Pregenerated sensors for LHFPL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000182508Ensembl transcript IDs: ENST00000371968.8, ENST00000478229.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGTACTCCAGAGATGTTTGGGGGTGACAATAAATACTTGGGAATaGACTGATGAACTGTGTGAATGGAGTGGTAGGAACCAGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: VVLQRCLGVTINTWE*TDELCEWSGRNQLC Trigger: GCAGAGCTGGTTCCTACCACTCCATTCACACAGTTCATCAGTTCATTCCCAAGTATTTATTGTCACCCCCAAACATCTCTGGAGTACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCCGGGTTAGCACGACTTaGCAGTTGGGTAAATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ISCSLPAQLFLPSLSFGSRVSTT*QLGKCL Trigger: CAGACATTTACCCAACTGGCAAGTCGTGCTAACCCG...GGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| 3UTR CAA 90 bp | TCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCTATTTaGCATAAAGGGGTACTTTGGGTCTTCGGGTTAGCACGACTTGCC | + |
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Preference number: 2 (lower is better) Translates to: SLHNYSYPALALDPI*HKGVLWVFGLARLA Trigger: GGCAAGTCGTGCTAACCCGAAGACCCAAAGTACCCCTTTATGCAAAATAGGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| 3UTR CAA 90 bp | TCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTaGGATCCTATTTTGCATAAAGGGGTACTTTGGGTCTTCGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: SRAPSLHNYSYPALA*DPILHKGVLWVFGL Trigger: TAACCCGAAGACCCAAAGTACCCCTTTATGCAAAATAGGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCTTTATAAACAGCCAGTaGCCTACTGGCTTAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: ISCSLPAQLFLPSLSFGSFINSQ*PTGLKI Trigger: TATCTTTAAGCCAGTAGGTCACTGGCTGTTTATAAA...GGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCAGCACGACTTGCCAGTaGGGTAAATGTCTGAGAATG | + |
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Preference number: 3 (lower is better) Translates to: ISCSLPAQLFLPSLSFGSSTTCQ*GKCLRM Trigger: CATTCTCAGACATTTACCCAACTGGCAAGTCGTGCT...GGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | GAACTGTGTGAATGGAGTGGTAGGAACCAGCTCTGCCCATCTCGTGCTCCCTCCGGTAGGAACCAGCTCTaGCCATCTCGTGCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ELCEWSGRNQLCPSRAPSGRNQL*PSRAPS Trigger: GGAGGGAGCACGAGATGGGCAGAGCTGGTTCCTACC...GGAGGGAGCACGAGATGGGCAGAGCTGGTTCCTACCACTCCATTCACACAGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | GAACTGTGTGAATGGAGTGGTAGGAACCAGCTCTGCCCATCTCGTGCTCCCTCCGCAGATCAACATGGCTaGAGCTGCTCCACCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ELCEWSGRNQLCPSRAPSADQHG*SCSTSS Trigger: GCTGGAGGTGGAGCAGCTGCAGCCATGTTGATCTGC...GGAGGGAGCACGAGATGGGCAGAGCTGGTTCCTACCACTCCATTCACACAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | CCCATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGACACCTGTCACCACTGTaGACATCTGCCAGGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PISCSLPAQLFLPSLSFGHLSPL*TSARPG Trigger: GCCTGGCCTGGCAGATGTGCACAGTGGTGACAGGTG...TCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CCA 90 bp | CTGATGAACTGTGTGAATGGAGTGGTAGGAACCAGCTCTGCCCATCTCGTGCTCCTGCCAGGCCAGGCTTaGGATGGCATTGAAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LMNCVNGVVGTSSAHLVLLPGQA*DGIEAG Trigger: GCCAGCTTCAATGCCATCCCAAGCCTGGCCTGGCAG...GAGCACGAGATGGGCAGAGCTGGTTCCTACCACTCCATTCACACAGTTCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | CTGCCCATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTACCACTGTGCACATCTaGCAGGCCAGGCTTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: LPISCSLPAQLFLPSLSFTTVHI*QARLGM Trigger: CATCCCAAGCCTGGCCTGGCAGATGTGCACAGTGGT...AAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGATGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | CCCATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGAGCTCTGCCCATCTCGTaGTCCCTCCCTGCACAACTA | + |
