RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LGR5 (Homo sapiens)

Ensembl gene IDs: ENSG00000139292

Ensembl transcript IDs: ENST00000266674.10, ENST00000536515.5, ENST00000540815.2, ENST00000550851.5

Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTTCTTTTCCAGGTATGTTCATTGCTGGCAGTGGAATTCCCTTCTaGGCTTTGGGCACCAAGGAGTTAAAAACAAATCAGATAAGACAT +
Preference number: 1 (lower is better)
Translates to: LSFPGMFIAGSGIPF*ALGTKELKTNQIRH
Trigger: ATGTCTTATCTGATTTGTTTTTAACTCCTTGGTGCCCAAAGCTCAGAAGGGAATTCCACTGCCAGCAATGAACATACCTGGAAAAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR CCA 90 bp CTAAATAAACAGGATAATACGTTACTGAGTCTCTTGAGTCCAAAGTaGTGTCAGATATTGGGTTTGCCAGAGCTACTAGAGATACATGTG +
Preference number: 1 (lower is better)
Translates to: LNKQDNTLLSLLSPK*CQILGLPELLEIHV
Trigger: CACATGTATCTCTAGTAGCTCTGGCAAACCCAATATCTGACACCACTTTGGACTCAAGAGACTCAGTAACGTATTATCCTGTTTATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR GCA 90 bp ATGAGTGAGTTAACAATACCTTACATTATCCATCTAAGGGATTTGTaGCTTAGAAGGATTCTTTCTGAGGAAAGGCAAAGGAGGACTCAA +
Preference number: 1 (lower is better)
Translates to: MSELTIPYIIHLRDL*LRRILSEERQRRTQ
Trigger: TTGAGTCCTCCTTTGCCTTTCCTCAGAAAGAATCCTTCTAAGGCACAAATCCCTTAGATGGATAATGTAAGGTATTGTTAACTCACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR TCA 90 bp TTGATCTGGGCTCACTTAAATAGTGTGATCGATCTATCCCTTAGCTaGACAAATTATACAAAGCAGCATTTAGACTTATATTCACTCTCA +
Preference number: 1 (lower is better)
Translates to: LIWAHLNSVIDLSLS*TNYTKQHLDLYSLS
Trigger: TGAGAGTGAATATAAGTCTAAATGCTGCTTTGTATAATTTGTTCAGCTAAGGGATAGATCGATCACACTATTTAAGTGAGCCCAGATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR GCA 90 bp TTGGTTTTTAAACCGAGTTTCACCTCAGCTCTTCTTATTAATTACTaGTCTGATATACTCAATCTCACATTTTCAGGTTCTCAACCTTTG +
Preference number: 1 (lower is better)
Translates to: LVFKPSFTSALLINY*SDILNLTFSGSQPL
Trigger: CAAAGGTTGAGAACCTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGGTGAAACTCGGTTTAAAAACCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR CAA 90 bp GCTAAAACCAAGCTAAATAAACAGGATAATACGTTACTGAGTCTCTaGAGTCCAAAGTGGTGTCAGATATTGGGTTTGCCAGAGCTACTA +
Preference number: 2 (lower is better)
Translates to: AKTKLNKQDNTLLSL*SPKWCQILGLPELL
Trigger: TAGTAGCTCTGGCAAACCCAATATCTGACACCACTTTGGACTCAAGAGACTCAGTAACGTATTATCCTGTTTATTTAGCTTGGTTTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR-3UTR CCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATCATTTGGAAAGCAAGTaGGTTCTCCCTCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNHLESK*VLPPPK
Trigger: TTTGGGAGGAGGGAGAACCCACTTGCTTTCCAAATG...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR CAA 90 bp AATATGAGTGAGTTAACAATACCTTACATTATCCATCTAAGGGATTaGTGCCTTAGAAGGATTCTTTCTGAGGAAAGGCAAAGGAGGACT +
Preference number: 2 (lower is better)
Translates to: NMSELTIPYIIHLRD*CLRRILSEERQRRT
Trigger: AGTCCTCCTTTGCCTTTCCTCAGAAAGAATCCTTCTAAGGCACAAATCCCTTAGATGGATAATGTAAGGTATTGTTAACTCACTCATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATCATCTAAGGGATTTGTaGCTTAGAAGGATTCTTTCT +
Preference number: 2 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNHLRDL*LRRILS
Trigger: AGAAAGAATCCTTCTAAGGCACAAATCCCTTAGATG...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR TCA 72 bp AAGGAGGACTCAAACATCTTCACATGGTCATTAGAATaGAATCCCATGGATCACAGCCTCTACCTAGCAATG +
Preference number: 3 (lower is better)
Translates to: KEDSNIFTWSLE*NPMDHSLYLAM
Trigger: CATTGCTAGGTAGAGGCTGTGATCCATGGGATTTCATTCTAATGACCATGTGAAGATGTTTGAGTCCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR-3UTR CAA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAATCCATCTAAGGGATTaGTGCCTTAGAAGGATTCTT +
Preference number: 3 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLIHLRD*CLRRIL
Trigger: AAGAATCCTTCTAAGGCACAAATCCCTTAGATGGAT...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCAGAGCAGCACCGGACTaGTACGGGCCGTGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLRAAPD*YGPWRA
Trigger: GGCGCGCCACGGCCCGTAGCAGTCCGGTGCTGCTCT...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCCCGTCGGGCTCGCAATaGCAGTGTGTGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLPSGSQ*QCVGQP
Trigger: GGGCTGCCCCACACACTGTCATTGCGAGCCCGACGG...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCCCTTCGGAGCAGCCCTaGCTGCAGCGGCGACAGTGG +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLPSEQP*LQRRQW
Trigger: CCACTGTCGCCGCTGCAGCCAGGGCTGCTCCGAAGG...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACAGACGCCGCGTTCCTaGCCCCACGGCGTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLQTPRS*PHGVGG
Trigger: GCCGCCCACGCCGTGGGGTCAGGAACGCGGCGTCTG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCCCAGGAAGCGGAGACTaGGCAGGGGATTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLPGSGD*AGDSGA
Trigger: TGCTCCCGAATCCCCTGCCCAGTCTCCGCTTCCTGG...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATGGCGGTGCGCCTTGCTaGTGCTCGCGGCCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNGGAPC*CSRPER
Trigger: CCGCTCAGGCCGCGAGCAGCAGCAAGGCGCACCGCC...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACCTGACCCCACGGCGTaGGCGGCGAGGAGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLPDPTA*AARRSA
Trigger: CGCGCTTCTCCTCGCCGCCCACGCCGTGGGGTCAGG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGACGGCGACAGTGGCGGTaGGCCTTGCTGCTGCTCGCG +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERRRQWR*ALLLLA
Trigger: CGCGAGCAGCAGCAAGGCGCACCGCCACTGTCGCCG...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGACAGAGGTGCCGGTTaGCGCCACGCCGGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQDRGAG*RHAGLR
Trigger: CCGAAGGCCGGCGTGGCGGCAACCGGCACCTCTGTC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCTCATCCAGCCACAGGTaGCTCAGGGAATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLSSSHR*LRECRP
Trigger: TGGCCTGCATTCCCTGAGGCACCTGTGGCTGGATGA...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACCGGGCGCCGCTCCGTaGGCTTCTGCAACTCAGCGG +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLPGAAP*ASATQR
Trigger: CCGCTGAGTTGCAGAAGCCCACGGAGCGGCGCCCGG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCCGCAATGACAGTGTGTaGGGCAGCCCCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLRNDSV*GSPSAT
Trigger: TGTTGCTGAGGGGCTGCCCCACACACTGTCATTGCG...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCCGTCGGGCTCGCAATaGCAGTGTGTGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQPSGSQ*QCVGQP
Trigger: GGGCTGCCCCACACACTGTCATTGCGAGCCCGACGG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGGTGCGCCTTGCTGCTaGTCGCGGCCTGAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLGAPCC*SRPERC
Trigger: ACACCGCTCAGGCCGCGAGCAGCAGCAAGGCGCACC...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATAGTGGCGGTGCGCCTTaGTGCTGCTCGCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNSGGAP*CCSRPE
Trigger: CTCAGGCCGCGAGCAGCAGCAAGGCGCACCGCCACT...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACTGCAGCGGCGACAGTaGCGGTGCGCCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLLQRRQ*RCALLL
Trigger: CAGCAGCAAGGCGCACCGCCACTGTCGCCGCTGCAG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCGGAGCAGTCCACCCTaGGCAACATCCTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQRSSPP*ATSCRR
