Pregenerated sensors for LGMN (Homo sapiens)
Ensembl gene IDs: ENSG00000100600Ensembl transcript IDs: ENST00000334869.9, ENST00000393218.6, ENST00000553371.1, ENST00000553802.5, ENST00000553918.1, ENST00000554080.5, ENST00000554189.5, ENST00000554397.5, ENST00000554919.5, ENST00000555699.5, ENST00000556097.5, ENST00000556790.1, ENST00000557034.1, ENST00000557315.1, ENST00000557434.5, ENST00000557609.5, ENST00000557694.1, ENST00000557725.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATGGGGCGCTCACACTTaGAAAAGCTTCCAGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GGDCFVSILHDVAGVGVRWGAHT*KSFQEA Trigger: TGCCTCCTGGAAGCTTTTCCAAGTGTGAGCGCCCCA...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTTTACCCACCTCTCCAGTCTCTaGTCAGCACACAGTCGGTGG | + |
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Preference number: 2 (lower is better) Translates to: IVLFPYCMTWLVLVCDFTHLSSL*SAHSRW Trigger: CCACCGACTGTGTGCTGATCAGAGACTGGAGAGGTG...GGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| 3UTR-3UTR CCA 90 bp | ATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTTTACCCCATACTGCATGACGTaGCTGGTGTTGGTGTGCGAT | + |
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Preference number: 2 (lower is better) Translates to: IVLFPYCMTWLVLVCDFTPYCMT*LVLVCD Trigger: ATCGCACACCAACACCAGCCACGTCATGCAGTATGG...GGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTTTACCTGTTTCCATACTGCATaGCGTGGCTGGTGTTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: IVLFPYCMTWLVLVCDFTCFHTA*RGWCWC Trigger: ACACCAACACCAGCCACGTCATGCAGTATGGAAACA...GGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| 3UTR-3UTR TCA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTCAGGTCCTTTACATaGAGATCTTCATTGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GGDCFVSILHDVAGVGVRFRSFT*RSSLGK Trigger: TTTTCCCAATGAAGATCTTCATGTAAAGGACCTGAA...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR CCA 90 bp | TTTCATGGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTTGTGGCAGGCGACCGTaGTGGCAGTGGTGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: FHGGDCFVSILHDVAGVGCGRRP*WQWWRR Trigger: CCGCCGCCACCACTGCCACCACGGTCGCCTGCCACA...ACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACCATGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR TCA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGACACCTCTCCAGTCTCTaGTCAGCACACAGTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGDCFVSILHDVAGVGVRHLSSL*SAHSRW Trigger: CCACCGACTGTGTGCTGATCAGAGACTGGAGAGGTG...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR CCA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGAGGGGGACGGGAGAACTaGCTTTGCGTTTCATACCCT | + |
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Preference number: 4 (lower is better) Translates to: GGDCFVSILHDVAGVGVRGGREN*LCVSYP Trigger: AGGGTATGAAACGCAAAGCCAGTTCTCCCGTCCCCC...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR GCA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGAACCTTGGAGTTCAATTaGAGACACCTGTGGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: GGDCFVSILHDVAGVGVRTLEFN*RHLWQA Trigger: CGCCTGCCACAGGTGTCTGCAATTGAACTCCAAGGT...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR TCA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATGTTTCCATACTGCATaGCGTGGCTGGTGTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GGDCFVSILHDVAGVGVRCFHTA*RGWCWC Trigger: ACACCAACACCAGCCACGTCATGCAGTATGGAAACA...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR GCA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGAGGCATGGCACGCGTCTaGCTGGTGCCTATAATTATA | + |
