RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LGALS8 (Homo sapiens)

Ensembl gene IDs: ENSG00000116977

Ensembl transcript IDs: ENST00000238181.11, ENST00000323938.10, ENST00000341872.10, ENST00000352231.6, ENST00000366583.6, ENST00000366584.9, ENST00000406509.7, ENST00000416919.6, ENST00000430527.6, ENST00000434231.6, ENST00000442397.6, ENST00000450372.6, ENST00000454943.6, ENST00000475670.2, ENST00000481485.5, ENST00000489586.6, ENST00000525042.1, ENST00000525789.1, ENST00000526589.5, ENST00000526634.5, ENST00000526652.1, ENST00000527974.5, ENST00000528259.5, ENST00000528782.5, ENST00000529489.5, ENST00000529796.1, ENST00000532640.1, ENST00000532826.5

Found 1027 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATaGAGGCGGAAGGAGCGGTGTGGAGGGAGGCGGTCCGTGGCGCCT +
Preference number: 1 (lower is better)
Translates to: WGFLFSFQCKPVGKE*RRKERCGGRRSVAP
Trigger: AGGCGCCACGGACCGCCTCCCTCCACACCGCTCCTTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 90 bp GCTGTGGGTGAGGAGACCTGCCAGAGGTGGCTGGAGGCACTTTATTaGCAGCCTGGCGGGCTGGCGAGCGCCAATGAAGTAAAATCTGGT +
Preference number: 1 (lower is better)
Translates to: AVGEETCQRWLEALY*QPGGLASANEVKSG
Trigger: ACCAGATTTTACTTCATTGGCGCTCGCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAGCCACCTCTGGCAGGTCTCCTCACCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 90 bp CAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACTGGGTaGCACGAGGAAGCTCCTCCAGGATTCAGAATGAACCCAGTTCCA +
Preference number: 1 (lower is better)
Translates to: QLTPGCSHRGPRNTG*HEEAPPGFRMNPVP
Trigger: TGGAACTGGGTTCATTCTGAATCCTGGAGGAGCTTCCTCGTGCCACCCAGTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 90 bp AAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACTaGGTGGCACGAGGAAGCTCCTCCAGGATTCAGAATGAACCCAGT +
Preference number: 1 (lower is better)
Translates to: KTAHTWLLTQRAQKH*VARGSSSRIQNEPS
Trigger: ACTGGGTTCATTCTGAATCCTGGAGGAGCTTCCTCGTGCCACCCAGTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 90 bp AGTTTGAGTTTTGGGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTaGGCAAGGAATGAAGGCGGAAGGAGCGGTGTGGAGGGAGGCGGT +
Preference number: 1 (lower is better)
Translates to: SLSFGDSYSASSASL*ARNEGGRSGVEGGG
Trigger: ACCGCCTCCCTCCACACCGCTCCTTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCCCAAAACTCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 90 bp AGTAGGAGAGAGGGCAGAGTGGCTTTAACTGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCAT +
Preference number: 1 (lower is better)
Translates to: SRREGRVALTGYKCC*PQFPHSVLDTTILH
Trigger: ATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGTTAAAGCCACTCTGCCCTCTCTCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR GCA 90 bp CAAAGTAGGAGAGAGGGCAGAGTGGCTTTAACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCATACTT +
Preference number: 1 (lower is better)
Translates to: QSRREGRVALTGYKC*CPQFPHSVLDTTIL
Trigger: AAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGTTAAAGCCACTCTGCCCTCTCTCCTACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR TCA 90 bp GTGACTGTCACCTTTATCCTTTGTTCTTTTGGGAAACGGGAGAGATaGAGGCAACACGCTGCTTCTAAAACAGCTCACACCTGGCTGCTC +
Preference number: 1 (lower is better)
Translates to: VTVTFILCSFGKRER*RQHAASKTAHTWLL
Trigger: GAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGCGTGTTGCCTTCATCTCTCCCGTTTCCCAAAAGAACAAAGGATAAAGGTGACAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR TCA 90 bp TTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTaGGAACACCCAGCAGGACCTAATGGTGCACAAGCTCATTTTAAC +
Preference number: 1 (lower is better)
Translates to: FPHSVLDTTILHGKD*EHPAGPNGAQAHFN
Trigger: GTTAAAATGAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR TCA 90 bp CCAGAAACACTGGGTGGCACGAGGAAGCTCCTCCAGGATTCAGAATaGACCCAGTTCCATTGGTGGTTAACTAAGAACTACTTGTCTAAG +
Preference number: 1 (lower is better)
Translates to: PETLGGTRKLLQDSE*TQFHWWLTKNYLSK
Trigger: CTTAGACAAGTAGTTCTTAGTTAACCACCAATGGAACTGGGTTCATTCTGAATCCTGGAGGAGCTTCCTCGTGCCACCCAGTGTTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR TCA 90 bp ATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTaGTTTGCCCTAAGTTCAAATACACAGAAATCAGCTGCCTTGGGC +