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Preference number: 4 (lower is better) Translates to: PISCSLPAQLFLPSLSFGALPIS*SLPAQL Trigger: TAGTTGTGCAGGGAGGGAGCACGAGATGGGCAGAGC...TCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | GAACTGTGTGAATGGAGTGGTAGGAACCAGCTCTGCCCATCTCGTGCTCCCTCCTCAAAGCTCAAGGTTTaGGGCAATGGTCAAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ELCEWSGRNQLCPSRAPSSKLKV*GNGQAP Trigger: TGGAGCTTGACCATTGCCTCAAACCTTGAGCTTTGA...GGAGGGAGCACGAGATGGGCAGAGCTGGTTCCTACCACTCCATTCACACAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | CTGATGAACTGTGTGAATGGAGTGGTAGGAACCAGCTCTGCCCATCTCGTGCTCTCCAACAAACTGCGCTaGTCCCATGCAACGTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LMNCVNGVVGTSSAHLVLSNKLR*SHATSH Trigger: ATGGGACGTTGCATGGGAGCAGCGCAGTTTGTTGGA...GAGCACGAGATGGGCAGAGCTGGTTCCTACCACTCCATTCACACAGTTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | ATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCAGCCCTCCAACAAACTaGGCTGCTCCCATGCAACGT | + |
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Preference number: 4 (lower is better) Translates to: ISCSLPAQLFLPSLSFGSSPPTN*AAPMQR Trigger: ACGTTGCATGGGAGCAGCGCAGTTTGTTGGAGGGCT...GGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | CTGATGAACTGTGTGAATGGAGTGGTAGGAACCAGCTCTGCCCATCTCGTGCTCCTCGTGCTCCCTCCCTaGACAACTATTCTTACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LMNCVNGVVGTSSAHLVLLVLPP*TTILTQ Trigger: CTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAG...GAGCACGAGATGGGCAGAGCTGGTTCCTACCACTCCATTCACACAGTTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | TCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCTACCACGAAGGCTGACTaGCTTGTTCCCTCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SRAPSLHNYSYPALALDPTTKAD*LVPSLQ Trigger: CTGAAGAGAGGGAACAAGTCAGTCAGCCTTCGTGGT...AGGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | TCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCTTCTGACCACGAAGGCTaGCTGACTTGTTCCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SRAPSLHNYSYPALALDPSDHEG*LTCSLS Trigger: AGAGAGGGAACAAGTCAGTCAGCCTTCGTGGTCAGA...AGGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | GGTACTTTGGGTCTTCGGGTTAGCACGACTTGCCAGTTGGGTAAATGTCTGAGAACCTCCGGAATGTGCTaGATGACACTGGCTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GTLGLRVSTTCQLGKCLRTSGMC*MTLASP Trigger: TGGGGAAGCCAGTGTCATTCAGCACATTCCGGAGGT...TCTCAGACATTTACCCAACTGGCAAGTCGTGCTAACCCGAAGACCCAAAGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | CTGCCCATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTCACATTCTTCCACCATaGTCAGACTGTGTCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LPISCSLPAQLFLPSLSFHILPP*SDCVPL Trigger: GAGAGGGACACAGTCTGATCATGGTGGAAGAATGTG...AAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGATGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | ATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCCCATCATTCTGGAGATaGGCTCCTCCATGCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: ISCSLPAQLFLPSLSFGSPSFWR*APPCSN Trigger: GTTGCTGCATGGAGGAGCTCATCTCCAGAATGATGG...GGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CCA 90 bp | CCCATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCAGGCTGCTCCTCATaGTCACAGGTTTCTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PISCSLPAQLFLPSLSFGSGCSS*SQVSLL Trigger: CAGAAGAGAAACCTGTGACCATGAGGAGCAGCCTGA...TCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CCA 90 bp | GGTACTTTGGGTCTTCGGGTTAGCACGACTTGCCAGTTGGGTAAATGTCTGAGAAGGTGCAGATCAACATaGCTGCAGCTGCTCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: GTLGLRVSTTCQLGKCLRRCRST*LQLLHL Trigger: GAGGTGGAGCAGCTGCAGCCATGTTGATCTGCACCT...TCTCAGACATTTACCCAACTGGCAAGTCGTGCTAACCCGAAGACCCAAAGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | AGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTTTCAGGGCTCCCTCCTCCCGGAATGTGCTGAATaGCACTGGCTTCCCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: SQMTNGLILSTSFQGSLLPECAE*HWLPHL Trigger: CAGATGGGGAAGCCAGTGTCATTCAGCACATTCCGG...GAGGAGGGAGCCCTGAAAAGAGGTACTAAGGATTAGGCCATTTGTCATCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | AGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTTTCAGGGCTCCCTCCTCACTGCGCTGCTCCCATaGAACGTCCCATCATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SQMTNGLILSTSFQGSLLTALLP*NVPSFW Trigger: CCAGAATGATGGGACGTTGCATGGGAGCAGCGCAGT...GAGGAGGGAGCCCTGAAAAGAGGTACTAAGGATTAGGCCATTTGTCATCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | GAACTGTGTGAATGGAGTGGTAGGAACCAGCTCTGCCCATCTCGTGCTCCCTCCACATTCCCACATGTTTaGATTATCTCCGGGCTATTC | + |
