGAGCTaGAGTCAGGGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KESEEEAVGIVPLNLVRWFTTGS*SQGPGR
Trigger: CCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAA...CCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATTCCAGGCTCTTCACTaGAATGCAAAGAGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GQCAWAVAGRLTWFWAARFQALH*NAKSLK
Trigger: CTTCAGACTCTTTGCATTTCAGTGAAGAGCCTGGAA...TCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp TGGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGCAAGGCAGAGTTTACTaGACTGTTAGTTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: WAVCLGSRREADLVLGCKQGRVY*TVSFLL
Trigger: CAGGAGGAAACTAACAGTTCAGTAAACTCTGCCTTG...CTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp AAAGAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGCAGCAGCAGGTCCACTaGCTCTGCGAGGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KESEEEAVGIVPLNLVRWQQQVH*LCEVVH
Trigger: GTGGACAACCTCGCAGAGGCAGTGGACCTGCTGCTG...CCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp TGCCTCTGCGAGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTGCTCATGGATGAGCAGGTATaGTCGCAGGCCTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: CLCEVVHVPISLHFRMVLMDEQV*SQALLL
Trigger: AAGGAGCAAGGCCTGCGACCATACCTGCTCATCCAT...GAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCTCGCAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR CCA 90 bp CAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGATAGGCTGACTTGGTTCTaGGCTGCAAGATCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QCPRELPLVFVCKGDWEDRLTWF*AARSVH
Trigger: ATGCACAGATCTTGCAGCCCAGAACCAAGTCAGCCT...ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp CCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGGAAAAAGCAGCGGGCTaGCATTGTTTCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PESTLCALDAEATVLTVWEKAAG*HCFGGG
Trigger: CCCACCCCCGAAACAATGCCAGCCCGCTGCTTTTTC...CCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GGCCTGACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGATCTGATCAAATTCTaGGCGGACTCCGTCATGGAT +
Preference number: 4 (lower is better)
Translates to: GLTGLSHPPGLHYRELKSDLIKF*ADSVMD
Trigger: ATCCATGACGGAGTCCGCTCAGAATTTGATCAGATC...TGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCTTGGATGTGTCGATCTaGTCAAATTCTGAGCGGACT +
Preference number: 4 (lower is better)
Translates to: DRPVPPSWTSLQGAEVRALDVSI*SNSERT
Trigger: AGTCCGCTCAGAATTTGATCAGATCGACACATCCAA...GGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp CCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGGCCCATGGTGAGTGGTaGGTTCTGGGATTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PESTLCALDAEATVLTVWAHGEW*VLGFGR
Trigger: TCTCCCAAATCCCAGAACTCACCACTCACCATGGGC...CCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTGAAATGCAAAGAGTCTaGAGAGGAGGCAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VCPAVGPESTLCALDAEAEMQRV*RGGSGH
Trigger: ATGCCCACTGCCTCCTCTTCAGACTCTTTGCATTTC...AGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTTCCAGGCTCTTCACTaGAATGCAAAGAGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AVCLGSRREADLVLGCKIFQALH*NAKSLK
Trigger: CTTCAGACTCTTTGCATTTCAGTGAAGAGCCTGGAA...GATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp ATGGTGAGTGGTGAGTTCTGGGATTTGGGAGATTCCCAGAGGCCTGACAGGCCTTCTGCGACTCGTTGGTaGAGAACCTCACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: MVSGEFWDLGDSQRPDRPSATRW*RTSPSA
Trigger: GGCTGAAGGTGAGGTTCTGCACCAACGAGTCGCAGA...AGGCCTGTCAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCACCACTCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp AAAGAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGTTCACTTCCGGATGGTaGTCGTCACTGGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KESEEEAVGIVPLNLVRWFTSGW*SSLGLV
Trigger: CACCAGGCCCAGTGACGAGCACCATCCGGAAGTGAA...CCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR GCA 90 bp GTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTACAAATGCCTGCCCATaGAGGGCAGAGGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VSFLLHTPGMTPSSLSSSTNACP*RAEGRR
Trigger: CCTTCTGCCCTCTGCCCTGCATGGGCAGGCATTTGT...ACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACTTCTGCGACTCGTTaGTGCAGAACCTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: VCPAVGPESTLCALDAEATSATR*CRTSPS
Trigger: TGAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGT...AGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp TGGGCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGAATTACCACACAGTTTaGGTTGGATGTGTCGATCTG +
Preference number: 4 (lower is better)
Translates to: WAVCLGSRREADLVLGCKNYHTV*VGCVDL
Trigger: CAGATCGACACATCCAACCCAAACTGTGTGGTAATT...CTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp AAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGGTGAGTTCTGGGATTTaGGAGATTCCCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSVQQWVQKVPCVPWTQRVSSGI*EIPRGL
Trigger: CAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCAC...CCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTaGCATGGGAGCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: VCPAVGPESTLCALDAEATVLTV*HGSLHS
Trigger: ACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGT...AGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CAA 72 bp AGCCTTCACAGTGCCCTCGGGAGCTGCCCCTGGTCTTaGTCTGCAAAGGTGACTGGGAGGATAGAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SLHSALGSCPWS*SAKVTGRIEKA
Trigger: TGCTTTTTCTATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTGAAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
3UTR CAA 72 bp TGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTaGGACGCAGAGGCTACAGTTCTCACTGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CPAVGPESTLCA*DAEATVLTVWH
Trigger: ATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCTGTCAAGGCAGAGTTTACTaGACTGTTAGTTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VCLGSRREADLVLGCKICQGRVY*TVSFLL
Trigger: CAGGAGGAAACTAACAGTTCAGTAAACTCTGCCTTG...ACAGATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp GTGCCCCTGAATCTGGTTAGGTGGAGTTTACTGCATTTAAAGGCCCATGGTGAGCAGGTCCACTGCCTCTaGGAGGTTGTCCACGTACCC +
Preference number: 4 (lower is better)
Translates to: VPLNLVRWSLLHLKAHGEQVHCL*EVVHVP
Trigger: GGGTACGTGGACAACCTCGCAGAGGCAGTGGACCTG...CTCACCATGGGCCTTTAAATGCAGTAAACTCCACCTAACCAGATTCAGGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp ACTGTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCCAGGTAGGGAACAAATaGCTGCCCATGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TVSFLLHTPGMTPSSLSSQVGNK*LPMQGR
Trigger: TCTGCCCTGCATGGGCAGGCATTTGTTCCCTACCTG...GCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp TGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGATGGATGAGCAGGTATaGTCGCAGGCCTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: WVQKVPCVPWTQRLQFSLMDEQV*SQALLL
Trigger: AAGGAGCAAGGCCTGCGACCATACCTGCTCATCCAT...CAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCAATTACCACACAGTTTaGGTTGGATGTGTCGATCTG +
Preference number: 4 (lower is better)
Translates to: AVCLGSRREADLVLGCKINYHTV*VGCVDL
Trigger: CAGATCGACACATCCAACCCAAACTGTGTGGTAATT...GATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp CCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGGTGAGTTCTGGGATTTaGGAGATTCCCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PESTLCALDAEATVLTVWVSSGI*EIPRGL
Trigger: CAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCAC...CCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTTGCATAGGAGGCCCCTaGGTTTCTTCCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VSFLLHTPGMTPSSLSSSCIGGP*VSSRLF
Trigger: GAAGAGCCTGGAAGAAACCCAGGGGCCTCCTATGCA...ACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGTACCCTGTGTGCCTTaGACGCAGAGGCTACAGTTC +
Preference number: 4 (lower is better)
Translates to: VSFLLHTPGMTPSSLSSSVPCVP*TQRLQF
Trigger: GAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTAC...ACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCATCCAATCATGACGGCCTaGTGGGCTTCCACTCCTATC +
Preference number: 4 (lower is better)
Translates to: ESTLCALDAEATVLTVWHPIMTA*WASTPI
Trigger: GATAGGAGTGGAAGCCCACCAGGCCGTCATGATTGG...ATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS-3UTR TCA 90 bp CCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCTTGCAGGGCAGACTTaGAAAACTCAGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PESTLCALDAEATVLTVWLAGQT*KTQEKA
Trigger: AGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAG...CCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp TGGGCTGCAAGATCTGTGCATAGGAGGCCCCTGGGTTTCTTCCAGGCTCTTCACTTTAAAGGCCCATGGTaGGTGGTGAGTTCTGGGATT +
Preference number: 4 (lower is better)
Translates to: WAARSVHRRPLGFFQALHFKGPW*VVSSGI
