RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LGALSL (Homo sapiens)

Ensembl gene IDs: ENSG00000119862

Ensembl transcript IDs: ENST00000238875.10, ENST00000409537.2, ENST00000420552.5, ENST00000462737.1, ENST00000464281.5

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCCCTGCTCCTCTAGTTTCTGCTGAATTATGCAGTGGGTGGGAATaGTTGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTCCACCAT +
Preference number: 1 (lower is better)
Translates to: RPAPLVSAELCSGWE*LATQNSLPMGLFHH
Trigger: ATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGCAGAAACTAGAGGAGCAGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CCA 90 bp CATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCTCCTGTTaGAGTCACCTGTTTGATCAGTTCCGTAAGTGCAGGGTAACACCT +
Preference number: 1 (lower is better)
Translates to: HPLPCGDVYSTATSC*SHLFDQFRKCRVTP
Trigger: AGGTGTTACCCTGCACTTACGGAACTGATCAAACAGGTGACTCCAACAGGAGGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CCA 90 bp AGTACACGCCCTGCTCCTCTAGTTTCTGCTGAATTATGCAGTGGGTaGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTC +
Preference number: 1 (lower is better)
Translates to: STRPAPLVSAELCSG*EWLATQNSLPMGLF
Trigger: GAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGCAGAAACTAGAGGAGCAGGGCGTGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR GCA 90 bp ATTCCAATCAGTACACGCCCTGCTCCTCTAGTTTCTGCTGAATTATaGAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATG +
Preference number: 1 (lower is better)
Translates to: IPISTRPAPLVSAEL*SGWEWLATQNSLPM
Trigger: CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGCAGAAACTAGAGGAGCAGGGCGTGTACTGATTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR GCA 90 bp TGTTCTTCACCCCTCTCCCCAGATATACAAGAATTTCTGAGTAGCTaGCGATCTGTGAACACAGCTTTGAGTTCGATTGCCACATCGGCA +
Preference number: 1 (lower is better)
Translates to: CSSPLSPDIQEFLSS*RSVNTALSSIATSA
Trigger: TGCCGATGTGGCAATCGAACTCAAAGCTGTGTTCACAGATCGGCAGCTACTCAGAAATTCTTGTATATCTGGGGAGAGGGGTGAAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420552.5
3UTR CCA 90 bp TATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATaGGGCTCTTCCACCATAAGTTGGATCAAAACTCCACAAATGTAT +
Preference number: 1 (lower is better)
Translates to: YAVGGNGWPLKTVFL*GSSTISWIKTPQMY
Trigger: ATACATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR TCA 90 bp TTCTTCCAGACCAACAGTCAGATAGTTGTGGCACGTGATCCTATTTaGAATAGAGGTGGTTTAAATCAGCCAAGCTTGGTGATCTGGAGG +
Preference number: 1 (lower is better)
Translates to: FFQTNSQIVVARDPI*NRGGLNQPSLVIWR
Trigger: CCTCCAGATCACCAAGCTTGGCTGATTTAAACCACCTCTATTTCAAATAGGATCACGTGCCACAACTATCTGACTGTTGGTCTGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409537.2
3UTR CCA 90 bp CAGGGTAACACCTACAGCTTAATTGGAAGCATTCACTCTACTGGCTaGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGATAAA +
Preference number: 1 (lower is better)
Translates to: QGNTYSLIGSIHSTG*IQRPGVLGVNLSDK
Trigger: TTTATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAATTAAGCTGTAGGTGTTACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CCA 90 bp GTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTaGGTGCTCACAAAGAATTTCCACCCTGAATGGCTGGTCTGGAAT +
Preference number: 1 (lower is better)
Translates to: VKIKKLVSIHKHSET*VLTKNFHPEWLVWN
Trigger: ATTCCAGACCAGCCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
3UTR GCA 90 bp ATAACACCTTACATACCCGAATACTTTCCTGTGGAAGCTTTACATTaGATTTTCCATCCTGAAATTCTCACCTTAGACCTTACAGGCCCA +
Preference number: 1 (lower is better)
Translates to: ITPYIPEYFPVEALH*IFHPEILTLDLTGP
Trigger: TGGGCCTGTAAGGTCTAAGGTGAGAATTTCAGGATGGAAAATGCAATGTAAAGCTTCCACAGGAAAGTATTCGGGTATGTAAGGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR TCA 90 bp AAATGGACAGATTGTCTAAAGCCTGCTTTCTATTCCCCCAGAGCCTaGTTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTAGG +
Preference number: 1 (lower is better)
Translates to: KWTDCLKPAFYSPRA*LLFILLGFGYCRTR
Trigger: CCTAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAATAGAAAGCAGGCTTTAGACAATCTGTCCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR GCA 90 bp ACTCACTCCAATTTTACTGTAGAAATGGACAGATTGTCTAAAGCCTaGTTTCTATTCCCCCAGAGCCTGATTGTTATTTATACTCCTTGG +
Preference number: 1 (lower is better)
Translates to: THSNFTVEMDRLSKA*FLFPQSLIVIYTPW
Trigger: CCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAATAGAAAGCAGGCTTTAGACAATCTGTCCATTTCTACAGTAAAATTGGAGTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CCA 90 bp TGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTAGGGCTCTaGTCAGAAATAACACCTTACATACCCGAATACTTTCCTGTGGAA +
Preference number: 1 (lower is better)
Translates to: CYLYSLVLVIAELGL*SEITPYIPEYFPVE
Trigger: TTCCACAGGAAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR GCA 90 bp GGTCTCCATTTATCTTTATGGTGTCAATTGCAGATAACGTTTGAATaGGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTC +
Preference number: 1 (lower is better)
Translates to: GLHLSLWCQLQITFE*DGKNQKVGVHPQTL
Trigger: GAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAAACGTTATCTGCAATTGACACCATAAAGATAAATGGAGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
3UTR TCA 90 bp AATATTGGTTGTGCTACACAATTCCACTTTAGTGCAGAAATGCATTaGTTTCACTGTACCGTTGTTGTTGGCTTTTTAAGTGTCTTTAGC +
Preference number: 1 (lower is better)
Translates to: NIGCATQFHFSAEMH*FHCTVVVGFLSVFS
Trigger: GCTAAAGACACTTAAAAAGCCAACAACAACGGTACAGTGAAATCAATGCATTTCTGCACTAAAGTGGAATTGTGTAGCACAACCAATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CAA 90 bp CCTGCTCCTCTAGTTTCTGCTGAATTATGCAGTGGGTGGGAATGGTaGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTCCACCATAAG +
Preference number: 2 (lower is better)
Translates to: PAPLVSAELCSGWEW*ATQNSLPMGLFHHK
Trigger: CTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGCAGAAACTAGAGGAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR TCA 90 bp TCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTGAATGGCATCAGCCAAGCTTGGTaGTCTGGAGGTCTCCATTTA +
Preference number: 2 (lower is better)
Translates to: STNTRKRGCSQRISTLNGISQAW*SGGLHL
Trigger: TAAATGGAGACCTCCAGATCACCAAGCTTGGCTGAT...GCCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462737.1
3UTR-3UTR CCA 90 bp CAGAATAAGCGTGTCAATTCCAATCAGTACACGCCCTGCTCCTCTAGTTTCTGCGTGGGTGGGAATGGTTaGCCACTCAAAACAGTCTTC +
Preference number: 2 (lower is better)
Translates to: QNKRVNSNQYTPCSSSFCVGGNG*PLKTVF
Trigger: GAAGACTGTTTTGAGTGGCCAACCATTCCCACCCAC...GCAGAAACTAGAGGAGCAGGGCGTGTACTGATTGGAATTGACACGCTTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR TCA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCAAGCATCTTCTACTCTaGAGCTTCCAAAGGCATTAC +
Preference number: 2 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATKHLLL*SFQRHY
Trigger: GTAATGCCTTTGGAAGCTTCAGAGTAGAAGATGCTT...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR GCA 90 bp TTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGGGGCTCGCTTCTGCTTTACACTaGATTCCACAGTCATTTTCA +
Preference number: 2 (lower is better)
Translates to: LCSGWEWLATQNSLPMGLASALH*IPQSFS
Trigger: TGAAAATGACTGTGGAATGCAGTGTAAAGCAGAAGC...GAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR GCA 90 bp TGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTCCACCATAAGTTGGATCAAAAAGCATCCCTTGCCTTaGGGTGACGTTTACAGTACT +
Preference number: 2 (lower is better)
Translates to: WPLKTVFLWGSSTISWIKKHPLP*GDVYST
Trigger: AGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTT...TTTGATCCAACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR GCA 90 bp TGCGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGAGCTTTGAGTTCGATTaGCACATCGGCAGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: CDGKNQKVGVHPQTLGNVSFEFD*HIGRRV
Trigger: GACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCT...CACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420552.5
3UTR-3UTR CCA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTATTCACTCTACTGGCTaGATTCAAAGACCTGGAGTC +
Preference number: 2 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVIHSTG*IQRPGV
Trigger: GACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAAT...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp TTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTGAATGGCTGGTCTaGAATGAATGGAAAGTAAGG +
Preference number: 2 (lower is better)
Translates to: LVSIHKHSETWVLTKNFHPEWLV*NEWKVR
Trigger: CCTTACTTTCCATTCATTCCAGACCAGCCATTCAGG...GTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
3UTR-3UTR TCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAAAGCATCTTCTACTCTaGAGCTTCCAAAGGCATTAC +
Preference number: 2 (lower is better)
Translates to: LEAFTLLAGFKDLESWELKHLLL*SFQRHY
Trigger: GTAATGCCTTTGGAAGCTTCAGAGTAGAAGATGCTT...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR TCA 90 bp GGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATATCTTCCCTCACTACCTaGTCAAAGCAATGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: GYCRTRALVRNNTLHTRISSLTT*SKQCQG
Trigger: CCCTTGGCATTGCTTTGATCAGGTAGTGAGGGAAGA...TATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR TCA 90 bp CTTACAGGCCCAGGAGAGGGTGTGAATATTGTTTTCAGTTTACAGCTAAAGCCCCCCCACGGAACAGGCTaGATATGGTTAAATAAGTTG +
Preference number: 2 (lower is better)
Translates to: LTGPGEGVNIVFSLQLKPPHGTG*IWLNKL
Trigger: CAACTTATTTAACCATATTCAGCCTGTTCCGTGGGG...GGGCTTTAGCTGTAAACTGAAAACAATATTCACACCCTCTCCTGGGCCTGTAAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACATGCAGTGGGTGGGAATaGTTGGCCACTCAAAACAGT +
Preference number: 2 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTCSGWE*LATQNS
Trigger: ACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCA...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp TTGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATGCAGTGGGTGGGAATaGTTGGCCACTCAAAACAGT +
Preference number: 2 (lower is better)
Translates to: LVIAELGLWSEITPYIPECSGWE*LATQNS
Trigger: ACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCA...TTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR GCA 90 bp TGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGAAGGGCCGTTTGCTTCTaGTTTACACTGCATTCCACA +
Preference number: 2 (lower is better)
Translates to: WIQRPGVLGVNLSDKLTGRAVCF*FTLHST
Trigger: TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCT...TCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR GCA 90 bp TGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTCCACCATAAGTTGGATCAAAACATGGTCACTTCAGTaGCTCTGCATGTTGTGTAAA +
Preference number: 2 (lower is better)
Translates to: WPLKTVFLWGSSTISWIKTWSLQ*LCMLCK
Trigger: TTTACACAACATGCAGAGGCACTGAAGTGACCATGT...TTTGATCCAACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCGATCATTTCCTAATCTaGATCCTATCTAATCCTACT +
Preference number: 2 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATDHFLI*ILSNPT
Trigger: AGTAGGATTAGATAGGATCCAGATTAGGAAATGATC...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp CTTACAGGCCCAGGAGAGGGTGTGAATATTGTTTTCAGTTTACAGCTAAAGCCCCACCTACAGCTTAATTaGAAGCATTCACTCTACTGG +
Preference number: 2 (lower is better)
Translates to: LTGPGEGVNIVFSLQLKPHLQLN*KHSLYW
Trigger: CCAGTAGAGTGAATGCTTCCAATTAAGCTGTAGGTG...GGGCTTTAGCTGTAAACTGAAAACAATATTCACACCCTCTCCTGGGCCTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp ACATCATTTAGATTAATCCCAATAGGCTTATCCAAGCGGTTCCCACTAACCTCAAGGCTTGAAAATACCTaGAACCACAGAACAGCCCCC +
Preference number: 2 (lower is better)
Translates to: TSFRLIPIGLSKRFPLTSRLENT*NHRTAP
Trigger: GGGGGCTGTTCTGTGGTTCCAGGTATTTTCAAGCCT...TGAGGTTAGTGGGAACCGCTTGGATAAGCCTATTGGGATTAATCTAAATGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp AAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACCCTGAATGGCTGGTCTaGAATGAATGGAAAGTAAGG +
Preference number: 2 (lower is better)
Translates to: KNQKVGVHPQTLGNVGAHPEWLV*NEWKVR
