Pregenerated sensors for LGALS9C (Homo sapiens)
Ensembl gene IDs: ENSG00000171916Ensembl transcript IDs: ENST00000577265.5, ENST00000578563.1, ENST00000584127.1, ENST00000638447.1, ENST00000638896.1, ENST00000639218.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CCCGACCAGGCCCCAGTGTGTGTTGTTTCCCCGCTTGTGTCCATGTGTTCTCATCGGTGTTTGGTTTTCTaGTCCTGCAACGGCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PDQAPVCVVSPLVSMCSHRCLVF*SCNGFQ Trigger: CTGGAAGCCGTTGCAGGAGCAGAAAACCAAACACCG...ATGAGAACACATGGACACAAGCGGGGAAACAACACACACTGGGGCCTGGTCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000578563.1 ENST00000638896.1 |
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| CDS-3UTR GCA 90 bp | CGACCAGGCCCCAGTGTGTGTTGTTTCCCCGCTTGTGTCCATGTGTTCTCATCGTTGGTTTTCTGCTCCTaGAACGGCTTCCAGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RPGPSVCCFPACVHVFSSLVFCS*NGFQLH Trigger: ATGGAGCTGGAAGCCGTTGCAGGAGCAGAAAACCAA...CGATGAGAACACATGGACACAAGCGGGGAAACAACACACACTGGGGCCTGGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000578563.1 ENST00000638896.1 |
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| CDS CCA 90 bp | AGTGCCAGGCACTGTGCAAATGAACGACCCACAGTCCCAGCCCTCTaGGGCCTCATGGGCATAGGGAGATGGGGGTGGAGTGACAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: SARHCANERPTVPAL*GLMGIGRWGWSDRD Trigger: GTCCCTGTCACTCCACCCCCATCTCCCTATGCCCATGAGGCCCCAGAGGGCTGGGACTGTGGGTCGTTCATTTGCACAGTGCCTGGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS CCA 90 bp | TGGCAGAGGGTGCTTCCGGGACCAGGGACAGCATATGCAAAAGCATaGTGGCCCGAGAGGGCCTTGAGTGAGCCGTGGAGGTTGCATGAG | + |
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Preference number: 5 (lower is better) Translates to: WQRVLPGPGTAYAKA*WPERALSEPWRLHE Trigger: CTCATGCAACCTCCACGGCTCACTCAAGGCCCTCTCGGGCCACCATGCTTTTGCATATGCTGTCCCTGGTCCCGGAAGCACCCTCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577265.5 ENST00000639218.1 |
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| CDS CCA 90 bp | CGACCCACAGTCCCAGCCCTCTGGGGCCTCATGGGCATAGGGAGATaGGGGTGGAGTGACAGGGACAGACACGCAAACAGTTACAATGGG | + |
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Preference number: 5 (lower is better) Translates to: RPTVPALWGLMGIGR*GWSDRDRHANSYNG Trigger: CCCATTGTAACTGTTTGCGTGTCTGTCCCTGTCACTCCACCCCCATCTCCCTATGCCCATGAGGCCCCAGAGGGCTGGGACTGTGGGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS CCA 90 bp | TTGGCAGAGCATGGAAGGGCGATTAGGCGTGTGCTGAGGGCAGGCTaGCAGAGGGTGCTTCCGGGACCAGGGACAGCATATGCAAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LAEHGRAIRRVLRAG*QRVLPGPGTAYAKA Trigger: TGCTTTTGCATATGCTGTCCCTGGTCCCGGAAGCACCCTCTGCCAGCCTGCCCTCAGCACACGCCTAATCGCCCTTCCATGCTCTGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS TCA 90 bp | CATCCATTCTTCGAGTCCCTAAGTGAGTGCCAGGCACTGTGCAAATaGACGACCCACAGTCCCAGCCCTCTGGGGCCTCATGGGCATAGG | + |