Preference number: 1 (lower is better)
Translates to: ILPLPETFCRRLCRL*FALSSNTQKSAALG
Trigger: GCCCAAGGCAGCTGATTTCTGTGTATTTGAACTTAGGGCAAATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR TCA 90 bp TTGGGTGGAGGGAGCAAGTTGCGAAGTGACCACCTCCTGATCATTTaGGAGTCCGTTTACAGTGTAATCTTCACGATCTTTTCTTTTGTG +
Preference number: 1 (lower is better)
Translates to: LGGGSKLRSDHLLII*ESVYSVIFTIFSFV
Trigger: CACAAAAGAAAAGATCGTGAAGATTACACTGTAAACGGACTCTCAAATGATCAGGAGGTGGTCACTTCGCAACTTGCTCCCTCCACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 90 bp TTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTaGCTATCGTATAGAGCTGCAGAAAGAGTAAATGATACACGGTAT +
Preference number: 1 (lower is better)
Translates to: FTKSPPGLCCHISLS*LSYRAAERVNDTRY
Trigger: ATACCGTGTATCATTTACTCTTTCTGCAGCTCTATACGATAGGCAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 90 bp AGATTTCAGTTATTTGACAAAGATCACAAGCTAGTGAGTGTGACATaGGGAGCTGTGACAGTTCTGGAACATAGAGTCTTAGGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: RFQLFDKDHKLVSVT*GAVTVLEHRVLGPG
Trigger: TCCTGGGCCTAAGACTCTATGTTCCAGAACTGTCACAGCTCCCCATGTCACACTCACTAGCTTGTGATCTTTGTCAAATAACTGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 90 bp GTGAATATTCACTTTGCCATAAATGCCCAGAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATAGAGCAGAGTATGTTTTCCATTTAC +
Preference number: 1 (lower is better)
Translates to: VNIHFAINAQSVYFL*ADPVAIEQSMFSIY
Trigger: GTAAATGGAAAACATACTCTGCTCTATGGCCACAGGATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCAAAGTGAATATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
3UTR TCA 90 bp CTTTCAGGTTCGATTTGCTGCTTTGATTACTGTGTTAGCACTGGCTaGAAAACTAAAGGAGAATTATATTGTCTTGCTACCAGAATCCAT +
Preference number: 1 (lower is better)
Translates to: LSGSICCFDYCVSTG*KTKGELYCLATRIH
Trigger: ATGGATTCTGGTAGCAAGACAATATAATTCTCCTTTAGTTTTTCAGCCAGTGCTAACACAGTAATCAAAGCAGCAAATCGAACCTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 90 bp CAGCTCCAGTCTCAAATACAGGCAGGCTCGAGCTCCTGTTTTGAGTaGGGTGGAGGGAGCAAGTTGCGAAGTGACCACCTCCTGATCATT +
Preference number: 2 (lower is better)
Translates to: QLQSQIQAGSSSCFE*GGGSKLRSDHLLII
Trigger: AATGATCAGGAGGTGGTCACTTCGCAACTTGCTCCCTCCACCCAACTCAAAACAGGAGCTCGAGCCTGCCTGTATTTGAGACTGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAACTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 2 (lower is better)
Translates to: GILIQLPVQACGQGMKAELHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCCTACAGCTTTCCCTGTaGCACCCTCCACCCCCAACC +
Preference number: 2 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSLQLSL*HPPPPT
Trigger: GGTTGGGGGTGGAGGGTGCCACAGGGAAAGCTGTAG...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGCTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 2 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLLHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGAAAACAGCTCACACCTaGCTGCTCACACAGAGGGCC +
Preference number: 2 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLKTAHT*LLTQRA
Trigger: GGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTT...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 2 (lower is better)
Translates to: GILIQLPVQACGQGMKAEGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAGTTGAATGGCATTCTTaGAGAGTCAGCCAAAGTAGG +
Preference number: 2 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGVEWHS*RVSQSR
Trigger: CCTACTTTGGCTGACTCTTCAAGAATGCCATTCAAC...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR TCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGTTGAATGGCATTCTTaGAGAGTCAGCCAAAGTAGG +
Preference number: 2 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWVEWHS*RVSQSR
Trigger: CCTACTTTGGCTGACTCTTCAAGAATGCCATTCAAC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR TCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACAGTGGAAGAGTGCTTTaGTCTCAGTTGCTAATGATG +
Preference number: 2 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHSGRVL*SQLLMM
Trigger: CATCATTAGCAACTGAGATCAAAGCACTCTTCCACT...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAAGTACTGGGTCATGGTaGAGTTGGAAAGTGAGGGTT +
