RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LGI3 (Homo sapiens)

Ensembl gene IDs: ENSG00000168481

Ensembl transcript IDs: ENST00000306317.7, ENST00000424267.6, ENST00000517694.1, ENST00000518365.1, ENST00000520124.5

Found 440 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGTGGGGCCAGGGCTGCAACACGCCCTCAGGCCAAGCTCCACTCTaGGCACCCTCGCAGGTAACTCAGGTGCTTGCAGCTCGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: WWGQGCNTPSGQAPL*APSQVTQVLAARPA
Trigger: AGCTGGCCGAGCTGCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGCGTGTTGCAGCCCTGGCCCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 90 bp AGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTaGAGCTCGGCCAGCTCTCTAATCCACCCAAGGAGCCCGCCCAGC +
Preference number: 1 (lower is better)
Translates to: RPSSTLGTLAGNSGA*SSASSLIHPRSPPS
Trigger: GCTGGGCGGGCTCCTTGGGTGGATTAGAGAGCTGGCCGAGCTGCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 90 bp AACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATTaGAGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGC +
Preference number: 1 (lower is better)
Translates to: NWALGVPGVPGVHAD*SDDARPPGPVHGVR
Trigger: GCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACTGCAATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR TCA 90 bp CCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGGGTaGACCAGGGGACAGTCCAAGCCTGAGAAAGCGACAGCTACAGGA +
Preference number: 1 (lower is better)
Translates to: PKEPAQLKGHIPKTG*TRGQSKPEKATATG
Trigger: TCCTGTAGCTGTCGCTTTCTCAGGCTTGGACTGTCCCCTGGTTCACCCTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 90 bp CCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGGGCGTGTaGGGATACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACA +
Preference number: 1 (lower is better)
Translates to: PPGPVHGVRLYTLGV*GYKGMNAGWSLVFT
Trigger: TGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR TCA 90 bp ACGGGGTGCGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATaGATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGC +
Preference number: 1 (lower is better)
Translates to: TGCACTHWACADTRA*MQVGRLSSHRHTWC
Trigger: GCACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCGCACCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 90 bp GGTGCGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATaGAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGCTCAC +
Preference number: 1 (lower is better)
Translates to: GAPVHTGRVRIQGHE*RLVACLHTGIRGAH
Trigger: GTGAGCACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CCA 90 bp GAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCACTAGCCTaGCATCTCAGCAGACAGCAGAGGGCAGCAGAAGCTCAGCTAGTG +
Preference number: 1 (lower is better)
Translates to: EHHTIWAHGVPSPLA*HLSRQQRAAEAQLV
Trigger: CACTAGCTGAGCTTCTGCTGCCCTCTGCTGTCTGCTGAGATGCCAGGCTAGTGGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 90 bp CAGGAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTaGCCTGACATGTTTATAGATGGACACCGGGTGCAGTCGGGGCGT +
Preference number: 1 (lower is better)
Translates to: QESLVGSAESACMHT*PDMFIDGHRVQSGR
Trigger: ACGCCCCGACTGCACCCGGTGTCCATCTATAAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CCA 90 bp ATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTaGAGCACCAACAGGAAAGACCAGAGGGGCAGAAGGAGAAGCACA +
Preference number: 1 (lower is better)
Translates to: MAVGYSGEQEQVNNA*STNRKDQRGRRRST
Trigger: TGTGCTTCTCCTTCTGCCCCTCTGGTCTTTCCTGTTGGTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR TCA 90 bp GGGCCACATCCCAAAGACAGGGTGAACCAGGGGACAGTCCAAGCCTaGGAAAGCGACAGCTACAGGAAGGAAGGCAGAAAGGCTTTCAGA +
Preference number: 1 (lower is better)
Translates to: GPHPKDRVNQGTVQA*ESDSYRKEGRKAFR
Trigger: TCTGAAAGCCTTTCTGCCTTCCTTCCTGTAGCTGTCGCTTTCTCAGGCTTGGACTGTCCCCTGGTTCACCCTGTCTTTGGGATGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 90 bp AGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATaGCTGGAGCACCAACAGGAAAGACCAGAGGGGCAGAAGGAGAAG +
Preference number: 1 (lower is better)
Translates to: RYGCGLQRGARAGKQ*LEHQQERPEGQKEK
Trigger: CTTCTCCTTCTGCCCCTCTGGTCTTTCCTGTTGGTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CCA 90 bp TACCCTGGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATaGTGTGCCCTCTCCACTAGCCTGGCATCTCAGCAGACAGCAGAG +
Preference number: 1 (lower is better)
Translates to: YPGILLQGASHHLGT*CALSTSLASQQTAE
Trigger: CTCTGCTGTCTGCTGAGATGCCAGGCTAGTGGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACCAGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR TCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTCTCCAGTGGCCACCCTaGGGAGACCAGAGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: VVIASGRGALPPGGQAGPLQWPP*GDQRPR
Trigger: CCGAGGCCTCTGGTCTCCTCAGGGTGGCCACTGGAG...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTGGCCAGTCCACGGGGTaGGCCTGTACACACTGGGCG +
Preference number: 2 (lower is better)
Translates to: VVIASGRGALPPGGQAGPGQSTG*ACTHWA
Trigger: CGCCCAGTGTGTACAGGCGCACCCCGTGGACTGGCC...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTAGCATGCAGACGGGGTaGGGCAGGGGTGAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: VVIASGRGALPPGGQAGPSMQTG*GRGEWP
Trigger: GGGCCACTCACCCCTGCCCCACCCCGTCTGCATGCT...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCTGGGGTCACGGGAACTaGGCGTTAGGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACWGHGN*ALGVPG
Trigger: CCCTGGGACACCTAACGCCCAGTTCCCGTGACCCCA...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR TCA 90 bp CGGGCTGGCGCAGTAGATGGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCACTCGCAGTCACAGTTGAGTaGGTTGCCCCGCAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: RAGAVDGCHRGVGVCQPLAVTVE*VAPQVQ
Trigger: TTGGACCTGCGGGGCAACTCACTCAACTGTGACTGC...GAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
3UTR-3UTR TCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCGGGACAGTCCAAGCCTaGGAAAGCGACAGCTACAGG +
Preference number: 2 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACGTVQA*ESDSYR
Trigger: CCTGTAGCTGTCGCTTTCTCAGGCTTGGACTGTCCC...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCTGCGCCTGTACACACTaGGCGTGTGCGGATACAAGG +
Preference number: 2 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACCACTH*ACADTR
Trigger: CCTTGTATCCGCACACGCCCAGTGTGTACAGGCGCA...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR TCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCGCGGATACAAGGGCATaGATGCAGGTTGGTCGCTTG +
Preference number: 2 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACADTRA*MQVGRL
Trigger: CAAGCGACCAACCTGCATTCATGCCCTTGTATCCGC...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR TCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCTCTTCTGTCCATGGGTaGGCTGGGATTCACGGCCAT +
Preference number: 2 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACSSVHG*AGIHGH
Trigger: ATGGCCGTGAATCCCAGCTCACCCATGGACAGAAGA...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACGGCCAGTCCACGGGGTaGGCCTGTACACACTGGGCG +
Preference number: 2 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNGQSTG*ACTHWA
Trigger: CGCCCAGTGTGTACAGGCGCACCCCGTGGACTGGCC...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAACCCCGCACCACTCGTaGATGAGACAGGGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPTPHHS*MRQGAE
Trigger: CTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGT...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTGCGCCTGTACACACTaGGCGTGTGCGGATACAAGG +
Preference number: 2 (lower is better)
Translates to: VVIASGRGALPPGGQAGPCACTH*ACADTR
Trigger: CCTTGTATCCGCACACGCCCAGTGTGTACAGGCGCA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGTGGGGTCACGGGAACTaGGCGTTAGGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQWGHGN*ALGVPG
Trigger: CCCTGGGACACCTAACGCCCAGTTCCCGTGACCCCA...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCAGCATGCAGACGGGGTaGGGCAGGGGTGAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: GILLQGASHHLGTWCALSSMQTG*GRGEWP
Trigger: GGGCCACTCACCCCTGCCCCACCCCGTCTGCATGCT...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCGAGGTCTTCTGTCCATaGGTGAGCTGGGATTCACGG +
Preference number: 2 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACEVFCP*VSWDSR
Trigger: CCGTGAATCCCAGCTCACCCATGGACAGAAGACCTC...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp CGGGCTGGCGCAGTAGATGGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCACTCGCCGGAAGATGTCTCTaGGCAGTGTCTGCAGGTTAT +
Preference number: 2 (lower is better)
Translates to: RAGAVDGCHRGVGVCQPLAGRCL*AVSAGY
Trigger: ATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC...GAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
3UTR-3UTR CCA 90 bp GCGGGCTGGCGCAGTAGATGGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCACTTCTGCAGGTTATTGTTaGCCAGCGAGAGGTGAGTCA +
Preference number: 2 (lower is better)
Translates to: AGWRSRWVPPWCWCVPATSAGYC*PARGES
Trigger: TGACTCACCTCTCGCTGGCCAACAATAACCTGCAGA...AGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
3UTR-3UTR TCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGCTCCAGTGGCCACCCTaGGGAGACCAGAGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVLQWPP*GDQRPR
Trigger: CCGAGGCCTCTGGTCTCCTCAGGGTGGCCACTGGAG...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACCACAGGCATACGTGGTaGTCACAGAGGCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNHRHTW*SQRPPP
Trigger: GGGTGGGGGCCTCTGTGAGCACCACGTATGCCTGTG...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR TCA 90 bp TTGAGTGAGTTGCCCCGCAGGTCCAAGTCATTCAGGATGTCCAGGGGCCGGAAGTTGGCCAGCGAGAGGTaGGTCAAGGACTTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: LSELPRRSKSFRMSRGRKLASER*VKDLSP
Trigger: AGGACTCAAGTCCTTGACTCACCTCTCGCTGGCCAA...CTTCCGGCCCCTGGACATCCTGAATGACTTGGACCTGCGGGGCAACTCACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518365.1
3UTR-3UTR GCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGGGTGTTCATGCTGATTaGAGTGATGATGCACGTCCT +
Preference number: 2 (lower is better)
Translates to: SQHPAPLVHETGGRAWERGVHAD*SDDARP
Trigger: AGGACGTGCATCATCACTGCAATCAGCATGAACACC...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCGGTGTTCATGCTGATTaGAGTGATGATGCACGTCCT +
Preference number: 2 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACGVHAD*SDDARP
Trigger: AGGACGTGCATCATCACTGCAATCAGCATGAACACC...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR TCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGTGGGATTCACGGCCATaGAGGAAACGCCAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQWDSRP*RKRQGE
Trigger: TTCTCCTTGGCGTTTCCTTCATGGCCGTGAATCCCA...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGGCAGCTCCCCGGGATTaGTTCTGCTGCTGTTGTTAT +
Preference number: 2 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQAAPRD*FCCCCY
Trigger: ATAACAACAGCAGCAGAAGCAATCCCGGGGAGCTGC...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp TTGAGTGAGTTGCCCCGCAGGTCCAAGTCATTCAGGATGTCCAGGGGCCGGAAGTCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LSELPRRSKSFRMSRGRKSLGSV*RLLLAS
Trigger: GCTGGCCAACAATAACCTGCAGACACTGCCCAGAGA...CTTCCGGCCCCTGGACATCCTGAATGACTTGGACCTGCGGGGCAACTCACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518365.1
3UTR-3UTR CCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACTCACACAGGCATACGTaGTGCTCACAGAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNSHRHT*CSQRPP
Trigger: TGGGGGCCTCTGTGAGCACCACGTATGCCTGTGTGA...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTCACACAGGCATACGTaGTGCTCACAGAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: ESLVGSAESACMHTCPDMSHRHT*CSQRPP
Trigger: TGGGGGCCTCTGTGAGCACCACGTATGCCTGTGTGA...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGGCATGAATGCAGGTTaGTCGCTTGTCTTCACACAG +
Preference number: 2 (lower is better)
Translates to: AKENRDRHPWQLPGIASAGMNAG*SLVFTQ
Trigger: CTGTGTGAAGACAAGCGACCAACCTGCATTCATGCC...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR TCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTATGCACACGTGCCCTaGCATGTTTATAGATGGACA +
Preference number: 2 (lower is better)
Translates to: VVIASGRGALPPGGQAGPYAHVP*HVYRWT
Trigger: TGTCCATCTATAAACATGTCAGGGCACGTGTGCATA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR TCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGAGAAAGGCTTTCAGATaGGGGGAGGTCTTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQRKAFR*GEVFCP
Trigger: TGGACAGAAGACCTCCCCTCATCTGAAAGCCTTTCT...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR TCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCATCCCAAAGACAGGGTaGACCAGGGGACAGTCCAAG +
Preference number: 2 (lower is better)
Translates to: GILLQGASHHLGTWCALSIPKTG*TRGQSK
Trigger: CTTGGACTGTCCCCTGGTTCACCCTGTCTTTGGGAT...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTATACAAGGGCATGAATaGAGGTTGGTCGCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: VVIASGRGALPPGGQAGPIQGHE*RLVACL
Trigger: AAGACAAGCGACCAACCTGCATTCATGCCCTTGTAT...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CCA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGCAGGTAAACAATGCCTaGAGCACCAACAGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLQVNNA*STNRKD
Trigger: GTCTTTCCTGTTGGTGCTCCAGGCATTGTTTACCTG...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGATACAAGGGCATGAATaGAGGTTGGTCGCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLIQGHE*RLVACL
Trigger: AAGACAAGCGACCAACCTGCATTCATGCCCTTGTAT...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACTACACACTGGGCGTGTaGGGATACAAGGGCATGAAT +
Preference number: 2 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHYTLGV*GYKGMN
Trigger: ATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTA...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGAGAGCAGGTAAACAATaGCTGGAGCACCAACAGGAA +
Preference number: 2 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQRAGKQ*LEHQQE
Trigger: TTCCTGTTGGTGCTCCAGGCATTGTTTACCTGCTCT...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTACACACTGGGCGTGTaGGGATACAAGGGCATGAAT +
Preference number: 2 (lower is better)
Translates to: ESLVGSAESACMHTCPDMYTLGV*GYKGMN
Trigger: ATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTA...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGGCTTGTATGCACACGTaGCCTGACATGTTTATAGAT +
Preference number: 2 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQACMHT*PDMFID
