Pregenerated sensors for LGALS9 (Homo sapiens)
Ensembl gene IDs: ENSG00000168961Ensembl transcript IDs: ENST00000302228.9, ENST00000481514.5, ENST00000486774.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGCAGAGGGTGCTTCCGGGACCAGGGACAGCATATGCAAAAGCATaGTGGCCCAAGAGGGCCTTGAGTGAGCTGCAGAGGCTGCGTGAG | + |
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Preference number: 5 (lower is better) Translates to: WQRVLPGPGTAYAKA*WPKRALSELQRLRE Trigger: CTCACGCAGCCTCTGCAGCTCACTCAAGGCCCTCTTGGGCCACCATGCTTTTGCATATGCTGTCCCTGGTCCCGGAAGCACCCTCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481514.5 |
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| CDS GCA 90 bp | ATGGAAGGGCAATTAGGCATGTGCTCGAGGCAGGCTGGCAGAGGGTaGTTCCGGGACCAGGGACAGCATATGCAAAAGCATGGTGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: MEGQLGMCSRQAGRG*FRDQGQHMQKHGGP Trigger: TGGGCCACCATGCTTTTGCATATGCTGTCCCTGGTCCCGGAAGCACCCTCTGCCAGCCTGCCTCGAGCACATGCCTAATTGCCCTTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS TCA 90 bp | GCCAAGGTGGAAGGGATCAAATCCAAAGTGGCAGCCAGTTCTGTCTaGCTGTATCCAGCACACTTTCTATCCTCCCCAGAGCCAGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: AKVEGIKSKVAASSV*LYPAHFLSSPEPGP Trigger: TGGCCCTGGCTCTGGGGAGGATAGAAAGTGTGCTGGATACAGTCAGACAGAACTGGCTGCCACTTTGGATTTGATCCCTTCCACCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS GCA 90 bp | AGTGAGGCAACGAGGCTCAGAAAGATTAAGCAACTTGCCCAAGCTTaGCAAGGTGGAAGGGATCAAATCCAAAGTGGCAGCCAGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SEATRLRKIKQLAQA*QGGRDQIQSGSQFC Trigger: ACAGAACTGGCTGCCACTTTGGATTTGATCCCTTCCACCTTGGCAAGCTTGGGCAAGTTGCTTAATCTTTCTGAGCCTCGTTGCCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS CCA 90 bp | GCAACTTGCCCAAGCTTGCCAAGGTGGAAGGGATCAAATCCAAAGTaGCAGCCAGTTCTGTCTGACTGTATCCAGCACACTTTCTATCCT | + |
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Preference number: 5 (lower is better) Translates to: ATCPSLPRWKGSNPK*QPVLSDCIQHTFYP Trigger: AGGATAGAAAGTGTGCTGGATACAGTCAGACAGAACTGGCTGCCACTTTGGATTTGATCCCTTCCACCTTGGCAAGCTTGGGCAAGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS GCA 90 bp | ACAATTTCATCACGGCACATCATTTGTAGGCAATCACAAATTGATTaGGATACGCAACAACTGGAACTCTCATTCACAGCAGACTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: TISSRHIICRQSQID*DTQQLELSFTADWS Trigger: ACTCCAGTCTGCTGTGAATGAGAGTTCCAGTTGTTGCGTATCGCAATCAATTTGTGATTGCCTACAAATGATGTGCCGTGATGAAATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302228.9 |
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| CDS CCA 72 bp | CTTCCGGGACCAGGGACAGCATATGCAAAAGCATGGTaGCCCAAGAGGGCCTTGAGTGAGCTGCAGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LPGPGTAYAKAW*PKRALSELQRL Trigger: CAGCCTCTGCAGCTCACTCAAGGCCCTCTTGGGCCACCATGCTTTTGCATATGCTGTCCCTGGTCCCGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481514.5 |
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| CDS CCA 72 bp | GTGCTTCCGGGACCAGGGACAGCATATGCAAAAGCATaGTGGCCCAAGAGGGCCTTGAGTGAGCTGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VLPGPGTAYAKA*WPKRALSELQR Trigger: CCTCTGCAGCTCACTCAAGGCCCTCTTGGGCCACCATGCTTTTGCATATGCTGTCCCTGGTCCCGGAAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481514.5 |
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| CDS CCA 72 bp | CATGGAAGGGCAATTAGGCATGTGCTCGAGGCAGGCTaGCAGAGGGTGCTTCCGGGACCAGGGACAGCATAT | + |
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Preference number: 6 (lower is better) Translates to: HGRAIRHVLEAG*QRVLPGPGTAY Trigger: ATATGCTGTCCCTGGTCCCGGAAGCACCCTCTGCCAGCCTGCCTCGAGCACATGCCTAATTGCCCTTCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS CCA 72 bp | CCAAGCTTGCCAAGGTGGAAGGGATCAAATCCAAAGTaGCAGCCAGTTCTGTCTGACTGTATCCAGCACACT | + |