Trigger: CCTTACTTTCCATTCATTCCAGACCAGCCATTCAGG...GTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
3UTR-3UTR TCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTACAAACCACCCTTAAGTaGAACTTGCCATTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: LEAFTLLAGFKDLESWELQTTLK*NLPFVF
Trigger: AAAAACAAATGGCAAGTTTCACTTAAGGGTGGTTTG...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR TCA 90 bp TTGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAACCCCACGGAACAGGCTaGATATGGTTAAATAAGTTG +
Preference number: 2 (lower is better)
Translates to: LVIAELGLWSEITPYIPEPHGTG*IWLNKL
Trigger: CAACTTATTTAACCATATTCAGCCTGTTCCGTGGGG...TTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR TCA 90 bp GGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGATCATTTCCTAATCTGATCAGCCAAGCTTGGTaGTCTGGAGGTCTCCATTTA +
Preference number: 2 (lower is better)
Translates to: GVLGVNLSDKLTGSFPNLISQAW*SGGLHL
Trigger: TAAATGGAGACCTCCAGATCACCAAGCTTGGCTGAT...CAGATTAGGAAATGATCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409537.2
3UTR-3UTR GCA 90 bp CCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTAAGGGCCGTTTGCTTCTaGTTTACACTGCATTCCACA +
Preference number: 2 (lower is better)
Translates to: PPEPDCYLYSLVLVIAELRAVCF*FTLHST
Trigger: TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCT...TAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR GCA 90 bp TTGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAAACTTTAAGCATCCCTTaGCTTGCGGTGACGTTTACA +
Preference number: 2 (lower is better)
Translates to: LVIAELGLWSEITPYIPETLSIP*LAVTFT
Trigger: TGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGT...TTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACAATTCACTCTACTGGCTaGATTCAAAGACCTGGAGTC +
Preference number: 2 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTIHSTG*IQRPGV
Trigger: GACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAAT...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CAA 90 bp AGCCTGCTTTCTATTCCCCCAGAGCCTGATTGTTATTTATACTCCTaGGTTTTGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACA +
Preference number: 2 (lower is better)
Translates to: SLLSIPPEPDCYLYS*VLVIAELGLWSEIT
Trigger: TGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAATAGAAAGCAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR TCA 90 bp TGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTCCACCATAAGTTGGATCAAACAAACCACCCTTAAGTaGAACTTGCCATTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: WPLKTVFLWGSSTISWIKQTTLK*NLPFVF
Trigger: AAAAACAAATGGCAAGTTTCACTTAAGGGTGGTTTG...TTTGATCCAACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR TCA 90 bp TTTGAATGCGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAAAGTAAGGGATTGCTaGCTGTTCTTCACCCCTCTC +
Preference number: 2 (lower is better)
Translates to: FECDGKNQKVGVHPQTLGKVRDC*LFFTPL
Trigger: GAGAGGGGTGAAGAACAGTCAGCAATCCCTTACTTT...TCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000420552.5
3UTR-3UTR GCA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACAACATGGTCACTTCAGTaGCTCTGCATGTTGTGTAAA +
Preference number: 2 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTTWSLQ*LCMLCK
Trigger: TTTACACAACATGCAGAGGCACTGAAGTGACCATGT...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp TTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGGATCATTTCCTAATCTaGATCCTATCTAATCCTACT +
Preference number: 2 (lower is better)
Translates to: FTLLAGFKDLESWELTFQDHFLI*ILSNPT
Trigger: AGTAGGATTAGATAGGATCCAGATTAGGAAATGATC...CTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGAAAGACCTGGAGTCCTaGGAGTTAACCTTTCAGATA +
Preference number: 2 (lower is better)
Translates to: QLTLYFHTKLPKGLAANEKDLES*ELTFQI
Trigger: TATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTT...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CAA 90 bp CTTTCTATTCCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTaGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTAC +
Preference number: 2 (lower is better)
Translates to: LSIPPEPDCYLYSLV*VIAELGLWSEITPY
Trigger: GTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAATAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR TCA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGTTAAGTGACAAGCCATaGGAAGTTAATCACAGGCTT +
Preference number: 2 (lower is better)
Translates to: QLTLYFHTKLPKGLAANELSDKP*EVNHRL
Trigger: AAGCCTGTGATTAACTTCTCATGGCTTGTCACTTAA...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR GCA 90 bp TGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGAGCTTCTGCTTTACACTaGATTCCACAGTCATTTTCA +
Preference number: 2 (lower is better)
Translates to: WIQRPGVLGVNLSDKLTGASALH*IPQSFS
Trigger: TGAAAATGACTGTGGAATGCAGTGTAAAGCAGAAGC...TCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR GCA 90 bp ACATCATTTAGATTAATCCCAATAGGCTTATCCAAGCGGTTCCCACTAACCTCATTATTCAGGGCCGTTTaGTTCTGCTTTACACTGCAT +
Preference number: 2 (lower is better)
Translates to: TSFRLIPIGLSKRFPLTSLFRAV*FCFTLH
Trigger: ATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAA...TGAGGTTAGTGGGAACCGCTTGGATAAGCCTATTGGGATTAATCTAAATGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CCA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTCACCTACAGCTTAATTaGAAGCATTCACTCTACTGG +
Preference number: 2 (lower is better)
Translates to: IAELGLWSEITPYIPEYFHLQLN*KHSLYW
Trigger: CCAGTAGAGTGAATGCTTCCAATTAAGCTGTAGGTG...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CAA 90 bp GTAGATATACACACTCACTCCAATTTTACTGTAGAAATGGACAGATaGTCTAAAGCCTGCTTTCTATTCCCCCAGAGCCTGATTGTTATT +
Preference number: 2 (lower is better)
Translates to: VDIHTHSNFTVEMDR*SKACFLFPQSLIVI
Trigger: AATAACAATCAGGCTCTGGGGGAATAGAAAGCAGGCTTTAGACAATCTGTCCATTTCTACAGTAAAATTGGAGTGAGTGTGTATATCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR GCA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTGTGGAAGCTTTACATTaGATTTTCCATCCTGAAATT +
Preference number: 2 (lower is better)
Translates to: IAELGLWSEITPYIPEYFVEALH*IFHPEI
Trigger: AATTTCAGGATGGAAAATGCAATGTAAAGCTTCCAC...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR GCA 72 bp AAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTaGGGTGACGTTTACAGTACTGCAACCTCCTGTTGG +
Preference number: 3 (lower is better)
Translates to: KSRTQDFKHPLP*GDVYSTATSCW
Trigger: CCAACAGGAGGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CCA 72 bp CCTTGCGGTGACGTTTACAGTACTGCAACCTCCTGTTaGAGTCACCTGTTTGATCAGTTCCGTAAGTGCAGG +
Preference number: 3 (lower is better)
Translates to: PCGDVYSTATSC*SHLFDQFRKCR
Trigger: CCTGCACTTACGGAACTGATCAAACAGGTGACTCCAACAGGAGGTTGCAGTACTGTAAACGTCACCGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR GCA 72 bp AGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTaGTCACAAAGAATTTCCACCCTGAATGGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: SWCPSTNTRKRG*SQRISTLNGWS
Trigger: AGACCAGCCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
3UTR-3UTR CAA 90 bp TGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCTTAAATCAGCCAAGCTaGGTGATCTGGAGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: WCPSTNTRKRGCSQRISTLNQPS*VIWRSP
Trigger: TGGAGACCTCCAGATCACCAAGCTTGGCTGATTTAA...GGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462737.1
3UTR CCA 72 bp GGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATaGGGCTCTTCCACCATAAGTTGGATCAAAACTCCA +
Preference number: 3 (lower is better)
Translates to: GGNGWPLKTVFL*GSSTISWIKTP
Trigger: TGGAGTTTTGATCCAACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CCA 72 bp CCTGCTCCTCTAGTTTCTGCTGAATTATGCAGTGGGTaGGAATGGTTGGCCACTCAAAACAGTCTTCCTATG +
Preference number: 3 (lower is better)
Translates to: PAPLVSAELCSG*EWLATQNSLPM
Trigger: CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGCAGAAACTAGAGGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAAATGGCTCGGTGTCTTaGTCCCAACAGCTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: LEAFTLLAGFKDLESWELNGSVS*SQQLSS
Trigger: AGAAGAAAGCTGTTGGGACAAAGACACCGAGCCATT...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp GCTGAATTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGGTTGGAGTCACCTGTTaGATCAGTTCCGTAAGTGCA +
Preference number: 3 (lower is better)
Translates to: AELCSGWEWLATQNSLPMVGVTC*ISSVSA
Trigger: TGCACTTACGGAACTGATCAAACAGGTGACTCCAAC...CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTGTTGGAGTCACCTGTTaGATCAGTTCCGTAAGTGCA +
Preference number: 3 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVVGVTC*ISSVSA
Trigger: TGCACTTACGGAACTGATCAAACAGGTGACTCCAAC...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp TTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGGGGCTCAATGTACAGCCAGTCTaGTTGGATACAGTGTCTTCT +
Preference number: 3 (lower is better)
Translates to: LCSGWEWLATQNSLPMGLNVQPV*LDTVSS
Trigger: AGAAGACACTGTATCCAACAAGACTGGCTGTACATT...GAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTATTAAGTCTCCAGATCTaGCTAGGACACTTCTTCCAG +
Preference number: 3 (lower is better)
Translates to: LEAFTLLAGFKDLESWELLSLQI*LGHFFQ
Trigger: CTGGAAGAAGTGTCCTAGCAAGATCTGGAGACTTAA...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp CTTACAGGCCCAGGAGAGGGTGTGAATATTGTTTTCAGTTTACAGCTAAAGCCCGTTATTCAGGGCCGTTaGCTTCTGCTTTACACTGCA +
Preference number: 3 (lower is better)
Translates to: LTGPGEGVNIVFSLQLKPVIQGR*LLLYTA
Trigger: TGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAAC...GGGCTTTAGCTGTAAACTGAAAACAATATTCACACCCTCTCCTGGGCCTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CCA 72 bp AAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTaGGTGCTCACAAAGAATTTCCACCCTGAATGGCTG +
Preference number: 3 (lower is better)
Translates to: KKLVSIHKHSET*VLTKNFHPEWL
Trigger: CAGCCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
3UTR-3UTR CAA 90 bp TTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGGGGCTCACACTGTCTACATTCTaGACACTTGAAAATGACATG +
Preference number: 3 (lower is better)
Translates to: LCSGWEWLATQNSLPMGLTLSTF*TLENDM
Trigger: CATGTCATTTTCAAGTGTCAAGAATGTAGACAGTGT...GAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp AAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTATGGAAAGTAAGGGATaGCTGACTGTTCTTCACCCC +
Preference number: 3 (lower is better)
Translates to: KSWCPSTNTRKRGCSQRIMESKG*LTVLHP
Trigger: GGGGTGAAGAACAGTCAGCAATCCCTTACTTTCCAT...AATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420552.5
3UTR TCA 72 bp CCTCAGAGCCAACACAGTAGGAAGCATCTTCTACTCTaGAGCTTCCAAAGGCATTACTTAGGGATATTGGTG +
Preference number: 3 (lower is better)
Translates to: PQSQHSRKHLLL*SFQRHYLGILV
Trigger: CACCAATATCCCTAAGTAATGCCTTTGGAAGCTTCAGAGTAGAAGATGCTTCCTACTGTGTTGGCTCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CCA 72 bp ACCTACAGCTTAATTGGAAGCATTCACTCTACTGGCTaGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTT +
Preference number: 3 (lower is better)
Translates to: TYSLIGSIHSTG*IQRPGVLGVNL
Trigger: AAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAATTAAGCTGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp CCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTAGACTTTAAGCATCCCTaGCCTTGCGGTGACGTTTAC +
Preference number: 3 (lower is better)
Translates to: PPEPDCYLYSLVLVIAELDFKHP*PCGDVY
Trigger: GTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTC...TAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTGACTTTAAGCATCCCTaGCCTTGCGGTGACGTTTAC +
Preference number: 3 (lower is better)
Translates to: IAELGLWSEITPYIPEYFDFKHP*PCGDVY
Trigger: GTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTC...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTAAGCTGCCTAAGGGCTaGGCTGCTAATGAGTTAGCT +
Preference number: 3 (lower is better)
Translates to: IAELGLWSEITPYIPEYFKLPKG*AANELA