Trigger: CCGACGGCAGGATGTTGCTCAGGGTGGACTGCTCCG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAACTCAGCGGGCGTCTaGAGCGCCAGACGCCGCGTT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQNSAGV*SARRRV
Trigger: AACGCGGCGTCTGGCGCTGCAGACGCCCGCTGAGTT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGACGCTCCGTGGGCTTCTaGAACTCAGCGGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERRSVGF*NSAGVC
Trigger: GCAGACGCCCGCTGAGTTGCAGAAGCCCACGGAGCG...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCAGGTGCCTCAGGGAATaGAGGCCACTGAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLRCLRE*RPLKQL
Trigger: AAGCTGTTTCAGTGGCCTGCATTCCCTGAGGCACCT...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGCAACACACCAGACCTaGGAGAGCTGCCCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLATHQT*ESCPRS
Trigger: CGACCGGGGGCAGCTCTCCCAGGTCTGGTGTGTTGC...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGGGGAACTGCGGCCATaGTCAAGGCCAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLGELRP*SRPAGH
Trigger: GTGCCCTGCTGGCCTTGACCATGGCCGCAGTTCCCC...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGGGAACTGCGGCCATaGTCAAGGCCAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQGELRP*SRPAGH
Trigger: GTGCCCTGCTGGCCTTGACCATGGCCGCAGTTCCCC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCGCCACAGAGGAAAGATaGCAGCTCTCAGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLATEER*QLSVTG
Trigger: TCCAGTGACTGAGAGCTGCCATCTTTCCTCTGTGGC...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCTGTAGAGAAGGGGATTaGGACATGCAGGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLCREGD*DMQEVG
Trigger: TCCCACTTCCTGCATGTCTCAATCCCCTTCTCTACA...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCAGGCTTCGCAAATTCTaGAGAGCTTCTGTGGGTACG +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLRLRKF*RASVGT
Trigger: CGTACCCACAGAAGCTCTGCAGAATTTGCGAAGCCT...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGGGAGGCGCCATACTTaGTGCCACCCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLGRRHT*CHPAGE
Trigger: TTCCCCTGCTGGGTGGCAGCAAGTATGGCGCCTCCC...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGGAGGCGCCATACTTaGTGCCACCCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQGRRHT*CHPAGE
Trigger: TTCCCCTGCTGGGTGGCAGCAAGTATGGCGCCTCCC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCCAGGAAGCGGAGACTaGGCAGGGGATTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQPGSGD*AGDSGA
Trigger: TGCTCCCGAATCCCCTGCCCAGTCTCCGCTTCCTGG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGAAGGCGCCATACTTGCTaGCACCCAGCAGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERRRHTC*HPAGEL
Trigger: CAGTTCCCCTGCTGGGTGGCAGCAAGTATGGCGCCT...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAGGCGCCATACTTGCTaGCACCCAGCAGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQRRHTC*HPAGEL
Trigger: CAGTTCCCCTGCTGGGTGGCAGCAAGTATGGCGCCT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATGGGAATGCAGGCCACTaGAACAGCTTGGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNGNAGH*NSLGAH
Trigger: ATGTGCCCCCAAGCTGTTTCAGTGGCCTGCATTCCC...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGGAATGCAGGCCACTaGAACAGCTTGGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQGNAGH*NSLGAH
Trigger: ATGTGCCCCCAAGCTGTTTCAGTGGCCTGCATTCCC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR TCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACACTGGAGACTCCCGTaGGCATGTTCACTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLHWRLP*ACSLLR
Trigger: TCGCAGCAGTGAACATGCTCACGGGAGTCTCCAGTG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCACTGGAGACTCCCGTaGGCATGTTCACTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQHWRLP*ACSLLR
Trigger: TCGCAGCAGTGAACATGCTCACGGGAGTCTCCAGTG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACACTGGATAAGCTGGTaGTGGCACGGAACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLHWISW*WHGTGR
Trigger: CCTCCCAGTTCCGTGCCATCACCAGCTTATCCAGTG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCACTGGATAAGCTGGTaGTGGCACGGAACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQHWISW*WHGTGR
Trigger: CCTCCCAGTTCCGTGCCATCACCAGCTTATCCAGTG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTCATCCAGCCACAGGTaGCTCAGGGAATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQSSSHR*LRECRP
Trigger: TGGCCTGCATTCCCTGAGGCACCTGTGGCTGGATGA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR GCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCGCCAAGGTCATGGCTTaGAATGCCGATAAACTTCTA +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLAKVMA*NADKLL
Trigger: TAGAAGTTTATCGGCATTGCAAGCCATGACCTTGGC...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCCGGAGGCTAAGCAACTaGTGGAAAGTGTCAACTTTA +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLRRLSN*WKVSTL
Trigger: TAAAGTTGACACTTTCCAGCAGTTGCTTAGCCTCCG...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCGAAGGTCGTCCATACTaGTGTTGTCACCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLEGRPY*CCHLYS
Trigger: GGAATAAAGGTGACAACAGCAGTATGGACGACCTTC...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATCCCACGCTCCAGGGCTaGCAGAGTAAGCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNPTLQG*QSKQEN
Trigger: GTTTTCCTGCTTACTCTGGCAGCCCTGGAGCGTGGG...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCCCACGCTCCAGGGCTaGCAGAGTAAGCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQPTLQG*QSKQEN
Trigger: GTTTTCCTGCTTACTCTGGCAGCCCTGGAGCGTGGG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATCCATGTAGCCCATGGTaGTGGGCTCCCCAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNPCSPW*WAPQKA
Trigger: TGCCTTTTGGGGAGCCCAGCACCATGGGCTACATGG...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCCATGTAGCCCATGGTaGTGGGCTCCCCAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQPCSPW*WAPQKA
Trigger: TGCCTTTTGGGGAGCCCAGCACCATGGGCTACATGG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCGCAATGACAGTGTGTaGGGCAGCCCCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQRNDSV*GSPSAT
Trigger: TGTTGCTGAGGGGCTGCCCCACACACTGTCATTGCG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCGTAGAACTACCAAGCTaGAGAGGTTTCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLVELPS*RGFQRH
Trigger: ATGCCTTTGGAAACCTCTCCAGCTTGGTAGTTCTAC...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTGTAGCCCATGGTGCTaGGCTCCCCAAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNCSPWC*APQKAK
Trigger: CTTTGCCTTTTGGGGAGCCCAGCACCATGGGCTACA...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTGTAGCCCATGGTGCTaGGCTCCCCAAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQCSPWC*APQKAK
Trigger: CTTTGCCTTTTGGGGAGCCCAGCACCATGGGCTACA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTCCAGACGCAGGGATTaGAGGCTTCGCAAATTCTGC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQSRRRD*RLRKFC
Trigger: GCAGAATTTGCGAAGCCTTCAATCCCTGCGTCTGGA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCAAAGCTGCCAAAAGTaGACGCATCCACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQQSCQK*THPHQP
Trigger: TGGCTGGTGTGGATGCGTTCACTTTTGGCAGCTTTG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAGGTGCCTCAGGGAATaGAGGCCACTGAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQRCLRE*RPLKQL