Trigger: ATCTATAAACATGTCAGGGCACGTGTGCATACAAGC...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR GCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCTGAATCTGCTTGTATaGACACGTGCCCTGACATGT +
Preference number: 2 (lower is better)
Translates to: GILLQGASHHLGTWCALSLNLLV*TRALTC
Trigger: ACATGTCAGGGCACGTGTGCATACAAGCAGATTCAG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 72 bp GTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTaGGCCTGTACACACTGGGCGTGTGCGGATACAAGG +
Preference number: 3 (lower is better)
Translates to: VMMHVLLGQSTG*ACTHWACADTR
Trigger: CCTTGTATCCGCACACGCCCAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CCA 72 bp CAGGGCTGCAACACGCCCTCAGGCCAAGCTCCACTCTaGGCACCCTCGCAGGTAACTCAGGTGCTTGCAGCT +
Preference number: 3 (lower is better)
Translates to: QGCNTPSGQAPL*APSQVTQVLAA
Trigger: AGCTGCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGCGTGTTGCAGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CAA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCGGCAGCTCCCCGGGATaGCTTCTGCTGCTGTTGTTA +
Preference number: 3 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACGSSPG*LLLLLL
Trigger: TAACAACAGCAGCAGAAGCAATCCCGGGGAGCTGCC...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 72 bp CAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTaGTCACAGAGGCCCCCACCCATCCTCCAGTGGCCA +
Preference number: 3 (lower is better)
Translates to: QVGRLSSHRHTW*SQRPPPILQWP
Trigger: TGGCCACTGGAGGATGGGTGGGGGCCTCTGTGAGCACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 72 bp CCAGTCCACGGGGTGCGCCTGTACACACTGGGCGTGTaGGGATACAAGGGCATGAATGCAGGTTGGTCGCTT +
Preference number: 3 (lower is better)
Translates to: PVHGVRLYTLGV*GYKGMNAGWSL
Trigger: AAGCGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCGCACCCCGTGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 72 bp TCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTaGAGCTCGGCCAGCTCTCTAATCCACCCAAGGAGC +
Preference number: 3 (lower is better)
Translates to: STLGTLAGNSGA*SSASSLIHPRS
Trigger: GCTCCTTGGGTGGATTAGAGAGCTGGCCGAGCTGCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CCA 72 bp CTTTGCCCCCAGGAGGCCAAGCAGGCCCTCAGAAGCTaGCACCACCATTCTCATCCTTATCAGTTCCGGGGG +
Preference number: 3 (lower is better)
Translates to: LCPQEAKQALRS*HHHSHPYQFRG
Trigger: CCCCCGGAACTGATAAGGATGAGAATGGTGGTGCCAGCTTCTGAGGGCCTGCTTGGCCTCCTGGGGGCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CCA 72 bp ATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTaGTGCTCACAGAGGCCCCCACCCATCCTCCAGTGG +
Preference number: 3 (lower is better)
Translates to: MQVGRLSSHRHT*CSQRPPPILQW
Trigger: CCACTGGAGGATGGGTGGGGGCCTCTGTGAGCACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CAA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGGGGCATGAATGCAGGTaGGTCGCTTGTCTTCACACA +
Preference number: 3 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLGHECR*VACLHT
Trigger: TGTGTGAAGACAAGCGACCAACCTGCATTCATGCCC...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 72 bp TTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATTaGAGTGATGATGCACGTCCTCCTGGGCCAGTCCAC +
Preference number: 3 (lower is better)
Translates to: LGVPGVPGVHAD*SDDARPPGPVH
Trigger: GTGGACTGGCCCAGGAGGACGTGCATCATCACTGCAATCAGCATGAACACCAGGCACCCCTGGGACACCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 72 bp TGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATaGCTGGAGCACCAACAGGAAAGACCAGAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: CGLQRGARAGKQ*LEHQQERPEGQ
Trigger: CTGCCCCTCTGGTCTTTCCTGTTGGTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CCA 72 bp GGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTaGAGCACCAACAGGAAAGACCAGAGGGGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: GYSGEQEQVNNA*STNRKDQRGRR
Trigger: CCTTCTGCCCCTCTGGTCTTTCCTGTTGGTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CCA 72 bp CTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTaGTCGCTTGTCTTCACACAGGCATACGTGGTGCTC +
Preference number: 3 (lower is better)
Translates to: LGVCGYKGMNAG*SLVFTQAYVVL
Trigger: GAGCACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CAA 90 bp GCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTCCTCGGAAGGTGAACTaGGATAGTGCCCAGATGTCA +
Preference number: 3 (lower is better)
Translates to: AGRCLWAVSAGYCWPARGPRKVN*DSAQMS
Trigger: TGACATCTGGGCACTATCCAAGTTCACCTTCCGAGG...ACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
3UTR TCA 72 bp CCCAAAGACAGGGTGAACCAGGGGACAGTCCAAGCCTaGGAAAGCGACAGCTACAGGAAGGAAGGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: PKDRVNQGTVQA*ESDSYRKEGRK
Trigger: CTTTCTGCCTTCCTTCCTGTAGCTGTCGCTTTCTCAGGCTTGGACTGTCCCCTGGTTCACCCTGTCTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR TCA 72 bp GCCACTCCACCAACCACTTCACCTTGCAGTCACAGTTaGGTGAGTTGCCCCGCAGGTCCAAGTCATTCAGGA +
Preference number: 3 (lower is better)
Translates to: ATPPTTSPCSHS*VSCPAGPSHSG
Trigger: TCCTGAATGACTTGGACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGTGAAGTGGTTGGTGGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
3UTR CCA 72 bp ATCCTGCTACAAGGAGCATCACACCATTTGGGCACATaGTGTGCCCTCTCCACTAGCCTGGCATCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: ILLQGASHHLGT*CALSTSLASQQ
Trigger: CTGCTGAGATGCCAGGCTAGTGGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR-3UTR CAA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACGGGCATGAATGCAGGTaGGTCGCTTGTCTTCACACA +
Preference number: 3 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNGHECR*VACLHT
Trigger: TGTGTGAAGACAAGCGACCAACCTGCATTCATGCCC...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR TCA 72 bp CTCCACCAACCACTTCACCTTGCAGTCACAGTTGAGTaGGTTGCCCCGCAGGTCCAAGTCATTCAGGATGTC +
Preference number: 3 (lower is better)
Translates to: LHQPLHLAVTVE*VAPQVQVIQDV
Trigger: GACATCCTGAATGACTTGGACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGTGAAGTGGTTGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
3UTR GCA 72 bp GTACACACTGGGCGTGTGCGGATACAAGGGCATGAATaGAGGTTGGTCGCTTGTCTTCACACAGGCATACGT +
Preference number: 3 (lower is better)
Translates to: VHTGRVRIQGHE*RLVACLHTGIR
Trigger: ACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR GCA 72 bp CTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTaGCCTGACATGTTTATAGATGGACACCGGGTGCAG +
Preference number: 3 (lower is better)
Translates to: LVGSAESACMHT*PDMFIDGHRVQ
Trigger: CTGCACCCGGTGTCCATCTATAAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTGCGGTCCCCTCCCCTaGTCGCTCCCGCGATCCGGC +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPCGPLP*SLPRSG
Trigger: GCCGGATCGCGGGAGCGAGCAGGGGAGGGGACCGCA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGTGCGGTCCCCTCCCCTaGTCGCTCCCGCGATCCGGC +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLCGPLP*SLPRSG
Trigger: GCCGGATCGCGGGAGCGAGCAGGGGAGGGGACCGCA...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTAGCCAGGGGCCCGCCTaGGGACTCCTCCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPSQGPA*GLLLPS
Trigger: CGAGGGCAGGAGGAGTCCGCAGGCGGGCCCCTGGCT...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGGGGCTGGCACCTCCCTaGCACCGGCAGCTGCTACCG +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLGLAPP*HRQLLP
Trigger: CGGTAGCAGCTGCCGGTGGCAGGGAGGTGCCAGCCC...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGGGGGCCAGGAGTAGCTaGGCGTCCCCAGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERGARSS*ASPAGM
Trigger: CATGCCTGCTGGGGACGCCCAGCTACTCCTGGCCCC...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTAGGCGGTGTCCCTGGTaGAAGAGCAGCTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPRRCPW*KSSWAG
Trigger: GCCCGCCCAGCTGCTCTTGCACCAGGGACACCGCCT...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCGAGGCTGGTGGCGCCTaGCTTGGAGCTGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACEAGGA*LGAVSH
Trigger: GTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTC...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTCCCACAAGGAAGGGCTaGAGGGCCAGCGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASAPTRKG*RASEPR
Trigger: CCGGGGCTCGCTGGCCCTGCAGCCCTTCCTTGTGGG...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp CGGGCTGGCGCAGTAGATGGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCACTCGGCTGGCGCAGTAGATaGGTGCCACCGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RAGAVDGCHRGVGVCQPLGWRSR*VPPWCW
Trigger: CCAACACCACGGTGGCACCCATCTACTGCGCCAGCC...GAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTGCACCTTGTGCTCCTaGAAGCGGGGCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPCTLCS*KRGGLA
Trigger: CGCCAGCCCGCCCCGCTTCCAGGAGCACAAGGTGCA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp CGGGCTGGCGCAGTAGATGGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCACTCGGCGCAGTAGATGGGTaGCACCGTGGTGTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RAGAVDGCHRGVGVCQPLGAVDG*HRGVGV
Trigger: CACACCAACACCACGGTGGCACCCATCTACTGCGCC...GAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR GCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGGTGCCAGGGGTGCAGTaGCTGGTGGGAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERVPGVQ*LVGVEA
Trigger: GGCTTCTACTCCCACCAGGCACTGCACCCCTGGCAC...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGCGGGTGCCTGGGAGCTaGTGGACACAATCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERRVPGS*WTQSAV
Trigger: CACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCG...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCCACAGGCATACGTGGTaGTCACAGAGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACHRHTW*SQRPPP
Trigger: GGGTGGGGGCCTCTGTGAGCACCACGTATGCCTGTG...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATGGCCAGTCCACGGGGTaGGCCTGTACACACTGGGCG +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADGQSTG*ACTHWA
Trigger: CGCCCAGTGTGTACAGGCGCACCCCGTGGACTGGCC...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTGGTGGGGCCAGGGCTaGAACACGCCCTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPWWGQG*NTPSGQ
Trigger: TTGGCCTGAGGGCGTGTTGCAGCCCTGGCCCCACCA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCCCGAGGGCAGGTTCCTaGGCACCGCCTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACPRAGS*APPLSP
Trigger: TGGACTCAAAGGCGGTGCCCAGGAACCTGCCCTCGG...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGTGGTGGCGCCTGCCTTaGAGCTGTCAGCCACGGCAA +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERWWRLP*SCQPRQ
Trigger: TTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCA...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGCCAGCGGTAGAGGCTaGTGGCGCCTGCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASAASGRG*WRLPWS
Trigger: GCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGC...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATGGGGCCAGGAGTAGCTaGGCGTCCCCAGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADGARSS*ASPAGM
Trigger: CATGCCTGCTGGGGACGCCCAGCTACTCCTGGCCCC...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGAGCATGCAGACGGGGTaGGGCAGGGGTGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLSMQTG*GRGEWP
Trigger: GGGCCACTCACCCCTGCCCCACCCCGTCTGCATGCT...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATCCTGGGCACCGCCTTTaGGTCCACGCAGAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADPGHRL*VHAEGG
Trigger: ACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGG...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATGGATGGTGCAGGCACTaGCTCCTGGCTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADGWCRH*LLAGPE
Trigger: CTCTGGCCCAGCCAGGAGTCAGTGCCTGCACCATCC...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGGGATGGTGCAGGCACTaGCTCCTGGCTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLGWCRH*LLAGPE
Trigger: CTCTGGCCCAGCCAGGAGTCAGTGCCTGCACCATCC...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCGACTCCACTGATAGATaGCGGGTGCCTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACDSTDR*RVPGSC
Trigger: GCAGCTCCCAGGCACCCGTCATCTATCAGTGGAGTC...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTCCAGCGTCTGTCCCTTaGAGCTGGGGGCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPPASVP*SWGPGV
Trigger: TACTCCTGGCCCCCAGCTTCAAGGGACAGACGCTGG...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGCCAGCGTCTGTCCCTTaGAGCTGGGGGCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLPASVP*SWGPGV
Trigger: TACTCCTGGCCCCCAGCTTCAAGGGACAGACGCTGG...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTGGCCCCGGGGAAGCATaGCAGATATGGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPGPGEA*QIWLWA
Trigger: AGCCCACAGCCATATCTGTCATGCTTCCCCGGGGCC...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCACCGTCCGCGTCCATGTaGGCATGCAGACGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPPSASM*ACRRGG
Trigger: CCCACCCCGTCTGCATGCTCACATGGACGCGGACGG...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGAGGCGGTGTCCCTGGTaGAAGAGCAGCTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQRRCPW*KSSWAG
Trigger: GCCCGCCCAGCTGCTCTTGCACCAGGGACACCGCCT...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCGGCGCAGTAGATGGGTaGCACCGTGGTGTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACGAVDG*HRGVGV
Trigger: CACACCAACACCACGGTGGCACCCATCTACTGCGCC...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTAGGTCCTGCACCTTGTaGTCCTGGAAGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASARSCTL*SWKRGG
Trigger: CCCGCCCCGCTTCCAGGAGCACAAGGTGCAGGACCT...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTCCACCACCATCGGCTTaGAGTGCACTGCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPPPPSA*SALQRG
Trigger: CCCCCTCTGCAGTGCACTGCAAGCCGATGGTGGTGG...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTCGGGTGCCTGGGAGCTaGTGGACACAATCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPRVPGS*WTQSAV
Trigger: CACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCG...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGACCCCGCACCACTCGTaGATGAGACAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLTPHHS*MRQGAE
Trigger: CTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGT...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGCCGAGGGCAGGTTCCTaGGCACCGCCTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLPRAGS*APPLSP
Trigger: TGGACTCAAAGGCGGTGCCCAGGAACCTGCCCTCGG...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCCTCAGCCGACACTGCTaGGAAGGCCAGGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACLSRHC*EGQGLV