Trigger: AATCCCAGAACTCACCACTCACCATGGGCCTTTAAA...GTGAAGAGCCTGGAAGAAACCCAGGGGCCTCCTATGCACAGATCTTGCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp CTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGGCTTTCTCCTGCGTCTaGAATTACCACACAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LHTPGMTPSSLSSSGSRKAFSCV*NYHTVW
Trigger: CCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGC...CTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp ATGGTGAGTGGTGAGTTCTGGGATTTGGGAGATTCCCAGAGGCCTGACAGGCCTACAGTTCTCACTGTGTaGCATGGGAGCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: MVSGEFWDLGDSQRPDRPTVLTV*HGSLHS
Trigger: ACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGT...AGGCCTGTCAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCACCACTCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp GAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGAGTAAGTCTGTCCAGCAGTaGGTCCAGAAAGTACCCTGT +
Preference number: 4 (lower is better)
Translates to: ESEEEAVGIVPLNLVRWSKSVQQ*VQKVPC
Trigger: ACAGGGTACTTTCTGGACCCACTGCTGGACAGACTT...ACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp TCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGAGTTTAATCATGACGGCCTGGTaGGCTTCCACTCCTATCGCT +
Preference number: 4 (lower is better)
Translates to: SEEEAVGIVPLNLVRWSLIMTAW*ASTPIA
Trigger: AGCGATAGGAGTGGAAGCCCACCAGGCCGTCATGAT...TAAACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS-3UTR TCA 90 bp AAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGTTGGATGTGTCGATCTaGTCAAATTCTGAGCGGACT +
Preference number: 4 (lower is better)
Translates to: KSVQQWVQKVPCVPWTQRLDVSI*SNSERT
Trigger: AGTCCGCTCAGAATTTGATCAGATCGACACATCCAA...CCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp AAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTTTTCCCAGTGATATaGGCACAGGTTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KSVQQWVQKVPCVPWTQRLFPVI*AQVFPA
Trigger: AGCTGGAAAAACCTGTGCTCATATCACTGGGAAAAG...CCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGAGTACGCCCTTTTCCCAGTaGTATGAGCACAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ESEEEAVGIVPLNLVRWSTPFSQ*YEHRFF
Trigger: GAAAAACCTGTGCTCATATCACTGGGAAAAGGGCGT...ACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp ACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTTCCACTCCTATCGCTTaGAGGGCAGACTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: TPGMTPSSLSSSGSRKYPSTPIA*RADLKN
Trigger: GTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGA...AGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp TATATTAACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCACGCCAGCCAGCCGCTTaGCCCACGGTGCCATGGCGC +
Preference number: 4 (lower is better)
Translates to: YINTLIGLVNSYPFREAARQPAA*PTVPWR
Trigger: GCGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCG...TGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTTAATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR GCA 90 bp GTGCCCCTGAATCTGGTTAGGTGGAGTTTACTGCATTTAAAGGCCCATGGTGAGCCCCTGGTCTTTGTCTaGAAAGGTGACTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VPLNLVRWSLLHLKAHGEPLVFV*KGDWED
Trigger: ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGG...CTCACCATGGGCCTTTAAATGCAGTAAACTCCACCTAACCAGATTCAGGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp TGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGAGCTCCATGAGCACCTaGAAGGCGTTATTCATGTTT +
Preference number: 4 (lower is better)
Translates to: WVQKVPCVPWTQRLQFSLSSMST*KALFMF
Trigger: AAACATGAATAACGCCTTCCAGGTGCTCATGGAGCT...CAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp GTGCCCCTGAATCTGGTTAGGTGGAGTTTACTGCATTTAAAGGCCCATGGTGAGGAAATGCAAAGAGTCTaGAGAGGAGGCAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VPLNLVRWSLLHLKAHGEEMQRV*RGGSGH
Trigger: ATGCCCACTGCCTCCTCTTCAGACTCTTTGCATTTC...CTCACCATGGGCCTTTAAATGCAGTAAACTCCACCTAACCAGATTCAGGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp ATGGTGAGTGGTGAGTTCTGGGATTTGGGAGATTCCCAGAGGCCTGACAGGCCTAGAAAAGCTTTCTCCTaGGTCTGCAATTACCACACA +
Preference number: 4 (lower is better)
Translates to: MVSGEFWDLGDSQRPDRPRKAFS*VCNYHT
Trigger: TGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTTCT...AGGCCTGTCAGGCCTCTGGGAATCTCCCAAATCCCAGAACTCACCACTCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp ACTGTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGCTCCATGAGCACCTaGAAGGCGTTATTCATGTTT +
Preference number: 4 (lower is better)
Translates to: TVSFLLHTPGMTPSSLSSSSMST*KALFMF
Trigger: AAACATGAATAACGCCTTCCAGGTGCTCATGGAGCT...GCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CCA 90 bp ATTAACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAGATCTGGCAGGCAGCTaGTGCCGGGGCGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: INTLIGLVNSYPFREAAKDLAGS*CRGGHL
Trigger: GAGGTGACCGCCCCGGCACCAGCTGCCTGCCAGATC...TTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp CCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAACTGAATCTGGTTAGGTaGAGTTTACTGCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: PAHTGHDTFKSVQQWVQKLNLVR*SLLHLK
Trigger: CTTTAAATGCAGTAAACTCCACCTAACCAGATTCAG...TTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR TCA 90 bp CACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTCAGGACTCCGTCATGGATaGGCAGGTATGGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: HTDRTCQFLSFQRSSKNSGLRHG*AGMVAG
Trigger: GCCTGCGACCATACCTGCTCATCCATGACGGAGTCC...TGAGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp TATATTAACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAGGGAACGCTTCAGTCTaGCCACCGCCTCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: YINTLIGLVNSYPFREAAGNASV*PPPPPS
Trigger: GCTCGGTGGAGGCGGTGGCCAGACTGAAGCGTTCCC...TGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTTAATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp TATTTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATATGCTCCTTCAGGATCTaGCAGGCAGCTGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: YFLHIVVILLLHCLASEICSFRI*QAAGAG
Trigger: CCCGGCACCAGCTGCCTGCCAGATCCTGAAGGAGCA...TATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp CACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTCAGAGCGGACTCCGTCATaGATGAGCAGGTATGGTCGC +
Preference number: 4 (lower is better)
Translates to: HTDRTCQFLSFQRSSKNSERTPS*MSRYGR
Trigger: GCGACCATACCTGCTCATCCATGACGGAGTCCGCTC...TGAGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR TCA 90 bp TATTTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATATCAAATCCCAGCCTCTaGAGCTGCCCCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: YFLHIVVILLLHCLASEISNPSL*SCPTSS
Trigger: AGAGCTGGTGGGGCAGCTTCAGAGGCTGGGATTTGA...TATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR GCA 90 bp TTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATATATGGGGCGGTCACCTCCTaGTCAGAGATGTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: FLHIVVILLLHCLASEIYGAVTS*SEMSNP
Trigger: GGGATTTGACATCTCTGAGCAGGAGGTGACCGCCCC...ATATATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp TCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGAGTTTACTGAATCTGGTTAGGTaGAGTTTACTGCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: SEEEAVGIVPLNLVRWSLLNLVR*SLLHLK
Trigger: CTTTAAATGCAGTAAACTCCACCTAACCAGATTCAG...TAAACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR GCA 90 bp TATATTAACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCATCTGCCCGGGACTTCTaGGACTCGTTGGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: YINTLIGLVNSYPFREAASARDF*DSLVQN
Trigger: GTTCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGA...TGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTTAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR TCA 90 bp ATTAACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAACCACCACCTCGGCTTTaGTGCCACAGGCATACTCAA +
Preference number: 4 (lower is better)
Translates to: INTLIGLVNSYPFREAAKPPPRL*CHRHTQ
Trigger: TTGAGTATGCCTGTGGCATCAAAGCCGAGGTGGTGG...TTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR TCA 90 bp CACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTCACTTGCAGGGCAGACTTaGAAAACTCAGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: HTDRTCQFLSFQRSSKNSLAGQT*KTQEKA
Trigger: AGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAG...TGAGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR GCA 90 bp CACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTCATCCACTCCTATCGCTTaGAGGGCAGACTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: HTDRTCQFLSFQRSSKNSSTPIA*RADLKN
Trigger: GTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGA...TGAGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp TATATTAACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAATGGATGAGCAGGTATaGTCGCAGGCCTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: YINTLIGLVNSYPFREAAMDEQV*SQALLL