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Preference number: 5 (lower is better) Translates to: HPFFESLSECQALCK*TTHSPSPLGPHGHR Trigger: CCTATGCCCATGAGGCCCCAGAGGGCTGGGACTGTGGGTCGTTCATTTGCACAGTGCCTGGCACTCACTTAGGGACTCGAAGAATGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS TCA 90 bp | CCAAAGAGGGAAGCAGCCTCAGCTCCTGTGTCCCTGGTGAGGCAATaGGGCTCAGAAAGATTAAGCAACTTGCCCAAGCTTGCCCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: PKREAASAPVSLVRQ*GSERLSNLPKLARV Trigger: CACCCGGGCAAGCTTGGGCAAGTTGCTTAATCTTTCTGAGCCTCATTGCCTCACCAGGGACACAGGAGCTGAGGCTGCTTCCCTCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS TCA 90 bp | GCCCGGGTGGAAGGGATCAAATCCAAAATGGCAGCCAATTCTGTCTaGCTGTATCCAGCACACTTTCTGTCATCCCTAGGGCCAGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: ARVEGIKSKMAANSV*LYPAHFLSSLGPGP Trigger: TGGCCCTGGCCCTAGGGATGACAGAAAGTGTGCTGGATACAGTCAGACAGAATTGGCTGCCATTTTGGATTTGATCCCTTCCACCCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS GCA 90 bp | GGTGAGGCAATGAGGCTCAGAAAGATTAAGCAACTTGCCCAAGCTTaGCCGGGTGGAAGGGATCAAATCCAAAATGGCAGCCAATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GEAMRLRKIKQLAQA*PGGRDQIQNGSQFC Trigger: ACAGAATTGGCTGCCATTTTGGATTTGATCCCTTCCACCCGGGCAAGCTTGGGCAAGTTGCTTAATCTTTCTGAGCCTCATTGCCTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS CCA 90 bp | GCAACTTGCCCAAGCTTGCCCGGGTGGAAGGGATCAAATCCAAAATaGCAGCCAATTCTGTCTGACTGTATCCAGCACACTTTCTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: ATCPSLPGWKGSNPK*QPILSDCIQHTFCH Trigger: ATGACAGAAAGTGTGCTGGATACAGTCAGACAGAATTGGCTGCCATTTTGGATTTGATCCCTTCCACCCGGGCAAGCTTGGGCAAGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS TCA 90 bp | CCGCTTGTGTCCATGTGTTCTCATCGTTCAGCTCCTACTTATAAGTaGGAACTTGCGGTGTTTGGTTTTCTGCTCCTGCAACGGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: PLVSMCSHRSAPTYK*ELAVFGFLLLQRLP Trigger: TGGAAGCCGTTGCAGGAGCAGAAAACCAAACACCGCAAGTTCTCACTTATAAGTAGGAGCTGAACGATGAGAACACATGGACACAAGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578563.1 ENST00000638896.1 |
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| CDS TCA 72 bp | CTTTGGCAGAGCATGGAAGGGCGATTAGGCGTGTGCTaGGGGCAGGCTGGCAGAGGGTGCTTCCGGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: LWQSMEGRLGVC*GQAGRGCFRDQ Trigger: CTGGTCCCGGAAGCACCCTCTGCCAGCCTGCCCTCAGCACACGCCTAATCGCCCTTCCATGCTCTGCCAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS CCA 72 bp | CATGGAAGGGCGATTAGGCGTGTGCTGAGGGCAGGCTaGCAGAGGGTGCTTCCGGGACCAGGGACAGCATAT | + |
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Preference number: 6 (lower is better) Translates to: HGRAIRRVLRAG*QRVLPGPGTAY Trigger: ATATGCTGTCCCTGGTCCCGGAAGCACCCTCTGCCAGCCTGCCCTCAGCACACGCCTAATCGCCCTTCCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS CCA 72 bp | GTCCCAGCCCTCTGGGGCCTCATGGGCATAGGGAGATaGGGGTGGAGTGACAGGGACAGACACGCAAACAGT | + |
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Preference number: 6 (lower is better) Translates to: VPALWGLMGIGR*GWSDRDRHANS Trigger: ACTGTTTGCGTGTCTGTCCCTGTCACTCCACCCCCATCTCCCTATGCCCATGAGGCCCCAGAGGGCTGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS CCA 72 bp | CTTCCGGGACCAGGGACAGCATATGCAAAAGCATGGTaGCCCGAGAGGGCCTTGAGTGAGCCGTGGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LPGPGTAYAKAW*PERALSEPWRL Trigger: CAACCTCCACGGCTCACTCAAGGCCCTCTCGGGCCACCATGCTTTTGCATATGCTGTCCCTGGTCCCGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577265.5 ENST00000639218.1 |
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| CDS TCA 72 bp | CAGCATATGCAAAAGCATGGTGGCCCGAGAGGGCCTTaGGTGAGCCGTGGAGGTTGCATGAGCTTCGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: QHMQKHGGPRGP*VSRGGCMSFVG Trigger: ACCCACGAAGCTCATGCAACCTCCACGGCTCACTCAAGGCCCTCTCGGGCCACCATGCTTTTGCATATGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577265.5 ENST00000639218.1 |