Trigger: TACCAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAG...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTGGACACAATCAGCCGTaGCTTGCCCTCGCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPGHNQP*LALAVH
Trigger: GTGGACGGCGAGGGCAAGCCACGGCTGATTGTGTCC...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGCCAGGGTCAGGGAGATaGCCTCCGAGGGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSPGSGR*PPRAGS
Trigger: GGAACCTGCCCTCGGAGGTCATCTCCCTGACCCTGG...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCCCTTGCAGTCACAGTTaGGTGAGTTGCCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACPCSHS*VSCPAG
Trigger: ACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGG...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCCGTGGTGTTGGTGTGTaGCAGCCACTCCACCAACCA +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACRGVGV*QPLHQP
Trigger: TGGTTGGTGGAGTGGCTGGCACACACCAACACCACG...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGCGCAGCGGCAGGTCCTaGACCTTGTGCTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGRSGRS*TLCSWK
Trigger: CTTCCAGGAGCACAAGGTGCAGGACCTGCCGCTGCG...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCTGCGGGTCAATGTCTTaGAGCCTGGTGAAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACCGSMS*SLVKRV
Trigger: CACGCGCTTCACCAGGCTGCAAGACATTGACCCGCA...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTACCCCGCACCACTCGTaGATGAGACAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASATPHHS*MRQGAE
Trigger: CTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGT...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTCCACTGAAAGGCAGTaGTCCTGGGGGCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPSTERQ*SWGPLW
Trigger: CCACAGAGGCCCCCAGGAGCACTGCCTTTCAGTGGA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGTCCACTGAAAGGCAGTaGTCCTGGGGGCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLSTERQ*SWGPLW
Trigger: CCACAGAGGCCCCCAGGAGCACTGCCTTTCAGTGGA...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGGCAGGCACTGACTCCTaGCTGGGCCAGAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERAGTDS*LGQSQI
Trigger: TATTTGGCTCTGGCCCAGCCAGGAGTCAGTGCCTGC...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTACGACCACGTACAGCTaGCTGTCCACCACCATCGGC +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPTTTYS*LSTTIG
Trigger: GCCGATGGTGGTGGACAGCCAGCTGTACGTGGTCGT...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATTGGTGGCGCCTGCCTTaGAGCTGTCAGCCACGGCAA +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADWWRLP*SCQPRQ
Trigger: TTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCA...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGGGACACAATCAGCCGTaGCTTGCCCTCGCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGGHNQP*LALAVH
Trigger: GTGGACGGCGAGGGCAAGCCACGGCTGATTGTGTCC...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGTGGGCATCAGGCACCTaGGTCACCTCACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQWASGT*VTSPWA
Trigger: GGCCCAGGGTGAGGTGACCCAGGTGCCTGATGCCCA...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGTGGGCATCAGGCACCTaGGTCACCTCACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSWASGT*VTSPWA
Trigger: GGCCCAGGGTGAGGTGACCCAGGTGCCTGATGCCCA...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCTCACACAGGCATACGTaGTGCTCACAGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACSHRHT*CSQRPP
Trigger: TGGGGGCCTCTGTGAGCACCACGTATGCCTGTGTGA...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGTGCGCCTGTACACACTaGGCGTGTGCGGATACAAGG +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERCACTH*ACADTR
Trigger: CCTTGTATCCGCACACGCCCAGTGTGTACAGGCGCA...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACCCAGGGTCAGGGAGATaGCCTCCGAGGGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHPGSGR*PPRAGS
Trigger: GGAACCTGCCCTCGGAGGTCATCTCCCTGACCCTGG...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCTCCAGTGGCCACCCTaGGGAGACCAGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSLQWPP*GDQRPR
Trigger: CCGAGGCCTCTGGTCTCCTCAGGGTGGCCACTGGAG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGGCGGATACAAGGGCATaGATGCAGGTTGGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERADTRA*MQVGRL
Trigger: CAAGCGACCAACCTGCATTCATGCCCTTGTATCCGC...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGAGCCAGGGGCCCGCCTaGGGACTCCTCCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVSQGPA*GLLLPS
Trigger: CGAGGGCAGGAGGAGTCCGCAGGCGGGCCCCTGGCT...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCAAGGAGGCGGTGTCCCTGGTaGAAGAGCAGCTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: CLWAVSAGYCWPARGESRRRCPW*KSSWAG
Trigger: GCCCGCCCAGCTGCTCTTGCACCAGGGACACCGCCT...CCTTGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR GCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGGGCGCAGTAGATGGGTaGCACCGTGGTGTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGGAVDG*HRGVGV
Trigger: CACACCAACACCACGGTGGCACCCATCTACTGCGCC...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACGGGCTCAGCCGACACTaGTGGGAAGGCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHGLSRH*WEGQGL
Trigger: CAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAGCCC...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGACCATCGGCTTGCAGTaGACTGCAGAGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSTIGLQ*TAEGAG
Trigger: CCCAGCCCCCTCTGCAGTGCACTGCAAGCCGATGGT...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGCCACCACCATCGGCTTaGAGTGCACTGCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQPPPSA*SALQRG
Trigger: CCCCCTCTGCAGTGCACTGCAAGCCGATGGTGGTGG...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGCTGATAGATGACGGGTaGCTGGGAGCTGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLLIDDG*LGAAGH
Trigger: GTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAG...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGCCCTGGGCCACAAACTaGTTCTGGGTGCGACTCCAC +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGPWATN*FWVRLH
Trigger: GTGGAGTCGCACCCAGAAGCAGTTTGTGGCCCAGGG...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGCCCTGGGCCACAAACTaGTTCTGGGTGCGACTCCAC +
Preference number: 4 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLPWATN*FWVRLH
Trigger: GTGGAGTCGCACCCAGAAGCAGTTTGTGGCCCAGGG...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCGGGAGGGCAGGGCCTaGACCTCCGAGAAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSREGRA*TSEKRV
Trigger: TACCCGCTTCTCGGAGGTGCAGGCCCTGCCCTCCCG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAGAAATCACTGCCCAGTaGCAGGTAGCGGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPEITAQ*QVAAAT
Trigger: GGTGGCCGCCGCTACCTGGCACTGGGCAGTGATTTC...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp AGGGGCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGCCGAGGGCAGGTTCCTaGGCACCGCCTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RGRKMSLGSVCRLLLASEPRAGS*APPLSP
Trigger: TGGACTCAAAGGCGGTGCCCAGGAACCTGCCCTCGG...CTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGTGCAGCAGCGGGAGGTaGGAGAACGCTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQCSSGR*ENAPSW
Trigger: CCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCA...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAGGCTGGCGCAGTAGATaGGTGCCACCGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPGWRSR*VPPWCW
Trigger: CCAACACCACGGTGGCACCCATCTACTGCGCCAGCC...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCGGAAGCGGGGCGGGCTaGCGCAGTAGATGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSGSGAG*RSRWVP
Trigger: TGGCACCCATCTACTGCGCCAGCCCGCCCCGCTTCC...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACTGCACCTTGTGCTCCTaGAAGCGGGGCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNCTLCS*KRGGLA
Trigger: CGCCAGCCCGCCCCGCTTCCAGGAGCACAAGGTGCA...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGCTCAGCCGACACTGCTaGGAAGGCCAGGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLLSRHC*EGQGLV
Trigger: TACCAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAG...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTACGACCACGTACAGCTaGCTGTCCACCACCATCGGC +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASATTTYS*LSTTIG
Trigger: GCCGATGGTGGTGGACAGCCAGCTGTACGTGGTCGT...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGGAGCCGCCAAACAGCTaGGCCACGACCACGTACAGC +
Preference number: 4 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSEPPNS*ATTTYS
Trigger: GCTGTACGTGGTCGTGGCCCAGCTGTTTGGCGGCTC...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACGCCAGCGGTAGAGGCTaGTGGCGCCTGCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNASGRG*WRLPWS
Trigger: GCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGC...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTGGGTCACCTCACCCTaGGCCACAAACTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPWVTSP*ATNCFW
Trigger: CCAGAAGCAGTTTGTGGCCCAGGGTGAGGTGACCCA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCATGGGGTCACGGGAACTaGGCGTTAGGTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPWGHGN*ALGVPG
Trigger: CCCTGGGACACCTAACGCCCAGTTCCCGTGACCCCA...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAGCATGCAGACGGGGTaGGGCAGGGGTGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNSMQTG*GRGEWP
Trigger: GGGCCACTCACCCCTGCCCCACCCCGTCTGCATGCT...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CAA 72 bp TCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTaGCCCCCAGGAGGCCAAGCAGGCCCTCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SAAVVIASGRGA*PPGGQAGPQKL
Trigger: CAGCTTCTGAGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGCCTGGGCACCGCCTTTaGGTCCACGCAGAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMPGHRL*VHAEGG
Trigger: ACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGG...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCAAGGACTTGAGCCTGGGCACCGCCTTTaGGTCCACGCAGAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GQCLQVIVGQREVSQGLEPGHRL*VHAEGG
Trigger: ACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGG...CTCAAGTCCTTGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR TCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTGGTGCGACAGTCCTGTaGAGGCGTTGTCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPGATVL*RRCLQS
Trigger: TGATTGGAGACAACGCCTTCACAGGACTGTCGCACC...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGGCAGTCACAGTTGAGTaGGTTGCCCCGCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGAVTVE*VAPQVQ
Trigger: TTGGACCTGCGGGGCAACTCACTCAACTGTGACTGC...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAGACTCCACTGATAGATaGCGGGTGCCTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPDSTDR*RVPGSC
Trigger: GCAGCTCCCAGGCACCCGTCATCTATCAGTGGAGTC...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACCGCCAATGTAGCGGCTaGGGCACAGGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHRQCSG*GTGSCR
Trigger: GCGACAGCTACCTGTGCCTCAGCCGCTACATTGGCG...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGGCACCCCCTAGGCACTaGGATCCACCACAATGTGTC +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGAPPRH*DPPQCV
Trigger: GACACATTGTGGTGGATCTCAGTGCCTAGGGGGTGC...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGGGGACAGTCCAAGCCTaGGAAAGCGACAGCTACAGG +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGGTVQA*ESDSYR
Trigger: CCTGTAGCTGTCGCTTTCTCAGGCTTGGACTGTCCC...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGTCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERSLGSV*RLLLAS
Trigger: GCTGGCCAACAATAACCTGCAGACACTGCCCAGAGA...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGGGGCTCAGCCGACACTaGTGGGAAGGCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMGLSRH*WEGQGL
Trigger: CAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAGCCC...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGTGCGGGTCAATGTCTTaGAGCCTGGTGAAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGCGSMS*SLVKRV
Trigger: CACGCGCTTCACCAGGCTGCAAGACATTGACCCGCA...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGCAATCAGCCGTGGCTTaGCCTCGCCGTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGQSAVA*PRRPQT
Trigger: AGTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTG...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGCCCACAAGGAAGGGCTaGAGGGCCAGCGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVPTRKG*RASEPR
Trigger: CCGGGGCTCGCTGGCCCTGCAGCCCTTCCTTGTGGG...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACGAAATCACTGCCCAGTaGCAGGTAGCGGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHEITAQ*QVAAAT
Trigger: GGTGGCCGCCGCTACCTGGCACTGGGCAGTGATTTC...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATGCCAGCGAGAGATACTaGAGGTGCGACAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADASERY*RCDSPV
Trigger: CACAGGACTGTCGCACCTGCAGTATCTCTCGCTGGC...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS-3UTR CCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGGTGCCACCGTGGTGTTaGTGTGTGCCAGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQVPPWC*CVPATP
Trigger: TGGAGTGGCTGGCACACACCAACACCACGGTGGCAC...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGGCAGGCACTGACTCCTaGCTGGGCCAGAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGAGTDS*LGQSQI
Trigger: TATTTGGCTCTGGCCCAGCCAGGAGTCAGTGCCTGC...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGCACTGCAGAGGGGGCTaGGATTCTATCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERHCRGG*DSIIVS
Trigger: CGAGACTATGATAGAATCCCAGCCCCCTCTGCAGTG...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCACCCAGCGCAGGATCTTaGAGTCGCCAATGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPPSAGS*SRQCSG
Trigger: GCCGCTACATTGGCGACTCCAAGATCCTGCGCTGGG...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTTCACACAGGCATACGTaGTGCTCACAGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASASHRHT*CSQRPP
Trigger: TGGGGGCCTCTGTGAGCACCACGTATGCCTGTGTGA...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACTGGGGTCACGGGAACTaGGCGTTAGGTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHWGHGN*ALGVPG
Trigger: CCCTGGGACACCTAACGCCCAGTTCCCGTGACCCCA...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTCAGGCCCTCAGAAGCTaGCACCACCATTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPQALRS*HHHSHP
Trigger: AGGATGAGAATGGTGGTGCCAGCTTCTGAGGGCCTG...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATTCCATCCTGGATCTCTaGGAAGGCGGCATTCACCAG +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADSILDL*EGGIHQ