Trigger: AAGGAGCAAGGCCTGCGACCATACCTGCTCATCCAT...TGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTTAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR TCA 90 bp CACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTCATTGGATGTGTCGATCTaGTCAAATTCTGAGCGGACT +
Preference number: 4 (lower is better)
Translates to: HTDRTCQFLSFQRSSKNSLDVSI*SNSERT
Trigger: AGTCCGCTCAGAATTTGATCAGATCGACACATCCAA...TGAGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR TCA 90 bp TATTTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATAACGCCCTTTTCCCAGTaGTATGAGCACAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: YFLHIVVILLLHCLASEITPFSQ*YEHRFF
Trigger: GAAAAACCTGTGCTCATATCACTGGGAAAAGGGCGT...TATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR GCA 90 bp TATTTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATAGCTTTCTCCTGCGTCTaGAATTACCACACAGTTTGG +
Preference number: 4 (lower is better)
Translates to: YFLHIVVILLLHCLASEIAFSCV*NYHTVW
Trigger: CCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGC...TATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR TCA 90 bp ATTAACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAGATCTGATCAAATTCTaGGCGGACTCCGTCATGGAT +
Preference number: 4 (lower is better)
Translates to: INTLIGLVNSYPFREAAKDLIKF*ADSVMD
Trigger: ATCCATGACGGAGTCCGCTCAGAATTTGATCAGATC...TTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR TCA 90 bp TATTTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATACTTTTCCCAGTGATATaGGCACAGGTTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YFLHIVVILLLHCLASEILFPVI*AQVFPA
Trigger: AGCTGGAAAAACCTGTGCTCATATCACTGGGAAAAG...TATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp CACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTCAAATTACCACACAGTTTaGGTTGGATGTGTCGATCTG +
Preference number: 4 (lower is better)
Translates to: HTDRTCQFLSFQRSSKNSNYHTV*VGCVDL
Trigger: CAGATCGACACATCCAACCCAAACTGTGTGGTAATT...TGAGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp AACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTAGCTCCATGAGCACCTaGAAGGCGTTATTCATGTTT +
Preference number: 4 (lower is better)
Translates to: NTLIGLVNSYPFREAAKTSSMST*KALFMF
Trigger: AAACATGAATAACGCCTTCCAGGTGCTCATGGAGCT...AGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp TATATTAACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAACTGAAAGTAACTGGTaGGCTTCCACTCCTATCGCT +
Preference number: 4 (lower is better)
Translates to: YINTLIGLVNSYPFREAATESNW*ASTPIA
Trigger: AGCGATAGGAGTGGAAGCCCACCAGTTACTTTCAGT...TGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTTAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR GCA 90 bp TTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATATATAGAAAAGCTTTCTCCTaGGTCTGCAATTACCACACA +
Preference number: 4 (lower is better)
Translates to: FLHIVVILLLHCLASEIYRKAFS*VCNYHT
Trigger: TGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTTCT...ATATATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CCA 90 bp TATATTAACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCACATACTGAAAGTAACTaGTGGGCTTCCACTCCTATC +
Preference number: 4 (lower is better)
Translates to: YINTLIGLVNSYPFREAAHTESN*WASTPI
Trigger: GATAGGAGTGGAAGCCCACCAGTTACTTTCAGTATG...TGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTTAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS GCA 90 bp CGCCCGAGATGTCAAGCAGCACCCCGCGCACGCCAGCCAGCCGCTTaGCCCACGGTGCCATGGCGCCCGGCCCTGCTCCTCAGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: RPRCQAAPRARQPAA*PTVPWRPALLLSSA
Trigger: CGCGGAGCTGAGGAGCAGGGCCGGGCGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCGTGCGCGGGGTGCTGCTTGACATCTCGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368842.10
ENST00000392757.8
CDS CCA 90 bp GCCGGGAACGCTTCAGTCTGGCCACCGCCTCCACCGAGCCGGCGATaGCCGTGCCGCCGCCCGCGCCGCTGTCGTACAGCACGCCCGAGA +
Preference number: 5 (lower is better)
Translates to: AGNASVWPPPPPSRR*PCRRPRRCRTARPR
Trigger: TCTCGGGCGTGCTGTACGACAGCGGCGCGGGCGGCGGCACGGCCATCGCCGGCTCGGTGGAGGCGGTGGCCAGACTGAAGCGTTCCCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS GCA 90 bp GTCAAGCAGCACCCCGCGCACGCCAGCCAGCCGCTTGCCCCACGGTaGCATGGCGCCCGGCCCTGCTCCTCAGCTCCGCGTCCCAACCGA +
Preference number: 5 (lower is better)
Translates to: VKQHPAHASQPLAPR*HGARPCSSAPRPNR
Trigger: TCGGTTGGGACGCGGAGCTGAGGAGCAGGGCCGGGCGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCGTGCGCGGGGTGCTGCTTGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS GCA 90 bp CCCGAACTCCAGCCCCGCATGCGGCCGGCGGTTCCACACCGTCTCTaGCAGGGCCCGGGCCCCCTCCACATGCTGGAAGTGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PELQPRMRPAVPHRL*QGPGPLHMLEVARL
Trigger: CAGCCTGGCCACTTCCAGCATGTGGAGGGGGCCCGGGCCCTGGCAGAGACGGTGTGGAACCGCCGGCCGCATGCGGGGCTGGAGTTCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 90 bp AACGCTTCAGTCTGGCCACCGCCTCCACCGAGCCGGCGATGGCCGTaGCGCCGCCCGCGCCGCTGTCGTACAGCACGCCCGAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: NASVWPPPPPSRRWP*RRPRRCRTARPRCQ
Trigger: TTGACATCTCGGGCGTGCTGTACGACAGCGGCGCGGGCGGCGGCACGGCCATCGCCGGCTCGGTGGAGGCGGTGGCCAGACTGAAGCGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS TCA 90 bp CCACACTCGCCCGTCCCGCCCTGTGTCCCCACCTCTGCCCTGAGGTaGACACAGGAGGCTTTCCACCTGCCAGCTGCCAGCCAACCTCCC +
Preference number: 5 (lower is better)
Translates to: PHSPVPPCVPTSALR*TQEAFHLPAASQPP
Trigger: GGGAGGTTGGCTGGCAGCTGGCAGGTGGAAAGCCTCCTGTGTTCACCTCAGGGCAGAGGTGGGGACACAGGGCGGGACGGGCGAGTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS TCA 90 bp GGGCACCACACTCGCCCGTCCCGCCCTGTGTCCCCACCTCTGCCCTaGGGTGAACACAGGAGGCTTTCCACCTGCCAGCTGCCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: GHHTRPSRPVSPPLP*GEHRRLSTCQLPAN
Trigger: GTTGGCTGGCAGCTGGCAGGTGGAAAGCCTCCTGTGTTCACCTCAGGGCAGAGGTGGGGACACAGGGCGGGACGGGCGAGTGTGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 90 bp CAGAGGGGCACCACACTCGCCCGTCCCGCCCTGTGTCCCCACCTCTaGCCTGAGGTGAACACAGGAGGCTTTCCACCTGCCAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QRGTTLARPALCPHL*PEVNTGGFPPASCQ
Trigger: CTGGCAGCTGGCAGGTGGAAAGCCTCCTGTGTTCACCTCAGGGCAGAGGTGGGGACACAGGGCGGGACGGGCGAGTGTGGTGCCCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 90 bp CACACCGTCTCTGCCAGGGCCCGGGCCCCCTCCACATGCTGGAAGTaGCCAGGCTGCCGGAAGGAGCCAGGGGTGAAGGAGGTCATTCCT +
Preference number: 5 (lower is better)
Translates to: HTVSARARAPSTCWK*PGCRKEPGVKEVIP
Trigger: AGGAATGACCTCCTTCACCCCTGGCTCCTTCCGGCAGCCTGGCCACTTCCAGCATGTGGAGGGGGCCCGGGCCCTGGCAGAGACGGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 90 bp GGAGCAGGCAGGGGGACGTCGGTGGCTGGGGGACATCCCGCCACCTaGCAAGTAGCTGCAATGGGAAGAGATGCGGTTCCCGTGACAGCC +
Preference number: 5 (lower is better)
Translates to: GAGRGTSVAGGHPAT*QVAAMGRDAVPVTA
Trigger: GGCTGTCACGGGAACCGCATCTCTTCCCATTGCAGCTACTTGGCAGGTGGCGGGATGTCCCCCAGCCACCGACGTCCCCCTGCCTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 90 bp CCAGCAGCCAGGGATGGTCTTGGAGAGGCGGGCGATTCTTGGGTCTaGGGCGCACCCCTTCCACCCCACCTGCAGGCGACTCTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: PAARDGLGEAGDSWV*GAPLPPHLQATLPQ
Trigger: TTGAGGCAGAGTCGCCTGCAGGTGGGGTGGAAGGGGTGCGCCCCAGACCCAAGAATCGCCCGCCTCTCCAAGACCATCCCTGGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482963.1
ENST00000493240.1
CDS-3UTR CAA 90 bp CCTGACAGGCCTGTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGACGCCAGCCAGCCGCTaGCCCCACGGTGCCATGGCG +
Preference number: 5 (lower is better)
Translates to: PDRPVPPSWTSLQGAEVRTPASR*PHGAMA
Trigger: CGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCGT...CCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGACAGGCCTGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS GCA 90 bp GGGGACGTCGGTGGCTGGGGGACATCCCGCCACCTGCCAAGTAGCTaGAATGGGAAGAGATGCGGTTCCCGTGACAGCCAGGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: GDVGGWGTSRHLPSS*NGKRCGSRDSQAWM
Trigger: CATCCAGGCCTGGCTGTCACGGGAACCGCATCTCTTCCCATTGCAGCTACTTGGCAGGTGGCGGGATGTCCCCCAGCCACCGACGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 90 bp GAAGCTGCCCCACCAGCTCTGCCCGGGACTTCTGCGACTCGTTGGTaGAGAACCTCACCTTCAGCCGGGAACGCTTCAGTCTGGCCACCG +
Preference number: 5 (lower is better)
Translates to: EAAPPALPGTSATRW*RTSPSAGNASVWPP
Trigger: CGGTGGCCAGACTGAAGCGTTCCCGGCTGAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGAGCTGGTGGGGCAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS CCA 90 bp CTGAACTTCCCGGTGCGCACCTGCAGCGCTCTCATTCCACACCGCTaGGCACCGCCGACGTCGCCCACGATATCGTCCCCAATCATGACG +
Preference number: 5 (lower is better)
Translates to: LNFPVRTCSALIPHR*APPTSPTISSPIMT
Trigger: CGTCATGATTGGGGACGATATCGTGGGCGACGTCGGCGGTGCCCAGCGGTGTGGAATGAGAGCGCTGCAGGTGCGCACCGGGAAGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368842.10
ENST00000481452.1