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Preference number: 4 (lower is better) Translates to: GGDCFVSILHDVAGVGVRGMARV*LVPIII Trigger: TATAATTATAGGCACCAGGCAGACGCGTGCCATGCC...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR CCA 90 bp | TTTCATGGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTTGGGGCGCTCACACTTaGAAAAGCTTCCAGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FHGGDCFVSILHDVAGVGWGAHT*KSFQEA Trigger: TGCCTCCTGGAAGCTTTTCCAAGTGTGAGCGCCCCA...ACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACCATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR GCA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGAGTTTTGTTTCCATACTaGATGACGTGGCTGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: GGDCFVSILHDVAGVGVRVLFPY*MTWLVL Trigger: CAACACCAGCCACGTCATGCAGTATGGAAACAAAAC...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR CCA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGAAACCATTCTGCACCTTaGAGTTCAATTGCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: GGDCFVSILHDVAGVGVRNHSAP*SSIADT Trigger: GGTGTCTGCAATTGAACTCCAAGGTGCAGAATGGTT...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR CCA 90 bp | TTTCATGGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTCCATACTGCATGACGTaGCTGGTGTTGGTGTGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FHGGDCFVSILHDVAGVGPYCMT*LVLVCD Trigger: ATCGCACACCAACACCAGCCACGTCATGCAGTATGG...ACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACCATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR TCA 90 bp | ATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTTTACCGACAATTTTATCCTGTaGAGCGGATACGGCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: IVLFPYCMTWLVLVCDFTDNFIL*SGYGFS Trigger: TGAGAAGCCGTATCCGCTTCACAGGATAAAATTGTC...GGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR CCA 90 bp | ATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTTTACCTCACAATTCCTGGAGTaGGATTGTCTTCAGAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: IVLFPYCMTWLVLVCDFTSQFLE*DCLQSK Trigger: CTTACTCTGAAGACAATCCCACTCCAGGAATTGTGA...GGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR TCA 90 bp | ATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTTTACCTTCAGGTCCTTTACATaGAGATCTTCATTGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: IVLFPYCMTWLVLVCDFTFRSFT*RSSLGK Trigger: TTTTCCCAATGAAGATCTTCATGTAAAGGACCTGAA...GGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR CCA 90 bp | ATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTTTACCACTGCATCACTTTCATaGTGGAGATTGTTTTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: IVLFPYCMTWLVLVCDFTTASLS*WRLFCF Trigger: GAAACAAAACAATCTCCACCATGAAAGTGATGCAGT...GGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS TCA 90 bp | GTGGCAGGCGACCGTGGTGGCAGTGGTGGCGGCGGCGGCGGTGAGTaGCCGCGGTGGTGGCGCCGGCGGGACCGTGAGAACTCGCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VAGDRGGSGGGGGGE*PRWWRRRDRENSRR Trigger: CCGCCGCGAGTTCTCACGGTCCCGCCGGCGCCACCACCGCGGTCACTCACCGCCGCCGCCGCCACCACTGCCACCACGGTCGCCTGCCAC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000334869.9 ENST00000393218.6 ENST00000553371.1 ENST00000553802.5 ENST00000554080.5 ENST00000554189.5 ENST00000554397.5 ENST00000554919.5 ENST00000555699.5 ENST00000556097.5 ENST00000557034.1 ENST00000557315.1 ENST00000557434.5 ENST00000557609.5 ENST00000557694.1 |
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| CDS GCA 90 bp | CGCGGCGGCTCGCAGCCTCACACCAAACACCCACGACGTCGGCACTaGTGTGATTGCTGCGGGCGCCGCCGCTCCTCGCTTAAGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RGGSQPHTKHPRRRH*CDCCGRRRSSLKGH Trigger: GTGGCCCTTAAGCGAGGAGCGGCGGCGCCCGCAGCAATCACAGCAGTGCCGACGTCGTGGGTGTTTGGTGTGAGGCTGCGAGCCGCCGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393218.6 |
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| CDS GCA 90 bp | CAGCCTCACACCAAACACCCACGACGTCGGCACTGCTGTGATTGCTaGGGGCGCCGCCGCTCCTCGCTTAAGGGCCACTGTGCCGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: QPHTKHPRRRHCCDC*GRRRSSLKGHCAAV Trigger: CACCGCGGCACAGTGGCCCTTAAGCGAGGAGCGGCGGCGCCCGCAGCAATCACAGCAGTGCCGACGTCGTGGGTGTTTGGTGTGAGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393218.6 |
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| CDS GCA 90 bp | TCGCAGCCTCACACCAAACACCCACGACGTCGGCACTGCTGTGATTaGTGCGGGCGCCGCCGCTCCTCGCTTAAGGGCCACTGTGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: SQPHTKHPRRRHCCD*CGRRRSSLKGHCAA Trigger: CGCGGCACAGTGGCCCTTAAGCGAGGAGCGGCGGCGCCCGCAGCAATCACAGCAGTGCCGACGTCGTGGGTGTTTGGTGTGAGGCTGCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393218.6 |
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| CDS GCA 90 bp | AGGAGAATGCTCAGTTCCATGTCAGCGGTGTCTGAGCAACCTGCTTaGCAGCCCAGGTCGAGGCCGGCGCCCCAACCACCTACCATTGAT | + |