Trigger: AAGCTGTTTCAGTGGCCTGCATTCCCTGAGGCACCT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR CCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGCCACTGAAACAGCTTaGGGGCACATAGCTGATGTG +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLATETA*GHIADV
Trigger: CACATCAGCTATGTGCCCCCAAGCTGTTTCAGTGGC...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGCCACTGAAACAGCTTaGGGGCACATAGCTGATGTG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQATETA*GHIADV
Trigger: CACATCAGCTATGTGCCCCCAAGCTGTTTCAGTGGC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGCCACAGAGGAAAGATaGCAGCTCTCAGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQATEER*QLSVTG
Trigger: TCCAGTGACTGAGAGCTGCCATCTTTCCTCTGTGGC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATGGATTCGGGAGCAGCTaGCTGATGTTGTTCATACTG +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNGFGSS*LMLFIL
Trigger: CAGTATGAACAACATCAGTCAGCTGCTCCCGAATCC...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATGACTGTAAAGGCCAGTaGATGCTCCCTTGGGAATGT +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNDCKGQ*MLPWEC
Trigger: ACATTCCCAAGGGAGCATTCACTGGCCTTTACAGTC...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGACTGTAAAGGCCAGTaGATGCTCCCTTGGGAATGT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQDCKGQ*MLPWEC
Trigger: ACATTCCCAAGGGAGCATTCACTGGCCTTTACAGTC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATGAACACTGCACTGAATaGAGGGCTTTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNEHCTE*RAFRSS
Trigger: GGAAGACCTGAAAGCCCTTCATTCAGTGCAGTGTTC...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGAACACTGCACTGAATaGAGGGCTTTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQEHCTE*RAFRSS
Trigger: GGAAGACCTGAAAGCCCTTCATTCAGTGCAGTGTTC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTGTAGAGAAGGGGATTaGGACATGCAGGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQCREGD*DMQEVG
Trigger: TCCCACTTCCTGCATGTCTCAATCCCCTTCTCTACA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCGATCTATCCCTTAGCTaGACAAATTATACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLDLSLS*TNYTKQ
Trigger: CTGCTTTGTATAATTTGTTCAGCTAAGGGATAGATC...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAGGCTTCGCAAATTCTaGAGAGCTTCTGTGGGTACG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQRLRKF*RASVGT
Trigger: CGTACCCACAGAAGCTCTGCAGAATTTGCGAAGCCT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATCCAGGCACCATGTCGTaGAAAGCTGCCAAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNPGTMS*KAAKSE
Trigger: TTCACTTTTGGCAGCTTTGCACGACATGGTGCCTGG...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCCAGGCACCATGTCGTaGAAAGCTGCCAAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQPGTMS*KAAKSE
Trigger: TTCACTTTTGGCAGCTTTGCACGACATGGTGCCTGG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAAGGGGATTGAGACATaGAGGAAGTGGGACTACCAC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQKGIET*RKWDYH
Trigger: GTGGTAGTCCCACTTCCTGCATGTCTCAATCCCCTT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCCATCTAAGGGATTTGTaGCTTAGAAGGATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLHLRDL*LRRILS
Trigger: AGAAAGAATCCTTCTAAGGCACAAATCCCTTAGATG...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTCAGGGCCAAGGTCATaGCTTGCAATGCCGATAAAC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQSGPRS*LAMPIN
Trigger: GTTTATCGGCATTGCAAGCCATGACCTTGGCCCTGA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR CCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCTCCCAACAAACTGGATaGGATTGTCATAGAAATGTA +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLSQQTG*DCHRNV
Trigger: TACATTTCTATGACAATCCCATCCAGTTTGTTGGGA...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATGAGACATGCAGGAAGTaGGACTACCACCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNETCRK*DYHQKD
Trigger: ATCCTTCTGGTGGTAGTCCCACTTCCTGCATGTCTC...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGAGACATGCAGGAAGTaGGACTACCACCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQETCRK*DYHQKD
Trigger: ATCCTTCTGGTGGTAGTCCCACTTCCTGCATGTCTC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGACCAGCATCTTTCTTATaGAGGTCGTCCATACTGCTG +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERPASFL*RSSILL
Trigger: CAGCAGTATGGACGACCTTCATAAGAAAGATGCTGG...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCCAGCATCTTTCTTATaGAGGTCGTCCATACTGCTG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQPASFL*RSSILL
Trigger: CAGCAGTATGGACGACCTTCATAAGAAAGATGCTGG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTATTAGGATGCAGTTGGTaGAGAGCAACAGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLLGCSW*RATGQC
Trigger: ACATTGCCCTGTTGCTCTTCACCAACTGCATCCTAA...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTTAGGATGCAGTTGGTaGAGAGCAACAGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQLGCSW*RATGQC
Trigger: ACATTGCCCTGTTGCTCTTCACCAACTGCATCCTAA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACAAGCTTGGGTGTTTTaGTCTTGTCCAGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLQAWVF*SCPDVG
Trigger: ACCTACGTCTGGACAAGATCAAAACACCCAAGCTTG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCAAGCTTGGGTGTTTTaGTCTTGTCCAGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQQAWVF*SCPDVG
Trigger: ACCTACGTCTGGACAAGATCAAAACACCCAAGCTTG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGAAAGGTTACCAAGGCTTaGGTTGAGTCACAGGACTGT +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERKVTKA*VESQDC
Trigger: ACAGTCCTGTGACTCAACTCAAGCCTTGGTAACCTT...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAAGGTTACCAAGGCTTaGGTTGAGTCACAGGACTGT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQKVTKA*VESQDC
Trigger: ACAGTCCTGTGACTCAACTCAAGCCTTGGTAACCTT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGAAGCAGTTTTATCCCATaGGGGTGGAACCATCTAGTG +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERSSFIP*GWNHLV
Trigger: CACTAGATGGTTCCACCCTCATGGGATAAAACTGCT...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTGGAGATGTAGGGATTaGAGGCTTCGCAAATTCTGC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQWRCRD*RLRKFC
Trigger: GCAGAATTTGCGAAGCCTTCAATCCCTACATCTCCA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536515.5
CDS-3UTR GCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACTCCCTTGTCCAAATTaGAGTAGAGCTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLLPCPN*SRAWCR
Trigger: CCTACACCAAGCTCTACTGCAATTTGGACAAGGGAG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCTCCCTTGTCCAAATTaGAGTAGAGCTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQLPCPN*SRAWCR
Trigger: CCTACACCAAGCTCTACTGCAATTTGGACAAGGGAG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGAGACATGGGACAAATaGCACAGAGGAAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLETWDK*HRGKMA
Trigger: TGCCATCTTTCCTCTGTGGCATTTGTCCCATGTCTC...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGAGACATGGGACAAATaGCACAGAGGAAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQETWDK*HRGKMA
Trigger: TGCCATCTTTCCTCTGTGGCATTTGTCCCATGTCTC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTATCTGCAGAGCTTCTGTaGGTACGTGTCTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLSAELL*VRVLAD