CDS CCA 90 bp CACGACAGTTCCGCGACATGTGTTGAACACAGGGCCTTAGCCCATTaGCAGCCCCGAACTCCAGCCCCGCATGCGGCCGGCGGTTCCACA +
Preference number: 5 (lower is better)
Translates to: HDSSATCVEHRALAH*QPRTPAPHAAGGST
Trigger: TGTGGAACCGCCGGCCGCATGCGGGGCTGGAGTTCGGGGCTGCCAATGGGCTAAGGCCCTGTGTTCAACACATGTCGCGGAACTGTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 90 bp GGCCCAGTTCCCAGCCTTGTCGGCAGTGAGGACATGGACCCTCGCTaGCATCCGTCCTCCGTCTGGCACAACGTGCCGTGTTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: GPVPSLVGSEDMDPR*HPSSVWHNVPCSLW
Trigger: CCAGAGAGAACACGGCACGTTGTGCCAGACGGAGGACGGATGCCAGCGAGGGTCCATGTCCTCACTGCCGACAAGGCTGGGAACTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS TCA 90 bp CCTCCACATGCTGGAAGTGGCCAGGCTGCCGGAAGGAGCCAGGGGTaGAGGAGGTCATTCCTCACTTCTAGGCAACACCGACCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PPHAGSGQAAGRSQG*RRSFLTSRQHRPPG
Trigger: GCCTGGGGGTCGGTGTTGCCTAGAAGTGAGGAATGACCTCCTTCACCCCTGGCTCCTTCCGGCAGCCTGGCCACTTCCAGCATGTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS TCA 90 bp GGAGGCCTCTGCTTCACTTGGCCCAGTTCCCAGCCTTGTCGGCAGTaGGGACATGGACCCTCGCTGGCATCCGTCCTCCGTCTGGCACAA +
Preference number: 5 (lower is better)
Translates to: GGLCFTWPSSQPCRQ*GHGPSLASVLRLAQ
Trigger: TTGTGCCAGACGGAGGACGGATGCCAGCGAGGGTCCATGTCCTCACTGCCGACAAGGCTGGGAACTGGGCCAAGTGAAGCAGAGGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 90 bp TCCGATCCTCTGGAGGGCTCAAGCCGAACGGAAGGAGGGAAGAACTaGAGTCACCTGGGCCGGTGGCGCTCACATCTGACGTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SDPLEGSSRTEGGKN*SHLGRWRSHLTWRP
Trigger: AGGCCTCCACGTCAGATGTGAGCGCCACCGGCCCAGGTGACTGCAGTTCTTCCCTCCTTCCGTTCGGCTTGAGCCCTCCAGAGGATCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 90 bp CGCTGGCATCCGTCCTCCGTCTGGCACAACGTGCCGTGTTCTCTCTaGTTAGGGTTTGGGTGGGACGGAGACTGCGCCCCTGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: RWHPSSVWHNVPCSL*LGFGWDGDCAPVPG
Trigger: ACCAGGAACAGGGGCGCAGTCTCCGTCCCACCCAAACCCTAACCAGAGAGAACACGGCACGTTGTGCCAGACGGAGGACGGATGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 90 bp CTGCTTCACTTGGCCCAGTTCCCAGCCTTGTCGGCAGTGAGGACATaGACCCTCGCTGGCATCCGTCCTCCGTCTGGCACAACGTGCCGT +
Preference number: 5 (lower is better)
Translates to: LLHLAQFPALSAVRT*TLAGIRPPSGTTCR
Trigger: ACGGCACGTTGTGCCAGACGGAGGACGGATGCCAGCGAGGGTCCATGTCCTCACTGCCGACAAGGCTGGGAACTGGGCCAAGTGAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 90 bp GGGAAGAACTGCAGTCACCTGGGCCGGTGGCGCTCACATCTGACGTaGAGGCCTCTGCTTCACTTGGCCCAGTTCCCAGCCTTGTCGGCA +
Preference number: 5 (lower is better)
Translates to: GKNCSHLGRWRSHLT*RPLLHLAQFPALSA
Trigger: TGCCGACAAGGCTGGGAACTGGGCCAAGTGAAGCAGAGGCCTCCACGTCAGATGTGAGCGCCACCGGCCCAGGTGACTGCAGTTCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 90 bp CCCAGGACAGCGGCACCAGGTCAGGCCTCAGCCTTTCCGATCCTCTaGAGGGCTCAAGCCGAACGGAAGGAGGGAAGAACTGCAGTCACC +
Preference number: 5 (lower is better)
Translates to: PRTAAPGQASAFPIL*RAQAERKEGRTAVT
Trigger: GGTGACTGCAGTTCTTCCCTCCTTCCGTTCGGCTTGAGCCCTCCAGAGGATCGGAAAGGCTGAGGCCTGACCTGGTGCCGCTGTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS-3UTR CAA 90 bp GAGTCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGAGTACGCCAGCCAGCCGCTaGCCCCACGGTGCCATGGCG +
Preference number: 5 (lower is better)
Translates to: ESEEEAVGIVPLNLVRWSTPASR*PHGAMA
Trigger: CGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCGT...ACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp GCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGGGCTGTCAGGGCCTaGGTTGGTCTGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: AEATVLTVWHGSLHSALGRAVRA*VGLGTG
Trigger: CCCAGTGCCCAGACCAACCAAGGCCCTGACAGCCCT...CCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp TCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGGCGCAGGGAGGCTGACTaGGTTCTGGGCTGCAAGATC +
Preference number: 5 (lower is better)
Translates to: SHPPGLHYRELKSGPRQGRREAD*VLGCKI
Trigger: GATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCG...CCCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS CCA 90 bp TCTGAAGCTGCCCCACCAGCTCTGCCCGGGACTTCTGCGACTCGTTaGTGCAGAACCTCACCTTCAGCCGGGAACGCTTCAGTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: SEAAPPALPGTSATR*CRTSPSAGNASVWP
Trigger: TGGCCAGACTGAAGCGTTCCCGGCTGAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGAGCTGGTGGGGCAGCTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS CCA 90 bp TCATGGATGAGCAGGTATGGTCGCAGGCCTTGCTCCTTCAGGATCTaGCAGGCAGCTGGTGCCGGGGCGGTCACCTCCTGCTCAGAGATG +
Preference number: 5 (lower is better)
Translates to: SWMSRYGRRPCSFRI*QAAGAGAVTSCSEM
Trigger: CATCTCTGAGCAGGAGGTGACCGCCCCGGCACCAGCTGCCTGCCAGATCCTGAAGGAGCAAGGCCTGCGACCATACCTGCTCATCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS CCA 90 bp GTCGGCAGTGAGGACATGGACCCTCGCTGGCATCCGTCCTCCGTCTaGCACAACGTGCCGTGTTCTCTCTGGTTAGGGTTTGGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: VGSEDMDPRWHPSSV*HNVPCSLWLGFGWD
Trigger: GTCCCACCCAAACCCTAACCAGAGAGAACACGGCACGTTGTGCCAGACGGAGGACGGATGCCAGCGAGGGTCCATGTCCTCACTGCCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 90 bp TCAAGCCGAACGGAAGGAGGGAAGAACTGCAGTCACCTGGGCCGGTaGCGCTCACATCTGACGTGGAGGCCTCTGCTTCACTTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSRTEGGKNCSHLGR*RSHLTWRPLLHLAQ
Trigger: CTGGGCCAAGTGAAGCAGAGGCCTCCACGTCAGATGTGAGCGCCACCGGCCCAGGTGACTGCAGTTCTTCCCTCCTTCCGTTCGGCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS-3UTR CAA 90 bp TGCCTCTGCGAGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTGCTCAGGGCTGTCAGGGCCTaGGTTGGTCTGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: CLCEVVHVPISLHFRMVLRAVRA*VGLGTG
Trigger: CCCAGTGCCCAGACCAACCAAGGCCCTGACAGCCCT...GAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCTCGCAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS-3UTR CAA 90 bp GTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTAGCAGCGGGCTGGCATaGTTTCGGGGGTGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: VCPAVGPESTLCALDAEASSGLA*FRGWGG
Trigger: ACCACCCCACCCCCGAAACAATGCCAGCCCGCTGCT...AGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS TCA 90 bp CACCTGCAGGCGACTCTGCCTCAAAGAGCTTGTGCCCCTGCTGTGTaGAGGGGTCTTGTGCGCTTTGGCAAGGGCCTTCCCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HLQATLPQRACAPAV*RGLVRFGKGLPTSL
Trigger: CAAGCTGGTGGGAAGGCCCTTGCCAAAGCGCACAAGACCCCTTCACACAGCAGGGGCACAAGCTCTTTGAGGCAGAGTCGCCTGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482963.1
ENST00000493240.1
CDS TCA 90 bp AAGGAGGGAAGAACTGCAGTCACCTGGGCCGGTGGCGCTCACATCTaGCGTGGAGGCCTCTGCTTCACTTGGCCCAGTTCCCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: KEGRTAVTWAGGAHI*RGGLCFTWPSSQPC
Trigger: ACAAGGCTGGGAACTGGGCCAAGTGAAGCAGAGGCCTCCACGTCAGATGTGAGCGCCACCGGCCCAGGTGACTGCAGTTCTTCCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 90 bp CTCTGCCTCAAAGAGCTTGTGCCCCTGCTGTGTGAAGGGGTCTTGTaGGCTTTGGCAAGGGCCTTCCCACCAGCTTGGCAGAGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LCLKELVPLLCEGVL*ALARAFPPAWQREG
Trigger: TCCCTCCCTCTGCCAAGCTGGTGGGAAGGCCCTTGCCAAAGCGCACAAGACCCCTTCACACAGCAGGGGCACAAGCTCTTTGAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493240.1
CDS CCA 90 bp GCCTCTGCGAGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATaGTGCTCGTCACTGGGCCTGTCCCCATCTCCCACTGTATGCTCC +
Preference number: 5 (lower is better)
Translates to: ASARLSTYPSAFTSG*CSSLGLSPSPTVCS
Trigger: GGAGCATACAGTGGGAGATGGGGACAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCTCGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS CCA 90 bp TCCGTCTGGCACAACGTGCCGTGTTCTCTCTGGTTAGGGTTTGGGTaGGACGGAGACTGCGCCCCTGTTCCTGGTCCGCCTAAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SVWHNVPCSLWLGFG*DGDCAPVPGPPKSL
Trigger: CAGAGACTTAGGCGGACCAGGAACAGGGGCGCAGTCTCCGTCCCACCCAAACCCTAACCAGAGAGAACACGGCACGTTGTGCCAGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS-3UTR CAA 90 bp GCAGTGTGCCTGGGCAGTCGCAGGGAGGCTGACTTGGTTCTGGGCTGCAAGATCCCCACCACCTCGGCTTaGATGCCACAGGCATACTCA +
Preference number: 5 (lower is better)
Translates to: AVCLGSRREADLVLGCKIPTTSA*MPQAYS
Trigger: TGAGTATGCCTGTGGCATCAAAGCCGAGGTGGTGGG...GATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCGACTGCCCAGGCACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp CCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAACCAGGAGGCCATCACTaGTCGGCGTGCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PAHTGHDTFKSVQQWVQKPGGHH*SACCSS
Trigger: GCTGCTGCAGCACGCCGACAAGTGATGGCCTCCTGG...TTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS CCA 90 bp TGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTGCTCGTCACTaGGCCTGTCCCCATCTCCCACTGTATGCTCCTTCCACAGGGCGA +
Preference number: 5 (lower is better)
Translates to: CPRTHQPSLPDGARH*ACPHLPLYAPSTGR