Preference number: 2 (lower is better)
Translates to: GILIQLPVQACGQGMKAESTGSW*SWKVRV
Trigger: AACCCTCACTTTCCAACTTCACCATGACCCAGTACT...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAATTTAGCACCCAAAGCTaGCGCCTCATTTGCACTGTA +
Preference number: 2 (lower is better)
Translates to: GILIQLPVQACGQGMKAEFSTQS*RLICTV
Trigger: TACAGTGCAAATGAGGCGTCAGCTTTGGGTGCTAAA...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: PKDYSATGNCPGRATPELTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCAACATCAGTCCTCAGTaGTGGGATACGGTAGAGCAC +
Preference number: 2 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSNISPQ*WDTVEH
Trigger: GTGCTCTACCGTATCCCATCACTGAGGACTGATGTT...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACTCCTGTAACAAGATCTaGCCTGTAAAGATCCCATAT +
Preference number: 2 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHSCNKI*PVKIPY
Trigger: ATATGGGATCTTTACAGGTCAGATCTTGTTACAGGA...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGTTTAGCACCCAAAGCTaGCGCCTCATTTGCACTGTA +
Preference number: 2 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLFSTQS*RLICTV
Trigger: TACAGTGCAAATGAGGCGTCAGCTTTGGGTGCTAAA...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp TTTTCTCTGGGCCGATCCTGTGGCCATAGAGCAGAGTATGTTTTCCATTTACAGAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: FSLGRSCGHRAEYVFHLQKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...CTGTAAATGGAAAACATACTCTGCTCTATGGCCACAGGATCGGCCCAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434231.6
3UTR-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAATATGACAGTGATCACTaGGGAAGGAGTTGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GILIQLPVQACGQGMKAEYDSDH*GRSCVF
Trigger: GAAGACACAACTCCTTCCCCAGTGATCACTGTCATA...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp TCACTTTGCCATAAATGCCCAGAGTGTCTATTTTCTCTGGGCCGATCCTGTGGCCCATTTACAGCCACCTaGAATTTGTCCTTCAGCACC +
Preference number: 2 (lower is better)
Translates to: SLCHKCPECLFSLGRSCGPFTAT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTGGCTGTAAATGG...GCCACAGGATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434231.6
3UTR-3UTR TCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 2 (lower is better)
Translates to: KENDVSQHQSSVMGYGRALHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR TCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAATGCCTTATGAATGCCTaGAGTCTAATCCTGACCTTA +
Preference number: 2 (lower is better)
Translates to: GILIQLPVQACGQGMKAECLMNA*SLILTL
Trigger: TAAGGTCAGGATTAGACTTCAGGCATTCATAAGGCA...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 2 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 2 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR GCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR GCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAATTCTCGAGTCTTCTTaGCTTCTACAGCTTTCCCTG +
Preference number: 2 (lower is better)
Translates to: PKDYSATGNCPGRATPELILESS*LLQLSL
Trigger: CAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAAT...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGTATGACAGTGATCACTaGGGAAGGAGTTGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLYDSDH*GRSCVF
Trigger: GAAGACACAACTCCTTCCCCAGTGATCACTGTCATA...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAAATATTCCTAAATCCTaGCAGAGTTCTGCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: PKDYSATGNCPGRATPELNIPKS*QSSAPV
Trigger: GACTGGGGCAGAACTCTGCCAGGATTTAGGAATATT...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTCTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 2 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISLHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR TCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGCTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 2 (lower is better)
Translates to: IFQIECILPLPETFCRRLLHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCATTCTCGAGTCTTCTTaGCTTCTACAGCTTTCCCTG +
Preference number: 2 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSILESS*LLQLSL