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Preference number: 4 (lower is better) Translates to: ELCEWSGRNQLCPSRAPSTFPHV*IISGLF Trigger: GAATAGCCCGGAGATAATGCAAACATGTGGGAATGT...GGAGGGAGCACGAGATGGGCAGAGCTGGTTCCTACCACTCCATTCACACAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | AGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTTTCAGGGCTCCCTCCTCCACAGGTTTCTCTTCTaGCCACGAAGGCTGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: SQMTNGLILSTSFQGSLLHRFLF*PRRLTD Trigger: GTCAGTCAGCCTTCGTGGTCAGAAGAGAAACCTGTG...GAGGAGGGAGCCCTGAAAAGAGGTACTAAGGATTAGGCCATTTGTCATCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | AGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTTTCAGGGCTCCCTCCTCAGCAAGAGAGCCAGGTaGAGATCAACATGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SQMTNGLILSTSFQGSLLSKRAR*RSTWLQ Trigger: CTGCAGCCATGTTGATCTGCACCTGGCTCTCTTGCT...GAGGAGGGAGCCCTGAAAAGAGGTACTAAGGATTAGGCCATTTGTCATCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | AGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTTTCAGGGCTCCCTCCTCTGCTCTCCACCAATATaGCAGGCTTGGGGTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SQMTNGLILSTSFQGSLLCSPPI*QAWGFF Trigger: GAAGAAACCCCAAGCCTGTCATATTGGTGGAGAGCA...GAGGAGGGAGCCCTGAAAAGAGGTACTAAGGATTAGGCCATTTGTCATCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | CTAGGCTATGCTAATGACAGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTCCACCATGGTCAGGCTaGTCCTCATGGTCACAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LGYANDSQMTNGLILSTSPPWSG*SSWSQV Trigger: AACCTGTGACCATGAGGAGCAGCCTGACCATGGTGG...AGAGGTACTAAGGATTAGGCCATTTGTCATCTGACTGTCATTAGCATAGCCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CCA 90 bp | AGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTTTCAGGGCTCCCTCCTCCATAAAGGGGTACTTTaGGTCTTCGGGTTAGCACGA | + |
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Preference number: 4 (lower is better) Translates to: SQMTNGLILSTSFQGSLLHKGVL*VFGLAR Trigger: TCGTGCTAACCCGAAGACCCAAAGTACCCCTTTATG...GAGGAGGGAGCCCTGAAAAGAGGTACTAAGGATTAGGCCATTTGTCATCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CCA 90 bp | AGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTTTCAGGGCTCCCTCCTCGATGAACTGTGTGAATaGAGTGGTAGGAACCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SQMTNGLILSTSFQGSLLDELCE*SGRNQL Trigger: GAGCTGGTTCCTACCACTCCATTCACACAGTTCATC...GAGGAGGGAGCCCTGAAAAGAGGTACTAAGGATTAGGCCATTTGTCATCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | CTGCCCATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTTTTATAAACAGCCAGTaGCCTACTGGCTTAAAGATA | + |
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Preference number: 4 (lower is better) Translates to: LPISCSLPAQLFLPSLSFFINSQ*PTGLKI Trigger: TATCTTTAAGCCAGTAGGTCACTGGCTGTTTATAAA...AAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGATGGGCAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| 3UTR CAA 72 bp | CCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTaGGATCCTATTTTGCATAAAGGGGTACTTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PSLHNYSYPALA*DPILHKGVLWV Trigger: GACCCAAAGTACCCCTTTATGCAAAATAGGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | CTAGGCTATGCTAATGACAGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTCGGGTTAGCACGACTTaGCAGTTGGGTAAATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LGYANDSQMTNGLILSTSRVSTT*QLGKCL Trigger: CAGACATTTACCCAACTGGCAAGTCGTGCTAACCCG...AGAGGTACTAAGGATTAGGCCATTTGTCATCTGACTGTCATTAGCATAGCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| 3UTR CAA 72 bp | GGTACTTTGGGTCTTCGGGTTAGCACGACTTGCCAGTaGGGTAAATGTCTGAGAATGTTTCCTCTGATGAAT | + |