Trigger: ATCAGCTAAGACACGTACCCACAGAAGCTCTGCAGA...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTCTGCAGAGCTTCTGTaGGTACGTGTCTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQSAELL*VRVLAD
Trigger: ATCAGCTAAGACACGTACCCACAGAAGCTCTGCAGA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCTGGATTCTATTGTTATaGAGATGTAGAACTACCAAG +
Preference number: 4 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLWILLL*RCRTTK
Trigger: CTTGGTAGTTCTACATCTCCATAACAATAGAATCCA...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAAGACGACAGGAGGTTaGACGATAGGTCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQKTTGG*TIGPAL
Trigger: TAAAGCTGGACCTATCGTCCAACCTCCTGTCGTCTT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGACATTTGGAAAGCAAGTaGGTTCTCCCTCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERHLESK*VLPPPK
Trigger: TTTGGGAGGAGGGAGAACCCACTTGCTTTCCAAATG...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTACCAAGGCTTGAGTTaGGTCACAGGACTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQYQGLS*VTGLFF
Trigger: GAAAAACAGTCCTGTGACTCAACTCAAGCCTTGGTA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGTAAAGGCCAGTGAATaGTCCCTTGGGAATGTATGT +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLVKASE*SLGNVC
Trigger: ACATACATTCCCAAGGGAGCATTCACTGGCCTTTAC...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGTAAAGGCCAGTGAATaGTCCCTTGGGAATGTATGT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQVKASE*SLGNVC
Trigger: ACATACATTCCCAAGGGAGCATTCACTGGCCTTTAC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGCCAAGGTCATGGCTTaGAATGCCGATAAACTTCTA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQAKVMA*NADKLL
Trigger: TAGAAGTTTATCGGCATTGCAAGCCATGACCTTGGC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGAGAGTGTCCTAATTaGAGTGGGGAATTCATCAAG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQGECPN*SGEFIK
Trigger: CTTGATGAATTCCCCACTGCAATTAGGACACTCTCC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATAGGGTTGCCTACAAATaGTTTCTCAGGTATCGACCT +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNRVAYK*FLRYRP
Trigger: AGGTCGATACCTGAGAAAGCATTTGTAGGCAACCCT...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAGGGTTGCCTACAAATaGTTTCTCAGGTATCGACCT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQRVAYK*FLRYRP
Trigger: AGGTCGATACCTGAGAAAGCATTTGTAGGCAACCCT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000536515.5
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCGGAGGCTAAGCAACTaGTGGAAAGTGTCAACTTTA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQRRLSN*WKVSTL
Trigger: TAAAGTTGACACTTTCCAGCAGTTGCTTAGCCTCCG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGAAGGTCGTCCATACTaGTGTTGTCACCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQEGRPY*CCHLYS
Trigger: GGAATAAAGGTGACAACAGCAGTATGGACGACCTTC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGAAGTAAGTGCCAGAACTaGTATGGTCCACACTCCAAT +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERSKCQN*YGPHSN
Trigger: ATTGGAGTGTGGACCATAGCAGTTCTGGCACTTACT...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAGTAAGTGCCAGAACTaGTATGGTCCACACTCCAAT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQSKCQN*YGPHSN
Trigger: ATTGGAGTGTGGACCATAGCAGTTCTGGCACTTACT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGATCCAGGTATGTTCATTaGTGGCAGTGGAATTCCCTT +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERSRYVH*WQWNSL
Trigger: AAGGGAATTCCACTGCCAGCAATGAACATACCTGGA...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGTAGAACTACCAAGCTaGAGAGGTTTCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQVELPS*RGFQRH
Trigger: ATGCCTTTGGAAACCTCTCCAGCTTGGTAGTTCTAC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR CCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGAGTTCATTGCTGGCAGTaGAATTCCCTTCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERVHCWQ*NSLLSF
Trigger: AAAGCTCAGAAGGGAATTCCACTGCCAGCAATGAAC...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATAGGTATGTTCATTGCTaGCAGTGGAATTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNRYVHC*QWNSLL
Trigger: CAGAAGGGAATTCCACTGCCAGCAATGAACATACCT...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGGTACGTGTCTTAGCTaGTTATTCTGCAGCATAAGA +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLGTCLS*LFCSIR
Trigger: TCTTATGCTGCAGAATAATCAGCTAAGACACGTACC...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGTACGTGTCTTAGCTaGTTATTCTGCAGCATAAGA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQGTCLS*LFCSIR
Trigger: TCTTATGCTGCAGAATAATCAGCTAAGACACGTACC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGAACATGGTCATTAGAATaGAATCCCATGGATCACAGC +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERTWSLE*NPMDHS
Trigger: GCTGTGATCCATGGGATTTCATTCTAATGACCATGT...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATAGCATTACAAGTAAGTaGCAGAACTGCTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNSITSK*QNCYGP
Trigger: TGGACCATAGCAGTTCTGGCACTTACTTGTAATGCT...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAGCATTACAAGTAAGTaGCAGAACTGCTATGGTCCA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQSITSK*QNCYGP
Trigger: TGGACCATAGCAGTTCTGGCACTTACTTGTAATGCT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATGACATACGTCACCTGTaGATGATTGCCTTAGTAACA +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNDIRHL*MIALVT
Trigger: TGTTACTAAGGCAATCATGCACAGGTGACGTATGTC...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGGGATGGCAAAGTaGAAAATGCATTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNLGMAK*KMHWGE
Trigger: TTCACCCCAATGCATTTTCCACTTTGCCATCCCTAA...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTTAGGGATGGCAAAGTaGAAAATGCATTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQLGMAK*KMHWGE
Trigger: TTCACCCCAATGCATTTTCCACTTTGCCATCCCTAA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGAAATTGCAGTAGAGCTTaGTGTAGGCAATGGTCATCA +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERNCSRA*CRQWSS
Trigger: TGATGACCATTGCCTACACCAAGCTCTACTGCAATT...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAATTGCAGTAGAGCTTaGTGTAGGCAATGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQNCSRA*CRQWSS
Trigger: TGATGACCATTGCCTACACCAAGCTCTACTGCAATT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCTCTTGAGTCCAAAGTaGTGTCAGATATTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQLLSPK*CQILGL
Trigger: CAAACCCAATATCTGACACCACTTTGGACTCAAGAG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGAGTTCCTAACATCAAGTaGGTTATCCAGAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERVPNIK*VIQREH
Trigger: GTGTTCTCTCTGGATAACCCACTTGATGTTAGGAAC...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
3UTR CAA 72 bp GAGTTAACAATACCTTACATTATCCATCTAAGGGATTaGTGCCTTAGAAGGATTCTTTCTGAGGAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ELTIPYIIHLRD*CLRRILSEERQ
Trigger: TTGCCTTTCCTCAGAAAGAATCCTTCTAAGGCACAAATCCCTTAGATGGATAATGTAAGGTATTGTTAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTCTCAGGTATCGACCTaGTATTGTTGCTATGAAATC +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNSQVST*YCCYEI
Trigger: GATTTCATAGCAACAATATCAGGTCGATACCTGAGA...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTCTCAGGTATCGACCTaGTATTGTTGCTATGAAATC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQSQVST*YCCYEI