Trigger: AGCTAACTCATTAGCAGCCAAGCCCTTAGGCAGCTT...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR TCA 72 bp CTTTCCTGTGGAAGCTTTACATTGCATTTTCCATCCTaGAATTCTCACCTTAGACCTTACAGGCCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: LSCGSFTLHFPS*NSHLRPYRPRR
Trigger: TCTCCTGGGCCTGTAAGGTCTAAGGTGAGAATTTCAGGATGGAAAATGCAATGTAAAGCTTCCACAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp CTTACAGGCCCAGGAGAGGGTGTGAATATTGTTTTCAGTTTACAGCTAAAGCCCAAGTTAATCACAGGCTaGAAAATACCTGGAACCACA +
Preference number: 3 (lower is better)
Translates to: LTGPGEGVNIVFSLQLKPKLITG*KIPGTT
Trigger: TGTGGTTCCAGGTATTTTCAAGCCTGTGATTAACTT...GGGCTTTAGCTGTAAACTGAAAACAATATTCACACCCTCTCCTGGGCCTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR TCA 72 bp ACCAACAGTCAGATAGTTGTGGCACGTGATCCTATTTaGAATAGAGGTGGTTTAAATCAGCCAAGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: TNSQIVVARDPI*NRGGLNQPSLV
Trigger: CACCAAGCTTGGCTGATTTAAACCACCTCTATTTCAAATAGGATCACGTGCCACAACTATCTGACTGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409537.2
3UTR-3UTR CAA 90 bp CTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAAAAGTTATAAATGGCTCGGTGTCTTaGTCCCAACAGCTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: LPKALLRDIGEGHIRKVINGSVS*SQQLSS
Trigger: AGAAGAAAGCTGTTGGGACAAAGACACCGAGCCATT...TATAACTTTTCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp GGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTCTTCCACCATAAGTaGGATCAAAACTCCACAAAT +
Preference number: 3 (lower is better)
Translates to: GYCRTRALVRNNTLHTRILFHHK*DQNSTN
Trigger: ATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAG...TATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp CTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAAAAGTTATATTAAATCAGCCAAGCTaGGTGATCTGGAGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: LPKALLRDIGEGHIRKVILNQPS*VIWRSP
Trigger: TGGAGACCTCCAGATCACCAAGCTTGGCTGATTTAA...TATAACTTTTCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409537.2
3UTR-3UTR CAA 90 bp AGGACAAGGATGTGTCATTACAAGACACAGTATGCTGTACAAACAAAACCTAAATTAAGTCTCCAGATCTaGCTAGGACACTTCTTCCAG +
Preference number: 3 (lower is better)
Translates to: RTRMCHYKTQYAVQTKPKLSLQI*LGHFFQ
Trigger: CTGGAAGAAGTGTCCTAGCAAGATCTGGAGACTTAA...TTTAGGTTTTGTTTGTACAGCATACTGTGTCTTGTAATGACACATCCTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR TCA 72 bp GATTGTCTAAAGCCTGCTTTCTATTCCCCCAGAGCCTaGTTGTTATTTATACTCCTTGGTTTTGGTTATTGC +
Preference number: 3 (lower is better)
Translates to: DCLKPAFYSPRA*LLFILLGFGYC
Trigger: GCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAATAGAAAGCAGGCTTTAGACAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CCA 72 bp TACTCCTTGGTTTTGGTTATTGCAGAACTAGGGCTCTaGTCAGAAATAACACCTTACATACCCGAATACTTT +
Preference number: 3 (lower is better)
Translates to: YSLVLVIAELGL*SEITPYIPEYF
Trigger: AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAAAACCAAGGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR-3UTR CAA 90 bp AGGACAAGGATGTGTCATTACAAGACACAGTATGCTGTACAAACAAAACCTAAAACCCTGACTAAAATATaGGTTGTGCTACACAATTCC +
Preference number: 3 (lower is better)
Translates to: RTRMCHYKTQYAVQTKPKTLTKI*VVLHNS
Trigger: GGAATTGTGTAGCACAACCAATATTTTAGTCAGGGT...TTTAGGTTTTGTTTGTACAGCATACTGTGTCTTGTAATGACACATCCTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR TCA 72 bp TGTGCTACACAATTCCACTTTAGTGCAGAAATGCATTaGTTTCACTGTACCGTTGTTGTTGGCTTTTTAAGT +
Preference number: 3 (lower is better)
Translates to: CATQFHFSAEMH*FHCTVVVGFLS
Trigger: ACTTAAAAAGCCAACAACAACGGTACAGTGAAATCAATGCATTTCTGCACTAAAGTGGAATTGTGTAGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAGCTGCTTGCTGCCGCTaGCGCTGCCGCTGCCCGACC +
Preference number: 4 (lower is better)
Translates to: LEAFTLLAGFKDLESWELAACCR*RCRCPT
Trigger: GGTCGGGCAGCGGCAGCGGCAGCGGCAGCAAGCAGC...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR TCA 90 bp ACAGCTTTGAGTTCGATTGCCACATCGGCAGGAGGGTCTTCTGAGTCCCCACAGATCGCTGTCGGCCACTaGTCCCGCCATCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: TALSSIATSAGGSSESPQIAVGH*SRHLLA
Trigger: GGCAAGAAGATGGCGGGATCAGTGGCCGACAGCGAT...CTGTGGGGACTCAGAAGACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR GCA 90 bp GCTGAATTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGGAGGGCGAAGGTGCTTaGCGCGGCCCAGAACGGCCC +
Preference number: 4 (lower is better)
Translates to: AELCSGWEWLATQNSLPMEGEGA*RGPERP
Trigger: GGGCCGTTCTGGGCCGCGGCAAGCACCTTCGCCCTC...CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR GCA 90 bp ATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTGAATGGATCCCGCCATCTTCTTaGCCGGCGCGGCGGGGTACG +
Preference number: 4 (lower is better)
Translates to: IHKHSETWVLTKNFHPEWIPPSS*PARRGT
Trigger: CGTACCCCGCCGCGCCGGGCAAGAAGATGGCGGGAT...CCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462737.1
CDS-3UTR GCA 90 bp TGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGAAAGTGGCGAGGGCCGTaGCGCGTCGGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WIQRPGVLGVNLSDKLTGKWRGP*RVGPGQ
Trigger: CTGCCCAGGGCCGACGCGGCACGGCCCTCGCCACTT...TCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR GCA 90 bp TGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTCCACCATAAGTTGGATCAAACTGGGAGGGCGAAGGTaGTTGCCGCGGCCCAGAACG +
Preference number: 4 (lower is better)
Translates to: WPLKTVFLWGSSTISWIKLGGRR*LPRPRT
Trigger: CGTTCTGGGCCGCGGCAAGCACCTTCGCCCTCCCAG...TTTGATCCAACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR TCA 90 bp ACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTGAATGGCTGGATCGCTGTCGGCCACTaGTCCCGCCATCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: TNTRKRGCSQRISTLNGWIAVGH*SRHLLA
Trigger: GGCAAGAAGATGGCGGGATCAGTGGCCGACAGCGAT...CCAGCCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR TCA 90 bp GTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCAGGCAGGAGGGTCTTCTaGGTCCCCACAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: VGVHPQTLGNVGAHKEFPGRRVF*VPTGQA
Trigger: AGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCC...TGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR GCA 90 bp TGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGAATCCCGCCATCTTCTTaGCCGGCGCGGCGGGGTACG +
Preference number: 4 (lower is better)
Translates to: WIQRPGVLGVNLSDKLTGIPPSS*PARRGT
Trigger: CGTACCCCGCCGCGCCGGGCAAGAAGATGGCGGGAT...TCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR CCA 90 bp CTTACAGGCCCAGGAGAGGGTGTGAATATTGTTTTCAGTTTACAGCTAAAGCCCGTGCCGCGTCGGCCCTaGGCAGCATTTAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LTGPGEGVNIVFSLQLKPVPRRP*AAFKGL
Trigger: GAGGCCTTTAAATGCTGCCCAGGGCCGACGCGGCAC...GGGCTTTAGCTGTAAACTGAAAACAATATTCACACCCTCTCCTGGGCCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR CCA 90 bp GGGCTCTTCCACCATAAGTTGGATCAAAACTCCACAAATGTATTTCAAGGTGCCCCCGACCAAGAAAAGTaGCGAGGGCCGTGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: GLFHHKLDQNSTNVFQGAPDQEK*RGPCRV
Trigger: GACGCGGCACGGCCCTCGCCACTTTTCTTGGTCGGG...GGCACCTTGAAATACATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR TCA 90 bp TGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCTCCCACTCTCTGGGTTaGGGTCTACGATGCCCATCA +
Preference number: 4 (lower is better)
Translates to: WCPSTNTRKRGCSQRISTSHSLG*GLRCPS
Trigger: TGATGGGCATCGTAGACCTCAACCCAGAGAGTGGGA...GGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR TCA 90 bp AATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGGCAGGAGGGTCTTCTaGGTCCCCACAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: NQKVGVHPQTLGNVGAHKGRRVF*VPTGQA
Trigger: AGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCC...TTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR TCA 90 bp CCGATCTGTGAACACAGCTTTGAGTTCGATTGCCACATCGGCAGGAGGGTCTTCAAAGTAAGGGATTGCTaGCTGTTCTTCACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: PICEHSFEFDCHIGRRVFKVRDC*LFFTPL
Trigger: GAGAGGGGTGAAGAACAGTCAGCAATCCCTTACTTT...GAAGACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCTGTGTTCACAGATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR TCA 90 bp ACTCTGAAGCTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAATCGCTGTCGGCCACTaGTCCCGCCATCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: TLKLPKALLRDIGEGHIRIAVGH*SRHLLA
Trigger: GGCAAGAAGATGGCGGGATCAGTGGCCGACAGCGAT...TCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAGCTTCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR TCA 90 bp CTTACAGGCCCAGGAGAGGGTGTGAATATTGTTTTCAGTTTACAGCTAAAGCCCCCCCACAGGTCAAGCTaGTTGCAAAGCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LTGPGEGVNIVFSLQLKPPHRSS*LQSSLG
Trigger: ACCCAGAGAGCTTTGCAATCAGCTTGACCTGTGGGG...GGGCTTTAGCTGTAAACTGAAAACAATATTCACACCCTCTCCTGGGCCTGTAAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR TCA 90 bp TGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTCCACCATAAGTTGGATCAAATCCACCTCTCTGGGTTaGGGTCTACGATGCCCATCA +
Preference number: 4 (lower is better)
Translates to: WPLKTVFLWGSSTISWIKSTSLG*GLRCPS
Trigger: TGATGGGCATCGTAGACCTCAACCCAGAGAGGTGGA...TTTGATCCAACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409537.2
CDS-3UTR TCA 90 bp AAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTCCCCACAGGTCAAGCTaGTTGCAAAGCACCACGGCA +
Preference number: 4 (lower is better)
Translates to: KSWCPSTNTRKRGCSQRIPHRSS*LQSTTA
Trigger: TGCCGTGGTGCTTTGCAATCAGCTTGACCTGTGGGG...AATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462737.1
CDS-3UTR GCA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCAGGGCCGTTTGCTTCTaGTTTACACTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATRAVCF*FTLHST
Trigger: TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCT...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp GTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTAATCATCCCACTCTCTaGGTTGAGGTCTACGATGCC +
Preference number: 4 (lower is better)
Translates to: VSIHKHSETWVLTKNFHPNHPTL*VEVYDA
Trigger: GGCATCGTAGACCTCAACCCAGAGAGTGGGATGATT...AGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR TCA 90 bp TTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGAAGTACACGTCCGCTTaGACTGGAGAGCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: FTLLAGFKDLESWELTFQKYTSA*TGELKE
Trigger: CTCTTTGAGCTCTCCAGTTCAAGCGGACGTGTACTT...CTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAAAGTACACGTCCGCTTaGACTGGAGAGCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LEAFTLLAGFKDLESWELKYTSA*TGELKE
Trigger: CTCTTTGAGCTCTCCAGTTCAAGCGGACGTGTACTT...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTGGCAGGAGGGTCTTCTaGGTCCCCACAGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: IAELGLWSEITPYIPEYFGRRVF*VPTGQA
Trigger: AGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCC...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR TCA 90 bp ATCTTGCTAGGACACTTCTTCCAGACCAACAGTCAGATAGTTGTGGCACGTGATTCCCTTGCCTTGCGGTaGCGTTTACAGTACTGCAAC +
Preference number: 4 (lower is better)
Translates to: ILLGHFFQTNSQIVVARDSLALR*RLQYCN
Trigger: GTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGA...ATCACGTGCCACAACTATCTGACTGTTGGTCTGGAAGAAGTGTCCTAGCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp TTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGTCTTCCCTCACTACCTaGTCAAAGCAATGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FTLLAGFKDLESWELTFQSSLTT*SKQCQG
Trigger: CCCTTGGCATTGCTTTGATCAGGTAGTGAGGGAAGA...CTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCCCCCACGGAACAGGCTaGATATGGTTAAATAAGTTG +
Preference number: 4 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATPHGTG*IWLNKL
Trigger: CAACTTATTTAACCATATTCAGCCTGTTCCGTGGGG...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp AGGACAAGGATGTGTCATTACAAGACACAGTATGCTGTACAAACAAAACCTAAATGCTGCCGCTGCCGCTaGCGCTGCCCGACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RTRMCHYKTQYAVQTKPKCCRCR*RCPTKK