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Preference number: 6 (lower is better) Translates to: PSLPRWKGSNPK*QPVLSDCIQHT Trigger: AGTGTGCTGGATACAGTCAGACAGAACTGGCTGCCACTTTGGATTTGATCCCTTCCACCTTGGCAAGCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS TCA 72 bp | GAAGGGATCAAATCCAAAGTGGCAGCCAGTTCTGTCTaGCTGTATCCAGCACACTTTCTATCCTCCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: EGIKSKVAASSV*LYPAHFLSSPE Trigger: CTCTGGGGAGGATAGAAAGTGTGCTGGATACAGTCAGACAGAACTGGCTGCCACTTTGGATTTGATCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS CCA 72 bp | GCAAATACAGTTACAATGGGGTGCTGTGAACTGGCATaGCACAGATACATACAGACTCTGTGGGGACACCAG | + |
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Preference number: 6 (lower is better) Translates to: ANTVTMGCCELA*HRYIQTLWGHQ Trigger: CTGGTGTCCCCACAGAGTCTGTATGTATCTGTGCCATGCCAGTTCACAGCACCCCATTGTAACTGTATTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS CCA 72 bp | GACACGCAAATACAGTTACAATGGGGTGCTGTGAACTaGCATGGCACAGATACATACAGACTCTGTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: DTQIQLQWGAVN*HGTDTYRLCGD Trigger: GTCCCCACAGAGTCTGTATGTATCTGTGCCATGCCAGTTCACAGCACCCCATTGTAACTGTATTTGCGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS CAA 72 bp | CTAGTGAGGCAACGAGGCTCAGAAAGATTAAGCAACTaGCCCAAGCTTGCCAAGGTGGAAGGGATCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: LVRQRGSERLSN*PKLAKVEGIKS Trigger: GGATTTGATCCCTTCCACCTTGGCAAGCTTGGGCAAGTTGCTTAATCTTTCTGAGCCTCGTTGCCTCACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS GCA 72 bp | AACGGGGACAGACACGCAAATACAGTTACAATGGGGTaGTGTGAACTGGCATGGCACAGATACATACAGACT | + |
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Preference number: 6 (lower is better) Translates to: NGDRHANTVTMG*CELAWHRYIQT Trigger: AGTCTGTATGTATCTGTGCCATGCCAGTTCACAGCACCCCATTGTAACTGTATTTGCGTGTCTGTCCCCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481514.5 ENST00000486774.1 |
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| CDS CAA 72 bp | CTTCAGCCCAGGAGCTTGAGACCAGCTCGGGAAAGGTaGGAAGACCCTGTCCCTACATATAATTTAACAAAC | + |
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Preference number: 6 (lower is better) Translates to: LQPRSLRPARER*EDPVPTYNLTN Trigger: GTTTGTTAAATTATATGTAGGGACAGGGTCTTCCAACCTTTCCCGAGCTGGTCTCAAGCTCCTGGGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302228.9 |
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| CDS CAA 90 bp | CAGGGACAATTTCATCACGGCACATCATTTGTAGGCAATCACAAATaGATTGCGATACGCAACAACTGGAACTCTCATTCACAGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: QGQFHHGTSFVGNHK*IAIRNNWNSHSQQT Trigger: AGTCTGCTGTGAATGAGAGTTCCAGTTGTTGCGTATCGCAATCAATTTGTGATTGCCTACAAATGATGTGCCGTGATGAAATTGTCCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302228.9 |
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| CDS GCA 72 bp | TCACGGCACATCATTTGTAGGCAATCACAAATTGATTaGGATACGCAACAACTGGAACTCTCATTCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRHIICRQSQID*DTQQLELSFTA Trigger: TGCTGTGAATGAGAGTTCCAGTTGTTGCGTATCGCAATCAATTTGTGATTGCCTACAAATGATGTGCCGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302228.9 |
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| CDS CAA 72 bp | TTTCATCACGGCACATCATTTGTAGGCAATCACAAATaGATTGCGATACGCAACAACTGGAACTCTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: FHHGTSFVGNHK*IAIRNNWNSHS Trigger: TGAATGAGAGTTCCAGTTGTTGCGTATCGCAATCAATTTGTGATTGCCTACAAATGATGTGCCGTGATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302228.9 |
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