Trigger: TCGCCCTGTGGAAGGAGCATACAGTGGGAGATGGGGACAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS-3UTR CAA 90 bp CAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGATGTATGGTCGCAGGCCTaGCTCCTTCAGGATCTGGCA +
Preference number: 5 (lower is better)
Translates to: QCPRELPLVFVCKGDWEDVWSQA*LLQDLA
Trigger: TGCCAGATCCTGAAGGAGCAAGGCCTGCGACCATAC...ATCCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS TCA 90 bp AATGTAGGCTGCCCCGTGTGTTCACCTCCTAAACCAGGACAGTTCTaGGGGGCAGCTGGAACTGTTGACACGCACTCTGGCACGGGAGGC +
Preference number: 5 (lower is better)
Translates to: NVGCPVCSPPKPGQF*GAAGTVDTHSGTGG
Trigger: GCCTCCCGTGCCAGAGTGCGTGTCAACAGTTCCAGCTGCCCCTCAGAACTGTCCTGGTTTAGGAGGTGAACACACGGGGCAGCCTACATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 90 bp GATGGTGCTCGTCACTGGGCCTGGTGGGCTTCCACTCCTATCGCTTaGAGGGCAGACTTGAAAAACTCAGGAGAAGGCTTCCCCACCACC +
Preference number: 5 (lower is better)
Translates to: DGARHWAWWASTPIA*RADLKNSGEGFPTT
Trigger: GGTGGTGGGGAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGGCCCAGTGACGAGCACCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS GCA 90 bp TCTGCGAGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTaGTCGTCACTGGGCCTGTCCCCATCTCCCACTGTATGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SARLSTYPSAFTSGW*SSLGLSPSPTVCSF
Trigger: GAAGGAGCATACAGTGGGAGATGGGGACAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCTCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS-3UTR CAA 90 bp GTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTCCCACCACCTCGGCTTaGATGCCACAGGCATACTCA +
Preference number: 5 (lower is better)
Translates to: VCPAVGPESTLCALDAEAPTTSA*MPQAYS
Trigger: TGAGTATGCCTGTGGCATCAAAGCCGAGGTGGTGGG...AGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp AAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGACTGCCTCTGCGAGGTaGTCCACGTACCCATCAGCC +
Preference number: 5 (lower is better)
Translates to: KSVQQWVQKVPCVPWTQRTASAR*STYPSA
Trigger: GGCTGATGGGTACGTGGACAACCTCGCAGAGGCAGT...CCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp CTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGACTGCCTCTGCGAGGTaGTCCACGTACCCATCAGCC +
Preference number: 5 (lower is better)
Translates to: LHTPGMTPSSLSSSGSRKTASAR*STYPSA
Trigger: GGCTGATGGGTACGTGGACAACCTCGCAGAGGCAGT...CTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp TTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCGCAGGGAGGCTGACTaGGTTCTGGGCTGCAAGATC +
Preference number: 5 (lower is better)
Translates to: FPPAHTGHDTFKSVQQWVRREAD*VLGCKI
Trigger: GATCTTGCAGCCCAGAACCAAGTCAGCCTCCCTGCG...GACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp GCAGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGTACCCTGTGTGCCTaGGACGCAGAGGCTACAGTT +
Preference number: 5 (lower is better)
Translates to: AEATVLTVWHGSLHSALGSTLCA*DAEATV
Trigger: AACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACT...CCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp GTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTGACTTCTGCGACTCGTaGGTGCAGAACCTCACCTTC +
Preference number: 5 (lower is better)
Translates to: VCPAVGPESTLCALDAEADFCDS*VQNLTF
Trigger: GAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGTC...AGCCTCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp GTCCCACCCTCCTGGACTTCACTACAGGGAGCTGAAGTCAGGGCCCAGGCAGGGTTCCACTCCTATCGCTaGCAGGGCAGACTTGAAAAA +
Preference number: 5 (lower is better)
Translates to: VPPSWTSLQGAEVRAQAGFHSYR*QGRLEK
Trigger: TTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAA...CCCTGCCTGGGCCCTGACTTCAGCTCCCTGTAGTGAAGTCCAGGAGGGTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp TCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAAGCTGCCCCTGGTCTTaGTCTGCAAAGGTGACTGGG +
Preference number: 5 (lower is better)
Translates to: SSLSSSGSRKYPVCLGRRSCPWS*SAKVTG
Trigger: CCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCT...TCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS TCA 90 bp TCTCCCACTGTATGCTCCTTCCACAGGGCGAGTTGCTCTCTCTTCTaGGCATGCAGAATGTGCCCTCCAACCACCCCATGCCATCAAAGC +
Preference number: 5 (lower is better)
Translates to: SPTVCSFHRASCSLF*ACRMCPPTTPCHQS
Trigger: GCTTTGATGGCATGGGGTGGTTGGAGGGCACATTCTGCATGCTCAGAAGAGAGAGCAACTCGCCCTGTGGAAGGAGCATACAGTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS-3UTR CAA 90 bp ACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGACTTCTGCGACTCGTaGGTGCAGAACCTCACCTTC +
Preference number: 5 (lower is better)
Translates to: TPGMTPSSLSSSGSRKYPDFCDS*VQNLTF
Trigger: GAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGTC...AGGGTACTTTCTGGACCCACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp CACAGTGCCCTCGGGAGCTGCCCCTGGTCTTTGTCTGCAAAGGTGACTGGGAGGCAATTACCACACAGTTaGGGTTGGATGTGTCGATCT +
Preference number: 5 (lower is better)
Translates to: HSALGSCPWSLSAKVTGRQLPHS*GWMCRS
Trigger: AGATCGACACATCCAACCCAAACTGTGTGGTAATTG...CCTCCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCTCCCGAGGGCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp GAAAGTACCCTGTGTGCCTTGGACGCAGAGGCTACAGTTCTCACTGTGTGGCATAGCTGCCCCTGGTCTTaGTCTGCAAAGGTGACTGGG +
Preference number: 5 (lower is better)
Translates to: ESTLCALDAEATVLTVWHSCPWS*SAKVTG
Trigger: CCCAGTCACCTTTGCAGACAAAGACCAGGGGCAGCT...ATGCCACACAGTGAGAACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp TCAAGTCTGTCCAGCAGTGGGTCCAGAAAGTACCCTGTGTGCCTTGGACGCAGAAGTACCCTGTGTGCCTaGGACGCAGAGGCTACAGTT +
Preference number: 5 (lower is better)
Translates to: SSLSSSGSRKYPVCLGRRSTLCA*DAEATV
Trigger: AACTGTAGCCTCTGCGTCCAAGGCACACAGGGTACT...TCTGCGTCCAAGGCACACAGGGTACTTTCTGGACCCACTGCTGGACAGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp TCTGAAGAGGAGGCAGTGGGCATAGTGCCCCTGAATCTGGTTAGGTGGAGTTTAGTATGGTCGCAGGCCTaGCTCCTTCAGGATCTGGCA +
Preference number: 5 (lower is better)
Translates to: SEEEAVGIVPLNLVRWSLVWSQA*LLQDLA
Trigger: TGCCAGATCCTGAAGGAGCAAGGCCTGCGACCATAC...TAAACTCCACCTAACCAGATTCAGGGGCACTATGCCCACTGCCTCCTCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp GTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCAGTGGTGAGTTCTGGGATTaGGGAGATTCCCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: VSFLLHTPGMTPSSLSSSGEFWD*GDSQRP
Trigger: AGGCCTCTGGGAATCTCCCAAATCCCAGAACTCACC...ACTGCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp ACTGTTAGTTTCCTCCTGCACACACCGGGCATGACACCTTCAAGTCTGTCCAGCGGTGAGTTCTGGGATTaGGGAGATTCCCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: TVSFLLHTPGMTPSSLSSGEFWD*GDSQRP
Trigger: AGGCCTCTGGGAATCTCCCAAATCCCAGAACTCACC...GCTGGACAGACTTGAAGGTGTCATGCCCGGTGTGTGCAGGAGGAAACTAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp AGAGGCTACAGTTCTCACTGTGTGGCATGGGAGCCTTCACAGTGCCCTCGGGAGCAATTACCACACAGTTaGGGTTGGATGTGTCGATCT +
Preference number: 5 (lower is better)
Translates to: RGYSSHCVAWEPSQCPREQLPHS*GWMCRS
Trigger: AGATCGACACATCCAACCCAAACTGTGTGGTAATTG...CTCCCGAGGGCACTGTGAAGGCTCCCATGCCACACAGTGAGAACTGTAGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS-3UTR CAA 90 bp TATTTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATAACGCCAGCCAGCCGCTaGCCCCACGGTGCCATGGCG +
Preference number: 5 (lower is better)
Translates to: YFLHIVVILLLHCLASEITPASR*PHGAMA
Trigger: CGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCGT...TATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS GCA 90 bp TGCTTTCATACTGAAAGTAACTGGTGGGCTTCCACTCCTATCGCTTaGAGGGCAGACTTGAAAAACTCAGGAGAAGGCTTCCCCACCACC +
Preference number: 5 (lower is better)
Translates to: CFHTESNWWASTPIA*RADLKNSGEGFPTT
Trigger: GGTGGTGGGGAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGTTACTTTCAGTATGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS CCA 90 bp AGTAGCTGCAATGGGAAGAGATGCGGTTCCCGTGACAGCCAGGCCTaGATGTTCAAGTCATGTGAGACCACCAAATACCTTGTTGCACTA +
Preference number: 5 (lower is better)
Translates to: SSCNGKRCGSRDSQA*MFKSCETTKYLVAL
Trigger: TAGTGCAACAAGGTATTTGGTGGTCTCACATGACTTGAACATCCAGGCCTGGCTGTCACGGGAACCGCATCTCTTCCCATTGCAGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS TCA 90 bp CCTGCGTCTGCAATTACCACACAGTTTGGGTTGGATGTGTCGATCTaGTCAAATTCTGAGCGGACTCCGTCATGGATGAGCAGGTATGGT +
Preference number: 5 (lower is better)
Translates to: PASAITTQFGLDVSI*SNSERTPSWMSRYG
Trigger: ACCATACCTGCTCATCCATGACGGAGTCCGCTCAGAATTTGATCAGATCGACACATCCAACCCAAACTGTGTGGTAATTGCAGACGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS-3UTR CAA 90 bp GTGCCCCTGAATCTGGTTAGGTGGAGTTTACTGCATTTAAAGGCCCATGGTGAGTTCCACTCCTATCGCTaGCAGGGCAGACTTGAAAAA +
Preference number: 5 (lower is better)
Translates to: VPLNLVRWSLLHLKAHGEFHSYR*QGRLEK
Trigger: TTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAA...CTCACCATGGGCCTTTAAATGCAGTAAACTCCACCTAACCAGATTCAGGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368839.1
ENST00000368842.10