Trigger: TTTCTTGGTCGGGCAGCGGCAGCGGCAGCGGCAGCA...TTTAGGTTTTGTTTGTACAGCATACTGTGTCTTGTAATGACACATCCTTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR GCA 90 bp CAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAAAGCTTTGAGTTCGATTaGCACATCGGCAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QKVGVHPQTLGNVGAHKESFEFD*HIGRRV
Trigger: GACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCT...TTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CCA 90 bp CACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTGAATGGCTGCACGTCCGCTTGAACTaGAGAGCTCAAAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: HKHSETWVLTKNFHPEWLHVRLN*RAQRVV
Trigger: AACAACTCTTTGAGCTCTCCAGTTCAAGCGGACGTG...CAGCCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR CCA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTGGAACTATCAGTCGTaGGAAGTACACGTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVWNYQS*EVHVRL
Trigger: CAAGCGGACGTGTACTTCCCACGACTGATAGTTCCA...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp GCTGAATTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGTGGAACTATCAGTCGTaGGAAGTACACGTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: AELCSGWEWLATQNSLPMWNYQS*EVHVRL
Trigger: CAAGCGGACGTGTACTTCCCACGACTGATAGTTCCA...CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTAGGCTTGAAAATACCTaGAACCACAGAACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVRLENT*NHRTAP
Trigger: GGGGGCTGTTCTGTGGTTCCAGGTATTTTCAAGCCT...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CAA 72 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTaGCCTTGCGGTGACGTTTACAGTACTGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: LLKSRTQDFKHP*PCGDVYSTATS
Trigger: GGAGGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAATCAGCCAAGCTTGGTaGTCTGGAGGTCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: LEAFTLLAGFKDLESWELISQAW*SGGLHL
Trigger: TAAATGGAGACCTCCAGATCACCAAGCTTGGCTGAT...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp TTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGTCCTCTAGTTTCTGCTaGATTATGCAGTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: FTLLAGFKDLESWELTFQSSSFC*IMQWVG
Trigger: TCCCACCCACTGCATAATTCAGCAGAAACTAGAGGA...CTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp CTTCCAAGTAAGTTATTCAGGGCCGTTTGCTTCTGCTTTACACTGCATTCCACAAGCTTTGAGTTCGATTaGCACATCGGCAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LPSKLFRAVCFCFTLHSTSFEFD*HIGRRV
Trigger: GACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCT...TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAACTTACTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR GCA 90 bp AATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAAGCTTTGAGTTCGATTaGCACATCGGCAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: NQKVGVHPQTLGNVGAHKSFEFD*HIGRRV
Trigger: GACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCT...TTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR GCA 90 bp GTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCAACTCGGAAACGTGGGTaGTCACAAAGAATTTCCACC +
Preference number: 4 (lower is better)
Translates to: VGVHPQTLGNVGAHKEFPTRKRG*SQRIST
Trigger: GGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGT...TGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR GCA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCTTATTCAGGGCCGTTTaGTTCTGCTTTACACTGCAT +
Preference number: 4 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATLFRAV*FCFTLH
Trigger: ATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAA...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAAAGCATCCCTTGCCTTaGGGTGACGTTTACAGTACT +
Preference number: 4 (lower is better)
Translates to: LEAFTLLAGFKDLESWELKHPLP*GDVYST
Trigger: AGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTT...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCAAACACTCGGAAACGTaGGTGCTCACAAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATKHSET*VLTKNF
Trigger: GAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTT...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp GGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCAAACACTCGGAAACGTaGGTGCTCACAAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: GVHPQTLGNVGAHKEFPPKHSET*VLTKNF
Trigger: GAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTT...GGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CCA 90 bp ATCTTGCTAGGACACTTCTTCCAGACCAACAGTCAGATAGTTGTGGCACGTGATGTGGGTGGGAATGGTTaGCCACTCAAAACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ILLGHFFQTNSQIVVARDVGGNG*PLKTVF
Trigger: GAAGACTGTTTTGAGTGGCCAACCATTCCCACCCAC...ATCACGTGCCACAACTATCTGACTGTTGGTCTGGAAGAAGTGTCCTAGCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp TGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTCCACCATAAGTTGGATCAAATGCAGTGGGTGGGAATaGTTGGCCACTCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: WPLKTVFLWGSSTISWIKCSGWE*LATQNS
Trigger: ACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCA...TTTGATCCAACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAGAATTATGCAGTGGGTaGGAATGGTTGGCCACTCAA +
Preference number: 4 (lower is better)
Translates to: LEAFTLLAGFKDLESWELELCSG*EWLATQ
Trigger: TTGAGTGGCCAACCATTCCCACCCACTGCATAATTC...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp GGGCTCTTCCACCATAAGTTGGATCAAAACTCCACAAATGTATTTCAAGGTGCCTCTCTCAGGGGGCTTTaGACTAAGGTCGGCAAGATT +
Preference number: 4 (lower is better)
Translates to: GLFHHKLDQNSTNVFQGASLRGL*TKVGKI
Trigger: AATCTTGCCGACCTTAGTTCAAAGCCCCCTGAGAGA...GGCACCTTGAAATACATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ATCTTGCTAGGACACTTCTTCCAGACCAACAGTCAGATAGTTGTGGCACGTGATGATCAGTTCCGTAAGTaGAGGGTAACACCTACAGCT +
Preference number: 4 (lower is better)
Translates to: ILLGHFFQTNSQIVVARDDQFRK*RVTPTA
Trigger: AGCTGTAGGTGTTACCCTGCACTTACGGAACTGATC...ATCACGTGCCACAACTATCTGACTGTTGGTCTGGAAGAAGTGTCCTAGCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTACTTTAAGCATCCCTTaGCTTGCGGTGACGTTTACA +
Preference number: 4 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVTLSIP*LAVTFT
Trigger: TGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGT...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp TTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGATTTTCACACTAAGCTaGCTAAGGGCTTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: FTLLAGFKDLESWELTFQIFTLS*LRAWLL
Trigger: TAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAAT...CTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTCTTGGTTTTGGTTATTaGAGAACTAGGGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVLGFGY*RTRALV
Trigger: GACCAGAGCCCTAGTTCTGCAATAACCAAAACCAAG...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAAGATTGTCTAAAGCCTaGTTTCTATTCCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LEAFTLLAGFKDLESWELRLSKA*FLFPQS
Trigger: GCTCTGGGGGAATAGAAAGCAGGCTTTAGACAATCT...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp AAATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAATGGAACTATCAGTCGTaGGAAGTACACGTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: KSKSWCPSTNTRKRGCSQWNYQS*EVHVRL
Trigger: CAAGCGGACGTGTACTTCCCACGACTGATAGTTCCA...TTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR CCA 90 bp GCTGAATTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGAAGCATTCACTCTACTaGCTGGATTCAAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: AELCSGWEWLATQNSLPMKHSLY*LDSKTW
Trigger: CCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTT...CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTCAAAGCTCTCTGGGTTaGGGTCTACGATGCCCATCA +
Preference number: 4 (lower is better)
Translates to: IAELGLWSEITPYIPEYFQSSLG*GLRCPS
Trigger: TGATGGGCATCGTAGACCTCAACCCAGAGAGCTTTG...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR TCA 90 bp AAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTAAAGTAAGGGATTGCTaGCTGTTCTTCACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: KSWCPSTNTRKRGCSQRIKVRDC*LFFTPL
Trigger: GAGAGGGGTGAAGAACAGTCAGCAATCCCTTACTTT...AATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR TCA 90 bp GCTGAATTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGAAGCATCTTCTACTCTaGAGCTTCCAAAGGCATTAC +
Preference number: 4 (lower is better)
Translates to: AELCSGWEWLATQNSLPMKHLLL*SFQRHY
Trigger: GTAATGCCTTTGGAAGCTTCAGAGTAGAAGATGCTT...CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp ACTCTGAAGCTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGATCTTCCCTCACTACCTaGTCAAAGCAATGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TLKLPKALLRDIGEGHIRSSLTT*SKQCQG
Trigger: CCCTTGGCATTGCTTTGATCAGGTAGTGAGGGAAGA...TCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAGCTTCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp ACTCTGAAGCTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGATCTCTCAGGGGGCTTTaGACTAAGGTCGGCAAGATT +
Preference number: 4 (lower is better)
Translates to: TLKLPKALLRDIGEGHIRSLRGL*TKVGKI
Trigger: AATCTTGCCGACCTTAGTTCAAAGCCCCCTGAGAGA...TCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAGCTTCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp GGGCTCTTCCACCATAAGTTGGATCAAAACTCCACAAATGTATTTCAAGGTGCCTCACTAACACCTTCTTaGCTGGTCTCATGCCACCTT +
Preference number: 4 (lower is better)
Translates to: GLFHHKLDQNSTNVFQGASLTPS*LVSCHL
Trigger: AAGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGA...GGCACCTTGAAATACATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp AAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATACTCGGAAACGTGGGTaGTCACAAAGAATTTCCACC +
Preference number: 4 (lower is better)
Translates to: KKLVSIHKHSETWVLTKNTRKRG*SQRIST
Trigger: GGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGT...ATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR GCA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTTATTCAGGGCCGTTTaGTTCTGCTTTACACTGCAT +
Preference number: 4 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVLFRAV*FCFTLH
Trigger: ATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAA...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAACATGGTCACTTCAGTaGCTCTGCATGTTGTGTAAA +
Preference number: 4 (lower is better)
Translates to: LEAFTLLAGFKDLESWELTWSLQ*LCMLCK
Trigger: TTTACACAACATGCAGAGGCACTGAAGTGACCATGT...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp GGGCTCTTCCACCATAAGTTGGATCAAAACTCCACAAATGTATTTCAAGGTGCCCACGTCCGCTTGAACTaGAGAGCTCAAAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GLFHHKLDQNSTNVFQGAHVRLN*RAQRVV
Trigger: AACAACTCTTTGAGCTCTCCAGTTCAAGCGGACGTG...GGCACCTTGAAATACATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGGATTGCAAAGCTCTCTaGGTTGAGGTCTACGATGCC +
Preference number: 4 (lower is better)
Translates to: QLTLYFHTKLPKGLAANEDCKAL*VEVYDA
Trigger: GGCATCGTAGACCTCAACCCAGAGAGCTTTGCAATC...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR CCA 90 bp TCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGACCTGAATGGCTGGTCTaGAATGAATGGAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SKSWCPSTNTRKRGCSQRPEWLV*NEWKVR
Trigger: CCTTACTTTCCATTCATTCCAGACCAGCCATTCAGG...TCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CCA 90 bp GCTGAATTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGAAAGACCTGGAGTCCTaGGAGTTAACCTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: AELCSGWEWLATQNSLPMKDLES*ELTFQI
Trigger: TATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTT...CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CTTACAGGCCCAGGAGAGGGTGTGAATATTGTTTTCAGTTTACAGCTAAAGCCCATTCACTCTACTGGCTaGATTCAAAGACCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LTGPGEGVNIVFSLQLKPIHSTG*IQRPGV