Trigger: CTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGA...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp AGGGGCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGCCTTGCAGTCACAGTTaGGTGAGTTGCCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: RGRKMSLGSVCRLLLASEPCSHS*VSCPAG
Trigger: ACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGG...CTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR TCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCGGCCCCGGGGAAGCATaGCAGATATGGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSGPGEA*QIWLWA
Trigger: AGCCCACAGCCATATCTGTCATGCTTCCCCGGGGCC...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTCCGTCCGCGTCCATGTaGGCATGCAGACGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFPSASM*ACRRGG
Trigger: CCCACCCCGTCTGCATGCTCACATGGACGCGGACGG...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGTGGGATTCACGGCCATaGAGGAAACGCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLWDSRP*RKRQGE
Trigger: TTCTCCTTGGCGTTTCCTTCATGGCCGTGAATCCCA...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCAGAAAGGCTTTCAGATaGGGGGAGGTCTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACRKAFR*GEVFCP
Trigger: TGGACAGAAGACCTCCCCTCATCTGAAAGCCTTTCT...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPSLGSV*RLLLAS
Trigger: GCTGGCCAACAATAACCTGCAGACACTGCCCAGAGA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACCGCAGCGGCAGGTCCTaGACCTTGTGCTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNRSGRS*TLCSWK
Trigger: CTTCCAGGAGCACAAGGTGCAGGACCTGCCGCTGCG...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACACCATCGGCTTGCAGTaGACTGCAGAGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNTIGLQ*TAEGAG
Trigger: CCCAGCCCCCTCTGCAGTGCACTGCAAGCCGATGGT...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGGGCTTGCGCACGCGCTaGGGGTCAATGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMGLRTR*GSMSCS
Trigger: GCTGCAAGACATTGACCCGCAGCGCGTGCGCAAGCC...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGACCAGTCACCGTCGATaGGGAAGGCTTCTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLTSHRR*GRLLGR
Trigger: ACGACCTAGAAGCCTTCCGCATCGACGGTGACTGGT...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCACAGGCATACGTGGTaGTCACAGAGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSHRHTW*SQRPPP
Trigger: GGGTGGGGGCCTCTGTGAGCACCACGTATGCCTGTG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCTACACACTGGGCGTGTaGGGATACAAGGGCATGAAT +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACYTLGV*GYKGMN
Trigger: ATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTA...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCCCCCGGGATTGCTTCTaGTGCTGTTGTTATTGCTTC +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACPRDCF*CCCYCF
Trigger: GAAGCAATAACAACAGCAGCAGAAGCAATCCCGGGG...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATGGTAACTCAGGTGCTTaGAGCTCGGCCAGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADGNSGA*SSASSL
Trigger: TAGAGAGCTGGCCGAGCTGCAAGCACCTGAGTTACC...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTGGAAGCGGGGCGGGCTaGCGCAGTAGATGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFGSGAG*RSRWVP
Trigger: TGGCACCCATCTACTGCGCCAGCCCGCCCCGCTTCC...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTCAGGCCCTCAGAAGCTaGCACCACCATTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASAQALRS*HHHSHP
Trigger: AGGATGAGAATGGTGGTGCCAGCTTCTGAGGGCCTG...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATCACCATTTGGGCACATaGTGTGCCCTCTCCACTAGC +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADHHLGT*CALSTS
Trigger: GCTAGTGGAGAGGGCACACCATGTGCCCAAATGGTG...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGGAGCATCACACCATTTaGGCACATGGTGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLEHHTI*AHGVPS
Trigger: AGAGGGCACACCATGTGCCCAAATGGTGTGATGCTC...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAGGTGCGACAGTCCTGTaGAGGCGTTGTCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPGATVL*RRCLQS
Trigger: TGATTGGAGACAACGCCTTCACAGGACTGTCGCACC...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGCAGTCACAGTTGAGTaGGTTGCCCCGCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: AGRCLWAVSAGYCWPARGAVTVE*VAPQVQ
Trigger: TTGGACCTGCGGGGCAACTCACTCAACTGTGACTGC...ACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR TCA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCACACAAAATCTGTGGTaGTGCAATCGAACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACTQNLW*CNRTPA
Trigger: TGCGGGAGTTCGATTGCATCACCACAGATTTTGTGT...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAGCGGATACAAGGGCATaGATGCAGGTTGGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPADTRA*MQVGRL
Trigger: CAAGCGACCAACCTGCATTCATGCCCTTGTATCCGC...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGGGGCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGCTCTTAGCGCTGACTTaGAGCATGAGGCAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RGRKMSLGSVCRLLLASELLALT*SMRQKP
Trigger: CGGCTTCTGCCTCATGCTGCAAGTCAGCGCTAAGAG...CTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR GCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACCGTGGTGTTGGTGTGTaGCAGCCACTCCACCAACCA +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHRGVGV*QPLHQP
Trigger: TGGTTGGTGGAGTGGCTGGCACACACCAACACCACG...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGAGGTCCTGCACCTTGTaGTCCTGGAAGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVRSCTL*SWKRGG
Trigger: CCCGCCCCGCTTCCAGGAGCACAAGGTGCAGGACCT...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTGAGGCTGGTGGCGCCTaGCTTGGAGCTGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFEAGGA*LGAVSH
Trigger: GTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTC...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGTACACACTGGGCGTGTaGGGATACAAGGGCATGAAT +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLYTLGV*GYKGMN
Trigger: ATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTA...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTGCTGCTGTTGTTATTaGTTCGGGCAGAGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPCCCCY*FGQRGF
Trigger: AAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGGGTAACTCAGGTGCTTaGAGCTCGGCCAGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQGNSGA*SSASSL
Trigger: TAGAGAGCTGGCCGAGCTGCAAGCACCTGAGTTACC...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTTGGTGGGGCCAGGGCTaGAACACGCCCTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFWWGQG*NTPSGQ
Trigger: TTGGCCTGAGGGCGTGTTGCAGCCCTGGCCCCACCA...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCAAGGCATTCACCAGGGTCCTaGGGGGACACCCGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: CLWAVSAGYCWPARGESRHSPGS*GDTRVS
Trigger: ACTGACTCGGGTGTCCCCGCAGGACCCTGGTGAATG...CCTTGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CCA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGGCCGGAAGATGTCTCTaGGCAGTGTCTGCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLAGRCL*AVSAGY
Trigger: ATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGCCGGAAGATGTCTCTaGGCAGTGTCTGCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASAAGRCL*AVSAGY
Trigger: ATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCAGATGGGTGCCACCGTaGTGTTGGTGTGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSRWVPP*CWCVPA
Trigger: GGCTGGCACACACCAACACCACGGTGGCACCCATCT...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGAGATGGGTGCCACCGTaGTGTTGGTGTGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMRWVPP*CWCVPA
Trigger: GGCTGGCACACACCAACACCACGGTGGCACCCATCT...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCAAGGAGATGGGTGCCACCGTaGTGTTGGTGTGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CLWAVSAGYCWPARGESRRWVPP*CWCVPA
Trigger: GGCTGGCACACACCAACACCACGGTGGCACCCATCT...CCTTGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCCCAGCGCAGGATCTTaGAGTCGCCAATGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSPSAGS*SRQCSG
Trigger: GCCGCTACATTGGCGACTCCAAGATCCTGCGCTGGG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTGCACAGCCAGCTCCTaGAACCGTACAAACTTCTGT +
Preference number: 4 (lower is better)
Translates to: VVIASGRGALPPGGQAGPCTASS*NRTNFC
Trigger: ACAGAAGTTTGTACGGTTCCAGGAGCTGGCTGTGCA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGGGCATGAATGCAGGTTaGTCGCTTGTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLGMNAG*SLVFTQ
Trigger: CTGTGTGAAGACAAGCGACCAACCTGCATTCATGCC...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGCAGGTAAACAATGCCTaGAGCACCAACAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SQHPAPLVHETGGRAWERQVNNA*STNRKD
Trigger: GTCTTTCCTGTTGGTGCTCCAGGCATTGTTTACCTG...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGGAGGTCTTCTGTCCATaGGTGAGCTGGGATTCACGG +
Preference number: 4 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSEVFCP*VSWDSR
Trigger: CCGTGAATCCCAGCTCACCCATGGACAGAAGACCTC...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACGGCCAAGCTCCACTCTaGGCACCCTCGCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNGQAPL*APSQVT
Trigger: AGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCC...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGGGCCAAGCTCCACTCTaGGCACCCTCGCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMGQAPL*APSQVT
Trigger: AGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCC...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTTCCATCCTGGATCTCTaGGAAGGCGGCATTCACCAG +
Preference number: 4 (lower is better)
Translates to: AGRCLWAVSAGYCWPARGSILDL*EGGIHQ
Trigger: CTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGA...ACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR TCA 90 bp CCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGTTGGCCAGCGAGAGGTaGGTCAAGGACTTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PEDVSGQCLQVIVGQREVLASER*VKDLSP
Trigger: AGGACTCAAGTCCTTGACTCACCTCTCGCTGGCCAA...CACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR TCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGGCAGTCACAGTTGAGTaGGTTGCCCCGCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMAVTVE*VAPQVQ
Trigger: TTGGACCTGCGGGGCAACTCACTCAACTGTGACTGC...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCTGTCTTGCAGCCTGGTaGAGCGCGTGGTGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSCLAAW*SAWCWD
Trigger: ATCCCAACACCACGCGCTTCACCAGGCTGCAAGACA...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGCGCCAATGTAGCGGCTaGGGCACAGGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVRQCSG*GTGSCR
Trigger: GCGACAGCTACCTGTGCCTCAGCCGCTACATTGGCG...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGAGAAAGGCTTTCAGATaGGGGGAGGTCTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGRKAFR*GEVFCP
Trigger: TGGACAGAAGACCTCCCCTCATCTGAAAGCCTTTCT...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGTTGAGTAACAAGAACTaGAGCAGCGGGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQLSNKN*SSGRWE
Trigger: CTCCCACCTCCCGCTGCTGCAGTTCTTGTTACTCAA...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGTCAATGAAGAGATACTaGAGGTGCGACAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLSMKRY*RCDSPV
Trigger: CACAGGACTGTCGCACCTGCAGTATCTCTTCATTGA...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306317.7
CDS-3UTR GCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGGTGCCAGGGGTGCAGTaGCTGGTGGGAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVVPGVQ*LVGVEA
Trigger: GGCTTCTACTCCCACCAGGCACTGCACCCCTGGCAC...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACCAATCAGCCGTGGCTTaGCCTCGCCGTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNQSAVA*PRRPQT
Trigger: AGTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTG...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACCTGATAGATGACGGGTaGCTGGGAGCTGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNLIDDG*LGAAGH
Trigger: GTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAG...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATCCCCGGGATTGCTTCTaGTGCTGTTGTTATTGCTTC +
Preference number: 4 (lower is better)
Translates to: GHGNWALGVPGVPGVHADPRDCF*CCCYCF
Trigger: GAAGCAATAACAACAGCAGCAGAAGCAATCCCGGGG...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTCAGTACTGTGGGGTCTaGAAGGGCTGTGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: AGRCLWAVSAGYCWPARGQYCGV*KGCEGD
Trigger: ATCTCCCTCACAGCCCTTGCAGACCCCACAGTACTG...ACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTTGCAGCAGCGGGAGGTaGGAGAACGCTCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFCSSGR*ENAPSW
Trigger: CCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCA...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGGGCTGGCGCAGTAGATaGGTGCCACCGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVGWRSR*VPPWCW
Trigger: CCAACACCACGGTGGCACCCATCTACTGCGCCAGCC...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGGGAAGGCCAGGGTCTaGTACAACACAAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASAGKARV*YNTKSV
Trigger: CACAGATTTTGTGTTGTACCAGACCCTGGCCTTCCC...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCACACTGCAGAGGGGGCTaGGATTCTATCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPHCRGG*DSIIVS
Trigger: CGAGACTATGATAGAATCCCAGCCCCCTCTGCAGTG...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTGAGCCGCCAAACAGCTaGGCCACGACCACGTACAGC +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFEPPNS*ATTTYS
Trigger: GCTGTACGTGGTCGTGGCCCAGCTGTTTGGCGGCTC...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCTGGGTCACCTCACCCTaGGCCACAAACTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSWVTSP*ATNCFW
Trigger: CCAGAAGCAGTTTGTGGCCCAGGGTGAGGTGACCCA...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTGCGCCTGTACACACTaGGCGTGTGCGGATACAAGG +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMCACTH*ACADTR
Trigger: CCTTGTATCCGCACACGCCCAGTGTGTACAGGCGCA...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp CGCAGTAGATGGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCACTCCACCAACCTGTCATTGTTCTCAATaGAGAGATACTGCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: RSRWVPPWCWCVPATPPTCHCSQ*RDTAGA
Trigger: CGCACCTGCAGTATCTCTTCATTGAGAACAATGACA...GGTTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR TCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACTTGGCCAGCGAGAGGTaGGTCAAGGACTTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNLASER*VKDLSP