CDS CCA 90 bp AAGAAAAGCTTTCTCCTGCGTCTGCAATTACCACACAGTTTGGGTTaGATGTGTCGATCTGATCAAATTCTGAGCGGACTCCGTCATGGA +
Preference number: 5 (lower is better)
Translates to: KKSFLLRLQLPHSLG*MCRSDQILSGLRHG
Trigger: TCCATGACGGAGTCCGCTCAGAATTTGATCAGATCGACACATCCAACCCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS-3UTR CAA 90 bp AACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTGTATGGTCGCAGGCCTaGCTCCTTCAGGATCTGGCA +
Preference number: 5 (lower is better)
Translates to: NTLIGLVNSYPFREAAKTVWSQA*LLQDLA
Trigger: TGCCAGATCCTGAAGGAGCAAGGCCTGCGACCATAC...AGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CAA 90 bp TTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATATATCCCACCACCTCGGCTTaGATGCCACAGGCATACTCA +
Preference number: 5 (lower is better)
Translates to: FLHIVVILLLHCLASEIYPTTSA*MPQAYS
Trigger: TGAGTATGCCTGTGGCATCAAAGCCGAGGTGGTGGG...ATATATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS GCA 90 bp CACCTGGAAGGCGTTATTCATGTTTTGATAAGAAAAGCTTTCTCCTaGGTCTGCAATTACCACACAGTTTGGGTTGGATGTGTCGATCTG +
Preference number: 5 (lower is better)
Translates to: HLEGVIHVLIRKAFS*VCNYHTVWVGCVDL
Trigger: CAGATCGACACATCCAACCCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTTCTTATCAAAACATGAATAACGCCTTCCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
ENST00000487190.1
CDS GCA 90 bp GAAGGCGTTATTCATGTTTTGATAAGAAAAGCTTTCTCCTGCGTCTaGAATTACCACACAGTTTGGGTTGGATGTGTCGATCTGATCAAA +
Preference number: 5 (lower is better)
Translates to: EGVIHVLIRKAFSCV*NYHTVWVGCVDLIK
Trigger: TTTGATCAGATCGACACATCCAACCCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTTCTTATCAAAACATGAATAACGCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
ENST00000487190.1
CDS-3UTR CAA 90 bp AACACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTTTCCACTCCTATCGCTaGCAGGGCAGACTTGAAAAA +
Preference number: 5 (lower is better)
Translates to: NTLIGLVNSYPFREAAKTFHSYR*QGRLEK
Trigger: TTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAA...AGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CAA 90 bp TTCCTCCATATTGTTGTAATCTTGCTGTTACACTGTCTTGCCAGTGAGATATATCAATTACCACACAGTTaGGGTTGGATGTGTCGATCT +
Preference number: 5 (lower is better)
Translates to: FLHIVVILLLHCLASEIYQLPHS*GWMCRS
Trigger: AGATCGACACATCCAACCCAAACTGTGTGGTAATTG...ATATATCTCACTGGCAAGACAGTGTAACAGCAAGATTACAACAATATGGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CAA 90 bp CACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTCATGCTGTTACACTGTCTaGCCAGTGAGATATATTAAC +
Preference number: 5 (lower is better)
Translates to: HTDRTCQFLSFQRSSKNSCCYTV*PVRYIN
Trigger: GTTAATATATCTCACTGGCAAGACAGTGTAACAGCA...TGAGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS-3UTR CAA 90 bp CACACTGATAGGACTTGTCAATTCTTATCCTTTCAGAGAAGCAGCAAAAACTCACATATTGTTGTAATCTaGCTGTTACACTGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: HTDRTCQFLSFQRSSKNSHIVVI*LLHCLA
Trigger: GGCAAGACAGTGTAACAGCAAGATTACAACAATATG...TGAGTTTTTGCTGCTTCTCTGAAAGGATAAGAATTGACAAGTCCTATCAGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS GCA 72 bp GTCTGGCCACCGCCTCCACCGAGCCGGCGATGGCCGTaGCGCCGCCCGCGCCGCTGTCGTACAGCACGCCCG +
Preference number: 6 (lower is better)
Translates to: VWPPPPPSRRWP*RRPRRCRTARP
Trigger: CGGGCGTGCTGTACGACAGCGGCGCGGGCGGCGGCACGGCCATCGCCGGCTCGGTGGAGGCGGTGGCCAGAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS CCA 72 bp CGCGCACGCCAGCCAGCCGCTTGCCCCACGGTGCCATaGCGCCCGGCCCTGCTCCTCAGCTCCGCGTCCCAA +
Preference number: 6 (lower is better)
Translates to: RARQPAACPTVP*RPALLLSSASQ
Trigger: TTGGGACGCGGAGCTGAGGAGCAGGGCCGGGCGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCGTGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS CAA 90 bp ACGCCCGAGATGTCAAGCAGCACCCCGCGCACGCCAGCCAGCCGCTaGCCCCACGGTGCCATGGCGCCCGGCCCTGCTCCTCAGCTCCGC +
Preference number: 6 (lower is better)
Translates to: TPEMSSSTPRTPASR*PHGAMAPGPAPQLR
Trigger: GCGGAGCTGAGGAGCAGGGCCGGGCGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCGTGCGCGGGGTGCTGCTTGACATCTCGGGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368842.10
ENST00000392757.8
CDS GCA 72 bp CAGCCCCGCATGCGGCCGGCGGTTCCACACCGTCTCTaGCAGGGCCCGGGCCCCCTCCACATGCTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: QPRMRPAVPHRL*QGPGPLHMLEV
Trigger: CACTTCCAGCATGTGGAGGGGGCCCGGGCCCTGGCAGAGACGGTGTGGAACCGCCGGCCGCATGCGGGGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CAA 72 bp ATGTCAAGCAGCACCCCGCGCACGCCAGCCAGCCGCTaGCCCCACGGTGCCATGGCGCCCGGCCCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: MSSSTPRTPASR*PHGAMAPGPAP
Trigger: AGGAGCAGGGCCGGGCGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCGTGCGCGGGGTGCTGCTTGACAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS GCA 72 bp CTTAGCCCATTGGCAGCCCCGAACTCCAGCCCCGCATaGGGCCGGCGGTTCCACACCGTCTCTGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LSPLAAPNSSPA*GRRFHTVSARA
Trigger: GGCCCTGGCAGAGACGGTGTGGAACCGCCGGCCGCATGCGGGGCTGGAGTTCGGGGCTGCCAATGGGCTAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp CCGGTGCGCACCTGCAGCGCTCTCATTCCACACCGCTaGGCACCGCCGACGTCGCCCACGATATCGTCCCCA +
Preference number: 6 (lower is better)
Translates to: PVRTCSALIPHR*APPTSPTISSP
Trigger: TGGGGACGATATCGTGGGCGACGTCGGCGGTGCCCAGCGGTGTGGAATGAGAGCGCTGCAGGTGCGCACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368842.10
ENST00000481452.1
CDS GCA 72 bp TGCTCGTCACTGGGCCTGAACTTCCCGGTGCGCACCTaGAGCGCTCTCATTCCACACCGCTGGGCACCGCCG +
Preference number: 6 (lower is better)
Translates to: CSSLGLNFPVRT*SALIPHRWAPP
Trigger: CGGCGGTGCCCAGCGGTGTGGAATGAGAGCGCTGCAGGTGCGCACCGGGAAGTTCAGGCCCAGTGACGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS GCA 72 bp CCAGCTGGCACTGACCTGAACTTCCCGGTGCGCACCTaGAGCGCTCTCATTCCACACCGCTGGGCACCGCCG +
Preference number: 6 (lower is better)
Translates to: PAGTDLNFPVRT*SALIPHRWAPP
Trigger: CGGCGGTGCCCAGCGGTGTGGAATGAGAGCGCTGCAGGTGCGCACCGGGAAGTTCAGGTCAGTGCCAGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481452.1
CDS CCA 72 bp GGTGCTCGTCACTGGGCCAGCAGCCAGGGATGGTCTTaGAGAGGCGGGCGATTCTTGGGTCTGGGGCGCACC +
Preference number: 6 (lower is better)
Translates to: GARHWASSQGWS*RGGRFLGLGRT
Trigger: GGTGCGCCCCAGACCCAAGAATCGCCCGCCTCTCCAAGACCATCCCTGGCTGCTGGCCCAGTGACGAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482963.1
ENST00000493240.1
CDS CCA 72 bp GCCAGTCTGAGTCTCGTGGGCCTTTTCTGCAGGCCCTaGGGTTGCGGAGCAGGCAGGGGGACGTCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: ASLSLVGLFCRP*GCGAGRGTSVA
Trigger: AGCCACCGACGTCCCCCTGCCTGCTCCGCAACCCCAGGGCCTGCAGAAAAGGCCCACGAGACTCAGACTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp AGCAGGTATGGTCGCAGGCCTTGCTCCTTCAGGATCTaGCAGGCAGCTGGTGCCGGGGCGGTCACCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SRYGRRPCSFRI*QAAGAGAVTSC
Trigger: GCAGGAGGTGACCGCCCCGGCACCAGCTGCCTGCCAGATCCTGAAGGAGCAAGGCCTGCGACCATACCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS CCA 72 bp AGGGATGGTCTTGGAGAGGCGGGCGATTCTTGGGTCTaGGGCGCACCCCTTCCACCCCACCTGCAGGCGACT +
Preference number: 6 (lower is better)
Translates to: RDGLGEAGDSWV*GAPLPPHLQAT
Trigger: AGTCGCCTGCAGGTGGGGTGGAAGGGGTGCGCCCCAGACCCAAGAATCGCCCGCCTCTCCAAGACCATCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482963.1
ENST00000493240.1
CDS CCA 72 bp CCGGATGGTGCTCGTCACTGGGCCAGCAGCCAGGGATaGTCTTGGAGAGGCGGGCGATTCTTGGGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: PDGARHWASSQG*SWRGGRFLGLG
Trigger: CCCCAGACCCAAGAATCGCCCGCCTCTCCAAGACCATCCCTGGCTGCTGGCCCAGTGACGAGCACCATCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482963.1
ENST00000493240.1
CDS CAA 72 bp TGGTGCTCGTCACTGGGCCAGCAGCCAGGGATGGTCTaGGAGAGGCGGGCGATTCTTGGGTCTGGGGCGCAC +
Preference number: 6 (lower is better)
Translates to: WCSSLGQQPGMV*ERRAILGSGAH
Trigger: GTGCGCCCCAGACCCAAGAATCGCCCGCCTCTCCAAGACCATCCCTGGCTGCTGGCCCAGTGACGAGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482963.1
ENST00000493240.1
CDS GCA 72 bp AGGGGGACGTCGGTGGCTGGGGGACATCCCGCCACCTaGCAAGTAGCTGCAATGGGAAGAGATGCGGTTCCC +
Preference number: 6 (lower is better)
Translates to: RGTSVAGGHPAT*QVAAMGRDAVP
Trigger: GGGAACCGCATCTCTTCCCATTGCAGCTACTTGGCAGGTGGCGGGATGTCCCCCAGCCACCGACGTCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp TGCAGTCACCTGGGCCGGTGGCGCTCACATCTGACGTaGAGGCCTCTGCTTCACTTGGCCCAGTTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: CSHLGRWRSHLT*RPLLHLAQFPA
Trigger: GGCTGGGAACTGGGCCAAGTGAAGCAGAGGCCTCCACGTCAGATGTGAGCGCCACCGGCCCAGGTGACTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CAA 90 bp CTGGGCCGGTGGCGCTCACATCTGACGTGGAGGCCTCTGCTTCACTaGGCCCAGTTCCCAGCCTTGTCGGCAGTGAGGACATGGACCCTC +
Preference number: 6 (lower is better)
Translates to: LGRWRSHLTWRPLLH*AQFPALSAVRTWTL
Trigger: GAGGGTCCATGTCCTCACTGCCGACAAGGCTGGGAACTGGGCCAAGTGAAGCAGAGGCCTCCACGTCAGATGTGAGCGCCACCGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 72 bp GGTGGCTGGGGGACATCCCGCCACCTGCCAAGTAGCTaGAATGGGAAGAGATGCGGTTCCCGTGACAGCCAG +