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| CDS CAA 72 bp | ACAGCATATGCAAAAGCATGGTGGCCCGAGAGGGCCTaGAGTGAGCCGTGGAGGTTGCATGAGCTTCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: TAYAKAWWPERA*SEPWRLHELRG Trigger: CCCACGAAGCTCATGCAACCTCCACGGCTCACTCAAGGCCCTCTCGGGCCACCATGCTTTTGCATATGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577265.5 ENST00000639218.1 |
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| CDS CCA 72 bp | CCAAGCTTGCCCGGGTGGAAGGGATCAAATCCAAAATaGCAGCCAATTCTGTCTGACTGTATCCAGCACACT | + |
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Preference number: 6 (lower is better) Translates to: PSLPGWKGSNPK*QPILSDCIQHT Trigger: AGTGTGCTGGATACAGTCAGACAGAATTGGCTGCCATTTTGGATTTGATCCCTTCCACCCGGGCAAGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS TCA 72 bp | CACATTCCACATTCATCCATTCTTCGAGTCCCTAAGTaGGTGCCAGGCACTGTGCAAATGAACGACCCACAG | + |
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Preference number: 6 (lower is better) Translates to: HIPHSSILRVPK*VPGTVQMNDPQ Trigger: CTGTGGGTCGTTCATTTGCACAGTGCCTGGCACTCACTTAGGGACTCGAAGAATGGATGAATGTGGAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS GCA 72 bp | GTGACAGGGACAGACACGCAAACAGTTACAATGGGGTaGTGTGAACTGGCATGGCACAGATATGTACAGACT | + |
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Preference number: 6 (lower is better) Translates to: VTGTDTQTVTMG*CELAWHRYVQT Trigger: AGTCTGTACATATCTGTGCCATGCCAGTTCACAGCACCCCATTGTAACTGTTTGCGTGTCTGTCCCTGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS GCA 72 bp | CTACTTATAAGTGAGAACTTGCGGTGTTTGGTTTTCTaGTCCTGCAACGGCTTCCAGCTCCATCCATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLISENLRCLVF*SCNGFQLHPCS Trigger: GGAACATGGATGGAGCTGGAAGCCGTTGCAGGAGCAGAAAACCAAACACCGCAAGTTCTCACTTATAAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578563.1 ENST00000638896.1 |
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| CDS CAA 72 bp | GTTCAGCTCCTACTTATAAGTGAGAACTTGCGGTGTTaGGTTTTCTGCTCCTGCAACGGCTTCCAGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VQLLLISENLRC*VFCSCNGFQLH Trigger: ATGGAGCTGGAAGCCGTTGCAGGAGCAGAAAACCAAACACCGCAAGTTCTCACTTATAAGTAGGAGCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578563.1 ENST00000638896.1 |
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| CDS TCA 72 bp | GAAGGGATCAAATCCAAAATGGCAGCCAATTCTGTCTaGCTGTATCCAGCACACTTTCTGTCATCCCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: EGIKSKMAANSV*LYPAHFLSSLG Trigger: CCCTAGGGATGACAGAAAGTGTGCTGGATACAGTCAGACAGAATTGGCTGCCATTTTGGATTTGATCCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577265.5 ENST00000584127.1 ENST00000638447.1 ENST00000639218.1 |
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| CDS CAA 72 bp | GTTCTCATCGTTCAGCTCCTACTTATAAGTGAGAACTaGCGGTGTTTGGTTTTCTGCTCCTGCAACGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: VLIVQLLLISEN*RCLVFCSCNGF Trigger: GAAGCCGTTGCAGGAGCAGAAAACCAAACACCGCAAGTTCTCACTTATAAGTAGGAGCTGAACGATGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578563.1 ENST00000638896.1 |
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