Pregenerated sensors for LGALS9B (Homo sapiens)
Ensembl gene IDs: ENSG00000170298Ensembl transcript IDs: ENST00000584703.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CGACCAGGCCCCAGTGTGTGTTGTTTCCCCACTTGTGTCCATGTGTTCTCATCGTCCATCCATGTTCCTTaGAATCTGAGCTCTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGPSVCCFPTCVHVFSSSIHVP*NLSSAP Trigger: TGGTGCAGAGCTCAGATTTCAAGGAACATGGATGGA...CGATGAGAACACATGGACACAAGTGGGGAAACAACACACACTGGGGCCTGGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS-3UTR CCA 90 bp | CGACCAGGCCCCAGTGTGTGTTGTTTCCCCACTTGTGTCCATGTGTTCTCATCGAGAACTTGCGGTGTTTaGTTTTCTGCTCCTGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: RPGPSVCCFPTCVHVFSSRTCGV*FSAPAT Trigger: CGTTGCAGGAGCAGAAAACCAAACACCGCAAGTTCT...CGATGAGAACACATGGACACAAGTGGGGAAACAACACACACTGGGGCCTGGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS-3UTR TCA 90 bp | TCACCTTGGTATCAAGCCCAGCATCCATTAGCTAATCTTCCTGATGCTCTCCGTGCTCCTACTTATAAGTaGGAACTTGCGGTGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPWYQAQHPLANLPDALRAPTYK*ELAVFG Trigger: ACCAAACACCGCAAGTTCTCACTTATAAGTAGGAGC...ACGGAGAGCATCAGGAAGATTAGCTAATGGATGCTGGGCTTGATACCAAGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS-3UTR CAA 90 bp | GCCCAGCATCCATTAGCTAATCTTCCTGATGCTCTCCGTCCCCGACCAGGCCCCGAGAACTTGCGGTGTTaGGTTTTCTGCTCCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AQHPLANLPDALRPRPGPENLRC*VFCSCN Trigger: GTTGCAGGAGCAGAAAACCAAACACCGCAAGTTCTC...GGGGCCTGGTCGGGGACGGAGAGCATCAGGAAGATTAGCTAATGGATGCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS-3UTR CAA 90 bp | TGGTATCAAGCCCAGCATCCATTAGCTAATCTTCCTGATGCTCTCCGTCCCCGAAGGCCCCAGTGTGTGTaGTTTCCCCACTTGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WYQAQHPLANLPDALRPRRPQCV*FPHLCP Trigger: TGGACACAAGTGGGGAAACAACACACACTGGGGCCT...TCGGGGACGGAGAGCATCAGGAAGATTAGCTAATGGATGCTGGGCTTGATACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS-3UTR CAA 90 bp | TCACCTTGGTATCAAGCCCAGCATCCATTAGCTAATCTTCCTGATGCTCTCCGTCTCCATCCATGTTCCTaGAAATCTGAGCTCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SPWYQAQHPLANLPDALRLHPCS*KSELCT Trigger: GGTGCAGAGCTCAGATTTCAAGGAACATGGATGGAG...ACGGAGAGCATCAGGAAGATTAGCTAATGGATGCTGGGCTTGATACCAAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS TCA 90 bp | CCACTTGTGTCCATGTGTTCTCATCGTTCAGCTCCTACTTATAAGTaGGAACTTGCGGTGTTTGGTTTTCTGCTCCTGCAACGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLVSMCSHRSAPTYK*ELAVFGFLLLQRLP Trigger: TGGAAGCCGTTGCAGGAGCAGAAAACCAAACACCGCAAGTTCTCACTTATAAGTAGGAGCTGAACGATGAGAACACATGGACACAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS GCA 90 bp | CTCCTACTTATAAGTGAGAACTTGCGGTGTTTGGTTTTCTGCTCCTaGAACGGCTTCCAGCTCCATCCATGTTCCTTGAAATCTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLISENLRCLVFCS*NGFQLHPCSLKSEL Trigger: GAGCTCAGATTTCAAGGAACATGGATGGAGCTGGAAGCCGTTGCAGGAGCAGAAAACCAAACACCGCAAGTTCTCACTTATAAGTAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS-3UTR CAA 90 bp | TATCAAGCCCAGCATCCATTAGCTAATCTTCCTGATGCTCTCCGTCCCCGACCACTTATAAGTGAGAACTaGCGGTGTTTGGTTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YQAQHPLANLPDALRPRPLISEN*RCLVFC Trigger: GCAGAAAACCAAACACCGCAAGTTCTCACTTATAAG...TGGTCGGGGACGGAGAGCATCAGGAAGATTAGCTAATGGATGCTGGGCTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS-3UTR CAA 90 bp | TCACCTTGGTATCAAGCCCAGCATCCATTAGCTAATCTTCCTGATGCTCTCCGTGTGTTGTTTCCCCACTaGTGTCCATGTGTTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SPWYQAQHPLANLPDALRVLFPH*CPCVLI Trigger: GATGAGAACACATGGACACAAGTGGGGAAACAACAC...ACGGAGAGCATCAGGAAGATTAGCTAATGGATGCTGGGCTTGATACCAAGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS CAA 90 bp | TGTCCATGTGTTCTCATCGTTCAGCTCCTACTTATAAGTGAGAACTaGCGGTGTTTGGTTTTCTGCTCCTGCAACGGCTTCCAGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CPCVLIVQLLLISEN*RCLVFCSCNGFQLH Trigger: ATGGAGCTGGAAGCCGTTGCAGGAGCAGAAAACCAAACACCGCAAGTTCTCACTTATAAGTAGGAGCTGAACGATGAGAACACATGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||
| CDS TCA 72 bp | TCCATGTGTTCTCATCGTTCAGCTCCTACTTATAAGTaGGAACTTGCGGTGTTTGGTTTTCTGCTCCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SMCSHRSAPTYK*ELAVFGFLLLQ Trigger: TTGCAGGAGCAGAAAACCAAACACCGCAAGTTCTCACTTATAAGTAGGAGCTGAACGATGAGAACACATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584703.1 |
||