Trigger: AGGACTCAAGTCCTTGACTCACCTCTCGCTGGCCAA...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306317.7
CDS-3UTR TCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTCTTCTGTCCATGGGTaGGCTGGGATTCACGGCCAT +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMSSVHG*AGIHGH
Trigger: ATGGCCGTGAATCCCAGCTCACCCATGGACAGAAGA...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACATCCCAAAGACAGGGTaGACCAGGGGACAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNIPKTG*TRGQSK
Trigger: CTTGGACTGTCCCCTGGTTCACCCTGTCTTTGGGAT...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCTCTTAGCGCTGACTTaGAGCATGAGGCAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSLLALT*SMRQKP
Trigger: CGGCTTCTGCCTCATGCTGCAAGTCAGCGCTAAGAG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp CCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGTTGAGTAACAAGAACTaGAGCAGCGGGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PEDVSGQCLQVIVGQREVLSNKN*SSGRWE
Trigger: CTCCCACCTCCCGCTGCTGCAGTTCTTGTTACTCAA...CACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR GCA 90 bp GCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTAAGAGATACTGCAGGTaGGACAGTCCTGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AGRCLWAVSAGYCWPARGKRYCR*DSPVKA
Trigger: CGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTT...ACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR GCA 90 bp AGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCACGTGGTGTTGGTGTGTaGCAGCCACTCCACCAACCA +
Preference number: 4 (lower is better)
Translates to: RCLWAVSAGYCWPARGESRGVGV*QPLHQP
Trigger: TGGTTGGTGGAGTGGCTGGCACACACCAACACCACG...TGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CCA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGGGCATGAATGCAGGTTaGTCGCTTGTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSGMNAG*SLVFTQ
Trigger: CTGTGTGAAGACAAGCGACCAACCTGCATTCATGCC...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCACCATTTGGGCACATaGTGTGCCCTCTCCACTAGC +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSHHLGT*CALSTS
Trigger: GCTAGTGGAGAGGGCACACCATGTGCCCAAATGGTG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CAA 72 bp ACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTaGGTCGCTTGTCTTCACACAGGCATACGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TGRVRIQGHECR*VACLHTGIRGA
Trigger: AGCACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCAAGGTGCGACAGTCCTGTaGAGGCGTTGTCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: DVSGQCLQVIVGQREVSQGATVL*RRCLQS
Trigger: TGATTGGAGACAACGCCTTCACAGGACTGTCGCACC...TTGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR TCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTCCTTGCAGTCACAGTTaGGTGAGTTGCCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFPCSHS*VSCPAG
Trigger: ACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGG...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAACACAAAATCTGTGGTaGTGCAATCGAACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPTQNLW*CNRTPA
Trigger: TGCGGGAGTTCGATTGCATCACCACAGATTTTGTGT...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGTGTCTTGCAGCCTGGTaGAGCGCGTGGTGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVCLAAW*SAWCWD
Trigger: ATCCCAACACCACGCGCTTCACCAGGCTGCAAGACA...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGGCACCCCCTAGGCACTaGGATCCACCACAATGTGTC +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVAPPRH*DPPQCV
Trigger: GACACATTGTGGTGGATCTCAGTGCCTAGGGGGTGC...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGTATGCACACGTGCCCTaGCATGTTTATAGATGGACA +
Preference number: 4 (lower is better)
Translates to: VCNECVRPRPCEHADGVGYAHVP*HVYRWT
Trigger: TGTCCATCTATAAACATGTCAGGGCACGTGTGCATA...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACTGGGATTCACGGCCATaGAGGAAACGCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNWDSRP*RKRQGE
Trigger: TTCTCCTTGGCGTTTCCTTCATGGCCGTGAATCCCA...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGGGGACAGTCCAAGCCTaGGAAAGCGACAGCTACAGG +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVGTVQA*ESDSYR
Trigger: CCTGTAGCTGTCGCTTTCTCAGGCTTGGACTGTCCC...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTGAGTAACAAGAACTaGAGCAGCGGGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMLSNKN*SSGRWE
Trigger: CTCCCACCTCCCGCTGCTGCAGTTCTTGTTACTCAA...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCAAGAGATACTGCAGGTaGGACAGTCCTGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSKRYCR*DSPVKA
Trigger: CGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTT...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306317.7
CDS-3UTR GCA 90 bp GTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCAAGGATCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VSGQCLQVIVGQREVSQGSLGSV*RLLLAS
Trigger: GCTGGCCAACAATAACCTGCAGACACTGCCCAGAGA...TCCTTGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR GCA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTATACAAGGGCATGAATaGAGGTTGGTCGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: AKENRDRHPWQLPGIASAIQGHE*RLVACL
Trigger: AAGACAAGCGACCAACCTGCATTCATGCCCTTGTAT...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCACTGAATCTGCTTGTATaGACACGTGCCCTGACATGT +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPLNLLV*TRALTC
Trigger: ACATGTCAGGGCACGTGTGCATACAAGCAGATTCAG...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACTCTGCAGGTTATTGTTaGCCAGCGAGAGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHSAGYC*PARGES
Trigger: TGACTCACCTCTCGCTGGCCAACAATAACCTGCAGA...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306317.7
CDS-3UTR CCA 90 bp GTCAAGGACTTGAGTCCTCGGAAGGTGAACTTGGATAGTGCCCAGATGTCATTGGTGCCACCGTGGTGTTaGTGTGTGCCAGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: VKDLSPRKVNLDSAQMSLVPPWC*CVPATP
Trigger: TGGAGTGGCTGGCACACACCAACACCACGGTGGCAC...CAATGACATCTGGGCACTATCCAAGTTCACCTTCCGAGGACTCAAGTCCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACTGCACAGCCAGCTCCTaGAACCGTACAAACTTCTGT +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHCTASS*NRTNFC
Trigger: ACAGAAGTTTGTACGGTTCCAGGAGCTGGCTGTGCA...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
3UTR CAA 72 bp ACCAACCACTTCACCTTGCAGTCACAGTTGAGTGAGTaGCCCCGCAGGTCCAAGTCATTCAGGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TNHFTLQSQLSE*PRRSKSFRMSR
Trigger: CCTGGACATCCTGAATGACTTGGACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGTGAAGTGGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR TCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGTCCATCCTGGATCTCTaGGAAGGCGGCATTCACCAG +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVSILDL*EGGIHQ
Trigger: CTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGA...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCATATGCACACGTGCCCTaGCATGTTTATAGATGGACA +
Preference number: 4 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPYAHVP*HVYRWT
Trigger: TGTCCATCTATAAACATGTCAGGGCACGTGTGCATA...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGTCTTCTGTCCATGGGTaGGCTGGGATTCACGGCCAT +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVSSVHG*AGIHGH
Trigger: ATGGCCGTGAATCCCAGCTCACCCATGGACAGAAGA...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR TCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGATCCCAAAGACAGGGTaGACCAGGGGACAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVIPKTG*TRGQSK
Trigger: CTTGGACTGTCCCCTGGTTCACCCTGTCTTTGGGAT...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTCTCTTAGCGCTGACTTaGAGCATGAGGCAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFLLALT*SMRQKP
Trigger: CGGCTTCTGCCTCATGCTGCAAGTCAGCGCTAAGAG...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTACCAGTCACCGTCGATaGGGAAGGCTTCTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFTSHRR*GRLLGR
Trigger: ACGACCTAGAAGCCTTCCGCATCGACGGTGACTGGT...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACCGGGATTGCTTCTGCTaGTGTTGTTATTGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNRDCFC*CCYCFG
Trigger: CCCGAAGCAATAACAACAGCAGCAGAAGCAATCCCG...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGCGGGATTGCTTCTGCTaGTGTTGTTATTGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMRDCFC*CCYCFG
Trigger: CCCGAAGCAATAACAACAGCAGCAGAAGCAATCCCG...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAGTACCCTGGTATCCTaGTACAAGGAGCATCACACC +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNSTLVS*YKEHHT
Trigger: GGTGTGATGCTCCTTGTAGCAGGATACCAGGGTACT...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCAGTACCCTGGTATCCTaGTACAAGGAGCATCACACC +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSSTLVS*YKEHHT
Trigger: GGTGTGATGCTCCTTGTAGCAGGATACCAGGGTACT...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp AGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCAGCCGGAAGATGTCTCTaGGCAGTGTCTGCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: RCLWAVSAGYCWPARGESAGRCL*AVSAGY
Trigger: ATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC...TGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCGGGAAGGCCAGGGTCTaGTACAACACAAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSGKARV*YNTKSV
Trigger: CACAGATTTTGTGTTGTACCAGACCCTGGCCTTCCC...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGCCAAATAGAGGTCACTaGAGTAGAGGAAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMPNRGH*SRGRAQ
Trigger: CTGAGCCCTTCCTCTACTCCAGTGACCTCTATTTGG...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCCAAATAGAGGTCACTaGAGTAGAGGAAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSPNRGH*SRGRAQ
Trigger: CTGAGCCCTTCCTCTACTCCAGTGACCTCTATTTGG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACTCTGCAGGTTATTGTTaGCCAGCGAGAGATACTGCA +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHSAGYC*PARDTA
Trigger: TGCAGTATCTCTCGCTGGCCAACAATAACCTGCAGA...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS-3UTR TCA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACTGTCATTGTTCTCAATaGAGAGATACTGCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHCHCSQ*RDTAGA
Trigger: CGCACCTGCAGTATCTCTTCATTGAGAACAATGACA...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306317.7
CDS-3UTR GCA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCGGTGTTCATGCTGATTaGAGTGATGATGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: GILLQGASHHLGTWCALSGVHAD*SDDARP
Trigger: AGGACGTGCATCATCACTGCAATCAGCATGAACACC...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTGCAGCTCCCCGGGATTaGTTCTGCTGCTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFAAPRD*FCCCCY
Trigger: ATAACAACAGCAGCAGAAGCAATCCCGGGGAGCTGC...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGGCAGCTCCCCGGGATTaGTTCTGCTGCTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVAAPRD*FCCCCY
Trigger: ATAACAACAGCAGCAGAAGCAATCCCGGGGAGCTGC...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CCA 90 bp AACCACTTCACCTTGCAGTCACAGTTGAGTGAGTTGCCCCGCAGGTCCAAGTCATCTGCAGGTTATTGTTaGCCAGCGAGAGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: NHFTLQSQLSELPRRSKSSAGYC*PARGES
Trigger: TGACTCACCTCTCGCTGGCCAACAATAACCTGCAGA...TGACTTGGACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGTGAAGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGGAGCATCACACCATTTaGGCACATGGTGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVEHHTI*AHGVPS
Trigger: AGAGGGCACACCATGTGCCCAAATGGTGTGATGCTC...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AACCACTTCACCTTGCAGTCACAGTTGAGTGAGTTGCCCCGCAGGTCCAAGTCATCAATGAAGAGATACTaGAGGTGCGACAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: NHFTLQSQLSELPRRSKSSMKRY*RCDSPV
Trigger: CACAGGACTGTCGCACCTGCAGTATCTCTTCATTGA...TGACTTGGACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGTGAAGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR GCA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGATACAAGGGCATGAATaGAGGTTGGTCGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ESLVGSAESACMHTCPDMIQGHE*RLVACL
Trigger: AAGACAAGCGACCAACCTGCATTCATGCCCTTGTAT...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGTGCTGCTGTTGTTATTaGTTCGGGCAGAGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVCCCCY*FGQRGF
Trigger: AAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCA...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTAGAGCAGGTAAACAATaGCTGGAGCACCAACAGGAA +
Preference number: 4 (lower is better)
Translates to: SLVGSAESACMHTCPDMFRAGKQ*LEHQQE
Trigger: TTCCTGTTGGTGCTCCAGGCATTGTTTACCTGCTCT...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGAGAGCAGGTAAACAATaGCTGGAGCACCAACAGGAA +
Preference number: 4 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVRAGKQ*LEHQQE
Trigger: TTCCTGTTGGTGCTCCAGGCATTGTTTACCTGCTCT...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR GCA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACGCTTGTATGCACACGTaGCCTGACATGTTTATAGAT +
Preference number: 4 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNACMHT*PDMFID
Trigger: ATCTATAAACATGTCAGGGCACGTGTGCATACAAGC...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS GCA 90 bp CACCTCCCTGCCACCGGCAGCTGCTACCGCAGCCAGGGGCCCGCCTaGGGACTCCTCCTGCCCTCGGGCGCCGGCTGCGGTCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: HLPATGSCYRSQGPA*GLLLPSGAGCGPLP
Trigger: GGGGAGGGGACCGCAGCCGGCGCCCGAGGGCAGGAGGAGTCCGCAGGCGGGCCCCTGGCTGCGGTAGCAGCTGCCGGTGGCAGGGAGGTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 90 bp GCTGGGCCACCCCGCGCGGGCTGGCACCTCCCTGCCACCGGCAGCTaGTACCGCAGCCAGGGGCCCGCCTGCGGACTCCTCCTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: AGPPRAGWHLPATGS*YRSQGPACGLLLPS
Trigger: CGAGGGCAGGAGGAGTCCGCAGGCGGGCCCCTGGCTGCGGTAGCAGCTGCCGGTGGCAGGGAGGTGCCAGCCCGCGCGGGGTGGCCCAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 90 bp TGCGGACTCCTCCTGCCCTCGGGCGCCGGCTGCGGTCCCCTCCCCTaGTCGCTCCCGCGATCCGGCTCGGGAGAGAAGAGCGGAGCGCGG +
Preference number: 5 (lower is better)
Translates to: CGLLLPSGAGCGPLP*SLPRSGSGEKSGAR
Trigger: CCGCGCTCCGCTCTTCTCTCCCGAGCCGGATCGCGGGAGCGAGCAGGGGAGGGGACCGCAGCCGGCGCCCGAGGGCAGGAGGAGTCCGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000520124.5
CDS TCA 90 bp ACGTGGTGCTCACAGAGGCCCCCACCCATCCTCCAGTGGCCACCCTaGGGAGACCAGAGGCCTCGGCACCCCCTAGGCACTGAGATCCAC +
Preference number: 5 (lower is better)
Translates to: TWCSQRPPPILQWPP*GDQRPRHPLGTEIH