Trigger: CAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAAT...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTCCACCTGGCTTGTGCTaGCACATAAGCCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIPPGLC*HISLSC
Trigger: GCAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGG...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAACCATGTTACTTTTGGTaGCTTAATACACCTACTTGG +
Preference number: 2 (lower is better)
Translates to: GILIQLPVQACGQGMKAEPCYFW*LNTPTW
Trigger: CCAAGTAGGTGTATTAAGGCACCAAAAGTAACATGG...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGTGGGTCCCTTAGTTaGCGTACACTTTCTGATAGT +
Preference number: 2 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSCGSLS*RTLSDS
Trigger: ACTATCAGAAAGTGTACGCCAACTAAGGGACCCACA...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCAACATCAGTCCTCAGTaGTGGGATACGGTAGAGCAC +
Preference number: 2 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSNISPQ*WDTVEH
Trigger: GTGCTCTACCGTATCCCATCACTGAGGACTGATGTT...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGTCCTGTAACAAGATCTaGCCTGTAAAGATCCCATAT +
Preference number: 2 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLSCNKI*PVKIPY
Trigger: ATATGGGATCTTTACAGGTCAGATCTTGTTACAGGA...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp AGACTTTGGAACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGAAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: RLWNLEFVLQHHNHDLKRKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...TCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTTCCAAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442397.6
3UTR-3UTR GCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 2 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: KENDVSQHQSSVMGYGRATGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR GCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCTCCCCACCTGGCTTGTaGTGCCACATAAGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPSPPGL*CHISLS
Trigger: GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGA...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAGAAGTAGAACATCAGTaGCAAAAGACTATTCAGCAA +
Preference number: 2 (lower is better)
Translates to: GILIQLPVQACGQGMKAEEVEHQ*QKTIQQ
Trigger: TTGCTGAATAGTCTTTTGGCACTGATGTTCTACTTC...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTGCATTACCTCTGCCTaGTTTGTGGGTCCCTTAGTT +
Preference number: 2 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFCITSA*FVGPLV
Trigger: AACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCA...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp CTTTGGAACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 2 (lower is better)
Translates to: LWNLEFVLQHHNHDLKRLKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...AAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTTCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442397.6
3UTR-3UTR GCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGATCTTTCAAATTGAATaGATCTTGCCTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLIFQIE*ILPLPE
Trigger: TTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTATGACAGTGATCACTaGGGAAGGAGTTGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFYDSDH*GRSCVF
Trigger: GAAGACACAACTCCTTCCCCAGTGATCACTGTCATA...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 90 bp GCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTaGTTTCACCAAGTATATATCCTAGCTCTTCACAGTTTTACCAAA +
Preference number: 2 (lower is better)
Translates to: AHRRVEAQENREHTG*FHQVYILALHSFTK
Trigger: TTTGGTAAAACTGTGAAGAGCTAGGATATATACTTGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR TCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: IFQIECILPLPETFCRRLGPLRS*CNACRK
Trigger: TTTTCTACAGGCATTACATCAACTCCTAAGGGGTCC...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTGPLRS*CNACRK
Trigger: TTTTCTACAGGCATTACATCAACTCCTAAGGGGTCC...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCAACATCAGTCCTCAGTaGTGGGATACGGTAGAGCAC +
Preference number: 2 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPNISPQ*WDTVEH