Trigger: GACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAAT...GGGCTTTAGCTGTAAACTGAAAACAATATTCACACCCTCTCCTGGGCCTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp TGGCCACTCAAAACAGTCTTCCTATGGGGCTCTTCCACCATAAGTTGGATCAAAAAGCATTCACTCTACTaGCTGGATTCAAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: WPLKTVFLWGSSTISWIKKHSLY*LDSKTW
Trigger: CCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTT...TTTGATCCAACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTTGAGTGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACAAGGCTTGAAAATACCTaGAACCACAGAACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTRLENT*NHRTAP
Trigger: GGGGGCTGTTCTGTGGTTCCAGGTATTTTCAAGCCT...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CTTCCAAGTAAGTTATTCAGGGCCGTTTGCTTCTGCTTTACACTGCATTCCACAGAATTATGCAGTGGGTaGGAATGGTTGGCCACTCAA +
Preference number: 4 (lower is better)
Translates to: LPSKLFRAVCFCFTLHSTELCSG*EWLATQ
Trigger: TTGAGTGGCCAACCATTCCCACCCACTGCATAATTC...TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAACTTACTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp GGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATAGAATTTCCACCTCTCTaGGTTGAGGTCTACGATGCC +
Preference number: 4 (lower is better)
Translates to: GYCRTRALVRNNTLHTRIEFPPL*VEVYDA
Trigger: GGCATCGTAGACCTCAACCCAGAGAGGTGGAAATTC...TATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409537.2
CDS-3UTR TCA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGATCAGCCAAGCTTGGTaGTCTGGAGGTCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: QLTLYFHTKLPKGLAANEISQAW*SGGLHL
Trigger: TAAATGGAGACCTCCAGATCACCAAGCTTGGCTGAT...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp CAGAATAAGCGTGTCAATTCCAATCAGTACACGCCCTGCTCCTCTAGTTTCTGCTATTCCCCCAGAGCCTaGTTGTTATTTATACTCCTT +
Preference number: 4 (lower is better)
Translates to: QNKRVNSNQYTPCSSSFCYSPRA*LLFILL
Trigger: AAGGAGTATAAATAACAATCAGGCTCTGGGGGAATA...GCAGAAACTAGAGGAGCAGGGCGTGTACTGATTGGAATTGACACGCTTATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp TTGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATCACTAACACCTTCTTaGCTGGTCTCATGCCACCTT +
Preference number: 4 (lower is better)
Translates to: LVIAELGLWSEITPYIPESLTPS*LVSCHL
Trigger: AAGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGA...TTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ACTCTGAAGCTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAACTCGGAAACGTGGGTaGTCACAAAGAATTTCCACC +
Preference number: 4 (lower is better)
Translates to: TLKLPKALLRDIGEGHIRTRKRG*SQRIST
Trigger: GGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGT...TCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAGCTTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACAAGGGCCGTTTGCTTCTaGTTTACACTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTRAVCF*FTLHST
Trigger: TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCT...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp TTGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAACACGTCCGCTTGAACTaGAGAGCTCAAAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LVIAELGLWSEITPYIPEHVRLN*RAQRVV
Trigger: AACAACTCTTTGAGCTCTCCAGTTCAAGCGGACGTG...TTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp TTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGGGGCTCCTCCATTTATCTTTATaGTGTCAATTGCAGATAACG +
Preference number: 4 (lower is better)
Translates to: LCSGWEWLATQNSLPMGLLHLSL*CQLQIT
Trigger: CGTTATCTGCAATTGACACCATAAAGATAAATGGAG...GAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp TTGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAAACTGCAACCTCCTGTTaGAGTCACCTGTTTGATCAG +
Preference number: 4 (lower is better)
Translates to: LVIAELGLWSEITPYIPETATSC*SHLFDQ
Trigger: CTGATCAAACAGGTGACTCCAACAGGAGGTTGCAGT...TTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp ACTCTGAAGCTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAACTGCAACCTCCTGTTaGAGTCACCTGTTTGATCAG +
Preference number: 4 (lower is better)
Translates to: TLKLPKALLRDIGEGHIRTATSC*SHLFDQ
Trigger: CTGATCAAACAGGTGACTCCAACAGGAGGTTGCAGT...TCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAGCTTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp ACATCATTTAGATTAATCCCAATAGGCTTATCCAAGCGGTTCCCACTAACCTCAGTGGGTGGGAATGGTTaGCCACTCAAAACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TSFRLIPIGLSKRFPLTSVGGNG*PLKTVF
Trigger: GAAGACTGTTTTGAGTGGCCAACCATTCCCACCCAC...TGAGGTTAGTGGGAACCGCTTGGATAAGCCTATTGGGATTAATCTAAATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTTGCAGTGGGTGGGAATaGTTGGCCACTCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: IAELGLWSEITPYIPEYFCSGWE*LATQNS
Trigger: ACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCA...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CAA 72 bp CACACTCACTCCAATTTTACTGTAGAAATGGACAGATaGTCTAAAGCCTGCTTTCTATTCCCCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HTHSNFTVEMDR*SKACFLFPQSL
Trigger: CAGGCTCTGGGGGAATAGAAAGCAGGCTTTAGACAATCTGTCCATTTCTACAGTAAAATTGGAGTGAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp TTCCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACAAAGTAAGGGATTGCTaGCTGTTCTTCACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: FPQSLIVIYTPWFWLLQNKVRDC*LFFTPL
Trigger: GAGAGGGGTGAAGAACAGTCAGCAATCCCTTACTTT...GTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR TCA 90 bp AAATCAGCCAAGCTTGGTGATCTGGAGGTCTCCATTTATCTTTATGGTGTCAATATCAGCCAAGCTTGGTaGTCTGGAGGTCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: KSAKLGDLEVSIYLYGVNISQAW*SGGLHL
Trigger: TAAATGGAGACCTCCAGATCACCAAGCTTGGCTGAT...ATTGACACCATAAAGATAAATGGAGACCTCCAGATCACCAAGCTTGGCTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462737.1
CDS-3UTR TCA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTCAAACCACCCTTAAGTaGAACTTGCCATTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVQTTLK*NLPFVF
Trigger: AAAAACAAATGGCAAGTTTCACTTAAGGGTGGTTTG...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp TTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGCAAACCACCCTTAAGTaGAACTTGCCATTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: FTLLAGFKDLESWELTFQQTTLK*NLPFVF
Trigger: AAAAACAAATGGCAAGTTTCACTTAAGGGTGGTTTG...CTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACACCCCACGGAACAGGCTaGATATGGTTAAATAAGTTG +
Preference number: 4 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTPHGTG*IWLNKL
Trigger: CAACTTATTTAACCATATTCAGCCTGTTCCGTGGGG...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp ATCTTGCTAGGACACTTCTTCCAGACCAACAGTCAGATAGTTGTGGCACGTGATTTGCATTTTCCATCCTaGAATTCTCACCTTAGACCT +
Preference number: 4 (lower is better)
Translates to: ILLGHFFQTNSQIVVARDLHFPS*NSHLRP
Trigger: AGGTCTAAGGTGAGAATTTCAGGATGGAAAATGCAA...ATCACGTGCCACAACTATCTGACTGTTGGTCTGGAAGAAGTGTCCTAGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ACATCATTTAGATTAATCCCAATAGGCTTATCCAAGCGGTTCCCACTAACCTCAACAGGTCAAGCTGATTaGAAAGCTCTCTGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TSFRLIPIGLSKRFPLTSTGQAD*KALWVE
Trigger: CTCAACCCAGAGAGCTTTGCAATCAGCTTGACCTGT...TGAGGTTAGTGGGAACCGCTTGGATAAGCCTATTGGGATTAATCTAAATGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR GCA 90 bp TTCCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACACTCGGAAACGTGGGTaGTCACAAAGAATTTCCACC +
Preference number: 4 (lower is better)
Translates to: FPQSLIVIYTPWFWLLQNTRKRG*SQRIST
Trigger: GGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGT...GTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp CTTACAGGCCCAGGAGAGGGTGTGAATATTGTTTTCAGTTTACAGCTAAAGCCCGCTTCTGCTTTACACTaGATTCCACAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: LTGPGEGVNIVFSLQLKPASALH*IPQSFS
Trigger: TGAAAATGACTGTGGAATGCAGTGTAAAGCAGAAGC...GGGCTTTAGCTGTAAACTGAAAACAATATTCACACCCTCTCCTGGGCCTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ATCTTGCTAGGACACTTCTTCCAGACCAACAGTCAGATAGTTGTGGCACGTGATGCTTCTGCTTTACACTaGATTCCACAGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: ILLGHFFQTNSQIVVARDASALH*IPQSFS
Trigger: TGAAAATGACTGTGGAATGCAGTGTAAAGCAGAAGC...ATCACGTGCCACAACTATCTGACTGTTGGTCTGGAAGAAGTGTCCTAGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp TTCCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACGATCAGTTCCGTAAGTaGAGGGTAACACCTACAGCT +
Preference number: 4 (lower is better)
Translates to: FPQSLIVIYTPWFWLLQNDQFRK*RVTPTA
Trigger: AGCTGTAGGTGTTACCCTGCACTTACGGAACTGATC...GTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACAACTTTAAGCATCCCTTaGCTTGCGGTGACGTTTACA +
Preference number: 4 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTTLSIP*LAVTFT
Trigger: TGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGT...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp AAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTGAATGGCTGGTCAAAGAGTTGTTTAAATaGCCATCATCTAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: KHSETWVLTKNFHPEWLVKELFK*PSSSFT
Trigger: GGTGAAACTAGATGATGGCCATTTAAACAACTCTTT...GACCAGCCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR CCA 90 bp AAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAATGTGCCCACAAAATaGAACTATCAGTCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KNQKVGVHPQTLGNVGAHNVPTK*NYQSWE
Trigger: TTCCCACGACTGATAGTTCCATTTTGTGGGCACATT...GTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR CCA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACACCTGAATGGCTGGTCTaGAATGAATGGAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTPEWLV*NEWKVR
Trigger: CCTTACTTTCCATTCATTCCAGACCAGCCATTCAGG...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR CCA 90 bp CTTCCAAGTAAGTTATTCAGGGCCGTTTGCTTCTGCTTTACACTGCATTCCACACCAAGCTTGGTGATCTaGAGGTCTCCATTTATCTTT +
Preference number: 4 (lower is better)
Translates to: LPSKLFRAVCFCFTLHSTPSLVI*RSPFIF
Trigger: AAAGATAAATGGAGACCTCCAGATCACCAAGCTTGG...TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAACTTACTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CAA 72 bp CCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTaGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATA +
Preference number: 4 (lower is better)
Translates to: PPEPDCYLYSLV*VIAELGLWSEI
Trigger: TATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
3UTR CAA 72 bp TCTATTCCCCCAGAGCCTGATTGTTATTTATACTCCTaGGTTTTGGTTATTGCAGAACTAGGGCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SIPPEPDCYLYS*VLVIAELGLWS
Trigger: TGACCAGAGCCCTAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp AGAGAAATAATTAGTCTTAAGGAAGCCAATAATGTGCTAATTCCCAGTAAGGAGTCCCTTGCCTTGCGGTaGCGTTTACAGTACTGCAAC +
Preference number: 4 (lower is better)
Translates to: REIISLKEANNVLIPSKESLALR*RLQYCN
Trigger: GTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGA...CTCCTTACTGGGAATTAGCACATTATTGGCTTCCTTAAGACTAATTATTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp ACATCATTTAGATTAATCCCAATAGGCTTATCCAAGCGGTTCCCACTAACCTCAGCCCAGGAGAGGGTGTaGATATTGTTTTCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: TSFRLIPIGLSKRFPLTSAQERV*ILFSVY
Trigger: GTAAACTGAAAACAATATTCACACCCTCTCCTGGGC...TGAGGTTAGTGGGAACCGCTTGGATAAGCCTATTGGGATTAATCTAAATGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ACGTTTGAATGCGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCTCACTAACACCTTCTTaGCTGGTCTCATGCCACCTT +
Preference number: 4 (lower is better)
Translates to: TFECDGKNQKVGVHPQTLSLTPS*LVSCHL
Trigger: AAGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGA...GAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAAACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR GCA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGACATGGTCACTTCAGTaGCTCTGCATGTTGTGTAAA +
Preference number: 4 (lower is better)