Trigger: GTGGATCTCAGTGCCTAGGGGGTGCCGAGGCCTCTGGTCTCCTCAGGGTGGCCACTGGAGGATGGGTGGGGGCCTCTGTGAGCACCACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CCA 90 bp CCTGCACCTTGTGCTCCTGGAAGCGGGGCGGGCTGGCGCAGTAGATaGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCACTCCACCAACC +
Preference number: 5 (lower is better)
Translates to: PAPCAPGSGAGWRSR*VPPWCWCVPATPPT
Trigger: GGTTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAGCACAAGGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000520124.5
CDS TCA 90 bp GGTCAGGGAGATGACCTCCGAGGGCAGGTTCCTGGGCACCGCCTTTaGGTCCACGCAGAAGGCGGTGTCCCTGGTGCAAGAGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: GQGDDLRGQVPGHRL*VHAEGGVPGARAAG
Trigger: CCCAGCTGCTCTTGCACCAGGGACACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGGAACCTGCCCTCGGAGGTCATCTCCCTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTGGCAGGTCCTGCACCTaGTGCTCCTGGAAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: VVIASGRGALPPGGQAGPGRSCT*CSWKRG
Trigger: GCCCCGCTTCCAGGAGCACAAGGTGCAGGACCTGCC...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS TCA 90 bp TGTGAGGGAGATGACCTCCGAGGGCAGGTTCCTGGGCACCGCCTTTaGGTCCACGCAGAAGGCGGTGTCCCTGGTGCAAGAGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: CEGDDLRGQVPGHRL*VHAEGGVPGARAAG
Trigger: CCCAGCTGCTCTTGCACCAGGGACACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGGAACCTGCCCTCGGAGGTCATCTCCCTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518365.1
ENST00000520124.5
CDS GCA 90 bp CACCTTGTGCTCCTGGAAGCGGGGCGGGCTGGCGCAGTAGATGGGTaGCACCGTGGTGTTGGTGTGTGCCAGCCACTCCACCAACCACTT +
Preference number: 5 (lower is better)
Translates to: HLVLLEAGRAGAVDG*HRGVGVCQPLHQPL
Trigger: AAGTGGTTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAGCACAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000520124.5
CDS-3UTR CAA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGTCCTGGGCACCGCCTTaGAGTCCACGCAGAAGGCGG +
Preference number: 5 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLSWAPP*SPRRRR
Trigger: CCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGGA...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGGGTGCCACCGTGGTGTaGGTGTGTGCCAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLGATVV*VCASHS
Trigger: GGAGTGGCTGGCACACACCAACACCACGGTGGCACC...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTGGTGCCACCGTGGTGTaGGTGTGTGCCAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: VVIASGRGALPPGGQAGPGATVV*VCASHS
Trigger: GGAGTGGCTGGCACACACCAACACCACGGTGGCACC...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GCCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTCTGGTGGCGCCTGCCTaGGAGCTGTCAGCCACGGCA +
Preference number: 5 (lower is better)
Translates to: AKENRDRHPWQLPGIASALVAPA*ELSATA
Trigger: TGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAG...AGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS TCA 90 bp GAACTGCAGCAGCGGGAGGTGGGAGAACGCTCCATCCTGGATCTCTaGGAAGGCGGCATTCACCAGGGTCCTGCGGGGACACCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: ELQQREVGERSILDL*EGGIHQGPAGTPES
Trigger: TGACTCGGGTGTCCCCGCAGGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518365.1
ENST00000520124.5
CDS GCA 90 bp GCCGTCCACAAACTCCAGGTCGGTGTCACGGTGCCAGGGGTGCAGTaGCTGGTGGGAGTAGAAGCCATTCTGGTGCCAGCGGTAGAGGCT +
Preference number: 5 (lower is better)
Translates to: AVHKLQVGVTVPGVQ*LVGVEAILVPAVEA
Trigger: AGCCTCTACCGCTGGCACCAGAATGGCTTCTACTCCCACCAGGCACTGCACCCCTGGCACCGTGACACCGACCTGGAGTTTGTGGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS-3UTR CAA 90 bp GGGCGGGCTGGCGCAGTAGATGGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCATCACAGTTGAGTGAGTaGCCCCGCAGGTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: GRAGAVDGCHRGVGVCQPSQLSE*PRRSKS
Trigger: TGACTTGGACCTGCGGGGCAACTCACTCAACTGTGA...TGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp TTCTGCTGCTGTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAGGCAGGTCCTGCACCTaGTGCTCCTGGAAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: FCCCCYCFGQRGFAPRRPGRSCT*CSWKRG
Trigger: GCCCCGCTTCCAGGAGCACAAGGTGCAGGACCTGCC...TGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTCCACCACCATCGGCTaGCAGTGCACTGCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: VVIASGRGALPPGGQAGPSTTIG*QCTAEG
Trigger: CCCCTCTGCAGTGCACTGCAAGCCGATGGTGGTGGA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTTCTAGGTCGTTAGGCTaGCGCACGCGCTGCGGGTCA +
Preference number: 5 (lower is better)
Translates to: VVIASGRGALPPGGQAGPSRSLG*RTRCGS
Trigger: TGACCCGCAGCGCGTGCGCAAGCCTAACGACCTAGA...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS TCA 90 bp GAACTGCAGCAGCGGGAGGTGGGAGAACGCTCCATCCTGGATCTCTaGGAAGGCGGCATTCACCAGGGTCAGGGAGATGACCTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: ELQQREVGERSILDL*EGGIHQGQGDDLRG
Trigger: CCCTCGGAGGTCATCTCCCTGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS TCA 90 bp GGGTACCCTCCCAGCGCAGGATCTTGGAGTCGCCAATGTAGCGGCTaGGGCACAGGTAGCTGTCGCGGCCGGCACGAAAGTGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: GYPPSAGSWSRQCSG*GTGSCRGRHESVSQ
Trigger: CTGTGAAACACTTTCGTGCCGGCCGCGACAGCTACCTGTGCCTCAGCCGCTACATTGGCGACTCCAAGATCCTGCGCTGGGAGGGTACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 90 bp CCGTCGATGCGGAAGGCTTCTAGGTCGTTAGGCTTGCGCACGCGCTaGGGGTCAATGTCTTGCAGCCTGGTGAAGCGCGTGGTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: PSMRKASRSLGLRTR*GSMSCSLVKRVVLG
Trigger: TCCCAACACCACGCGCTTCACCAGGCTGCAAGACATTGACCCGCAGCGCGTGCGCAAGCCTAACGACCTAGAAGCCTTCCGCATCGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 90 bp GGCCACAAACTGCTTCTGGGTGCGACTCCACTGATAGATGACGGGTaGCTGGGAGCTGCTGGACACAATCAGCCGTGGCTTGCCCTCGCC +
Preference number: 5 (lower is better)
Translates to: GHKLLLGATPLIDDG*LGAAGHNQPWLALA
Trigger: GGCGAGGGCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAGTGGAGTCGCACCCAGAAGCAGTTTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 90 bp ACGCTCCATCCTGGATCTCTGAGAAGGCGGCATTCACCAGGGTCCTaGGGGGACACCCGAGTCAGTACTGTGGGGTCTGCAAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: TLHPGSLRRRHSPGS*GDTRVSTVGSARAV
Trigger: CACAGCCCTTGCAGACCCCACAGTACTGACTCGGGTGTCCCCGCAGGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518365.1
ENST00000520124.5
CDS CCA 90 bp AGAAGCCATTCTGGTGCCAGCGGTAGAGGCTGGTGGCGCCTGCCTTaGAGCTGTCAGCCACGGCAAAGTACCAGTCACCGTCGATGCGGA +
Preference number: 5 (lower is better)
Translates to: RSHSGASGRGWWRLP*SCQPRQSTSHRRCG
Trigger: TCCGCATCGACGGTGACTGGTACTTTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGCACCAGAATGGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CCA 90 bp CTGATAGATGACGGGTGCCTGGGAGCTGCTGGACACAATCAGCCGTaGCTTGCCCTCGCCGTCCACAAACTCCAGGTCGGTGTCACGGTG +
Preference number: 5 (lower is better)
Translates to: LIDDGCLGAAGHNQP*LALAVHKLQVGVTV
Trigger: CACCGTGACACCGACCTGGAGTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS-3UTR CAA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGCCTCTTAGCGCTGACTaGCAGCATGAGGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: SQHPAPLVHETGGRAWERPLSAD*QHEAEA
Trigger: GGCTTCTGCCTCATGCTGCAAGTCAGCGCTAAGAGG...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS TCA 90 bp CACCCTGGGCCACAAACTGCTTCTGGGTGCGACTCCACTGATAGATaGCGGGTGCCTGGGAGCTGCTGGACACAATCAGCCGTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: HPGPQTASGCDSTDR*RVPGSCWTQSAVAC
Trigger: GCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAGTGGAGTCGCACCCAGAAGCAGTTTGTGGCCCAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS TCA 90 bp GAACTGCAGCAGCGGGAGGTGGGAGAACGCTCCATCCTGGATCTCTaGGAAGGCGGCATTCACCAGGGTCCTGTCTCTGCACGGGCACAT +
Preference number: 5 (lower is better)
Translates to: ELQQREVGERSILDL*EGGIHQGPVSARAH
Trigger: ATGTGCCCGTGCAGAGACAGGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517694.1
CDS GCA 90 bp GGAGTAGAAGCCATTCTGGTGCCAGCGGTAGAGGCTGGTGGCGCCTaGCTTGGAGCTGTCAGCCACGGCAAAGTACCAGTCACCGTCGAT +
Preference number: 5 (lower is better)
Translates to: GVEAILVPAVEAGGA*LGAVSHGKVPVTVD
Trigger: ATCGACGGTGACTGGTACTTTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGCACCAGAATGGCTTCTACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CCA 90 bp CACCAGGGTCCTGTCTCTGCACGGGCACATGCACTCACTGCCTTGTaGAGGCGCTTCGGCGTTAGGGATCCCTGTGCTTCTGTCTACCTG +
Preference number: 5 (lower is better)
Translates to: HQGPVSARAHALTAL*RRFGVRDPCASVYL
Trigger: CAGGTAGACAGAAGCACAGGGATCCCTAACGCCGAAGCGCCTCCACAAGGCAGTGAGTGCATGTGCCCGTGCAGAGACAGGACCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517694.1
CDS CCA 90 bp CCATACAAGAACTGCAGCAGCGGGAGGTGGGAGAACGCTCCATCCTaGATCTCTGAGAAGGCGGCATTCACCAGGGTCCTGCGGGGACAC +
Preference number: 5 (lower is better)
Translates to: PYKNCSSGRWENAPS*ISEKAAFTRVLRGH
Trigger: GTGTCCCCGCAGGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS-3UTR CAA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGCCTCTTAGCGCTGACTaGCAGCATGAGGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLPLSAD*QHEAEA
Trigger: GGCTTCTGCCTCATGCTGCAAGTCAGCGCTAAGAGG...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACTCCTGGGCACCGCCTTaGAGTCCACGCAGAAGGCGG +
Preference number: 5 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHSWAPP*SPRRRR
Trigger: CCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGGA...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp AGTGATGATGCACGTCCTCCTGGGCCAGTCCACGGGGTGCGCCTGTACACACTGACCTTGCAGTCACAGTaGAGTGAGTTGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SDDARPPGPVHGVRLYTLTLQSQ*SELPRR
Trigger: CCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGT...CAGTGTGTACAGGCGCACCCCGTGGACTGGCCCAGGAGGACGTGCATCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGTCTAGGTCGTTAGGCTaGCGCACGCGCTGCGGGTCA +
Preference number: 5 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSSRSLG*RTRCGS
Trigger: TGACCCGCAGCGCGTGCGCAAGCCTAACGACCTAGA...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCTGGTGGCGCCTGCCTaGGAGCTGTCAGCCACGGCA +
Preference number: 5 (lower is better)
Translates to: GILLQGASHHLGTWCALSLVAPA*ELSATA
Trigger: TGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GTGTGTAATGAGTGTGTCCGTCCGCGTCCATGTGAGCATGCAGACGGGGTGGGGACAATCAGCCGTGGCTaGCCCTCGCCGTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: VCNECVRPRPCEHADGVGTISRG*PSPSTN
Trigger: GTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTGT...CCCCACCCCGTCTGCATGCTCACATGGACGCGGACGGACACACTCATTACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS GCA 90 bp GCTGGGCCACGACCACGTACAGCTGGCTGTCCACCACCATCGGCTTaGAGTGCACTGCAGAGGGGGCTGGGATTCTATCATAGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: AGPRPRTAGCPPPSA*SALQRGLGFYHSLE
Trigger: TTCGAGACTATGATAGAATCCCAGCCCCCTCTGCAGTGCACTGCAAGCCGATGGTGGTGGACAGCCAGCTGTACGTGGTCGTGGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CCA 90 bp AGTAACAAGAACTGCAGCAGCGGGAGGTGGGAGAACGCTCCATCCTaGATCTCTGAGAAGGCGGCATTCACCAGGGTCCTGCGGGGACAC +
Preference number: 5 (lower is better)
Translates to: SNKNCSSGRWENAPS*ISEKAAFTRVLRGH
Trigger: GTGTCCCCGCAGGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp GGGCGGGCTGGCGCAGTAGATGGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCAAGTCCTGTGAAGGCGTaGTCTCCAATCAGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: GRAGAVDGCHRGVGVCQPSPVKA*SPISVN
Trigger: GTTTACACTGATTGGAGACAACGCCTTCACAGGACT...TGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACTCCACCACCATCGGCTaGCAGTGCACTGCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHSTTIG*QCTAEG
Trigger: CCCCTCTGCAGTGCACTGCAAGCCGATGGTGGTGGA...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGCTGCGGGTCAATGTCTaGCAGCCTGGTGAAGCGCGT +
Preference number: 5 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSLRVNV*QPGEAR
Trigger: ACGCGCTTCACCAGGCTGCAAGACATTGACCCGCAG...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGACAATCAGCCGTGGCTaGCCCTCGCCGTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSTISRG*PSPSTN
Trigger: GTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTGT...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GCCCTCAGGCCAAGCTCCACTCTGGGCACCCTCGCAGGTAACTCAGGTGCTTGCGGGCATGAATGCAGGTaGGTCGCTTGTCTTCACACA +
Preference number: 5 (lower is better)
Translates to: ALRPSSTLGTLAGNSGACGHECR*VACLHT
Trigger: TGTGTGAAGACAAGCGACCAACCTGCATTCATGCCC...GCAAGCACCTGAGTTACCTGCGAGGGTGCCCAGAGTGGAGCTTGGCCTGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp TTGAGTGAGTTGCCCCGCAGGTCCAAGTCATTCAGGATGTCCAGGGGCCGGAAGCCTCTTAGCGCTGACTaGCAGCATGAGGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: LSELPRRSKSFRMSRGRKPLSAD*QHEAEA
Trigger: GGCTTCTGCCTCATGCTGCAAGTCAGCGCTAAGAGG...CTTCCGGCCCCTGGACATCCTGAATGACTTGGACCTGCGGGGCAACTCACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGCTGCTGCTGTTGTTATaGCTTCGGGCAGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLLLLLL*LRAEGL
Trigger: AAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAG...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTGTCTGCAGGTTATTGTaGGCCAGCGAGAGATACTGC +
Preference number: 5 (lower is better)
Translates to: VVIASGRGALPPGGQAGPVCRLL*ASERYC
Trigger: GCAGTATCTCTCGCTGGCCAACAATAACCTGCAGAC...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS CCA 90 bp AGTAACAAGAACTGCAGCAGCGGGAGGTGGGAGAACGCTCCATCCTaGATCTCTGAGAAGGCGGCATTCACCAGGGTCAGGGAGATGACC +
Preference number: 5 (lower is better)
Translates to: SNKNCSSGRWENAPS*ISEKAAFTRVREMT
Trigger: GGTCATCTCCCTGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS CCA 90 bp AGTAACAAGAACTGCAGCAGCGGGAGGTGGGAGAACGCTCCATCCTaGATCTCTGAGAAGGCGGCATTCACCAGGGTCCTGTCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SNKNCSSGRWENAPS*ISEKAAFTRVLSLH
Trigger: GTGCAGAGACAGGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517694.1
CDS CCA 90 bp CCTTCCACAAGGCCCTATCCATACAAGAACTGCAGCAGCGGGAGGTaGGAGAACGCTCCATCCTGGATCTCTGAGAAGGCGGCATTCACC +
Preference number: 5 (lower is better)
Translates to: PSTRPYPYKNCSSGR*ENAPSWISEKAAFT
Trigger: GGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTATGGATAGGGCCTTGTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CCA 90 bp TTCCTGGGATCACCTGTCTCTAAGATGGCCCCACAGTGCCCACCTTaGGCACTAGCCCAGGCTATCGCACCCAATTCTCTGGGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: FLGSPVSKMAPQCPP*ALAQAIAPNSLGFP