Trigger: GATTTCATAGCAACAATATCAGGTCGATACCTGAGA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000536515.5
CDS-3UTR TCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACTTAGGTCAATTTTCTaGAGCTTTTGGCAGACTGAA +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLLRSIF*SFWQTE
Trigger: TTCAGTCTGCCAAAAGCTTCAGAAAATTGACCTAAG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCTTAGGTCAATTTTCTaGAGCTTTTGGCAGACTGAA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQLRSIF*SFWQTE
Trigger: TTCAGTCTGCCAAAAGCTTCAGAAAATTGACCTAAG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTAGGATCTGAAAACTGTTaGAGTCACCAAAGCATTACA +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLGSENC*SHQSIT
Trigger: TGTAATGCTTTGGTGACTTCAACAGTTTTCAGATCC...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGATCTGAAAACTGTTaGAGTCACCAAAGCATTACA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQGSENC*SHQSIT
Trigger: TGTAATGCTTTGGTGACTTCAACAGTTTTCAGATCC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR GCA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTGGCAAAGTGGAAAATaGATTGGGGTGAATAATAGC +
Preference number: 4 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNWQSGK*IGVNNS
Trigger: GCTATTATTCACCCCAATGCATTTTCCACTTTGCCA...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR GCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTGGCAAAGTGGAAAATaGATTGGGGTGAATAATAGC +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQWQSGK*IGVNNS
Trigger: GCTATTATTCACCCCAATGCATTTTCCACTTTGCCA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR TCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACAGGTTCTCAACCTTTaGAAACATTTTCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLQVLNL*KHFPSH
Trigger: ATGTGAAGGAAAATGTTTTCAAAGGTTGAGAACCTG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR TCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCAGGTTCTCAACCTTTaGAAACATTTTCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQQVLNL*KHFPSH
Trigger: ATGTGAAGGAAAATGTTTTCAAAGGTTGAGAACCTG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTCCCAACAAACTGGATaGGATTGTCATAGAAATGTA +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQSQQTG*DCHRNV
Trigger: TACATTTCTATGACAATCCCATCCAGTTTGTTGGGA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CCA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTATTAAATAAACCCATTTaGAAAGCAAGTGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLLNKPI*KASGFS
Trigger: GGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAA...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGATACCTAACAGCCATTTaGTTTGGATGTATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERYLTAI*FGCIEA
Trigger: AGCTTCAATACATCCAAACCAAATGGCTGTTAGGTA...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CCA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTGGATTCTATTGTTATaGAGATGTAGAACTACCAAG +
Preference number: 4 (lower is better)
Translates to: PQLFLLITALIYSISHFQWILLL*RCRTTK
Trigger: CTTGGTAGTTCTACATCTCCATAACAATAGAATCCA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS GCA 90 bp CGCGCCGGGCGCCGCTCCGTGGGCTTCTGCAACTCAGCGGGCGTCTaGAGCGCCAGACGCCGCGTTCCTGACCCCACGGCGTGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: RAGRRSVGFCNSAGV*SARRRVPDPTAWAA
Trigger: CGCCGCCCACGCCGTGGGGTCAGGAACGCGGCGTCTGGCGCTGCAGACGCCCGCTGAGTTGCAGAAGCCCACGGAGCGGCGCCCGGCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS GCA 90 bp AGTAGGGGGCCACGAGCCGGACGCGGGCGGAGAGCAGCACCGGACTaGTACGGGCCGTGGCGCGCCGGGCGCCGCTCCGTGGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SRGPRAGRGRRAAPD*YGPWRAGRRSVGFC
Trigger: GCAGAAGCCCACGGAGCGGCGCCCGGCGCGCCACGGCCCGTAGCAGTCCGGTGCTGCTCTCCGCCCGCGTCCGGCTCGTGGCCCCCTACT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS CCA 90 bp CGAGCCGGACGCGGGCGGAGAGCAGCACCGGACTGCTACGGGCCGTaGCGCGCCGGGCGCCGCTCCGTGGGCTTCTGCAACTCAGCGGGC +
Preference number: 5 (lower is better)
Translates to: RAGRGRRAAPDCYGP*RAGRRSVGFCNSAG
Trigger: GCCCGCTGAGTTGCAGAAGCCCACGGAGCGGCGCCCGGCGCGCCACGGCCCGTAGCAGTCCGGTGCTGCTCTCCGCCCGCGTCCGGCTCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS CCA 90 bp CAGCACCGGACTGCTACGGGCCGTGGCGCGCCGGGCGCCGCTCCGTaGGCTTCTGCAACTCAGCGGGCGTCTGCAGCGCCAGACGCCGCG +
Preference number: 5 (lower is better)
Translates to: QHRTATGRGAPGAAP*ASATQRASAAPDAA
Trigger: CGCGGCGTCTGGCGCTGCAGACGCCCGCTGAGTTGCAGAAGCCCACGGAGCGGCGCCCGGCGCGCCACGGCCCGTAGCAGTCCGGTGCTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS GCA 90 bp AGAGGTGCCGGTTGCCGCCACGCCGGCCTTCGGAGCAGCCCTGGCTaGAGCGGCGACAGTGGCGGTGCGCCTTGCTGCTGCTCGCGGCCT +
Preference number: 5 (lower is better)
Translates to: RGAGCRHAGLRSSPG*SGDSGGAPCCCSRP
Trigger: AGGCCGCGAGCAGCAGCAAGGCGCACCGCCACTGTCGCCGCTGCAGCCAGGGCTGCTCCGAAGGCCGGCGTGGCGGCAACCGGCACCTCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS GCA 90 bp GACTGCTACGGGCCGTGGCGCGCCGGGCGCCGCTCCGTGGGCTTCTaGAACTCAGCGGGCGTCTGCAGCGCCAGACGCCGCGTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: DCYGPWRAGRRSVGF*NSAGVCSARRRVPD
Trigger: GTCAGGAACGCGGCGTCTGGCGCTGCAGACGCCCGCTGAGTTGCAGAAGCCCACGGAGCGGCGCCCGGCGCGCCACGGCCCGTAGCAGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS CCA 90 bp GGACAGAGGTGCCGGTTGCCGCCACGCCGGCCTTCGGAGCAGCCCTaGCTGCAGCGGCGACAGTGGCGGTGCGCCTTGCTGCTGCTCGCG +
Preference number: 5 (lower is better)
Translates to: GQRCRLPPRRPSEQP*LQRRQWRCALLLLA
Trigger: CGCGAGCAGCAGCAAGGCGCACCGCCACTGTCGCCGCTGCAGCCAGGGCTGCTCCGAAGGCCGGCGTGGCGGCAACCGGCACCTCTGTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS GCA 90 bp CTCAGCAACACACCAGACCTGGGAGAGCTGCCCCCGGTCGCCAGCTaGAGCAGCACAGGCAAGGACAGGAGCACACCGAGCCGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: LSNTPDLGELPPVAS*SSTGKDRSTPSREV
Trigger: CACCTCCCGGCTCGGTGTGCTCCTGTCCTTGCCTGTGCTGCTGCAGCTGGCGACCGGGGGCAGCTCTCCCAGGTCTGGTGTGTTGCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS TCA 90 bp GGTTGGAAGGCAGCTCCGAGAGCCCCAGGTCGGAGCAGTCCACCCTaGGCAACATCCTGCCGTCGGGCTCGCAATGACAGTGTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GWKAAPRAPGRSSPP*ATSCRRARNDSVWG
Trigger: GCCCCACACACTGTCATTGCGAGCCCGACGGCAGGATGTTGCTCAGGGTGGACTGCTCCGACCTGGGGCTCTCGGAGCTGCCTTCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS GCA 90 bp CAGGCTCACCAGATCCTCCCCATTCTCCCACCAGGCACCATGTCGTaGAAAGCTGCCAAAAGTGAACGCATCCACACCAGCCAGCACGGC +
Preference number: 5 (lower is better)
Translates to: QAHQILPILPPGTMS*KAAKSERIHTSQHG
Trigger: GCCGTGCTGGCTGGTGTGGATGCGTTCACTTTTGGCAGCTTTGCACGACATGGTGCCTGGTGGGAGAATGGGGAGGATCTGGTGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550851.5
CDS GCA 90 bp AATGACATGGCAACCAACCCCATTCTCCCACCAGGCACCATGTCGTaGAAAGCTGCCAAAAGTGAACGCATCCACACCAGCCAGCACGGC +
Preference number: 5 (lower is better)
Translates to: NDMATNPILPPGTMS*KAAKSERIHTSQHG
Trigger: GCCGTGCTGGCTGGTGTGGATGCGTTCACTTTTGGCAGCTTTGCACGACATGGTGCCTGGTGGGAGAATGGGGTTGGTTGCCATGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS CCA 90 bp ATCCAGCCACAGGTGCCTCAGGGAATGCAGGCCACTGAAACAGCTTaGGGGCACATAGCTGATGTGGTTAGCATCCAGACGCAGGGATTG +
Preference number: 5 (lower is better)
Translates to: IQPQVPQGMQATETA*GHIADVVSIQTQGL