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Preference number: 5 (lower is better) Translates to: RRMLSSMSAVSEQPA*QPRSRPAPQPPTID Trigger: ATCAATGGTAGGTGGTTGGGGCGCCGGCCTCGACCTGGGCTGGCAAGCAGGTTGCTCAGACACCGCTGACATGGAACTGAGCATTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556097.5 |
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| CDS TCA 90 bp | CCTTCTATAAGGTCGTACAACCAATGTGACTGCCAGGGGACAATATaGATTCAGCTTCTGGATTCTGGTCATGGGGAGAGCCTGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: PSIRSYNQCDCQGTI*IQLLDSGHGESLLA Trigger: AGCCAGCAGGCTCTCCCCATGACCAGAATCCAGAAGCTGAATTCATATTGTCCCCTGGCAGTCACATTGGTTGTACGACCTTATAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557725.5 |
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| CDS TCA 90 bp | TTTCTCAGCCTGGATGGAACCTTCTATAAGGTCGTACAACCAATGTaGCTGCCAGGGGACAATATGAATTCAGCTTCTGGATTCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: FLSLDGTFYKVVQPM*LPGDNMNSASGFWS Trigger: TGACCAGAATCCAGAAGCTGAATTCATATTGTCCCCTGGCAGTCACATTGGTTGTACGACCTTATAGAAGGTTCCATCCAGGCTGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557725.5 |
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| CDS-3UTR CAA 90 bp | GGTGGAGATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGACTTTCATGGTGGAGATaGTTTTGTTTCCATACTGCA | + |
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Preference number: 5 (lower is better) Translates to: GGDCFVSILHDVAGVGVRLSWWR*FCFHTA Trigger: TGCAGTATGGAAACAAAACAATCTCCACCATGAAAG...TCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS TCA 90 bp | AGAACAACACCTGTTTCAATTCTCTATACGGGGGTCCCAAGCCATTaGGAGAAGTGTAGTATCCGTAAACAGACATTACCTCTTCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: RTTPVSILYTGVPSH*EKCSIRKQTLPLQD Trigger: GTCCTGAAGAGGTAATGTCTGTTTACGGATACTACACTTCTCTCAATGGCTTGGGACCCCCGTATAGAGAATTGAAACAGGTGTTGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557694.1 |
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| CDS-3UTR CAA 90 bp | ATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTTTACCAAACCATTCTGCACCTaGGAGTTCAATTGCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: IVLFPYCMTWLVLVCDFTKPFCT*EFNCRH Trigger: GTGTCTGCAATTGAACTCCAAGGTGCAGAATGGTTT...GGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS-3UTR CAA 90 bp | ATTGTTTTGTTTCCATACTGCATGACGTGGCTGGTGTTGGTGTGCGATTTTACCATGGTGGAGATTGTTTaGTTTCCATACTGCATGACG | + |
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Preference number: 5 (lower is better) Translates to: IVLFPYCMTWLVLVCDFTMVEIV*FPYCMT Trigger: CGTCATGCAGTATGGAAACAAAACAATCTCCACCAT...GGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557609.5 |
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| CDS GCA 72 bp | CACACCAAACACCCACGACGTCGGCACTGCTGTGATTaGTGCGGGCGCCGCCGCTCCTCGCTTAAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: HTKHPRRRHCCD*CGRRRSSLKGH Trigger: GTGGCCCTTAAGCGAGGAGCGGCGGCGCCCGCAGCAATCACAGCAGTGCCGACGTCGTGGGTGTTTGGTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393218.6 |
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| CDS GCA 72 bp | TCGCAGCCTCACACCAAACACCCACGACGTCGGCACTaGTGTGATTGCTGCGGGCGCCGCCGCTCCTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: SQPHTKHPRRRH*CDCCGRRRSSL Trigger: AAGCGAGGAGCGGCGGCGCCCGCAGCAATCACAGCAGTGCCGACGTCGTGGGTGTTTGGTGTGAGGCTGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393218.6 |
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| CDS GCA 72 bp | ACCAAACACCCACGACGTCGGCACTGCTGTGATTGCTaGGGGCGCCGCCGCTCCTCGCTTAAGGGCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: TKHPRRRHCCDC*GRRRSSLKGHC Trigger: ACAGTGGCCCTTAAGCGAGGAGCGGCGGCGCCCGCAGCAATCACAGCAGTGCCGACGTCGTGGGTGTTTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393218.6 |
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| CDS GCA 72 bp | CTCAGTTCCATGTCAGCGGTGTCTGAGCAACCTGCTTaGCAGCCCAGGTCGAGGCCGGCGCCCCAACCACCT | + |