Translates to: QLTLYFHTKLPKGLAANETWSLQ*LCMLCK
Trigger: TTTACACAACATGCAGAGGCACTGAAGTGACCATGT...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp TTGGAAGCATTCACTCTACTGGCTGGATTCAAAGACCTGGAGTCCTGGGAGTTAGTGGAAGCTTTACATTaGATTTTCCATCCTGAAATT +
Preference number: 4 (lower is better)
Translates to: LEAFTLLAGFKDLESWELVEALH*IFHPEI
Trigger: AATTTCAGGATGGAAAATGCAATGTAAAGCTTCCAC...TAACTCCCAGGACTCCAGGTCTTTGAATCCAGCCAGTAGAGTGAATGCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTAGATTGTCTAAAGCCTaGTTTCTATTCCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: IAELGLWSEITPYIPEYFRLSKA*FLFPQS
Trigger: GCTCTGGGGGAATAGAAAGCAGGCTTTAGACAATCT...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CTTACAGGCCCAGGAGAGGGTGTGAATATTGTTTTCAGTTTACAGCTAAAGCCCTACAGCCAGTCTTGTTaGATACAGTGTCTTCTTATA +
Preference number: 4 (lower is better)
Translates to: LTGPGEGVNIVFSLQLKPYSQSC*IQCLLI
Trigger: TATAAGAAGACACTGTATCCAACAAGACTGGCTGTA...GGGCTTTAGCTGTAAACTGAAAACAATATTCACACCCTCTCCTGGGCCTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp ACTCTGAAGCTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAAAAACAGTCTTCCTATaGGGCTCTTCCACCATAAGT +
Preference number: 4 (lower is better)
Translates to: TLKLPKALLRDIGEGHIRKTVFL*GSSTIS
Trigger: ACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTT...TCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAGCTTCAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp GGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGATCATTTCCTAATCTGGCAGAACTAGGGCTCTaGTCAGAAATAACACCTTAC +
Preference number: 4 (lower is better)
Translates to: GVLGVNLSDKLTGSFPNLAELGL*SEITPY
Trigger: GTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGC...CAGATTAGGAAATGATCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp TGTACCGTTGTTGTTGGCTTTTTAAGTGTCTTTAGCACTTCTGTTTCTAAGCATTCCTCTAGTTTCTGCTaGATTATGCAGTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: CTVVVGFLSVFSTSVSKHSSSFC*IMQWVG
Trigger: TCCCACCCACTGCATAATTCAGCAGAAACTAGAGGA...ATGCTTAGAAACAGAAGTGCTAAAGACACTTAAAAAGCCAACAACAACGGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp GGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGATCATTTCCTAATCTGAATGTGCCCACAAAATaGAACTATCAGTCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GVLGVNLSDKLTGSFPNLNVPTK*NYQSWE
Trigger: TTCCCACGACTGATAGTTCCATTTTGTGGGCACATT...CAGATTAGGAAATGATCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTAAATGTGCCCACAAAATaGAACTATCAGTCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PPEPDCYLYSLVLVIAELNVPTK*NYQSWE
Trigger: TTCCCACGACTGATAGTTCCATTTTGTGGGCACATT...TAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAACTCCATTTATCTTTATaGTGTCAATTGCAGATAACG +
Preference number: 4 (lower is better)
Translates to: QKVGVHPQTLGNVGAHKELHLSL*CQLQIT
Trigger: CGTTATCTGCAATTGACACCATAAAGATAAATGGAG...TTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CCA 90 bp CGTTTGAATGCGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCGCCAAGCTTGGTGATCTaGAGGTCTCCATTTATCTTT +
Preference number: 4 (lower is better)
Translates to: RLNAMVKIKKLVSIHKHSPSLVI*RSPFIF
Trigger: AAAGATAAATGGAGACCTCCAGATCACCAAGCTTGG...CGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462737.1
CDS-3UTR CCA 90 bp ACATCATTTAGATTAATCCCAATAGGCTTATCCAAGCGGTTCCCACTAACCTCACACCTACAGCTTAATTaGAAGCATTCACTCTACTGG +
Preference number: 4 (lower is better)
Translates to: TSFRLIPIGLSKRFPLTSHLQLN*KHSLYW
Trigger: CCAGTAGAGTGAATGCTTCCAATTAAGCTGTAGGTG...TGAGGTTAGTGGGAACCGCTTGGATAAGCCTATTGGGATTAATCTAAATGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CACAATTCCACTTTAGTGCAGAAATGCATTGATTTCACTGTACCGTTGTTGTTGGCAGAACTAGGGCTCTaGTCAGAAATAACACCTTAC +
Preference number: 4 (lower is better)
Translates to: HNSTLVQKCIDFTVPLLLAELGL*SEITPY
Trigger: GTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGC...CAACAACAACGGTACAGTGAAATCAATGCATTTCTGCACTAAAGTGGAATTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp GGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGATCATTTCCTAATCTGTTAAGTGACAAGCCATaGGAAGTTAATCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: GVLGVNLSDKLTGSFPNLLSDKP*EVNHRL
Trigger: AAGCCTGTGATTAACTTCTCATGGCTTGTCACTTAA...CAGATTAGGAAATGATCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp AGGACAAGGATGTGTCATTACAAGACACAGTATGCTGTACAAACAAAACCTAAAGCCCAGGAGAGGGTGTaGATATTGTTTTCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: RTRMCHYKTQYAVQTKPKAQERV*ILFSVY
Trigger: GTAAACTGAAAACAATATTCACACCCTCTCCTGGGC...TTTAGGTTTTGTTTGTACAGCATACTGTGTCTTGTAATGACACATCCTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTTATTCCCCCAGAGCCTaGTTGTTATTTATACTCCTT +
Preference number: 4 (lower is better)
Translates to: IAELGLWSEITPYIPEYFYSPRA*LLFILL
Trigger: AAGGAGTATAAATAACAATCAGGCTCTGGGGGAATA...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp CTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAAAAGTTATAATTTTCACACTAAGCTaGCTAAGGGCTTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LPKALLRDIGEGHIRKVIIFTLS*LRAWLL
Trigger: TAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAAT...TATAACTTTTCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACAATTAATGCCAGAAAATaGCAAGGCCGTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTINARK*QGRLSQ
Trigger: TTGAGATAAACGGCCTTGGCATTTTCTGGCATTAAT...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp TGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGAATTAATGCCAGAAAATaGCAAGGCCGTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: WIQRPGVLGVNLSDKLTGINARK*QGRLSQ
Trigger: TTGAGATAAACGGCCTTGGCATTTTCTGGCATTAAT...TCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp AATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAACTCCATTTATCTTTATaGTGTCAATTGCAGATAACG +
Preference number: 4 (lower is better)
Translates to: NQKVGVHPQTLGNVGAHKLHLSL*CQLQIT
Trigger: CGTTATCTGCAATTGACACCATAAAGATAAATGGAG...TTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CCA 90 bp CACAATTCCACTTTAGTGCAGAAATGCATTGATTTCACTGTACCGTTGTTGTTGCCAAGCTTGGTGATCTaGAGGTCTCCATTTATCTTT +
Preference number: 4 (lower is better)
Translates to: HNSTLVQKCIDFTVPLLLPSLVI*RSPFIF
Trigger: AAAGATAAATGGAGACCTCCAGATCACCAAGCTTGG...CAACAACAACGGTACAGTGAAATCAATGCATTTCTGCACTAAAGTGGAATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CACAATTCCACTTTAGTGCAGAAATGCATTGATTTCACTGTACCGTTGTTGTTGAAAGACCTGGAGTCCTaGGAGTTAACCTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: HNSTLVQKCIDFTVPLLLKDLES*ELTFQI
Trigger: TATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTT...CAACAACAACGGTACAGTGAAATCAATGCATTTCTGCACTAAAGTGGAATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp AGAGAAATAATTAGTCTTAAGGAAGCCAATAATGTGCTAATTCCCAGTAAGGAGCTTGGTTTTGGTTATTaGAGAACTAGGGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: REIISLKEANNVLIPSKELGFGY*RTRALV
Trigger: GACCAGAGCCCTAGTTCTGCAATAACCAAAACCAAG...CTCCTTACTGGGAATTAGCACATTATTGGCTTCCTTAAGACTAATTATTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp TGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGAAAAGAGTTGTTTAAATaGCCATCATCTAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: WIQRPGVLGVNLSDKLTGKELFK*PSSSFT
Trigger: GGTGAAACTAGATGATGGCCATTTAAACAACTCTTT...TCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp TGTACCGTTGTTGTTGGCTTTTTAAGTGTCTTTAGCACTTCTGTTTCTAAGCATAAACACTCGGAAACGTaGGTGCTCACAAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: CTVVVGFLSVFSTSVSKHKHSET*VLTKNF
Trigger: GAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTT...ATGCTTAGAAACAGAAGTGCTAAAGACACTTAAAAAGCCAACAACAACGGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGCTCCATTTATCTTTATaGTGTCAATTGCAGATAACG +
Preference number: 4 (lower is better)
Translates to: QLTLYFHTKLPKGLAANELHLSL*CQLQIT
Trigger: CGTTATCTGCAATTGACACCATAAAGATAAATGGAG...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTTACAGCCAGTCTTGTTaGATACAGTGTCTTCTTATA +
Preference number: 4 (lower is better)
Translates to: IAELGLWSEITPYIPEYFYSQSC*IQCLLI
Trigger: TATAAGAAGACACTGTATCCAACAAGACTGGCTGTA...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp CCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTATCTTCCACCATAAGTTaGATCAAAACTCCACAAATG +
Preference number: 4 (lower is better)
Translates to: PPEPDCYLYSLVLVIAELSSTIS*IKTPQM
Trigger: CATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGA...TAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp TTCCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTCTTCCACCATAAGTTaGATCAAAACTCCACAAATG +
Preference number: 4 (lower is better)
Translates to: FPQSLIVIYTPWFWLLQNSSTIS*IKTPQM
Trigger: CATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGA...GTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp AGGACAAGGATGTGTCATTACAAGACACAGTATGCTGTACAAACAAAACCTAAAAAAACAGTCTTCCTATaGGGCTCTTCCACCATAAGT +
Preference number: 4 (lower is better)
Translates to: RTRMCHYKTQYAVQTKPKKTVFL*GSSTIS
Trigger: ACTTATGGTGGAAGAGCCCCATAGGAAGACTGTTTT...TTTAGGTTTTGTTTGTACAGCATACTGTGTCTTGTAATGACACATCCTTGTCCT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp AGAGAAATAATTAGTCTTAAGGAAGCCAATAATGTGCTAATTCCCAGTAAGGAGAAGCATCTTCTACTCTaGAGCTTCCAAAGGCATTAC +
Preference number: 4 (lower is better)
Translates to: REIISLKEANNVLIPSKEKHLLL*SFQRHY
Trigger: GTAATGCCTTTGGAAGCTTCAGAGTAGAAGATGCTT...CTCCTTACTGGGAATTAGCACATTATTGGCTTCCTTAAGACTAATTATTTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR TCA 90 bp CTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAAAAGTTATATTGCATTTTCCATCCTaGAATTCTCACCTTAGACCT +
Preference number: 4 (lower is better)
Translates to: LPKALLRDIGEGHIRKVILHFPS*NSHLRP
Trigger: AGGTCTAAGGTGAGAATTTCAGGATGGAAAATGCAA...TATAACTTTTCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR GCA 90 bp ACATCATTTAGATTAATCCCAATAGGCTTATCCAAGCGGTTCCCACTAACCTCAGTGGAAGCTTTACATTaGATTTTCCATCCTGAAATT +
Preference number: 4 (lower is better)
Translates to: TSFRLIPIGLSKRFPLTSVEALH*IFHPEI
Trigger: AATTTCAGGATGGAAAATGCAATGTAAAGCTTCCAC...TGAGGTTAGTGGGAACCGCTTGGATAAGCCTATTGGGATTAATCTAAATGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp AGGACAAGGATGTGTCATTACAAGACACAGTATGCTGTACAAACAAAACCTAAAAAAGAGTTGTTTAAATaGCCATCATCTAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: RTRMCHYKTQYAVQTKPKKELFK*PSSSFT
Trigger: GGTGAAACTAGATGATGGCCATTTAAACAACTCTTT...TTTAGGTTTTGTTTGTACAGCATACTGTGTCTTGTAATGACACATCCTTGTCCT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp AGGACAAGGATGTGTCATTACAAGACACAGTATGCTGTACAAACAAAACCTAAAGATCATTTCCTAATCTaGATCCTATCTAATCCTACT +
Preference number: 4 (lower is better)
Translates to: RTRMCHYKTQYAVQTKPKDHFLI*ILSNPT
Trigger: AGTAGGATTAGATAGGATCCAGATTAGGAAATGATC...TTTAGGTTTTGTTTGTACAGCATACTGTGTCTTGTAATGACACATCCTTGTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CCA 90 bp AGAGAAATAATTAGTCTTAAGGAAGCCAATAATGTGCTAATTCCCAGTAAGGAGGATCATTTCCTAATCTaGATCCTATCTAATCCTACT +
Preference number: 4 (lower is better)
Translates to: REIISLKEANNVLIPSKEDHFLI*ILSNPT
Trigger: AGTAGGATTAGATAGGATCCAGATTAGGAAATGATC...CTCCTTACTGGGAATTAGCACATTATTGGCTTCCTTAAGACTAATTATTTCTCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS GCA 90 bp CGGACCCGGGCCGACGGGGCTGCTTGCTGCCGCTGCCGCTGCCGCTaGCCGACCAAGAAAAGTGGCGAGGGCCGTGCCGCGTCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RTRADGAACCRCRCR*PTKKSGEGRAASAL
Trigger: CAGGGCCGACGCGGCACGGCCCTCGCCACTTTTCTTGGTCGGGCAGCGGCAGCGGCAGCGGCAGCAAGCAGCCCCGTCGGCCCGGGTCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS GCA 90 bp CCGCTGCCGCTGCCGCTGCCCGACCAAGAAAAGTGGCGAGGGCCGTaGCGCGTCGGCCCTGGGCAGCATTTAAAGGCCTCCGGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PLPLPLPDQEKWRGP*RVGPGQHLKASGAR