Preference number: 6 (lower is better)
Translates to: GGWGTSRHLPSS*NGKRCGSRDSQ
Trigger: CTGGCTGTCACGGGAACCGCATCTCTTCCCATTGCAGCTACTTGGCAGGTGGCGGGATGTCCCCCAGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 72 bp CTGGAGGGCTCAAGCCGAACGGAAGGAGGGAAGAACTaGAGTCACCTGGGCCGGTGGCGCTCACATCTGACG +
Preference number: 6 (lower is better)
Translates to: LEGSSRTEGGKN*SHLGRWRSHLT
Trigger: CGTCAGATGTGAGCGCCACCGGCCCAGGTGACTGCAGTTCTTCCCTCCTTCCGTTCGGCTTGAGCCCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp GCCCCACCAGCTCTGCCCGGGACTTCTGCGACTCGTTaGTGCAGAACCTCACCTTCAGCCGGGAACGCTTCA +
Preference number: 6 (lower is better)
Translates to: APPALPGTSATR*CRTSPSAGNAS
Trigger: TGAAGCGTTCCCGGCTGAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGAGCTGGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS CCA 72 bp AGGGCCAGGAAGTGCCCATCAGCCTTCACTTCCGGATaGTGCTCGTCACTGGGCCAGCAGCCAGGGATGGTC +
Preference number: 6 (lower is better)
Translates to: RARKCPSAFTSG*CSSLGQQPGMV
Trigger: GACCATCCCTGGCTGCTGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGCACTTCCTGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp CCGTCCTCCGTCTGGCACAACGTGCCGTGTTCTCTCTaGTTAGGGTTTGGGTGGGACGGAGACTGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: PSSVWHNVPCSL*LGFGWDGDCAP
Trigger: AGGGGCGCAGTCTCCGTCCCACCCAAACCCTAACCAGAGAGAACACGGCACGTTGTGCCAGACGGAGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CAA 90 bp CATCTGACGTGGAGGCCTCTGCTTCACTTGGCCCAGTTCCCAGCCTaGTCGGCAGTGAGGACATGGACCCTCGCTGGCATCCGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: HLTWRPLLHLAQFPA*SAVRTWTLAGIRPP
Trigger: CGGAGGACGGATGCCAGCGAGGGTCCATGTCCTCACTGCCGACAAGGCTGGGAACTGGGCCAAGTGAAGCAGAGGCCTCCACGTCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS TCA 72 bp TGCTTCACTTGGCCCAGTTCCCAGCCTTGTCGGCAGTaGGGACATGGACCCTCGCTGGCATCCGTCCTCCGT +
Preference number: 6 (lower is better)
Translates to: CFTWPSSQPCRQ*GHGPSLASVLR
Trigger: ACGGAGGACGGATGCCAGCGAGGGTCCATGTCCTCACTGCCGACAAGGCTGGGAACTGGGCCAAGTGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS TCA 72 bp AGAACTGCAGTCACCTGGGCCGGTGGCGCTCACATCTaGCGTGGAGGCCTCTGCTTCACTTGGCCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: RTAVTWAGGAHI*RGGLCFTWPSS
Trigger: GGAACTGGGCCAAGTGAAGCAGAGGCCTCCACGTCAGATGTGAGCGCCACCGGCCCAGGTGACTGCAGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 72 bp CCACCAGCTCTGCCCGGGACTTCTGCGACTCGTTGGTaGAGAACCTCACCTTCAGCCGGGAACGCTTCAGTC +
Preference number: 6 (lower is better)
Translates to: PPALPGTSATRW*RTSPSAGNASV
Trigger: GACTGAAGCGTTCCCGGCTGAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGAGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS GCA 72 bp GCCAGGAAGTGCCCATCAGCCTTCACTTCCGGATGGTaGTCGTCACTGGGCCAGCAGCCAGGGATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: ARKCPSAFTSGW*SSLGQQPGMVL
Trigger: CAAGACCATCCCTGGCTGCTGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGCACTTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 72 bp GAGACTGCGCCCCTGTTCCTGGTCCGCCTAAGTCTCTaGCAGTCTGAGTCTCGTGGGCCTTTTCTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: ETAPLFLVRLSL*QSESRGPFLQA
Trigger: GGCCTGCAGAAAAGGCCCACGAGACTCAGACTGGCAGAGACTTAGGCGGACCAGGAACAGGGGCGCAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp CTGCTGCTCACTCCCAGCCTCGGTGGGAAAGACCCCTaGGAGCACCCCGGACCTGTGGTCCTGAGTCTTTTT +
Preference number: 6 (lower is better)
Translates to: LLLTPSLGGKDP*EHPGPVVLSLF
Trigger: AAAAAGACTCAGGACCACAGGTCCGGGGTGCTCCCAGGGGTCTTTCCCACCGAGGCTGGGAGTGAGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp CACAACGTGCCGTGTTCTCTCTGGTTAGGGTTTGGGTaGGACGGAGACTGCGCCCCTGTTCCTGGTCCGCCT +
Preference number: 6 (lower is better)
Translates to: HNVPCSLWLGFG*DGDCAPVPGPP
Trigger: AGGCGGACCAGGAACAGGGGCGCAGTCTCCGTCCCACCCAAACCCTAACCAGAGAGAACACGGCACGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp CTGGCACAACGTGCCGTGTTCTCTCTGGTTAGGGTTTaGGTGGGACGGAGACTGCGCCCCTGTTCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: LAQRAVFSLVRV*VGRRLRPCSWS
Trigger: GGACCAGGAACAGGGGCGCAGTCTCCGTCCCACCCAAACCCTAACCAGAGAGAACACGGCACGTTGTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp ACGGAAGGAGGGAAGAACTGCAGTCACCTGGGCCGGTaGCGCTCACATCTGACGTGGAGGCCTCTGCTTCAC +
Preference number: 6 (lower is better)
Translates to: TEGGKNCSHLGR*RSHLTWRPLLH
Trigger: GTGAAGCAGAGGCCTCCACGTCAGATGTGAGCGCCACCGGCCCAGGTGACTGCAGTTCTTCCCTCCTTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp GCGGCACCAGGTCAGGCCTCAGCCTTTCCGATCCTCTaGAGGGCTCAAGCCGAACGGAAGGAGGGAAGAACT +
Preference number: 6 (lower is better)
Translates to: AAPGQASAFPIL*RAQAERKEGRT
Trigger: AGTTCTTCCCTCCTTCCGTTCGGCTTGAGCCCTCCAGAGGATCGGAAAGGCTGAGGCCTGACCTGGTGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CCA 72 bp TTGTGCCCCTGCTGTGTGAAGGGGTCTTGTGCGCTTTaGCAAGGGCCTTCCCACCAGCTTGGCAGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: LCPCCVKGSCAL*QGPSHQLGRGR
Trigger: CCTCCCTCTGCCAAGCTGGTGGGAAGGCCCTTGCCAAAGCGCACAAGACCCCTTCACACAGCAGGGGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493240.1
CDS CAA 72 bp TGGAGGCCTCTGCTTCACTTGGCCCAGTTCCCAGCCTaGTCGGCAGTGAGGACATGGACCCTCGCTGGCATC +
Preference number: 6 (lower is better)
Translates to: WRPLLHLAQFPA*SAVRTWTLAGI
Trigger: GATGCCAGCGAGGGTCCATGTCCTCACTGCCGACAAGGCTGGGAACTGGGCCAAGTGAAGCAGAGGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CAA 90 bp CGACTCTGCCTCAAAGAGCTTGTGCCCCTGCTGTGTGAAGGGGTCTaGTGCGCTTTGGCAAGGGCCTTCCCACCAGCTTGGCAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RLCLKELVPLLCEGV*CALARAFPPAWQRE
Trigger: CTCCCTCTGCCAAGCTGGTGGGAAGGCCCTTGCCAAAGCGCACAAGACCCCTTCACACAGCAGGGGCACAAGCTCTTTGAGGCAGAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482963.1
ENST00000493240.1
CDS CAA 90 bp GTTCACCTCCTAAACCAGGACAGTTCTGAGGGGCAGCTGGAACTGTaGACACGCACTCTGGCACGGGAGGCGGACCCAAGAGCACCCACC +
Preference number: 6 (lower is better)
Translates to: VHLLNQDSSEGQLEL*TRTLAREADPRAPT
Trigger: GGTGGGTGCTCTTGGGTCCGCCTCCCGTGCCAGAGTGCGTGTCAACAGTTCCAGCTGCCCCTCAGAACTGTCCTGGTTTAGGAGGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS TCA 72 bp GCGACTCTGCCTCAAAGAGCTTGTGCCCCTGCTGTGTaGAGGGGTCTTGTGCGCTTTGGCAAGGGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: ATLPQRACAPAV*RGLVRFGKGLP
Trigger: GGGAAGGCCCTTGCCAAAGCGCACAAGACCCCTTCACACAGCAGGGGCACAAGCTCTTTGAGGCAGAGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482963.1
ENST00000493240.1
CDS GCA 72 bp TTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTaGTCGTCACTGGGCCTGAACTTCCCGGTGCGCACC +
Preference number: 6 (lower is better)
Translates to: LSTYPSAFTSGW*SSLGLNFPVRT
Trigger: GGTGCGCACCGGGAAGTTCAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS GCA 72 bp GCCCTCCAACCACCCCATGCCATCAAAGCTGGGGGCTaGTCTGCCACTTCATCTGCAGGTGCCAGTGTTGAC +
Preference number: 6 (lower is better)
Translates to: ALQPPHAIKAGG*SATSSAGASVD
Trigger: GTCAACACTGGCACCTGCAGATGAAGTGGCAGAGCAGCCCCCAGCTTTGATGGCATGGGGTGGTTGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS GCA 72 bp CCTGCAGGCGACTCTGCCTCAAAGAGCTTGTGCCCCTaGTGTGTGAAGGGGTCTTGTGCGCTTTGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: PAGDSASKSLCP*CVKGSCALWQG
Trigger: CCCTTGCCAAAGCGCACAAGACCCCTTCACACAGCAGGGGCACAAGCTCTTTGAGGCAGAGTCGCCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482963.1
ENST00000493240.1
CDS CCA 72 bp AGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATaGTGCTCGTCACTGGGCCTGGTGGGCTTCCACTCC +
Preference number: 6 (lower is better)
Translates to: RLSTYPSAFTSG*CSSLGLVGFHS
Trigger: GGAGTGGAAGCCCACCAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS CCA 72 bp AGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATaGTGCTCGTCACTGGGCCTGAACTTCCCGGTGCGC +
Preference number: 6 (lower is better)
Translates to: RLSTYPSAFTSG*CSSLGLNFPVR
Trigger: GCGCACCGGGAAGTTCAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368842.10
CDS CCA 72 bp AGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATaGTGCTCGTCACTGGGCCAGCAGCCAGGGATGGTC +
Preference number: 6 (lower is better)
Translates to: RLSTYPSAFTSG*CSSLGQQPGMV
Trigger: GACCATCCCTGGCTGCTGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493240.1
CDS CAA 72 bp TGGCGCTCACATCTGACGTGGAGGCCTCTGCTTCACTaGGCCCAGTTCCCAGCCTTGTCGGCAGTGAGGACA +
Preference number: 6 (lower is better)
Translates to: WRSHLTWRPLLH*AQFPALSAVRT
Trigger: TGTCCTCACTGCCGACAAGGCTGGGAACTGGGCCAAGTGAAGCAGAGGCCTCCACGTCAGATGTGAGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS TCA 72 bp GGGCTGCTCTGCCACTTCATCTGCAGGTGCCAGTGTTaGCTTCGCTTCCTGGAGGGACAGGCCAGGTTTCCT +
Preference number: 6 (lower is better)
Translates to: GLLCHFICRCQC*LRFLEGQARFP