Trigger: CAATCCCTGCGTCTGGATGCTAACCACATCAGCTATGTGCCCCCAAGCTGTTTCAGTGGCCTGCATTCCCTGAGGCACCTGTGGCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS TCA 90 bp TGCCACAGAGGAAAGATGGCAGCTCTCAGTCACTGGATAAGCTGGTaGTGGCACGGAACTGGGAGGCAGGTCATAAGTGATGCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: CHRGKMAALSHWISW*WHGTGRQVISDAGA
Trigger: AGCTCCAGCATCACTTATGACCTGCCTCCCAGTTCCGTGCCATCACCAGCTTATCCAGTGACTGAGAGCTGCCATCTTTCCTCTGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS-3UTR CAA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCGGGGAGGCGCCATACTaGCTGCCACCCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLGEAPY*LPPSRG
Trigger: TCCCCTGCTGGGTGGCAGCAAGTATGGCGCCTCCCC...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS CCA 90 bp TCTGCTCTGCAAAGCCATTTGTTACCAGGATCATGTCAGAGAGCCTaGACCAAAGAGGGCAAAGGAGGCTTGACCTCCTGCAGACCTGAA +
Preference number: 5 (lower is better)
Translates to: SALQSHLLPGSCQRA*TKEGKGGLTSCRPE
Trigger: TTCAGGTCTGCAGGAGGTCAAGCCTCCTTTGCCCTCTTTGGTCCAGGCTCTCTGACATGATCCTGGTAACAAATGGCTTTGCAGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550851.5
CDS CCA 90 bp AGGGCCAAGGTCATGGCTTGCAATGCCGATAAACTTCTAAAAGCCTaGACGGGGATTTCTGTTAACGCATTGTCATCCAGCCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: RAKVMACNADKLLKA*TGISVNALSSSHRC
Trigger: GCACCTGTGGCTGGATGACAATGCGTTAACAGAAATCCCCGTCCAGGCTTTTAGAAGTTTATCGGCATTGCAAGCCATGACCTTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGACAGAGGTGCCGGTaGCCGCCACGCCGGCCTTCG +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQGQRCR*PPRRPS
Trigger: CGAAGGCCGGCGTGGCGGCAACCGGCACCTCTGTCC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS TCA 90 bp TCACAGGGTTTGAAGGGGCCTGGGGAAGGTGAACACTGCACTGAATaGAGGGCTTTCAGGTCTTCCTCAAAGTCAAGCAGGAAATCTTCA +
Preference number: 5 (lower is better)
Translates to: SQGLKGPGEGEHCTE*RAFRSSSKSSRKSS
Trigger: TGAAGATTTCCTGCTTGACTTTGAGGAAGACCTGAAAGCCCTTCATTCAGTGCAGTGTTCACCTTCCCCAGGCCCCTTCAAACCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGGGAGGCGCCATACTaGCTGCCACCCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQGEAPY*LPPSRG
Trigger: TCCCCTGCTGGGTGGCAGCAAGTATGGCGCCTCCCC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS CCA 90 bp GTCTCTAGGCTGTGGAGCCCATCAAAGCATTTCTTTCCCAGGGAGTaGATTCTATTGTTATGGAGATGTAGAACTACCAAGCTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: VSRLWSPSKHFFPRE*ILLLWRCRTTKLER
Trigger: CCTCTCCAGCTTGGTAGTTCTACATCTCCATAACAATAGAATCCACTCCCTGGGAAAGAAATGCTTTGATGGGCTCCACAGCCTAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS-3UTR CAA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCTGTCCAGACGTAGGTTaGCTTTCTCAGGCTCACCAG +
Preference number: 5 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLCPDVG*LSQAHQ
Trigger: CTGGTGAGCCTGAGAAAGCAAACCTACGTCTGGACA...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCATCCAGACGCAGGGATaGAAGGCTTCGCAAATTCTG +
Preference number: 5 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLIQTQG*KASQIL
Trigger: CAGAATTTGCGAAGCCTTCAATCCCTGCGTCTGGAT...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCATTTCTGTTAACGCATaGTCATCCAGCCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLISVNA*SSSHRC
Trigger: GCACCTGTGGCTGGATGACAATGCGTTAACAGAAAT...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCTTGGGTGTTTTGATCTaGTCCAGACGTAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLLGVLI*SRRRFA
Trigger: AGCAAACCTACGTCTGGACAAGATCAAAACACCCAA...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS TCA 90 bp AGCCTGGACCAAAGAGGGCAAAGGAGGCTTGACCTCCTGCAGACCTaGAAGGAAAAACTTTCTCCTCTTTTAAAGAGATTATTGAAATCA +
Preference number: 5 (lower is better)
Translates to: SLDQRGQRRLDLLQT*KEKLSPLLKRLLKS
Trigger: TGATTTCAATAATCTCTTTAAAAGAGGAGAAAGTTTTTCCTTTCAGGTCTGCAGGAGGTCAAGCCTCCTTTGCCCTCTTTGGTCCAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550851.5
CDS-3UTR CAA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCTTACCAAGGCTTGAGTaGAGTCACAGGACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLLPRLE*SHRTVF
Trigger: AAAAACAGTCCTGTGACTCAACTCAAGCCTTGGTAA...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS CCA 90 bp AGGATTGAACAAGATGTAGAGAAGGGGATTGAGACATGCAGGAAGTaGGACTACCACCAGAAGGATAAACTTAATTACTTCAGGACTGAT +
Preference number: 5 (lower is better)
Translates to: RIEQDVEKGIETCRK*DYHQKDKLNYFRTD
Trigger: ATCAGTCCTGAAGTAATTAAGTTTATCCTTCTGGTGGTAGTCCCACTTCCTGCATGTCTCAATCCCCTTCTCTACATCTTGTTCAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CAA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACCAGTGAATGCTCCCTaGGGAATGTATGTCAGAGCG +
Preference number: 5 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLPVNAP*GMYVRA
Trigger: CGCTCTGACATACATTCCCAAGGGAGCATTCACTGG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCCAGTGAATGCTCCCTaGGGAATGTATGTCAGAGCG +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQPVNAP*GMYVRA
Trigger: CGCTCTGACATACATTCCCAAGGGAGCATTCACTGG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTGTCCAGACGTAGGTTaGCTTTCTCAGGCTCACCAG +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQCPDVG*LSQAHQ
Trigger: CTGGTGAGCCTGAGAAAGCAAACCTACGTCTGGACA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS GCA 90 bp CTTAAAGTGAGGATTGAACAAGATGTAGAGAAGGGGATTGAGACATaGAGGAAGTGGGACTACCACCAGAAGGATAAACTTAATTACTTC +
Preference number: 5 (lower is better)
Translates to: LKVRIEQDVEKGIET*RKWDYHQKDKLNYF
Trigger: GAAGTAATTAAGTTTATCCTTCTGGTGGTAGTCCCACTTCCTGCATGTCTCAATCCCCTTCTCTACATCTTGTTCAATCCTCACTTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGATCCAGACGCAGGGATaGAAGGCTTCGCAAATTCTG +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQIQTQG*KASQIL
Trigger: CAGAATTTGCGAAGCCTTCAATCCCTGCGTCTGGAT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR CAA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATAAAGACGACAGGAGGTaGGACGATAGGTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNKDDRR*DDRSSF
Trigger: AAAGCTGGACCTATCGTCCAACCTCCTGTCGTCTTT...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAAAGACGACAGGAGGTaGGACGATAGGTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQKDDRR*DDRSSF
Trigger: AAAGCTGGACCTATCGTCCAACCTCCTGTCGTCTTT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CAA 90 bp GAGTTTGTGGGTTTAAATAAACCCATTTGGAAAGCAAGTGGGTTCTCCCTCCTCGGCATTTCTATAACCTaGAGTTCTGGAAAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: EFVGLNKPIWKASGFSLLGISIT*SSGKFS
Trigger: TGAAAACTTTCCAGAACTCAAGGTTATAGAAATGCC...GAGGAGGGAGAACCCACTTGCTTTCCAAATGGGTTTATTTAAACCCACAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACAGTTTAGGATGCAGTaGGTGAAGAGCAACAGGGCA +
Preference number: 5 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLQFRMQ*VKSNRA
Trigger: TGCCCTGTTGCTCTTCACCAACTGCATCCTAAACTG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCAGTTTAGGATGCAGTaGGTGAAGAGCAACAGGGCA +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQQFRMQ*VKSNRA
Trigger: TGCCCTGTTGCTCTTCACCAACTGCATCCTAAACTG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS GCA 90 bp GAGATTATTGAAATCATGTCTGCCATTTCACCCCTAAATGGAAGTTaGCTGTTTACACAACATTATTGCCTTACTGATACGCACAGCACT +
Preference number: 5 (lower is better)
Translates to: EIIEIMSAISPLNGS*LFTQHYCLTDTHST