Trigger: CCGGGCCCCGGAGGCCTTTAAATGCTGCCCAGGGCCGACGCGGCACGGCCCTCGCCACTTTTCTTGGTCGGGCAGCGGCAGCGGCAGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS CCA 90 bp GCTGCCCGACCAAGAAAAGTGGCGAGGGCCGTGCCGCGTCGGCCCTaGGCAGCATTTAAAGGCCTCCGGGGCCCGGCTCGGGAACCGGGA +
Preference number: 5 (lower is better)
Translates to: AARPRKVARAVPRRP*AAFKGLRGPAREPG
Trigger: TCCCGGTTCCCGAGCCGGGCCCCGGAGGCCTTTAAATGCTGCCCAGGGCCGACGCGGCACGGCCCTCGCCACTTTTCTTGGTCGGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR CAA 90 bp TTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACGATCCCGCCATCTTCTaGCCCGGCGCGGCGGGGTAC +
Preference number: 5 (lower is better)
Translates to: LVSIHKHSETWVLTKNFHDPAIF*PGAAGY
Trigger: GTACCCCGCCGCGCCGGGCAAGAAGATGGCGGGATC...GTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS TCA 90 bp GAACACAGCTTTGAGTTCGATTGCCACATCGGCAGGAGGGTCTTCTaGGTCCCCACAGGTCAAGCTGATTGCAAAGCACCACGGCATCGC +
Preference number: 5 (lower is better)
Translates to: EHSFEFDCHIGRRVF*VPTGQADCKAPRHR
Trigger: GCGATGCCGTGGTGCTTTGCAATCAGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462737.1
CDS-3UTR CAA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGGGAGGGCGAAGGTGCTaGCCGCGGCCCAGAACGGCC +
Preference number: 5 (lower is better)
Translates to: QLTLYFHTKLPKGLAANEGGRRC*PRPRTA
Trigger: GGCCGTTCTGGGCCGCGGCAAGCACCTTCGCCCTCC...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR CAA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGGATCCCGCCATCTTCTaGCCCGGCGCGGCGGGGTAC +
Preference number: 5 (lower is better)
Translates to: QLTLYFHTKLPKGLAANEDPAIF*PGAAGY
Trigger: GTACCCCGCCGCGCCGGGCAAGAAGATGGCGGGATC...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS TCA 90 bp GAACACAGCTTTGAGTTCGATTGCCACATCGGCAGGAGGGTCTTCTaGGTCCCCACAGGTCAAGCTGATTGCAAAGCTCTCTGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: EHSFEFDCHIGRRVF*VPTGQADCKALWVE
Trigger: CTCAACCCAGAGAGCTTTGCAATCAGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000464281.5
CDS-3UTR CAA 90 bp TGGTTTAAATCAGCCAAGCTTGGTGATCTGGAGGTCTCCATTTATCTTTATGGTGATCCCGCCATCTTCTaGCCCGGCGCGGCGGGGTAC +
Preference number: 5 (lower is better)
Translates to: WFKSAKLGDLEVSIYLYGDPAIF*PGAAGY
Trigger: GTACCCCGCCGCGCCGGGCAAGAAGATGGCGGGATC...ACCATAAAGATAAATGGAGACCTCCAGATCACCAAGCTTGGCTGATTTAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462737.1
CDS-3UTR CAA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCATCACTAACACCTTCTaGCCTGGTCTCATGCCACCT +
Preference number: 5 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATITNTF*PGLMPP
Trigger: AGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGAT...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCAGTGGGTGGGAATGGTaGGCCACTCAAAACAGTCTT +
Preference number: 5 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATSGWEW*ATQNSL
Trigger: AAGACTGTTTTGAGTGGCCAACCATTCCCACCCACT...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp TTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGGGGCTCAAGCTGCCTAAGGGCTaGGCTGCTAATGAGTTAGCT +
Preference number: 5 (lower is better)
Translates to: LCSGWEWLATQNSLPMGLKLPKG*AANELA
Trigger: AGCTAACTCATTAGCAGCCAAGCCCTTAGGCAGCTT...GAGCCCCATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp ATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTGAATGGATCCCACTCTCTGGGTaGAGGTCTACGATGCCCATC +
Preference number: 5 (lower is better)
Translates to: IHKHSETWVLTKNFHPEWIPLSG*RSTMPI
Trigger: GATGGGCATCGTAGACCTCAACCCAGAGAGTGGGAT...CCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR CAA 90 bp GTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTATCACTAACACCTTCTaGCCTGGTCTCATGCCACCT +
Preference number: 5 (lower is better)
Translates to: VSIHKHSETWVLTKNFHPITNTF*PGLMPP
Trigger: AGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGAT...AGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR CAA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCAATGGCTCGGTGTCTTaGTCCCAACAGCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATNGSVS*SQQLSS
Trigger: AGAAGAAAGCTGTTGGGACAAAGACACCGAGCCATT...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp GGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATAGCAAAGCTCTCTGGGTaGAGGTCTACGATGCCCATC +
Preference number: 5 (lower is better)
Translates to: GYCRTRALVRNNTLHTRIAKLSG*RSTMPI
Trigger: GATGGGCATCGTAGACCTCAACCCAGAGAGCTTTGC...TATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR CAA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTCTGTGAACACAGCTTaGAGTTCGATTGCCACATCG +
Preference number: 5 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVSVNTA*SSIATS
Trigger: CGATGTGGCAATCGAACTCAAAGCTGTGTTCACAGA...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR CAA 90 bp ACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTACAGTACTGCAACCAATGTACAGCCAGTCTaGTTGGATACAGTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: TQDFKHPLPCGDVYSTATNVQPV*LDTVSS
Trigger: AGAAGACACTGTATCCAACAAGACTGGCTGTACATT...GGTTGCAGTACTGTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CTTCCAAGTAAGTTATTCAGGGCCGTTTGCTTCTGCTTTACACTGCATTCCACAGAAGTACACGTCCGCTaGAACTGGAGAGCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: LPSKLFRAVCFCFTLHSTEVHVR*NWRAQR
Trigger: TCTTTGAGCTCTCCAGTTCAAGCGGACGTGTACTTC...TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAACTTACTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp GGGCTCTTCCACCATAAGTTGGATCAAAACTCCACAAATGTATTTCAAGGTGCCAGTGGGTGGGAATGGTaGGCCACTCAAAACAGTCTT +
Preference number: 5 (lower is better)
Translates to: GLFHHKLDQNSTNVFQGASGWEW*ATQNSL
Trigger: AAGACTGTTTTGAGTGGCCAACCATTCCCACCCACT...GGCACCTTGAAATACATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp GGGCTCTTCCACCATAAGTTGGATCAAAACTCCACAAATGTATTTCAAGGTGCCAAGCTGCCTAAGGGCTaGGCTGCTAATGAGTTAGCT +
Preference number: 5 (lower is better)
Translates to: GLFHHKLDQNSTNVFQGAKLPKG*AANELA
Trigger: AGCTAACTCATTAGCAGCCAAGCCCTTAGGCAGCTT...GGCACCTTGAAATACATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp TTCCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTTCCACCTCTCTGGGTaGAGGTCTACGATGCCCATC +
Preference number: 5 (lower is better)
Translates to: FPQSLIVIYTPWFWLLQNFHLSG*RSTMPI
Trigger: GATGGGCATCGTAGACCTCAACCCAGAGAGGTGGAA...GTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409537.2
CDS-3UTR CAA 90 bp ACTCTGAAGCTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAGAAGTACACGTCCGCTaGAACTGGAGAGCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: TLKLPKALLRDIGEGHIREVHVR*NWRAQR
Trigger: TCTTTGAGCTCTCCAGTTCAAGCGGACGTGTACTTC...TCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAGCTTCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp AATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAATCTGTGAACACAGCTTaGAGTTCGATTGCCACATCG +
Preference number: 5 (lower is better)
Translates to: NQKVGVHPQTLGNVGAHKSVNTA*SSIATS
Trigger: CGATGTGGCAATCGAACTCAAAGCTGTGTTCACAGA...TTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CAA 90 bp GGGCTCTTCCACCATAAGTTGGATCAAAACTCCACAAATGTATTTCAAGGTGCCATGGAAAGTAAGGGATaGCTGACTGTTCTTCACCCC +
Preference number: 5 (lower is better)
Translates to: GLFHHKLDQNSTNVFQGAMESKG*LTVLHP
Trigger: GGGGTGAAGAACAGTCAGCAATCCCTTACTTTCCAT...GGCACCTTGAAATACATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS-3UTR CAA 90 bp AAATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAATGGAAAGTAAGGGATaGCTGACTGTTCTTCACCCC +
Preference number: 5 (lower is better)
Translates to: KSKSWCPSTNTRKRGCSQMESKG*LTVLHP
Trigger: GGGGTGAAGAACAGTCAGCAATCCCTTACTTTCCAT...TTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CAA 90 bp ATCTTGCTAGGACACTTCTTCCAGACCAACAGTCAGATAGTTGTGGCACGTGATTTAAGTCTCCAGATCTaGCTAGGACACTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ILLGHFFQTNSQIVVARDLSLQI*LGHFFQ
Trigger: CTGGAAGAAGTGTCCTAGCAAGATCTGGAGACTTAA...ATCACGTGCCACAACTATCTGACTGTTGGTCTGGAAGAAGTGTCCTAGCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CTTCCAAGTAAGTTATTCAGGGCCGTTTGCTTCTGCTTTACACTGCATTCCACAAATGGCTCGGTGTCTTaGTCCCAACAGCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LPSKLFRAVCFCFTLHSTNGSVS*SQQLSS
Trigger: AGAAGAAAGCTGTTGGGACAAAGACACCGAGCCATT...TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAACTTACTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp TGTCCATCCACAAACACTCGGAAACGTGGGTGCTCACAAAGAATTTCCACCCTGTCTTTATGGTGTCAATaGCAGATAACGTTTGAATGC +
Preference number: 5 (lower is better)
Translates to: CPSTNTRKRGCSQRISTLSLWCQ*QITFEC
Trigger: GCATTCAAACGTTATCTGCAATTGACACCATAAAGA...CAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CAA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGTTAAATCAGCCAAGCTaGGTGATCTGGAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: QLTLYFHTKLPKGLAANELNQPS*VIWRSP
Trigger: TGGAGACCTCCAGATCACCAAGCTTGGCTGATTTAA...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CAGAATAAGCGTGTCAATTCCAATCAGTACACGCCCTGCTCCTCTAGTTTCTGCACCCTGACTAAAATATaGGTTGTGCTACACAATTCC +
Preference number: 5 (lower is better)
Translates to: QNKRVNSNQYTPCSSSFCTLTKI*VVLHNS
Trigger: GGAATTGTGTAGCACAACCAATATTTTAGTCAGGGT...GCAGAAACTAGAGGAGCAGGGCGTGTACTGATTGGAATTGACACGCTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp ATAGGCTTATCCAAGCGGTTCCCACTAACCTCACAGAGAAACAAACAGTTAACAGTTATTCAGGGCCGTTaGCTTCTGCTTTACACTGCA +
Preference number: 5 (lower is better)
Translates to: IGLSKRFPLTSQRNKQLTVIQGR*LLLYTA
Trigger: TGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAAC...TGTTAACTGTTTGTTTCTCTGTGAGGTTAGTGGGAACCGCTTGGATAAGCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp ACTCTGAAGCTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAGTTGGAGTCACCTGTTaGATCAGTTCCGTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: TLKLPKALLRDIGEGHIRVGVTC*ISSVSA
Trigger: TGCACTTACGGAACTGATCAAACAGGTGACTCCAAC...TCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAGCTTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp TTCCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACGACTTTAAGCATCCCTaGCCTTGCGGTGACGTTTAC +
Preference number: 5 (lower is better)
Translates to: FPQSLIVIYTPWFWLLQNDFKHP*PCGDVY
Trigger: GTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTC...GTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp GCTGAATTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGAAGTTAATCACAGGCTaGAAAATACCTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: AELCSGWEWLATQNSLPMKLITG*KIPGTT
Trigger: TGTGGTTCCAGGTATTTTCAAGCCTGTGATTAACTT...CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp GCTGAATTATGCAGTGGGTGGGAATGGTTGGCCACTCAAAACAGTCTTCCTATGGTAGAAATGGACAGATaGTCTAAAGCCTGCTTTCTA +
Preference number: 5 (lower is better)
Translates to: AELCSGWEWLATQNSLPMVEMDR*SKACFL
Trigger: TAGAAAGCAGGCTTTAGACAATCTGTCCATTTCTAC...CATAGGAAGACTGTTTTGAGTGGCCAACCATTCCCACCCACTGCATAATTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CTTCCAAGTAAGTTATTCAGGGCCGTTTGCTTCTGCTTTACACTGCATTCCACAGGAGAGCTCAAAGAGTaGTTTAAATGGCCATCATCT +
Preference number: 5 (lower is better)
Translates to: LPSKLFRAVCFCFTLHSTGELKE*FKWPSS
Trigger: AGATGATGGCCATTTAAACAACTCTTTGAGCTCTCC...TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAACTTACTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp ACGTTTGAATGCGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCGAAGTACACGTCCGCTaGAACTGGAGAGCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: TFECDGKNQKVGVHPQTLEVHVR*NWRAQR
Trigger: TCTTTGAGCTCTCCAGTTCAAGCGGACGTGTACTTC...GAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAAACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS-3UTR CAA 90 bp CTTTTAAAGTCCAGAACCCAGGACTTTAAGCATCCCTTGCCTTGCGGTGACGTTTCTTTATGGTGTCAATaGCAGATAACGTTTGAATGC +
Preference number: 5 (lower is better)
Translates to: LLKSRTQDFKHPLPCGDVSLWCQ*QITFEC