Trigger: TGGAAACCCCAGAGAATTGGGTGCGATAGCCTGGGCTAGTGCCCAAGGTGGGCACTGTGGGGCCATCTTAGAGACAGGTGATCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS-3UTR CAA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGTCACAGTTGAGTGAGTaGCCCCGCAGGTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQSQLSE*PRRSKS
Trigger: TGACTTGGACCTGCGGGGCAACTCACTCAACTGTGA...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTACCTTGCAGTCACAGTaGAGTGAGTTGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: AGRCLWAVSAGYCWPARGTLQSQ*SELPRR
Trigger: CCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGT...ACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp GGTATCCTGCTACAAGGAGCATCACACCATTTGGGCACATGGTGTGCCCTCTCCCTGCGGGTCAATGTCTaGCAGCCTGGTGAAGCGCGT +
Preference number: 5 (lower is better)
Translates to: GILLQGASHHLGTWCALSLRVNV*QPGEAR
Trigger: ACGCGCTTCACCAGGCTGCAAGACATTGACCCGCAG...GGAGAGGGCACACCATGTGCCCAAATGGTGTGATGCTCCTTGTAGCAGGATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGCTGCTGCTGTTGTTATaGCTTCGGGCAGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSLLLLL*LRAEGL
Trigger: AAGCCCCTCTGCCCGAAGCAATAACAACAGCAGCAG...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS TCA 90 bp GAAGCTGCCGCTCAACATAGTCCCACTTCAGGATGGTGCAGGCACTaGCTCCTGGCTGGGCCAGAGCCAAATAGAGGTCACTGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: EAAAQHSPTSGWCRH*LLAGPEPNRGHWSR
Trigger: TCTACTCCAGTGACCTCTATTTGGCTCTGGCCCAGCCAGGAGTCAGTGCCTGCACCATCCTGAAGTGGGACTATGTTGAGCGGCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 90 bp CATAGTTCCCCCAACCCTTCCACAAGGCCCTATCCATACAAGAACTaGAGCAGCGGGAGGTGGGAGAACGCTCCATCCTGGATCTCTGAG +
Preference number: 5 (lower is better)
Translates to: HSSPNPSTRPYPYKN*SSGRWENAPSWISE
Trigger: CTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTATGGATAGGGCCTTGTGGAAGGGTTGGGGGAACTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS-3UTR CAA 90 bp GAGAGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGACCTTGCAGTCACAGTaGAGTGAGTTGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: ESLVGSAESACMHTCPDMTLQSQ*SELPRR
Trigger: CCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGT...CATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GTCAAGGACTTGAGTCCTCGGAAGGTGAACTTGGATAGTGCCCAGATGTCATTGGGTGCCACCGTGGTGTaGGTGTGTGCCAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: VKDLSPRKVNLDSAQMSLGATVV*VCASHS
Trigger: GGAGTGGCTGGCACACACCAACACCACGGTGGCACC...CAATGACATCTGGGCACTATCCAAGTTCACCTTCCGAGGACTCAAGTCCTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGGGGCATGAATGCAGGTaGGTCGCTTGTCTTCACACA +
Preference number: 5 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSGHECR*VACLHT
Trigger: TGTGTGAAGACAAGCGACCAACCTGCATTCATGCCC...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS TCA 90 bp TCCTGCCATCCCTTTCTTTCAGCCCCCAGCTCTTTCTGGGAACTCTaGTTCCTGGGATCACCTGTCTCTAAGATGGCCCCACAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: SCHPFLSAPSSFWEL*FLGSPVSKMAPQCP
Trigger: TGGGCACTGTGGGGCCATCTTAGAGACAGGTGATCCCAGGAATCAGAGTTCCCAGAAAGAGCTGGGGGCTGAAAGAAAGGGATGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS GCA 90 bp TCATTCAGGATGTCCAGGGGCCGGAAGATGTCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGCGAGAGATACTGCAGGTGCGACAGT +
Preference number: 5 (lower is better)
Translates to: SFRMSRGRKMSLGSV*RLLLASERYCRCDS
Trigger: ACTGTCGCACCTGCAGTATCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCTGGACATCCTGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS-3UTR CAA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACCCTCGGAAGGTGAACTaGGATAGTGCCCAGATGTCA +
Preference number: 5 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHPRKVN*DSAQMS
Trigger: TGACATCTGGGCACTATCCAAGTTCACCTTCCGAGG...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306317.7
CDS CCA 90 bp CCCCAGCCTAGATTTCAGCCCGTGTCCCCGAGACAGGTTTCCAAATaGAGTCTGGCATCACCAAGCCATAGAGATAGAGCATCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: PQPRFQPVSPRQVSK*SLASPSHRDRASGR
Trigger: CCTACCTGATGCTCTATCTCTATGGCTTGGTGATGCCAGACTCCATTTGGAAACCTGTCTCGGGGACACGGGCTGAAATCTAGGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS-3UTR CAA 90 bp TCCCAGCACCCCGCACCACTCGTGCATGAGACAGGGGGCAGAGCATGGGAAAGGCCAATCAGTGTAAACTaGTTGGAGTTGAGTAACAAG +
Preference number: 5 (lower is better)
Translates to: SQHPAPLVHETGGRAWERPISVN*LELSNK
Trigger: CTTGTTACTCAACTCCAACAAGTTTACACTGATTGG...CCTTTCCCATGCTCTGCCCCCTGTCTCATGCACGAGTGGTGCGGGGTGCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGAGTCCTGTGAAGGCGTaGTCTCCAATCAGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQSPVKA*SPISVN
Trigger: GTTTACACTGATTGGAGACAACGCCTTCACAGGACT...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GTTGTTATTGCTTCGGGCAGAGGGGCTTTGCCCCCAGGAGGCCAAGCAGGCCCTAGTGCCCAGATGTCATaGTTCTCAATGAAGAGATAC +
Preference number: 5 (lower is better)
Translates to: VVIASGRGALPPGGQAGPSAQMS*FSMKRY
Trigger: GTATCTCTTCATTGAGAACAATGACATCTGGGCACT...AGGGCCTGCTTGGCCTCCTGGGGGCAAAGCCCCTCTGCCCGAAGCAATAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306317.7
CDS-3UTR CAA 90 bp CGCAGTAGATGGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCACTCCACCAACCAGTGCCCAGATGTCATaGTTCTCAATGAAGAGATAC +
Preference number: 5 (lower is better)
Translates to: RSRWVPPWCWCVPATPPTSAQMS*FSMKRY
Trigger: GTATCTCTTCATTGAGAACAATGACATCTGGGCACT...GGTTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp TACAAGGGCATGAATGCAGGTTGGTCGCTTGTCTTCACACAGGCATACGTGGTGGGCAGCTCCCCGGGATaGCTTCTGCTGCTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: YKGMNAGWSLVFTQAYVVGSSPG*LLLLLL
Trigger: TAACAACAGCAGCAGAAGCAATCCCGGGGAGCTGCC...CACCACGTATGCCTGTGTGAAGACAAGCGACCAACCTGCATTCATGCCCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTGGCAGCTCCCCGGGATaGCTTCTGCTGCTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: SLVGSAESACMHTCPDMFGSSPG*LLLLLL
Trigger: TAACAACAGCAGCAGAAGCAATCCCGGGGAGCTGCC...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS CCA 90 bp GTAAACTTGTTGGAGTTGAGTAACAAGAACTGCAGCAGCGGGAGGTaGGAGAACGCTCCATCCTGGATCTCTGAGAAGGCGGCATTCACC +
Preference number: 5 (lower is better)
Translates to: VNLLELSNKNCSSGR*ENAPSWISEKAAFT
Trigger: GGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTTACTCAACTCCAACAAGTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000518365.1
CDS-3UTR CAA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGGTAAACTTGTTGGAGTaGAGTAACAAGAACTGCAGC +
Preference number: 5 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLVNLLE*SNKNCS
Trigger: GCTGCAGTTCTTGTTACTCAACTCCAACAAGTTTAC...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTTCACAGTTGAGTGAGTaGCCCCGCAGGTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: SLVGSAESACMHTCPDMFSQLSE*PRRSKS
Trigger: TGACTTGGACCTGCGGGGCAACTCACTCAACTGTGA...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAGTGTCTGCAGGTTATaGTTGGCCAGCGAGAGATAC +
Preference number: 5 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNSVCRL*LASERY
Trigger: GTATCTCTCGCTGGCCAACAATAACCTGCAGACACT...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS-3UTR CAA 90 bp CGCCTGTACACACTGGGCGTGTGCGGATACAAGGGCATGAATGCAGGTTGGTCGGTAAACTTGTTGGAGTaGAGTAACAAGAACTGCAGC +
Preference number: 5 (lower is better)
Translates to: RLYTLGVCGYKGMNAGWSVNLLE*SNKNCS
Trigger: GCTGCAGTTCTTGTTACTCAACTCCAACAAGTTTAC...CGACCAACCTGCATTCATGCCCTTGTATCCGCACACGCCCAGTGTGTACAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GGTCACGGGAACTGGGCGTTAGGTGTCCCAGGGGTGCCTGGTGTTCATGCTGATCCAATCAGTGTAAACTaGTTGGAGTTGAGTAACAAG +
Preference number: 5 (lower is better)
Translates to: GHGNWALGVPGVPGVHADPISVN*LELSNK
Trigger: CTTGTTACTCAACTCCAACAAGTTTACACTGATTGG...ATCAGCATGAACACCAGGCACCCCTGGGACACCTAACGCCCAGTTCCCGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GGAAGCATGACAGATATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAGTCCTGTGAAGGCGTaGTCTCCAATCAGTGTAAAC +
Preference number: 5 (lower is better)
Translates to: GSMTDMAVGYSGEQEQVNSPVKA*SPISVN
Trigger: GTTTACACTGATTGGAGACAACGCCTTCACAGGACT...GTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATATCTGTCATGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GTCAAGGACTTGAGTCCTCGGAAGGTGAACTTGGATAGTGCCCAGATGTCATTGCCTCGGAAGGTGAACTaGGATAGTGCCCAGATGTCA +
Preference number: 5 (lower is better)
Translates to: VKDLSPRKVNLDSAQMSLPRKVN*DSAQMS
Trigger: TGACATCTGGGCACTATCCAAGTTCACCTTCCGAGG...CAATGACATCTGGGCACTATCCAAGTTCACCTTCCGAGGACTCAAGTCCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp CCAAGGAGAACAGAGACAGACACCCCTGGCAGCTCCCCGGGATTGCTTCTGCTGGCGGGAACTTTTTATTaGAAGCAAGTTAATCATAGC +
Preference number: 5 (lower is better)
Translates to: PRRTETDTPGSSPGLLLLAGTFY*KQVNHS
Trigger: GCTATGATTAACTTGCTTCAAATAAAAAGTTCCCGC...CAGCAGAAGCAATCCCGGGGAGCTGCCAGGGGTGTCTGTCTCTGTTCTCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCAAGGACTTGAGGTAAACTTGTTGGAGTaGAGTAACAAGAACTGCAGC +
Preference number: 5 (lower is better)
Translates to: GQCLQVIVGQREVSQGLEVNLLE*SNKNCS
Trigger: GCTGCAGTTCTTGTTACTCAACTCCAACAAGTTTAC...CTCAAGTCCTTGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp TCTCTAATCCACCCAAGGAGCCCGCCCAGCTCAAGGGCCACATCCCAAAGACAGATCAGTGTAAACTTGTaGGAGTTGAGTAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: SLIHPRSPPSSRATSQRQISVNL*ELSNKN
Trigger: GTTCTTGTTACTCAACTCCAACAAGTTTACACTGAT...CTGTCTTTGGGATGTGGCCCTTGAGCTGGGCGGGCTCCTTGGGTGGATTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp CCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGCCAATCAGTGTAAACTaGTTGGAGTTGAGTAACAAG +
Preference number: 5 (lower is better)
Translates to: PEDVSGQCLQVIVGQREVPISVN*LELSNK
Trigger: CTTGTTACTCAACTCCAACAAGTTTACACTGATTGG...CACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp TATGGCTGTGGGCTACAGCGGGGAGCAAGAGCAGGTAAACAATGCCTGGAGCACATCAGTGTAAACTTGTaGGAGTTGAGTAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: YGCGLQRGARAGKQCLEHISVNL*ELSNKN
Trigger: GTTCTTGTTACTCAACTCCAACAAGTTTACACTGAT...GTGCTCCAGGCATTGTTTACCTGCTCTTGCTCCCCGCTGTAGCCCACAGCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS-3UTR CAA 90 bp GGGCAGTGTCTGCAGGTTATTGTTGGCCAGCGAGAGGTGAGTCAAGGACTTGAGATCAGTGTAAACTTGTaGGAGTTGAGTAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: GQCLQVIVGQREVSQGLEISVNL*ELSNKN
Trigger: GTTCTTGTTACTCAACTCCAACAAGTTTACACTGAT...CTCAAGTCCTTGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518365.1
CDS-3UTR CAA 90 bp AGCCTGGTAGGCAGTGCTGAATCTGCTTGTATGCACACGTGCCCTGACATGTTTGCGGGAACTTTTTATTaGAAGCAAGTTAATCATAGC +
Preference number: 5 (lower is better)
Translates to: SLVGSAESACMHTCPDMFAGTFY*KQVNHS
Trigger: GCTATGATTAACTTGCTTCAAATAAAAAGTTCCCGC...AAACATGTCAGGGCACGTGTGCATACAAGCAGATTCAGCACTGCCTACCAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS GCA 72 bp GCCACCGGCAGCTGCTACCGCAGCCAGGGGCCCGCCTaGGGACTCCTCCTGCCCTCGGGCGCCGGCTGCGGT +
Preference number: 6 (lower is better)
Translates to: ATGSCYRSQGPA*GLLLPSGAGCG
Trigger: ACCGCAGCCGGCGCCCGAGGGCAGGAGGAGTCCGCAGGCGGGCCCCTGGCTGCGGTAGCAGCTGCCGGTGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp CCCCGCGCGGGCTGGCACCTCCCTGCCACCGGCAGCTaGTACCGCAGCCAGGGGCCCGCCTGCGGACTCCTC +
Preference number: 6 (lower is better)
Translates to: PRAGWHLPATGS*YRSQGPACGLL
Trigger: GAGGAGTCCGCAGGCGGGCCCCTGGCTGCGGTAGCAGCTGCCGGTGGCAGGGAGGTGCCAGCCCGCGCGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp CTCCTGCCCTCGGGCGCCGGCTGCGGTCCCCTCCCCTaGTCGCTCCCGCGATCCGGCTCGGGAGAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LLPSGAGCGPLP*SLPRSGSGEKS
Trigger: GCTCTTCTCTCCCGAGCCGGATCGCGGGAGCGAGCAGGGGAGGGGACCGCAGCCGGCGCCCGAGGGCAGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS TCA 72 bp TCACAGAGGCCCCCACCCATCCTCCAGTGGCCACCCTaGGGAGACCAGAGGCCTCGGCACCCCCTAGGCACT +
Preference number: 6 (lower is better)
Translates to: SQRPPPILQWPP*GDQRPRHPLGT
Trigger: AGTGCCTAGGGGGTGCCGAGGCCTCTGGTCTCCTCAGGGTGGCCACTGGAGGATGGGTGGGGGCCTCTGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp CTCCTGGAAGCGGGGCGGGCTGGCGCAGTAGATGGGTaGCACCGTGGTGTTGGTGTGTGCCAGCCACTCCAC +
Preference number: 6 (lower is better)
Translates to: LLEAGRAGAVDG*HRGVGVCQPLH
Trigger: GTGGAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000520124.5
CDS GCA 72 bp GTGGTGATGCAATCGAACTCCCGCAGCGGCAGGTCCTaGACCTTGTGCTCCTGGAAGCGGGGCGGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: VVMQSNSRSGRS*TLCSWKRGGLA
Trigger: CGCCAGCCCGCCCCGCTTCCAGGAGCACAAGGTGCAGGACCTGCCGCTGCGGGAGTTCGATTGCATCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000520124.5
CDS CCA 72 bp TGTGCTCCTGGAAGCGGGGCGGGCTGGCGCAGTAGATaGGTGCCACCGTGGTGTTGGTGTGTGCCAGCCACT +
Preference number: 6 (lower is better)
Translates to: CAPGSGAGWRSR*VPPWCWCVPAT
Trigger: AGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000520124.5
CDS GCA 72 bp GTCCTGCGGGGACACCCGAGTCAGTACTGTGGGGTCTaGAAGGGCTGTGAGGGAGATGACCTCCGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: VLRGHPSQYCGV*KGCEGDDLRGQ
Trigger: CTGCCCTCGGAGGTCATCTCCCTCACAGCCCTTGCAGACCCCACAGTACTGACTCGGGTGTCCCCGCAGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518365.1
ENST00000520124.5
CDS GCA 72 bp GGGAAAGCGGGAACTTGCCTCAGTGCTCACACAGGATaGCAGACCCCCAGCAGCACTCGCCCTACGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GKAGTCLSAHTG*QTPSSTRPTPQ
Trigger: CTGGGGCGTAGGGCGAGTGCTGCTGGGGGTCTGGCATCCTGTGTGAGCACTGAGGCAAGTTCCCGCTTTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CCA 72 bp GACGGGTGCCTGGGAGCTGCTGGACACAATCAGCCGTaGCTTGCCCTCGCCGTCCACAAACTCCAGGTCGGT +
Preference number: 6 (lower is better)
Translates to: DGCLGAAGHNQP*LALAVHKLQVG
Trigger: ACCGACCTGGAGTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CCA 72 bp TGGGCCAAGGCAGAGCTCTCTTGTCAAGCCAGCTCCTaGTCCTCCCGGGTGGCATCTCCTCTCCCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: WAKAELSCQASS*SSRVASPLPLP
Trigger: GGGGAGAGGGAGAGGAGATGCCACCCGGGAGGACCAGGAGCTGGCTTGACAAGAGAGCTCTGCCTTGGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS TCA 72 bp GATGACCTCCGAGGGCAGGTTCCTGGGCACCGCCTTTaGGTCCACGCAGAAGGCGGTGTCCCTGGTGCAAGA +
Preference number: 6 (lower is better)
Translates to: DDLRGQVPGHRL*VHAEGGVPGAR
Trigger: TCTTGCACCAGGGACACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGGAACCTGCCCTCGGAGGTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000518365.1
ENST00000520124.5
CDS TCA 72 bp CCCAGCGCAGGATCTTGGAGTCGCCAATGTAGCGGCTaGGGCACAGGTAGCTGTCGCGGCCGGCACGAAAGT +
Preference number: 6 (lower is better)
Translates to: PSAGSWSRQCSG*GTGSCRGRHES