Trigger: AGTGCTGTGCGTATCAGTAAGGCAATAATGTTGTGTAAACAGGCAACTTCCATTTAGGGGTGAAATGGCAGACATGATTTCAATAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550851.5
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGATTTCTGTTAACGCATaGTCATCCAGCCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQISVNA*SSSHRC
Trigger: GCACCTGTGGCTGGATGACAATGCGTTAACAGAAAT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGTATGTGGTGTATTTaGTTCAGGGCCAAGGTCATG +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQGMWCI*FRAKVM
Trigger: CATGACCTTGGCCCTGAACAAAATACACCACATACC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000540815.2
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAAGGTCACGTTCATCTaGAGCCTGAAACATTCCAGC +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQKVTFI*SLKHSS
Trigger: GCTGGAATGTTTCAGGCTCAAGATGAACGTGACCTT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CAA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGATCAAGCTTGGGTGTTTaGATCTTGTCCAGACGTAGG +
Preference number: 5 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERSSLGV*ILSRRR
Trigger: CCTACGTCTGGACAAGATCAAAACACCCAAGCTTGA...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTCAAGCTTGGGTGTTTaGATCTTGTCCAGACGTAGG +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQSSLGV*ILSRRR
Trigger: CCTACGTCTGGACAAGATCAAAACACCCAAGCTTGA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CAA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTCCAGGTATGTTCATaGCTGGCAGTGGAATTCCCT +
Preference number: 5 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNFQVCS*LAVEFP
Trigger: AGGGAATTCCACTGCCAGCAATGAACATACCTGGAA...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATACGTTACTGAGTCTCTaGAGTCCAAAGTGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNTLLSL*SPKWCQ
Trigger: CTGACACCACTTTGGACTCAAGAGACTCAGTAACGT...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGATCAGACTCTCCAGGTTaGCAGTTCCAGTTAAATCAG +
Preference number: 5 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERSDSPG*QFQLNQ
Trigger: CTGATTTAACTGGAACTGCAAACCTGGAGAGTCTGA...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTCAGACTCTCCAGGTTaGCAGTTCCAGTTAAATCAG +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQSDSPG*QFQLNQ
Trigger: CTGATTTAACTGGAACTGCAAACCTGGAGAGTCTGA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTTGGGTGTTTTGATCTaGTCCAGACGTAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQLGVLI*SRRRFA
Trigger: AGCAAACCTACGTCTGGACAAGATCAAAACACCCAA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CAA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATAAGTGGTGTCAGATATaGGGTTTGCCAGAGCTACTA +
Preference number: 5 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNKWCQI*GLPELL
Trigger: TAGTAGCTCTGGCAAACCCAATATCTGACACCACTT...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp ACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATTTACCTAGTTCTTTAAGGTaGGAGAGTGTCCTAATTGCA +
Preference number: 5 (lower is better)
Translates to: TNQIRHTSPVHDCLSNNLPSSLR*ESVLIA
Trigger: TGCAATTAGGACACTCTCCAACCTTAAAGAACTAGG...TAAATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGCCTAGTTCTTTAAGGTaGGAGAGTGTCCTAATTGCA +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQPSSLR*ESVLIA
Trigger: TGCAATTAGGACACTCTCCAACCTTAAAGAACTAGG...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000536515.5
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTTACCAAGGCTTGAGTaGAGTCACAGGACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQLPRLE*SHRTVF
Trigger: AAAAACAGTCCTGTGACTCAACTCAAGCCTTGGTAA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGAGGGAGTGGATTCTATaGTTATGGAGATGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQREWIL*LWRCRD
Trigger: ATCCCTACATCTCCATAACAATAGAATCCACTCCCT...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536515.5
CDS-3UTR CAA 90 bp AAAACAAATCAGATAAGACATACGTCACCTGTGCATGATTGCCTTAGTAACAATGTAATAAGAGAAGGGTaGCCTACAAATGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: KTNQIRHTSPVHDCLSNNVIREG*PTNAFS
Trigger: TGAGAAAGCATTTGTAGGCAACCCTTCTCTTATTAC...ATTGTTACTAAGGCAATCATGCACAGGTGACGTATGTCTTATCTGATTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGTAATAAGAGAAGGGTaGCCTACAAATGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQVIREG*PTNAFS
Trigger: TGAGAAAGCATTTGTAGGCAACCCTTCTCTTATTAC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266674.10
ENST00000536515.5
CDS-3UTR CAA 90 bp ATATTCACTCTCAAGTATCAAGAGGTTTTCAGCCTTTTCTTACTAACTGAGAGAATCCATCTAAGGGATTaGTGCCTTAGAAGGATTCTT +
Preference number: 5 (lower is better)
Translates to: IFTLKYQEVFSLFLLTERIHLRD*CLRRIL
Trigger: AAGAATCCTTCTAAGGCACAAATCCCTTAGATGGAT...TCTCTCAGTTAGTAAGAAAAGGCTGAAAACCTCTTGATACTTGAGAGTGAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGTGTAGTTCTTTAAGGTaGGAGAGTGTCCTAATTGCA +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQCSSLR*ESVLIA
Trigger: TGCAATTAGGACACTCTCCAACCTTAAAGAACTACA...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540815.2
CDS-3UTR CAA 90 bp CCTCAGCTCTTCTTATTAATTACTGCTCTGATATACTCAATCTCACATTTTCAGGGCATTTCTATAACCTaGAGTTCTGGAAAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PQLFLLITALIYSISHFQGISIT*SSGKFS
Trigger: TGAAAACTTTCCAGAACTCAAGGTTATAGAAATGCC...CTGAAAATGTGAGATTGAGTATATCAGAGCAGTAATTAATAAGAAGAGCTGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS CCA 72 bp CGCGGGCGGAGAGCAGCACCGGACTGCTACGGGCCGTaGCGCGCCGGGCGCCGCTCCGTGGGCTTCTGCAAC +
Preference number: 6 (lower is better)
Translates to: RGRRAAPDCYGP*RAGRRSVGFCN
Trigger: GTTGCAGAAGCCCACGGAGCGGCGCCCGGCGCGCCACGGCCCGTAGCAGTCCGGTGCTGCTCTCCGCCCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS TCA 72 bp CTCAGCGGGCGTCTGCAGCGCCAGACGCCGCGTTCCTaGCCCCACGGCGTGGGCGGCGAGGAGAAGCGCGGC +
Preference number: 6 (lower is better)
Translates to: LSGRLQRQTPRS*PHGVGGEEKRG
Trigger: GCCGCGCTTCTCCTCGCCGCCCACGCCGTGGGGTCAGGAACGCGGCGTCTGGCGCTGCAGACGCCCGCTGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS GCA 72 bp GGTTGCCGCCACGCCGGCCTTCGGAGCAGCCCTGGCTaGAGCGGCGACAGTGGCGGTGCGCCTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GCRHAGLRSSPG*SGDSGGAPCCC
Trigger: GCAGCAGCAAGGCGCACCGCCACTGTCGCCGCTGCAGCCAGGGCTGCTCCGAAGGCCGGCGTGGCGGCAACC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS CCA 72 bp TGCCGGTTGCCGCCACGCCGGCCTTCGGAGCAGCCCTaGCTGCAGCGGCGACAGTGGCGGTGCGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: CRLPPRRPSEQP*LQRRQWRCALL
Trigger: CAGCAAGGCGCACCGCCACTGTCGCCGCTGCAGCCAGGGCTGCTCCGAAGGCCGGCGTGGCGGCAACCGGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS CCA 72 bp ACTGCTACGGGCCGTGGCGCGCCGGGCGCCGCTCCGTaGGCTTCTGCAACTCAGCGGGCGTCTGCAGCGCCA +
Preference number: 6 (lower is better)
Translates to: TATGRGAPGAAP*ASATQRASAAP
Trigger: TGGCGCTGCAGACGCCCGCTGAGTTGCAGAAGCCCACGGAGCGGCGCCCGGCGCGCCACGGCCCGTAGCAGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS GCA 72 bp CGCCGCTCCGTGGGCTTCTGCAACTCAGCGGGCGTCTaGAGCGCCAGACGCCGCGTTCCTGACCCCACGGCG +
Preference number: 6 (lower is better)
Translates to: RRSVGFCNSAGV*SARRRVPDPTA
Trigger: CGCCGTGGGGTCAGGAACGCGGCGTCTGGCGCTGCAGACGCCCGCTGAGTTGCAGAAGCCCACGGAGCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266674.10