Trigger: AGGAAACCTGGCCTGTCCCTCCAGGAAGCGAAGTCAACACTGGCACCTGCAGATGAAGTGGCAGAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS GCA 72 bp TGTTCTCTCTGGTTAGGGTTTGGGTGGGACGGAGACTaGGCCCCTGTTCCTGGTCCGCCTAAGTCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: CSLWLGFGWDGD*APVPGPPKSLP
Trigger: TGGCAGAGACTTAGGCGGACCAGGAACAGGGGCGCAGTCTCCGTCCCACCCAAACCCTAACCAGAGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 72 bp TTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTaGTCGTCACTGGGCCAGCAGCCAGGGATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: LSTYPSAFTSGW*SSLGQQPGMVL
Trigger: CAAGACCATCCCTGGCTGCTGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493240.1
CDS CCA 72 bp ACTTCATCTGCAGGTGCCAGTGTTGACTTCGCTTCCTaGAGGGACAGGCCAGGTTTCCTGCCCTCGGTGGTC +
Preference number: 6 (lower is better)
Translates to: TSSAGASVDFAS*RDRPGFLPSVV
Trigger: GACCACCGAGGGCAGGAAACCTGGCCTGTCCCTCCAGGAAGCGAAGTCAACACTGGCACCTGCAGATGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS CCA 72 bp AGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATaGTGCTCGTCACTGGGCCTGTCCCCATCTCCCACT +
Preference number: 6 (lower is better)
Translates to: RLSTYPSAFTSG*CSSLGLSPSPT
Trigger: AGTGGGAGATGGGGACAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS CCA 72 bp GAGGACATGGACCCTCGCTGGCATCCGTCCTCCGTCTaGCACAACGTGCCGTGTTCTCTCTGGTTAGGGTTT +
Preference number: 6 (lower is better)
Translates to: EDMDPRWHPSSV*HNVPCSLWLGF
Trigger: AAACCCTAACCAGAGAGAACACGGCACGTTGTGCCAGACGGAGGACGGATGCCAGCGAGGGTCCATGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CAA 90 bp CACTGGGCCTGGTGGGCTTCCACTCCTATCGCTTGCAGGGCAGACTaGAAAAACTCAGGAGAAGGCTTCCCCACCACCTCGGCTTTGATG +
Preference number: 6 (lower is better)
Translates to: HWAWWASTPIACRAD*KNSGEGFPTTSALM
Trigger: CATCAAAGCCGAGGTGGTGGGGAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGGCCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS TCA 72 bp TGCCCCGTGTGTTCACCTCCTAAACCAGGACAGTTCTaGGGGGCAGCTGGAACTGTTGACACGCACTCTGGC +
Preference number: 6 (lower is better)
Translates to: CPVCSPPKPGQF*GAAGTVDTHSG
Trigger: GCCAGAGTGCGTGTCAACAGTTCCAGCTGCCCCTCAGAACTGTCCTGGTTTAGGAGGTGAACACACGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 72 bp TTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTaGTCGTCACTGGGCCTGGTGGGCTTCCACTCCTAT +
Preference number: 6 (lower is better)
Translates to: LSTYPSAFTSGW*SSLGLVGFHSY
Trigger: ATAGGAGTGGAAGCCCACCAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS GCA 72 bp TTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTaGTCGTCACTGGGCCTGTCCCCATCTCCCACTGTA +
Preference number: 6 (lower is better)
Translates to: LSTYPSAFTSGW*SSLGLSPSPTV
Trigger: TACAGTGGGAGATGGGGACAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS GCA 72 bp TTGTCCACGTACCCATCAGCCTTCACTTCCGGATGGTaGTCGTCACTGGGCCTTGGATGGTGGGGACATGAG +
Preference number: 6 (lower is better)
Translates to: LSTYPSAFTSGW*SSLGLGWWGHE
Trigger: CTCATGTCCCCACCATCCAAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492187.1
CDS CCA 72 bp AGGTTGTCCACGTACCCATCAGCCTTCACTTCCGGATaGTGCTCGTCACTGGGCCTTGGATGGTGGGGACAT +
Preference number: 6 (lower is better)
Translates to: RLSTYPSAFTSG*CSSLGLGWWGH
Trigger: ATGTCCCCACCATCCAAGGCCCAGTGACGAGCACCATCCGGAAGTGAAGGCTGATGGGTACGTGGACAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492187.1
CDS CAA 90 bp ATGACGGCCTGGTGGGCTTCCACTCCTATCGCTTGCAGGGCAGACTaGAAAAACTCAGGAGAAGGCTTCCCCACCACCTCGGCTTTGATG +
Preference number: 6 (lower is better)
Translates to: MTAWWASTPIACRAD*KNSGEGFPTTSALM
Trigger: CATCAAAGCCGAGGTGGTGGGGAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGGCCGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368842.10
ENST00000481452.1
CDS TCA 72 bp GTATGCTCCTTCCACAGGGCGAGTTGCTCTCTCTTCTaGGCATGCAGAATGTGCCCTCCAACCACCCCATGC +
Preference number: 6 (lower is better)
Translates to: VCSFHRASCSLF*ACRMCPPTTPC
Trigger: GCATGGGGTGGTTGGAGGGCACATTCTGCATGCTCAGAAGAGAGAGCAACTCGCCCTGTGGAAGGAGCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS GCA 72 bp CGTCACTGGGCCTGGTGGGCTTCCACTCCTATCGCTTaGAGGGCAGACTTGAAAAACTCAGGAGAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: RHWAWWASTPIA*RADLKNSGEGF
Trigger: GAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGGCCCAGTGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS CCA 72 bp ATAAGTGGTACATTGAGCCCAGGGCTTGGTACTGTGTaGGCCCTAGAGCTGGAAGGTGCAAGGGTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: ISGTLSPGLGTV*ALELEGARVGE
Trigger: CTCACCCACCCTTGCACCTTCCAGCTCTAGGGCCCACACAGTACCAAGCCCTGGGCTCAATGTACCACTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CAA 72 bp CCCATCTCCCACTGTATGCTCCTTCCACAGGGCGAGTaGCTCTCTCTTCTGAGCATGCAGAATGTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PISHCMLLPQGE*LSLLSMQNVPS
Trigger: GGAGGGCACATTCTGCATGCTCAGAAGAGAGAGCAACTCGCCCTGTGGAAGGAGCATACAGTGGGAGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486535.1
CDS CAA 72 bp TCGTCACTGGGCCTGGTGGGCTTCCACTCCTATCGCTaGCAGGGCAGACTTGAAAAACTCAGGAGAAGGCTT +
Preference number: 6 (lower is better)
Translates to: SSLGLVGFHSYR*QGRLEKLRRRL
Trigger: AAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGGCCCAGTGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368839.1
CDS TCA 72 bp AAAACTCAGGAGAAGGCTTCCCCACCACCTCGGCTTTaGTGCCACAGGCATACTCAAGCGCCTTCATGTAGG +
Preference number: 6 (lower is better)
Translates to: KTQEKASPPPRL*CHRHTQAPSCR
Trigger: CCTACATGAAGGCGCTTGAGTATGCCTGTGGCATCAAAGCCGAGGTGGTGGGGAAGCCTTCTCCTGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
ENST00000481452.1
CDS GCA 72 bp ATCATGACGGCCTGGTGGGCTTCCACTCCTATCGCTTaGAGGGCAGACTTGAAAAACTCAGGAGAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: IMTAWWASTPIA*RADLKNSGEGF
Trigger: GAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGGCCGTCATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368842.10
ENST00000481452.1
CDS CAA 90 bp GAAAGTAACTGGTGGGCTTCCACTCCTATCGCTTGCAGGGCAGACTaGAAAAACTCAGGAGAAGGCTTCCCCACCACCTCGGCTTTGATG +
Preference number: 6 (lower is better)
Translates to: ESNWWASTPIACRAD*KNSGEGFPTTSALM
Trigger: CATCAAAGCCGAGGTGGTGGGGAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGTTACTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS CAA 72 bp AATCATGACGGCCTGGTGGGCTTCCACTCCTATCGCTaGCAGGGCAGACTTGAAAAACTCAGGAGAAGGCTT +
Preference number: 6 (lower is better)
Translates to: NHDGLVGFHSYR*QGRLEKLRRRL
Trigger: AAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGGCCGTCATGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368842.10
ENST00000481452.1
CDS CCA 72 bp AATGGGAAGAGATGCGGTTCCCGTGACAGCCAGGCCTaGATGTTCAAGTCATGTGAGACCACCAAATACCTT +
Preference number: 6 (lower is better)
Translates to: NGKRCGSRDSQA*MFKSCETTKYL
Trigger: AAGGTATTTGGTGGTCTCACATGACTTGAACATCCAGGCCTGGCTGTCACGGGAACCGCATCTCTTCCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS GCA 72 bp ACTGAAAGTAACTGGTGGGCTTCCACTCCTATCGCTTaGAGGGCAGACTTGAAAAACTCAGGAGAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: TESNWWASTPIA*RADLKNSGEGF
Trigger: GAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGTTACTTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS TCA 72 bp GCAATTACCACACAGTTTGGGTTGGATGTGTCGATCTaGTCAAATTCTGAGCGGACTCCGTCATGGATGAGC +
Preference number: 6 (lower is better)
Translates to: AITTQFGLDVSI*SNSERTPSWMS
Trigger: GCTCATCCATGACGGAGTCCGCTCAGAATTTGATCAGATCGACACATCCAACCCAAACTGTGTGGTAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS GCA 72 bp AAAAACTCAGGAAAAGCCGCAGGCATTTCTGCTTCTTaGTTTCATACTGAAAGTAACTGGTGGGCTTCCACT +
Preference number: 6 (lower is better)
Translates to: KNSGKAAGISAS*FHTESNWWAST
Trigger: AGTGGAAGCCCACCAGTTACTTTCAGTATGAAAGCAAGAAGCAGAAATGCCTGCGGCTTTTCCTGAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392757.8
CDS CAA 72 bp AAAAGCTTTCTCCTGCGTCTGCAATTACCACACAGTTaGGGTTGGATGTGTCGATCTGATCAAATTCTGAGC +
Preference number: 6 (lower is better)
Translates to: KSFLLRLQLPHS*GWMCRSDQILS
Trigger: GCTCAGAATTTGATCAGATCGACACATCCAACCCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368839.1
ENST00000368842.10
ENST00000392757.8
CDS CAA 90 bp TCATGTGAGACCACCAAATACCTTGTTGCACTAAGCCAATTTGAATaGAGTTTTCATAAGTGGTACATTGAGCCCAGGGCTTGGTACTGT +
Preference number: 6 (lower is better)
Translates to: SCETTKYLVALSQFE*SFHKWYIEPRAWYC
Trigger: ACAGTACCAAGCCCTGGGCTCAATGTACCACTTATGAAAACTCAATTCAAATTGGCTTAGTGCAACAAGGTATTTGGTGGTCTCACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1
CDS CAA 72 bp ACCACCAAATACCTTGTTGCACTAAGCCAATTTGAATaGAGTTTTCATAAGTGGTACATTGAGCCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TTKYLVALSQFE*SFHKWYIEPRA
Trigger: AGCCCTGGGCTCAATGTACCACTTATGAAAACTCAATTCAAATTGGCTTAGTGCAACAAGGTATTTGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482963.1