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Preference number: 4 (lower is better) Translates to: GTLGLRVSTTCQ*GKCLRMFPLMN Trigger: ATTCATCAGAGGAAACATTCTCAGACATTTACCCAACTGGCAAGTCGTGCTAACCCGAAGACCCAAAGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CCA 90 bp | ATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCCTAACTGAAATTGATTaGAGACATTCCCACATGTTT | + |
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Preference number: 4 (lower is better) Translates to: ISCSLPAQLFLPSLSFGSLTEID*RHSHMF Trigger: AAACATGTGGGAATGTCTCCAATCAATTTCAGTTAG...GGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CCA 90 bp | AGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTTTCAGGGCTCCCTCCTCCAGCCAGAATACAAATaGAACTCCTATGAATATTCT | + |
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Preference number: 4 (lower is better) Translates to: SQMTNGLILSTSFQGSLLQPEYK*NSYEYS Trigger: AGAATATTCATAGGAGTTCCATTTGTATTCTGGCTG...GAGGAGGGAGCCCTGAAAAGAGGTACTAAGGATTAGGCCATTTGTCATCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR GCA 90 bp | CTAGGCTATGCTAATGACAGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTCTTTGGATCCTATTTTaGATAAAGGGGTACTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LGYANDSQMTNGLILSTSLWILF*IKGYFG Trigger: CCCAAAGTACCCCTTTATGCAAAATAGGATCCAAAG...AGAGGTACTAAGGATTAGGCCATTTGTCATCTGACTGTCATTAGCATAGCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR TCA 90 bp | CTAGGCTATGCTAATGACAGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTAAATGCAAGTATCCTTaGTTAATGTTTTCCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: LGYANDSQMTNGLILSTSKCKYP*LMFSPP Trigger: TGGTGGGGAAAACATTAATCAAGGATACTTGCATTT...AGAGGTACTAAGGATTAGGCCATTTGTCATCTGACTGTCATTAGCATAGCCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CAA 90 bp | GGTACTTTGGGTCTTCGGGTTAGCACGACTTGCCAGTTGGGTAAATGTCTGAGACGAAGGCTGACTGACTaGTTCCCTCTCTTCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GTLGLRVSTTCQLGKCLRRRLTD*FPLFRL Trigger: GAGCCTGAAGAGAGGGAACAAGTCAGTCAGCCTTCG...TCTCAGACATTTACCCAACTGGCAAGTCGTGCTAACCCGAAGACCCAAAGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CAA 90 bp | CTGATGAACTGTGTGAATGGAGTGGTAGGAACCAGCTCTGCCCATCTCGTGCTCAGCACGACTTGCCAGTaGGGTAAATGTCTGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: LMNCVNGVVGTSSAHLVLSTTCQ*GKCLRM Trigger: CATTCTCAGACATTTACCCAACTGGCAAGTCGTGCT...GAGCACGAGATGGGCAGAGCTGGTTCCTACCACTCCATTCACACAGTTCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS TCA 90 bp | TACAGCTTGTTAGACAAGGATGGGAATACTAGCTGCCCTTTGCAGTaGTGCCTGAAAACCTTGCTTTACCTTTGGGAGAAAGGGGCGGAG | + |
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Preference number: 5 (lower is better) Translates to: YSLLDKDGNTSCPLQ*CLKTLLYLWEKGAE Trigger: CTCCGCCCCTTTCTCCCAAAGGTAAAGCAAGGTTTTCAGGCATCACTGCAAAGGGCAGCTAGTATTCCCATCCTTGTCTAACAAGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478229.1 |
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| CDS-3UTR CAA 90 bp | GGTACTTTGGGTCTTCGGGTTAGCACGACTTGCCAGTTGGGTAAATGTCTGAGATTCAAAGCTCAAGGTTaGAGGCAATGGTCAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GTLGLRVSTTCQLGKCLRFKAQG*RQWSSS Trigger: GGAGCTTGACCATTGCCTCAAACCTTGAGCTTTGAA...TCTCAGACATTTACCCAACTGGCAAGTCGTGCTAACCCGAAGACCCAAAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CAA 90 bp | ATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCACTTCTCCTTACAGCTaGTTAGACAAGGATGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: ISCSLPAQLFLPSLSFGSTSPYS*LDKDGN Trigger: ATTCCCATCCTTGTCTAACAAGCTGTAAGGAGAAGT...GGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CAA 90 bp | TCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGATCCTGCTTTGGATCCTATTTaGCATAAAGGGGTACTTTGG | + |