Trigger: GCATTCAAACGTTATCTGCAATTGACACCATAAAGA...AACGTCACCGCAAGGCAAGGGATGCTTAAAGTCCTGGGTTCTGGACTTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CAGTTAACATTGTATTTTCACACTAAGCTGCCTAAGGGCTTGGCTGCTAATGAGTTAAGTCTCCAGATCTaGCTAGGACACTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: QLTLYFHTKLPKGLAANELSLQI*LGHFFQ
Trigger: CTGGAAGAAGTGTCCTAGCAAGATCTGGAGACTTAA...CTCATTAGCAGCCAAGCCCTTAGGCAGCTTAGTGTGAAAATACAATGTTAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTAGTTATTCAGGGCCGTTaGCTTCTGCTTTACACTGCA +
Preference number: 5 (lower is better)
Translates to: PPEPDCYLYSLVLVIAELVIQGR*LLLYTA
Trigger: TGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAAC...TAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp ATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAATACTTTGTTGGAGTCACCTGTTaGATCAGTTCCGTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: IAELGLWSEITPYIPEYFVGVTC*ISSVSA
Trigger: TGCACTTACGGAACTGATCAAACAGGTGACTCCAAC...AAAGTATTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CACAATTCCACTTTAGTGCAGAAATGCATTGATTTCACTGTACCGTTGTTGTTGGACTTTAAGCATCCCTaGCCTTGCGGTGACGTTTAC +
Preference number: 5 (lower is better)
Translates to: HNSTLVQKCIDFTVPLLLDFKHP*PCGDVY
Trigger: GTAAACGTCACCGCAAGGCAAGGGATGCTTAAAGTC...CAACAACAACGGTACAGTGAAATCAATGCATTTCTGCACTAAAGTGGAATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp ATCTTGCTAGGACACTTCTTCCAGACCAACAGTCAGATAGTTGTGGCACGTGATCTCTTCCACCATAAGTaGGATCAAAACTCCACAAAT +
Preference number: 5 (lower is better)
Translates to: ILLGHFFQTNSQIVVARDLFHHK*DQNSTN
Trigger: ATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAG...ATCACGTGCCACAACTATCTGACTGTTGGTCTGGAAGAAGTGTCCTAGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CTTCCAAAGGCATTACTTAGGGATATTGGTGAGGGTCACATAAGAAAAGTTATAATCACTAACACCTTCTaGCCTGGTCTCATGCCACCT +
Preference number: 5 (lower is better)
Translates to: LPKALLRDIGEGHIRKVIITNTF*PGLMPP
Trigger: AGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGAT...TATAACTTTTCTTATGTGACCCTCACCAATATCCCTAAGTAATGCCTTTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp ACGTTTGAATGCGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCTCTGTGAACACAGCTTaGAGTTCGATTGCCACATCG +
Preference number: 5 (lower is better)
Translates to: TFECDGKNQKVGVHPQTLSVNTA*SSIATS
Trigger: CGATGTGGCAATCGAACTCAAAGCTGTGTTCACAGA...GAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAAACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CAA 90 bp TTGAATGCGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAAATGGAAAGTAAGGGATaGCTGACTGTTCTTCACCCC +
Preference number: 5 (lower is better)
Translates to: LNAMVKIKKLVSIHKHSEMESKG*LTVLHP
Trigger: GGGGTGAAGAACAGTCAGCAATCCCTTACTTTCCAT...TTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CAA 90 bp TTGAATGCGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCGGAATTAAATCAGCCAAGCTaGGTGATCTGGAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LNAMVKIKKLVSIHKHSELNQPS*VIWRSP
Trigger: TGGAGACCTCCAGATCACCAAGCTTGGCTGATTTAA...TTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462737.1
CDS-3UTR CAA 90 bp CTTCCAAGTAAGTTATTCAGGGCCGTTTGCTTCTGCTTTACACTGCATTCCACATTATACTCCTTGGTTTaGGTTATTGCAGAACTAGGG +
Preference number: 5 (lower is better)
Translates to: LPSKLFRAVCFCFTLHSTLYSLV*VIAELG
Trigger: CCCTAGTTCTGCAATAACCAAAACCAAGGAGTATAA...TGTGGAATGCAGTGTAAAGCAGAAGCAAACGGCCCTGAATAACTTACTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp TGGATTCAAAGACCTGGAGTCCTGGGAGTTAACCTTTCAGATAAACTAACTGGACTCTTCCACCATAAGTaGGATCAAAACTCCACAAAT +
Preference number: 5 (lower is better)
Translates to: WIQRPGVLGVNLSDKLTGLFHHK*DQNSTN
Trigger: ATTTGTGGAGTTTTGATCCAACTTATGGTGGAAGAG...TCCAGTTAGTTTATCTGAAAGGTTAACTCCCAGGACTCCAGGTCTTTGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp AGAGAAATAATTAGTCTTAAGGAAGCCAATAATGTGCTAATTCCCAGTAAGGAGTTAAATCAGCCAAGCTaGGTGATCTGGAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: REIISLKEANNVLIPSKELNQPS*VIWRSP
Trigger: TGGAGACCTCCAGATCACCAAGCTTGGCTGATTTAA...CTCCTTACTGGGAATTAGCACATTATTGGCTTCCTTAAGACTAATTATTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTAACCCTGACTAAAATATaGGTTGTGCTACACAATTCC +
Preference number: 5 (lower is better)
Translates to: PPEPDCYLYSLVLVIAELTLTKI*VVLHNS
Trigger: GGAATTGTGTAGCACAACCAATATTTTAGTCAGGGT...TAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp TTGGTTATTGCAGAACTAGGGCTCTGGTCAGAAATAACACCTTACATACCCGAAACACTGTCTACATTCTaGACACTTGAAAATGACATG +
Preference number: 5 (lower is better)
Translates to: LVIAELGLWSEITPYIPETLSTF*TLENDM
Trigger: CATGTCATTTTCAAGTGTCAAGAATGTAGACAGTGT...TTCGGGTATGTAAGGTGTTATTTCTGACCAGAGCCCTAGTTCTGCAATAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CACAATTCCACTTTAGTGCAGAAATGCATTGATTTCACTGTACCGTTGTTGTTGAATGTACAGCCAGTCTaGTTGGATACAGTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: HNSTLVQKCIDFTVPLLLNVQPV*LDTVSS
Trigger: AGAAGACACTGTATCCAACAAGACTGGCTGTACATT...CAACAACAACGGTACAGTGAAATCAATGCATTTCTGCACTAAAGTGGAATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CCCCCAGAGCCTGATTGTTATTTATACTCCTTGGTTTTGGTTATTGCAGAACTAACACTGTCTACATTCTaGACACTTGAAAATGACATG +
Preference number: 5 (lower is better)
Translates to: PPEPDCYLYSLVLVIAELTLSTF*TLENDM
Trigger: CATGTCATTTTCAAGTGTCAAGAATGTAGACAGTGT...TAGTTCTGCAATAACCAAAACCAAGGAGTATAAATAACAATCAGGCTCTGGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp CACAATTCCACTTTAGTGCAGAAATGCATTGATTTCACTGTACCGTTGTTGTTGAAGTTAATCACAGGCTaGAAAATACCTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: HNSTLVQKCIDFTVPLLLKLITG*KIPGTT
Trigger: TGTGGTTCCAGGTATTTTCAAGCCTGTGATTAACTT...CAACAACAACGGTACAGTGAAATCAATGCATTTCTGCACTAAAGTGGAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp ACGTTTGAATGCGATGGTAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCTCTTTATGGTGTCAATaGCAGATAACGTTTGAATGC +
Preference number: 5 (lower is better)
Translates to: TFECDGKNQKVGVHPQTLSLWCQ*QITFEC
Trigger: GCATTCAAACGTTATCTGCAATTGACACCATAAAGA...GAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAAACGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420552.5
ENST00000462737.1
CDS-3UTR CAA 90 bp TGTACCGTTGTTGTTGGCTTTTTAAGTGTCTTTAGCACTTCTGTTTCTAAGCATTTATACTCCTTGGTTTaGGTTATTGCAGAACTAGGG +
Preference number: 5 (lower is better)
Translates to: CTVVVGFLSVFSTSVSKHLYSLV*VIAELG
Trigger: CCCTAGTTCTGCAATAACCAAAACCAAGGAGTATAA...ATGCTTAGAAACAGAAGTGCTAAAGACACTTAAAAAGCCAACAACAACGGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS-3UTR CAA 90 bp TGTACCGTTGTTGTTGGCTTTTTAAGTGTCTTTAGCACTTCTGTTTCTAAGCATTCTTTATGGTGTCAATaGCAGATAACGTTTGAATGC +
Preference number: 5 (lower is better)
Translates to: CTVVVGFLSVFSTSVSKHSLWCQ*QITFEC
Trigger: GCATTCAAACGTTATCTGCAATTGACACCATAAAGA...ATGCTTAGAAACAGAAGTGCTAAAGACACTTAAAAAGCCAACAACAACGGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2
CDS GCA 72 bp GAGGGAGGCAGCGCGAGCTGGGAGGGCGAAGGTGCTTaGCGCGGCCCAGAACGGCCCCGGACCCGGGCCGAC +
Preference number: 6 (lower is better)
Translates to: EGGSASWEGEGA*RGPERPRTRAD
Trigger: GTCGGCCCGGGTCCGGGGCCGTTCTGGGCCGCGGCAAGCACCTTCGCCCTCCCAGCTCGCGCTGCCTCCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS CAA 72 bp GGAGGGAGGCAGCGCGAGCTGGGAGGGCGAAGGTGCTaGCCGCGGCCCAGAACGGCCCCGGACCCGGGCCGA +
Preference number: 6 (lower is better)
Translates to: GGRQRELGGRRC*PRPRTAPDPGR
Trigger: TCGGCCCGGGTCCGGGGCCGTTCTGGGCCGCGGCAAGCACCTTCGCCCTCCCAGCTCGCGCTGCCTCCCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS CCA 72 bp CCTGGGAGGAGGGGAGGGGAGGGAGGCAGCGCGAGCTaGGAGGGCGAAGGTGCTTGCCGCGGCCCAGAACGG +
Preference number: 6 (lower is better)
Translates to: PGRRGGEGGSAS*EGEGACRGPER
Trigger: CCGTTCTGGGCCGCGGCAAGCACCTTCGCCCTCCCAGCTCGCGCTGCCTCCCTCCCCTCCCCTCCTCCCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS CCA 72 bp CCAAGAAAAGTGGCGAGGGCCGTGCCGCGTCGGCCCTaGGCAGCATTTAAAGGCCTCCGGGGCCCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: PRKVARAVPRRP*AAFKGLRGPAR
Trigger: CCGAGCCGGGCCCCGGAGGCCTTTAAATGCTGCCCAGGGCCGACGCGGCACGGCCCTCGCCACTTTTCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS GCA 72 bp CTGCCGCTGCCCGACCAAGAAAAGTGGCGAGGGCCGTaGCGCGTCGGCCCTGGGCAGCATTTAAAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LPLPDQEKWRGP*RVGPGQHLKAS
Trigger: GGAGGCCTTTAAATGCTGCCCAGGGCCGACGCGGCACGGCCCTCGCCACTTTTCTTGGTCGGGCAGCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238875.10
CDS TCA 72 bp CTGATTGCAAAGCACCACGGCATCGCTGTCGGCCACTaGTCCCGCCATCTTCTTGCCCGGCGCGGCGGGGTA +
Preference number: 6 (lower is better)
Translates to: LIAKHHGIAVGH*SRHLLARRGGV
Trigger: TACCCCGCCGCGCCGGGCAAGAAGATGGCGGGATCAGTGGCCGACAGCGATGCCGTGGTGCTTTGCAATCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462737.1
CDS TCA 72 bp TTTGAGTTCGATTGCCACATCGGCAGGAGGGTCTTCTaGGTCCCCACAGGTCAAGCTGATTGCAAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: FEFDCHIGRRVF*VPTGQADCKAL
Trigger: GAGAGCTTTGCAATCAGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCCGATGTGGCAATCGAACTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000464281.5
CDS TCA 72 bp TTTGAGTTCGATTGCCACATCGGCAGGAGGGTCTTCTaGGTCCCCACAGGTCAAGCTGATTGCAAAGCACCA +
Preference number: 6 (lower is better)
Translates to: FEFDCHIGRRVF*VPTGQADCKAP
Trigger: TGGTGCTTTGCAATCAGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCCGATGTGGCAATCGAACTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462737.1
CDS TCA 72 bp TTTGAGTTCGATTGCCACATCGGCAGGAGGGTCTTCTaGGTCCCCACAGGTCAAGCTGATTGCAAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: FEFDCHIGRRVF*VPTGQADCKAE
Trigger: TTCAGCTTTGCAATCAGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCCGATGTGGCAATCGAACTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS CAA 72 bp GGGTTGAGGTCTACGATGCCCATCACTAACACCTTCTaGCCTGGTCTCATGCCACCTTTAATGTGCCCACAA +
Preference number: 6 (lower is better)
Translates to: GLRSTMPITNTF*PGLMPPLMCPQ
Trigger: TTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGATGGGCATCGTAGACCTCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238875.10
ENST00000409537.2
ENST00000420552.5
ENST00000464281.5
CDS CAA 90 bp CACCTCTCTGGGTTGAGGTCTACGATGCCCATCACTAACACCTTCTaGCCTGGTCTCATGCCACCTTTAATGTGCCCACAAAATGGAACT +
Preference number: 6 (lower is better)
Translates to: HLSGLRSTMPITNTF*PGLMPPLMCPQNGT
Trigger: AGTTCCATTTTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGATGGGCATCGTAGACCTCAACCCAGAGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409537.2
CDS CAA 90 bp CCACTCTCTGGGTTGAGGTCTACGATGCCCATCACTAACACCTTCTaGCCTGGTCTCATGCCACCTTTAATGTGCCCACAAAATGGAACT +
Preference number: 6 (lower is better)
Translates to: PLSGLRSTMPITNTF*PGLMPPLMCPQNGT
Trigger: AGTTCCATTTTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGATGGGCATCGTAGACCTCAACCCAGAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420552.5
CDS CAA 90 bp AAGCTCTCTGGGTTGAGGTCTACGATGCCCATCACTAACACCTTCTaGCCTGGTCTCATGCCACCTTTAATGTGCCCACAAAATGGAACT +
Preference number: 6 (lower is better)
Translates to: KLSGLRSTMPITNTF*PGLMPPLMCPQNGT
Trigger: AGTTCCATTTTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGATGGGCATCGTAGACCTCAACCCAGAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000464281.5
CDS CCA 72 bp AAAAAGTTGGTGTCCATCCACAAACACTCGGAAACGTaGGTGCTCACAAAGAATTTCCACCTCTCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: KKLVSIHKHSET*VLTKNFHLSGL
Trigger: CAACCCAGAGAGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409537.2
CDS CCA 72 bp AATAGAGGTGGTTTAAATCAGCCAAGCTTGGTGATCTaGAGGTCTCCATTTATCTTTATGGTGTCAATTGCA +
Preference number: 6 (lower is better)
Translates to: NRGGLNQPSLVI*RSPFIFMVSIA
Trigger: TGCAATTGACACCATAAAGATAAATGGAGACCTCCAGATCACCAAGCTTGGCTGATTTAAACCACCTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238875.10
ENST00000409537.2