Trigger: ACTTTCGTGCCGGCCGCGACAGCTACCTGTGCCTCAGCCGCTACATTGGCGACTCCAAGATCCTGCGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp GCCATTCTGGTGCCAGCGGTAGAGGCTGGTGGCGCCTaGCTTGGAGCTGTCAGCCACGGCAAAGTACCAGTC +
Preference number: 6 (lower is better)
Translates to: AILVPAVEAGGA*LGAVSHGKVPV
Trigger: GACTGGTACTTTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGCACCAGAATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp GTGCCTGGGAGCTGCTGGACACAATCAGCCGTGGCTTaGCCTCGCCGTCCACAAACTCCAGGTCGGTGTCAC +
Preference number: 6 (lower is better)
Translates to: VPGSCWTQSAVA*PRRPQTPGRCH
Trigger: GTGACACCGACCTGGAGTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CCA 72 bp TCTGGTGCCAGCGGTAGAGGCTGGTGGCGCCTGCCTTaGAGCTGTCAGCCACGGCAAAGTACCAGTCACCGT +
Preference number: 6 (lower is better)
Translates to: SGASGRGWWRLP*SCQPRQSTSHR
Trigger: ACGGTGACTGGTACTTTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGCACCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CCA 72 bp GGGAGTAGAAGCCATTCTGGTGCCAGCGGTAGAGGCTaGTGGCGCCTGCCTTGGAGCTGTCAGCCACGGCAA +
Preference number: 6 (lower is better)
Translates to: GSRSHSGASGRG*WRLPWSCQPRQ
Trigger: TTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGCACCAGAATGGCTTCTACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CAA 72 bp GGTGCCTGGGAGCTGCTGGACACAATCAGCCGTGGCTaGCCCTCGCCGTCCACAAACTCCAGGTCGGTGTCA +
Preference number: 6 (lower is better)
Translates to: GAWELLDTISRG*PSPSTNSRSVS
Trigger: TGACACCGACCTGGAGTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp TCGTTAGGCTTGCGCACGCGCTGCGGGTCAATGTCTTaGAGCCTGGTGAAGCGCGTGGTGTTGGGATCCCAG +
Preference number: 6 (lower is better)
Translates to: SLGLRTRCGSMS*SLVKRVVLGSQ
Trigger: CTGGGATCCCAACACCACGCGCTTCACCAGGCTGCAAGACATTGACCCGCAGCGCGTGCGCAAGCCTAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp CCTGGATCTCTGAGAAGGCGGCATTCACCAGGGTCCTaGGGGGACACCCGAGTCAGTACTGTGGGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: PGSLRRRHSPGS*GDTRVSTVGSA
Trigger: TGCAGACCCCACAGTACTGACTCGGGTGTCCCCGCAGGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518365.1
ENST00000520124.5
CDS CAA 72 bp GGTCCTGTCTCTGCACGGGCACATGCACTCACTGCCTaGTGGAGGCGCTTCGGCGTTAGGGATCCCTGTGCT +
Preference number: 6 (lower is better)
Translates to: GPVSARAHALTA*WRRFGVRDPCA
Trigger: AGCACAGGGATCCCTAACGCCGAAGCGCCTCCACAAGGCAGTGAGTGCATGTGCCCGTGCAGAGACAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517694.1
CDS TCA 72 bp CCACCACAATGTGTCTATACACCAGCGTCTGTCCCTTaGAGCTGGGGGCCAGGAGTAGCTGGGCGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: PPQCVYTPASVP*SWGPGVAGRPQ
Trigger: CTGGGGACGCCCAGCTACTCCTGGCCCCCAGCTTCAAGGGACAGACGCTGGTGTATAGACACATTGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp CTGGTAGATCTGGGTGAAGGAGAAATCACTGCCCAGTaGCAGGTAGCGGCGGCCACCCACAAGGAAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LVDLGEGEITAQ*QVAAATHKEGL
Trigger: CAGCCCTTCCTTGTGGGTGGCCGCCGCTACCTGGCACTGGGCAGTGATTTCTCCTTCACCCAGATCTACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CCA 72 bp AACTGCAGCAGCGGGAGGTGGGAGAACGCTCCATCCTaGATCTCTGAGAAGGCGGCATTCACCAGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: NCSSGRWENAPS*ISEKAAFTRVR
Trigger: CCTGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306317.7
ENST00000424267.6
CDS CCA 72 bp CCTGTCTCTGCACGGGCACATGCACTCACTGCCTTGTaGAGGCGCTTCGGCGTTAGGGATCCCTGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: PVSARAHALTAL*RRFGVRDPCAS
Trigger: AGAAGCACAGGGATCCCTAACGCCGAAGCGCCTCCACAAGGCAGTGAGTGCATGTGCCCGTGCAGAGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517694.1
CDS CCA 72 bp AACTGCAGCAGCGGGAGGTGGGAGAACGCTCCATCCTaGATCTCTGAGAAGGCGGCATTCACCAGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: NCSSGRWENAPS*ISEKAAFTRVL
Trigger: CAGGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517694.1
ENST00000518365.1
ENST00000520124.5
CDS CAA 72 bp TCACCGTCGATGCGGAAGGCTTCTAGGTCGTTAGGCTaGCGCACGCGCTGCGGGTCAATGTCTTGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: SPSMRKASRSLG*RTRCGSMSCSL
Trigger: CAGGCTGCAAGACATTGACCCGCAGCGCGTGCGCAAGCCTAACGACCTAGAAGCCTTCCGCATCGACGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CAA 90 bp AAGTACCAGTCACCGTCGATGCGGAAGGCTTCTAGGTCGTTAGGCTaGCGCACGCGCTGCGGGTCAATGTCTTGCAGCCTGGTGAAGCGC +
Preference number: 6 (lower is better)
Translates to: KYQSPSMRKASRSLG*RTRCGSMSCSLVKR
Trigger: GCGCTTCACCAGGCTGCAAGACATTGACCCGCAGCGCGTGCGCAAGCCTAACGACCTAGAAGCCTTCCGCATCGACGGTGACTGGTACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS TCA 72 bp TGCGCACGCGCTGCGGGTCAATGTCTTGCAGCCTGGTaGAGCGCGTGGTGTTGGGATCCCAGTGGTAAATGT +
Preference number: 6 (lower is better)
Translates to: CARAAGQCLAAW*SAWCWDPSGKC
Trigger: ACATTTACCACTGGGATCCCAACACCACGCGCTTCACCAGGCTGCAAGACATTGACCCGCAGCGCGTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp CTGCTTCTGGGTGCGACTCCACTGATAGATGACGGGTaGCTGGGAGCTGCTGGACACAATCAGCCGTGGCTT +
Preference number: 6 (lower is better)
Translates to: LLLGATPLIDDG*LGAAGHNQPWL
Trigger: AAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAGTGGAGTCGCACCCAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp CCCAACCCTTCCACAAGGCCCTATCCATACAAGAACTaGAGCAGCGGGAGGTGGGAGAACGCTCCATCCTGG +
Preference number: 6 (lower is better)
Translates to: PNPSTRPYPYKN*SSGRWENAPSW
Trigger: CCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTATGGATAGGGCCTTGTGGAAGGGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CAA 90 bp ATTCACCAGGGTCCTGTCTCTGCACGGGCACATGCACTCACTGCCTaGTGGAGGCGCTTCGGCGTTAGGGATCCCTGTGCTTCTGTCTAC +
Preference number: 6 (lower is better)
Translates to: IHQGPVSARAHALTA*WRRFGVRDPCASVY
Trigger: GTAGACAGAAGCACAGGGATCCCTAACGCCGAAGCGCCTCCACAAGGCAGTGAGTGCATGTGCCCGTGCAGAGACAGGACCCTGGTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517694.1
CDS TCA 72 bp CCACAAACTGCTTCTGGGTGCGACTCCACTGATAGATaGCGGGTGCCTGGGAGCTGCTGGACACAATCAGCC +
Preference number: 6 (lower is better)
Translates to: PQTASGCDSTDR*RVPGSCWTQSA
Trigger: GGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAGTGGAGTCGCACCCAGAAGCAGTTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS CCA 72 bp AGGCCCTATCCATACAAGAACTGCAGCAGCGGGAGGTaGGAGAACGCTCCATCCTGGATCTCTGAGAAGGCG +
Preference number: 6 (lower is better)
Translates to: RPYPYKNCSSGR*ENAPSWISEKA
Trigger: CGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTATGGATAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CCA 72 bp TCACCTGTCTCTAAGATGGCCCCACAGTGCCCACCTTaGGCACTAGCCCAGGCTATCGCACCCAATTCTCTG +
Preference number: 6 (lower is better)
Translates to: SPVSKMAPQCPP*ALAQAIAPNSL
Trigger: CAGAGAATTGGGTGCGATAGCCTGGGCTAGTGCCCAAGGTGGGCACTGTGGGGCCATCTTAGAGACAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CAA 72 bp AGCCTGTTCTGGCCCCAGAAGCTCCCAGGGTCCCTGTaGGATCCTAAACATGGGCCAAGGCAGAGCTCTCTT +
Preference number: 6 (lower is better)
Translates to: SLFWPQKLPGSL*DPKHGPRQSSL
Trigger: AAGAGAGCTCTGCCTTGGCCCATGTTTAGGATCCAACAGGGACCCTGGGAGCTTCTGGGGCCAGAACAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CAA 90 bp TGCCCAGATGTCATTGTTCTCAATGAAGCTGGGGAAAGCGGGAACTaGCCTCAGTGCTCACACAGGATGCCAGACCCCCAGCAGCACTCG +
Preference number: 6 (lower is better)
Translates to: CPDVIVLNEAGESGN*PQCSHRMPDPQQHS
Trigger: CGAGTGCTGCTGGGGGTCTGGCATCCTGTGTGAGCACTGAGGCAAGTTCCCGCTTTCCCCAGCTTCATTGAGAACAATGACATCTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS TCA 72 bp GCTCAACATAGTCCCACTTCAGGATGGTGCAGGCACTaGCTCCTGGCTGGGCCAGAGCCAAATAGAGGTCAC +
Preference number: 6 (lower is better)
Translates to: AQHSPTSGWCRH*LLAGPEPNRGH
Trigger: GTGACCTCTATTTGGCTCTGGCCCAGCCAGGAGTCAGTGCCTGCACCATCCTGAAGTGGGACTATGTTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000520124.5
CDS GCA 72 bp GAGGTCACTGGAGTAGAGGAAGGGCTCAGCCGACACTaGTGGGAAGGCCAGGGTCTGGTACAACACAAAATC +
Preference number: 6 (lower is better)
Translates to: EVTGVEEGLSRH*WEGQGLVQHKI
Trigger: GATTTTGTGTTGTACCAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAGCCCTTCCTCTACTCCAGTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000520124.5
CDS GCA 72 bp ATGTCCAGGGGCCGGAAGATGTCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGCGAGAGATACTGCAGG +
Preference number: 6 (lower is better)
Translates to: MSRGRKMSLGSV*RLLLASERYCR
Trigger: CCTGCAGTATCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCTGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS CAA 72 bp GGCCGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATaGTTGGCCAGCGAGAGATACTGCAGGTGCGACAGT +
Preference number: 6 (lower is better)
Translates to: GRKMSLGSVCRL*LASERYCRCDS
Trigger: ACTGTCGCACCTGCAGTATCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS CCA 72 bp TTGGAGTTGAGTAACAAGAACTGCAGCAGCGGGAGGTaGGAGAACGCTCCATCCTGGATCTCTGAGAAGGCG +
Preference number: 6 (lower is better)
Translates to: LELSNKNCSSGR*ENAPSWISEKA
Trigger: CGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTTACTCAACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000518365.1
CDS CCA 72 bp GTCACTGGAGTAGAGGAAGGGCTCAGCCGACACTGCTaGGAAGGCCAGGGTCTGGTACAACACAAAATCTGT +
Preference number: 6 (lower is better)
Translates to: VTGVEEGLSRHC*EGQGLVQHKIC
Trigger: ACAGATTTTGTGTTGTACCAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAGCCCTTCCTCTACTCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000520124.5
CDS CAA 72 bp CGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTaGGCCAGCGAGAGATACTGCAGGTGCGACAGTCCT +
Preference number: 6 (lower is better)
Translates to: RKMSLGSVCRLL*ASERYCRCDSP
Trigger: AGGACTGTCGCACCTGCAGTATCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS CAA 72 bp TGGACAACTGTCCCTCATGGACGGCATCTTGTAGGGTaGGAGACACTCCTGCCATCCCTTTCTTTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: WTTVPHGRHLVG*ETLLPSLSFSP
Trigger: GGGGCTGAAAGAAAGGGATGGCAGGAGTGTCTCCAACCCTACAAGATGCCGTCCATGAGGGACAGTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CAA 72 bp GTCATTGTTCTCAATGAAGCTGGGGAAAGCGGGAACTaGCCTCAGTGCTCACACAGGATGCCAGACCCCCAG +
Preference number: 6 (lower is better)
Translates to: VIVLNEAGESGN*PQCSHRMPDPQ
Trigger: CTGGGGGTCTGGCATCCTGTGTGAGCACTGAGGCAAGTTCCCGCTTTCCCCAGCTTCATTGAGAACAATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CCA 72 bp AAGGGCTCAGCCGACACTGCTGGGAAGGCCAGGGTCTaGTACAACACAAAATCTGTGGTGATGCAATCGAAC +
Preference number: 6 (lower is better)
Translates to: KGSADTAGKARV*YNTKSVVMQSN
Trigger: GTTCGATTGCATCACCACAGATTTTGTGTTGTACCAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306317.7
ENST00000424267.6
ENST00000517694.1
ENST00000520124.5
CDS GCA 72 bp TGCAGGTTATTGTTGGCCAGCGAGAGATACTGCAGGTaGGACAGTCCTGTGAAGGCGTTGTCTCCAATCAGT +
Preference number: 6 (lower is better)
Translates to: CRLLLASERYCR*DSPVKALSPIS
Trigger: ACTGATTGGAGACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTCGCTGGCCAACAATAACCTGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS GCA 72 bp TGGGTACATCCTATCAGAACAAAAGCAAGGGACACCTaGATCTTCGTCTGCAGAGGCTGCCTCTGTCCACTC +
Preference number: 6 (lower is better)
Translates to: WVHPIRTKARDT*IFVCRGCLCPL
Trigger: GAGTGGACAGAGGCAGCCTCTGCAGACGAAGATGCAGGTGTCCCTTGCTTTTGTTCTGATAGGATGTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CCA 72 bp AGCCCGTGTCCCCGAGACAGGTTTCCAAATGGAGTCTaGCATCACCAAGCCATAGAGATAGAGCATCAGGTA +
Preference number: 6 (lower is better)
Translates to: SPCPRDRFPNGV*HHQAIEIEHQV
Trigger: TACCTGATGCTCTATCTCTATGGCTTGGTGATGCCAGACTCCATTTGGAAACCTGTCTCGGGGACACGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CAA 90 bp GACTTGAGTCCTCGGAAGGTGAACTTGGATAGTGCCCAGATGTCATaGTTCTCAATGAAGCTGGGGAAAGCGGGAACTTGCCTCAGTGCT +
Preference number: 6 (lower is better)
Translates to: DLSPRKVNLDSAQMS*FSMKLGKAGTCLSA
Trigger: AGCACTGAGGCAAGTTCCCGCTTTCCCCAGCTTCATTGAGAACAATGACATCTGGGCACTATCCAAGTTCACCTTCCGAGGACTCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CCA 72 bp AGATTTCAGCCCGTGTCCCCGAGACAGGTTTCCAAATaGAGTCTGGCATCACCAAGCCATAGAGATAGAGCA +
Preference number: 6 (lower is better)
Translates to: RFQPVSPRQVSK*SLASPSHRDRA
Trigger: TGCTCTATCTCTATGGCTTGGTGATGCCAGACTCCATTTGGAAACCTGTCTCGGGGACACGGGCTGAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CAA 72 bp CCTCGGAAGGTGAACTTGGATAGTGCCCAGATGTCATaGTTCTCAATGAAGCTGGGGAAAGCGGGAACTTGC +
Preference number: 6 (lower is better)
Translates to: PRKVNLDSAQMS*FSMKLGKAGTC
Trigger: GCAAGTTCCCGCTTTCCCCAGCTTCATTGAGAACAATGACATCTGGGCACTATCCAAGTTCACCTTCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520124.5
CDS CAA 90 bp TTGGCCAGCGAGAGATACTGCAGGTGCGACAGTCCTGTGAAGGCGTaGTCTCCAATCAGTGTAAACTTGTTGGAGTTGAGTAACAAGAAC +
Preference number: 6 (lower is better)
Translates to: LASERYCRCDSPVKA*SPISVNLLELSNKN
Trigger: GTTCTTGTTACTCAACTCCAACAAGTTTACACTGATTGGAGACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTCGCTGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS CAA 72 bp CCTCGGAAGGTGAACTTGGATAGTGCCCAGATGTCATaGTTCTCAATGAAGAGATACTGCAGGTGCGACAGT +
Preference number: 6 (lower is better)
Translates to: PRKVNLDSAQMS*FSMKRYCRCDS
Trigger: ACTGTCGCACCTGCAGTATCTCTTCATTGAGAACAATGACATCTGGGCACTATCCAAGTTCACCTTCCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000517694.1
ENST00000518365.1
CDS CAA 72 bp GAGAGATACTGCAGGTGCGACAGTCCTGTGAAGGCGTaGTCTCCAATCAGTGTAAACTTGTTGGAGTTGAGT +
Preference number: 6 (lower is better)
Translates to: ERYCRCDSPVKA*SPISVNLLELS
Trigger: ACTCAACTCCAACAAGTTTACACTGATTGGAGACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424267.6
CDS GCA 72 bp CAGATGTCATTGTTCTCAATGAAGAGATACTGCAGGTaGGACAGTCCTGTGAAGGCGTTGTCTCCAATCAGT +
Preference number: 6 (lower is better)
Translates to: QMSLFSMKRYCR*DSPVKALSPIS
Trigger: ACTGATTGGAGACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTTCATTGAGAACAATGACATCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000517694.1
ENST00000518365.1
CDS CAA 72 bp AAGAGATACTGCAGGTGCGACAGTCCTGTGAAGGCGTaGTCTCCAATCAGTGTAAACTTGTTGGAGTTGAGT +
Preference number: 6 (lower is better)
Translates to: KRYCRCDSPVKA*SPISVNLLELS
Trigger: ACTCAACTCCAACAAGTTTACACTGATTGGAGACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000517694.1
ENST00000518365.1
CDS CAA 90 bp TTCTCAATGAAGAGATACTGCAGGTGCGACAGTCCTGTGAAGGCGTaGTCTCCAATCAGTGTAAACTTGTTGGAGTTGAGTAACAAGAAC +
Preference number: 6 (lower is better)
Translates to: FSMKRYCRCDSPVKA*SPISVNLLELSNKN
Trigger: GTTCTTGTTACTCAACTCCAACAAGTTTACACTGATTGGAGACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTTCATTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306317.7
ENST00000517694.1
ENST00000518365.1