CDS GCA 72 bp ACACCAGACCTGGGAGAGCTGCCCCCGGTCGCCAGCTaGAGCAGCACAGGCAAGGACAGGAGCACACCGAGC +
Preference number: 6 (lower is better)
Translates to: TPDLGELPPVAS*SSTGKDRSTPS
Trigger: GCTCGGTGTGCTCCTGTCCTTGCCTGTGCTGCTGCAGCTGGCGACCGGGGGCAGCTCTCCCAGGTCTGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS TCA 72 bp GCAGCTCCGAGAGCCCCAGGTCGGAGCAGTCCACCCTaGGCAACATCCTGCCGTCGGGCTCGCAATGACAGT +
Preference number: 6 (lower is better)
Translates to: AAPRAPGRSSPP*ATSCRRARNDS
Trigger: ACTGTCATTGCGAGCCCGACGGCAGGATGTTGCTCAGGGTGGACTGCTCCGACCTGGGGCTCTCGGAGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS GCA 72 bp GCAAAGGCAGGCAGAGAGGGGAGGCGCCATACTTGCTaGCACCCAGCAGGGGAACTGCGGCCATGGTCAAGG +
Preference number: 6 (lower is better)
Translates to: AKAGREGRRHTC*HPAGELRPWSR
Trigger: CCTTGACCATGGCCGCAGTTCCCCTGCTGGGTGGCAGCAAGTATGGCGCCTCCCCTCTCTGCCTGCCTTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS GCA 72 bp AAGGCAAAGGCAGGCAGAGAGGGGAGGCGCCATACTTaGTGCCACCCAGCAGGGGAACTGCGGCCATGGTCA +
Preference number: 6 (lower is better)
Translates to: KAKAGREGRRHT*CHPAGELRPWS
Trigger: TGACCATGGCCGCAGTTCCCCTGCTGGGTGGCAGCAAGTATGGCGCCTCCCCTCTCTGCCTGCCTTTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS CCA 72 bp GCAACATCCTGCCGTCGGGCTCGCAATGACAGTGTGTaGGGCAGCCCCTCAGCAACACACCAGACCTGGGAG +
Preference number: 6 (lower is better)
Translates to: ATSCRRARNDSV*GSPSATHQTWE
Trigger: CTCCCAGGTCTGGTGTGTTGCTGAGGGGCTGCCCCACACACTGTCATTGCGAGCCCGACGGCAGGATGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS TCA 72 bp CCCACCAGGCACCATGTCGTGCAAAGCTGCCAAAAGTaGACGCATCCACACCAGCCAGCACGGCACTGGAGA +
Preference number: 6 (lower is better)
Translates to: PTRHHVVQSCQK*THPHQPARHWR
Trigger: TCTCCAGTGCCGTGCTGGCTGGTGTGGATGCGTTCACTTTTGGCAGCTTTGCACGACATGGTGCCTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS GCA 72 bp GCAACCAACCCCATTCTCCCACCAGGCACCATGTCGTaGAAAGCTGCCAAAAGTGAACGCATCCACACCAGC +
Preference number: 6 (lower is better)
Translates to: ATNPILPPGTMS*KAAKSERIHTS
Trigger: GCTGGTGTGGATGCGTTCACTTTTGGCAGCTTTGCACGACATGGTGCCTGGTGGGAGAATGGGGTTGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS GCA 72 bp CAGATCCTCCCCATTCTCCCACCAGGCACCATGTCGTaGAAAGCTGCCAAAAGTGAACGCATCCACACCAGC +
Preference number: 6 (lower is better)
Translates to: QILPILPPGTMS*KAAKSERIHTS
Trigger: GCTGGTGTGGATGCGTTCACTTTTGGCAGCTTTGCACGACATGGTGCCTGGTGGGAGAATGGGGAGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550851.5
CDS CCA 72 bp CAGGTGCCTCAGGGAATGCAGGCCACTGAAACAGCTTaGGGGCACATAGCTGATGTGGTTAGCATCCAGACG +
Preference number: 6 (lower is better)
Translates to: QVPQGMQATETA*GHIADVVSIQT
Trigger: CGTCTGGATGCTAACCACATCAGCTATGTGCCCCCAAGCTGTTTCAGTGGCCTGCATTCCCTGAGGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS GCA 72 bp GGGATTTCTGTTAACGCATTGTCATCCAGCCACAGGTaGCTCAGGGAATGCAGGCCACTGAAACAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: GISVNALSSSHR*LRECRPLKQLG
Trigger: CCCAAGCTGTTTCAGTGGCCTGCATTCCCTGAGGCACCTGTGGCTGGATGACAATGCGTTAACAGAAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS TCA 72 bp GGAAAGATGGCAGCTCTCAGTCACTGGATAAGCTGGTaGTGGCACGGAACTGGGAGGCAGGTCATAAGTGAT +
Preference number: 6 (lower is better)
Translates to: GKMAALSHWISW*WHGTGRQVISD
Trigger: ATCACTTATGACCTGCCTCCCAGTTCCGTGCCATCACCAGCTTATCCAGTGACTGAGAGCTGCCATCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS TCA 72 bp GTCAGAGAGCCTGGACCAAAGAGGGCAAAGGAGGCTTaGCCTCCTGCAGACCTGAAAGGAAAAACTTTCTCC +
Preference number: 6 (lower is better)
Translates to: VREPGPKRAKEA*PPADLKGKTFS
Trigger: GGAGAAAGTTTTTCCTTTCAGGTCTGCAGGAGGTCAAGCCTCCTTTGCCCTCTTTGGTCCAGGCTCTCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550851.5
CDS CAA 90 bp GCCGATAAACTTCTAAAAGCCTGGACGGGGATTTCTGTTAACGCATaGTCATCCAGCCACAGGTGCCTCAGGGAATGCAGGCCACTGAAA +
Preference number: 6 (lower is better)
Translates to: ADKLLKAWTGISVNA*SSSHRCLRECRPLK
Trigger: TTTCAGTGGCCTGCATTCCCTGAGGCACCTGTGGCTGGATGACAATGCGTTAACAGAAATCCCCGTCCAGGCTTTTAGAAGTTTATCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS GCA 72 bp ATGTGGTGTATTTTGTTCAGGGCCAAGGTCATGGCTTaGAATGCCGATAAACTTCTAAAAGCCTGGACGGGG +
Preference number: 6 (lower is better)
Translates to: MWCILFRAKVMA*NADKLLKAWTG
Trigger: CCCCGTCCAGGCTTTTAGAAGTTTATCGGCATTGCAAGCCATGACCTTGGCCCTGAACAAAATACACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS CCA 72 bp GTCATGGCTTGCAATGCCGATAAACTTCTAAAAGCCTaGACGGGGATTTCTGTTAACGCATTGTCATCCAGC +
Preference number: 6 (lower is better)
Translates to: VMACNADKLLKA*TGISVNALSSS
Trigger: GCTGGATGACAATGCGTTAACAGAAATCCCCGTCCAGGCTTTTAGAAGTTTATCGGCATTGCAAGCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS TCA 72 bp GATGCTGGAGCTGGTAAAGGTTACCAAGGCTTGAGTTaGGTCACAGGACTGTTTTTCGACATCATCAGAGTT +
Preference number: 6 (lower is better)
Translates to: DAGAGKGYQGLS*VTGLFFDIIRV
Trigger: AACTCTGATGATGTCGAAAAACAGTCCTGTGACTCAACTCAAGCCTTGGTAACCTTTACCAGCTCCAGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS CAA 72 bp CCATCAAAGCATTTCTTTCCCAGGGAGTGGATTCTATaGTTATGGAGATGTAGAACTACCAAGCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: PSKHFFPREWIL*LWRCRTTKLER
Trigger: CCTCTCCAGCTTGGTAGTTCTACATCTCCATAACAATAGAATCCACTCCCTGGGAAAGAAATGCTTTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS GCA 72 bp CCCCTAAATGGAAGTTGCCTGTTTACACAACATTATTaGCTTACTGATACGCACAGCACTTGGAGATTAGGT +
Preference number: 6 (lower is better)
Translates to: PLNGSCLFTQHY*LTDTHSTWRLG
Trigger: ACCTAATCTCCAAGTGCTGTGCGTATCAGTAAGGCAATAATGTTGTGTAAACAGGCAACTTCCATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550851.5
CDS CCA 72 bp GGATTCTATTGTTATGGAGATGTAGAACTACCAAGCTaGAGAGGTTTCCAAAGGCATAGTCTGGTATGTGGT +
Preference number: 6 (lower is better)
Translates to: GFYCYGDVELPS*RGFQRHSLVCG
Trigger: ACCACATACCAGACTATGCCTTTGGAAACCTCTCCAGCTTGGTAGTTCTACATCTCCATAACAATAGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000540815.2
ENST00000550851.5
CDS CCA 72 bp CAAGATGTAGAGAAGGGGATTGAGACATGCAGGAAGTaGGACTACCACCAGAAGGATAAACTTAATTACTTC +
Preference number: 6 (lower is better)
Translates to: QDVEKGIETCRK*DYHQKDKLNYF
Trigger: GAAGTAATTAAGTTTATCCTTCTGGTGGTAGTCCCACTTCCTGCATGTCTCAATCCCCTTCTCTACATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
CDS TCA 72 bp CCATTCAGAGTCAGTGTTCTTAGTTCAGGTAAATGTTaGAAAGCAGATCTCCCAACAAACTGGATGGGATTG +
Preference number: 6 (lower is better)
Translates to: PFRVSVLSSGKC*KADLPTNWMGL
Trigger: CAATCCCATCCAGTTTGTTGGGAGATCTGCTTTTCAACATTTACCTGAACTAAGAACACTGACTCTGAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS CAA 90 bp TTTCTTATGAAGGTCGTCCATACTGCTGTTGTCACCTTTATTCCATaGATTAGAAATCTTATAGGCATTCTCACACACTCCAAATGCACA +
Preference number: 6 (lower is better)
Translates to: FLMKVVHTAVVTFIP*IRNLIGILTHSKCT
Trigger: TGTGCATTTGGAGTGTGTGAGAATGCCTATAAGATTTCTAATCAATGGAATAAAGGTGACAACAGCAGTATGGACGACCTTCATAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000540815.2
ENST00000550851.5
CDS GCA 72 bp GAAATGTATTGTAATAAGAGAAGGGTTGCCTACAAATaGTTTCTCAGGTATCGACCTGATATTGTTGCTATG +
Preference number: 6 (lower is better)
Translates to: EMYCNKRRVAYK*FLRYRPDIVAM
Trigger: CATAGCAACAATATCAGGTCGATACCTGAGAAAGCATTTGTAGGCAACCCTTCTCTTATTACAATACATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266674.10
ENST00000536515.5
ENST00000550851.5