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Preference number: 6 (lower is better) Translates to: LSSMSAVSEQPA*QPRSRPAPQPP Trigger: AGGTGGTTGGGGCGCCGGCCTCGACCTGGGCTGGCAAGCAGGTTGCTCAGACACCGCTGACATGGAACTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556097.5 |
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| CDS CAA 72 bp | AGCCCAGGTCGAGGCCGGCGCCCCAACCACCTACCATaGATGTTATCCGGCAGGTGGTTCATCATGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: SPGRGRRPNHLP*MLSGRWFIMDP Trigger: TGGGTCCATGATGAACCACCTGCCGGATAACATCAATGGTAGGTGGTTGGGGCGCCGGCCTCGACCTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556097.5 |
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| CDS CCA 72 bp | GCCCGGGAAGTCAAGGCTATAGTGAACCATCCGGCCTaGGTGAGAGAGCGAGACCTCTGTCCTCTGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: AREVKAIVNHPA*VRERDLCPLSV Trigger: CACAGACAGAGGACAGAGGTCTCGCTCTCTCACCCAGGCCGGATGGTTCACTATAGCCTTGACTTCCCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553918.1 |
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| CDS TCA 72 bp | ATAAAGGAGAATGCTCAGTTCCATGTCAGCGGTGTCTaGGCAACCTGCTTGCCAGCCCAGGTCGAGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: IKENAQFHVSGV*ATCLPAQVEAG Trigger: GCCGGCCTCGACCTGGGCTGGCAAGCAGGTTGCTCAGACACCGCTGACATGGAACTGAGCATTCTCCTTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556097.5 |
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| CDS GCA 72 bp | TGCCTCAGGGGCTCCGCTGGCAGTGGGACATCCCTGTaGTATGATCCCCAGACAAGGAACGAGGAGTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: CLRGSAGSGTSL*YDPQTRNEEFK Trigger: CTTAAACTCCTCGTTCCTTGTCTGGGGATCATAGCACAGGGATGTCCCACTGCCAGCGGAGCCCCTGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557694.1 |
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| CDS CCA 72 bp | AATGTGACTGCCAGGGGACAATATGAATTCAGCTTCTaGATTCTGGTCATGGGGAGAGCCTGCTGGCTCACC | + |
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Preference number: 6 (lower is better) Translates to: NVTARGQYEFSF*ILVMGRACWLT Trigger: GGTGAGCCAGCAGGCTCTCCCCATGACCAGAATCCAGAAGCTGAATTCATATTGTCCCCTGGCAGTCACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557725.5 |
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| CDS CAA 72 bp | CCTCATCTCACCACACAATCCACTCCACTTTTGCAATaGCAGAGGGGAAGCATCTTGACCAGTGGCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PHLTTQSTPLLQ*QRGSILTSGSC Trigger: GCAAGAGCCACTGGTCAAGATGCTTCCCCTCTGCAATTGCAAAAGTGGAGTGGATTGTGTGGTGAGATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556790.1 |
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| CDS CAA 72 bp | GCAATTGCAGAGGGGAAGCATCTTGACCAGTGGCTCTaGCCCTATTTTGGTTCATGGATCCTTTCCCAACCT | + |
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Preference number: 6 (lower is better) Translates to: AIAEGKHLDQWL*PYFGSWILSQP Trigger: AGGTTGGGAAAGGATCCATGAACCAAAATAGGGCAAGAGCCACTGGTCAAGATGCTTCCCCTCTGCAATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556790.1 |
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| CDS GCA 72 bp | CAATTGCAGAGGGGAAGCATCTTGACCAGTGGCTCTTaGCCTATTTTGGTTCATGGATCCTTTCCCAACCTT | + |
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Preference number: 6 (lower is better) Translates to: QLQRGSILTSGS*PILVHGSFPNL Trigger: AAGGTTGGGAAAGGATCCATGAACCAAAATAGGGCAAGAGCCACTGGTCAAGATGCTTCCCCTCTGCAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556790.1 |
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| CDS TCA 72 bp | CCTGTTTCAATTCTCTATACGGGGGTCCCAAGCCATTaGGAGAAGTGTAGTATCCGTAAACAGACATTACCT | + |
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Preference number: 6 (lower is better) Translates to: PVSILYTGVPSH*EKCSIRKQTLP Trigger: AGGTAATGTCTGTTTACGGATACTACACTTCTCTCAATGGCTTGGGACCCCCGTATAGAGAATTGAAACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557694.1 |
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| CDS TCA 72 bp | CATTTTATTAATAATGAGGGGCCCTGGATCATAAGGTaGATTCAGTGCAGAAATGGGCCACCAAGAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: HFINNEGPWIIR*IQCRNGPPREA Trigger: GGCTTCTCTTGGTGGCCCATTTCTGCACTGAATTCACCTTATGATCCAGGGCCCCTCATTATTAATAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557694.1 |
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