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Preference number: 5 (lower is better) Translates to: SRAPSLHNYSYPALALDPALDPI*HKGVLW Trigger: CCAAAGTACCCCTTTATGCAAAATAGGATCCAAAGC...AGGATCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CAA 90 bp | CCCATCTCGTGCTCCCTCCCTGCACAACTATTCTTACCCAGCCTTAGCTTTGGAATAACGACACAAAAATaGAGCAGTAGTACTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: PISCSLPAQLFLPSLSFGITTQK*SSSTPE Trigger: CTCTGGAGTACTACTGCTCAATTTTTGTGTCGTTAT...TCCAAAGCTAAGGCTGGGTAAGAATAGTTGTGCAGGGAGGGAGCACGAGATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CAA 90 bp | AGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTTTCAGGGCTCCCTCCTCGTACTCCAGAGATGTTaGGGGGTGACAATAAATACT | + |
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Preference number: 5 (lower is better) Translates to: SQMTNGLILSTSFQGSLLVLQRC*GVTINT Trigger: AGTATTTATTGTCACCCCCAAACATCTCTGGAGTAC...GAGGAGGGAGCCCTGAAAAGAGGTACTAAGGATTAGGCCATTTGTCATCTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CAA 90 bp | CTAGGCTATGCTAATGACAGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTACCAATATGACAGGCTaGGGGTTTCTTCCAGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LGYANDSQMTNGLILSTSTNMTG*GFLPAK Trigger: CTTTGCTGGAAGAAACCCCAAGCCTGTCATATTGGT...AGAGGTACTAAGGATTAGGCCATTTGTCATCTGACTGTCATTAGCATAGCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CAA 90 bp | CTAGGCTATGCTAATGACAGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTGACATTCCCACATGTTaGCATTATCTCCGGGCTATT | + |
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Preference number: 5 (lower is better) Translates to: LGYANDSQMTNGLILSTSDIPTC*HYLRAI Trigger: AATAGCCCGGAGATAATGCAAACATGTGGGAATGTC...AGAGGTACTAAGGATTAGGCCATTTGTCATCTGACTGTCATTAGCATAGCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS-3UTR CAA 90 bp | CTAGGCTATGCTAATGACAGTCAGATGACAAATGGCCTAATCCTTAGTACCTCTTACCCAGCCTTAGCTTaGGATCCTATTTTGCATAAA | + |
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Preference number: 5 (lower is better) Translates to: LGYANDSQMTNGLILSTSYPALA*DPILHK Trigger: TTTATGCAAAATAGGATCCAAAGCTAAGGCTGGGTA...AGAGGTACTAAGGATTAGGCCATTTGTCATCTGACTGTCATTAGCATAGCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS GCA 72 bp | AGAGCACAGCCGGCACCTGTCACCACTGTGCACATCTaGCAGGCCAGGCTTGGGATGGCATTGAAGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: RAQPAPVTTVHI*QARLGMALKLA Trigger: TGCCAGCTTCAATGCCATCCCAAGCCTGGCCTGGCAGATGTGCACAGTGGTGACAGGTGCCGGCTGTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS TCA 72 bp | GCGCTGCTCCCATGCAACGTCCCATCATTCTGGAGATaGGCTCCTCCATGCAGCAACCCAGGACAGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: ALLPCNVPSFWR*APPCSNPGQQL Trigger: TAGCTGCTGTCCTGGGTTGCTGCATGGAGGAGCTCATCTCCAGAATGATGGGACGTTGCATGGGAGCAGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS CCA 72 bp | CCCAGCCAAGCCGACAGGTACCTAACTGAAATTGATTaGAGACATTCCCACATGTTTGCATTATCTCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: PSQADRYLTEID*RHSHMFALSPG Trigger: GCCCGGAGATAATGCAAACATGTGGGAATGTCTCCAATCAATTTCAGTTAGGTACCTGTCGGCTTGGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371968.8 |
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| CDS CAA 72 bp | GTATTCCTCATGATGCTCTCCACCAATATGACAGGCTaGGGGTTTCTTCCAGCAAAGCAAGAGAGCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VFLMMLSTNMTG*GFLPAKQESQV Trigger: CACCTGGCTCTCTTGCTTTGCTGGAAGAAACCCCAAGCCTGTCATATTGGTGGAGAGCATCATGAGGAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371968.8 ENST00000478229.1 |
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| CDS TCA 72 bp | TTAGACAAGGATGGGAATACTAGCTGCCCTTTGCAGTaGTGCCTGAAAACCTTGCTTTACCTTTGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LDKDGNTSCPLQ*CLKTLLYLWEK Trigger: TTTCTCCCAAAGGTAAAGCAAGGTTTTCAGGCATCACTGCAAAGGGCAGCTAGTATTCCCATCCTTGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478229.1 |
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