Trigger: GTGCTCTACCGTATCCCATCACTGAGGACTGATGTT...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 2 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCATCTTTCAAATTGAATaGATCTTGCCTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSIFQIE*ILPLPE
Trigger: TTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTTGCCTGCCTTATGAATaGCTGAAGTCTAATCCTGAC +
Preference number: 2 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTCLPYE*LKSNPD
Trigger: GTCAGGATTAGACTTCAGGCATTCATAAGGCAGGCA...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTCACATAAGCCTCTCCTaGCTATCGTATAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIHISLS*LSYRAA
Trigger: TGCAGCTCTATACGATAGGCAGGAGAGGCTTATGTG...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTTGTGGGTCCCTTAGTTaGCGTACACTTTCTGATAGT +
Preference number: 2 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTCGSLS*RTLSDS
Trigger: ACTATCAGAAAGTGTACGCCAACTAAGGGACCCACA...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATGTTAGTGTCTTCGGGTaGTTTAATATCTGCATAACT +
Preference number: 2 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDVSVFG*FNICIT
Trigger: AGTTATGCAGATATTAAATCACCCGAAGACACTAAC...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTTGCCTGCCTTATGAATaGCTGAAGTCTAATCCTGAC +
Preference number: 2 (lower is better)
Translates to: LVATDVHSLLHVRCFTWICLPYE*LKSNPD
Trigger: GTCAGGATTAGACTTCAGGCATTCATAAGGCAGGCA...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGAGAAATCAGCTGCCTTaGGCTTGGCATCAAGTTAAT +
Preference number: 2 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQRNQLP*AWHQVN
Trigger: ATTAACTTGATGCCAAGCCCAAGGCAGCTGATTTCT...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTAAGATCCCATATACATaGAACTTCTGCCAACTCCCC +
Preference number: 2 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIKIPYT*NFCQLP
Trigger: GGGGAGTTGGCAGAAGTTCCATGTATATGGGATCTT...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTCGTCTGTGTAGACTCTaGTTTGCCCTAAGTTCAAAT +
Preference number: 2 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIRLCRL*FALSSN
Trigger: ATTTGAACTTAGGGCAAATCAGAGTCTACACAGACG...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTAGTGGAAGAGTGCTTTaGTCTCAGTTGCTAATGATG +
Preference number: 2 (lower is better)
Translates to: LVATDVHSLLHVRCFTWISGRVL*SQLLMM
Trigger: CATCATTAGCAACTGAGATCAAAGCACTCTTCCACT...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTGTGCTCAGATGTCATaGCAATTACTTGGTAAAGCT +
Preference number: 2 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQCAQMS*QLLGKA
Trigger: AGCTTTACCAAGTAATTGGCATGACATCTGAGCACA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 90 bp TCAGTTGCTAATGATGATGGACTAATCTTTAGAAGAACGGAGGCCTaGATTGGTGATTTCATGGGAACAAAACAGATTTCTGCATTACCT +
Preference number: 2 (lower is better)
Translates to: SVANDDGLIFRRTEA*IGDFMGTKQISALP
Trigger: AGGTAATGCAGAAATCTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAGTCCATCATCATTAGCAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTGTTAGTGTCTTCGGGTaGTTTAATATCTGCATAACT +
Preference number: 2 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTVSVFG*FNICIT
Trigger: AGTTATGCAGATATTAAATCACCCGAAGACACTAAC...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTAAGACTTACAAGGAATaGTGTGAGTGGGCTATTTTT +
Preference number: 2 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTKTYKE*CEWAIF
Trigger: AAAAATAGCCCACTCACATCATTCCTTGTAAGTCTT...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR TCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGATTTGGATATAACGTaGCTAGCAGTTGATCCAGTC +
Preference number: 2 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPDLDIT*LAVDPV
Trigger: GACTGGATCAACTGCTAGTCACGTTATATCCAAATC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTTGTGCTCAGATGTCATaGCAATTACTTGGTAAAGCT +
Preference number: 2 (lower is better)
Translates to: LVATDVHSLLHVRCFTWICAQMS*QLLGKA
Trigger: AGCTTTACCAAGTAATTGGCATGACATCTGAGCACA...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCATCTTTCAAATTGAATaGATCTTGCCTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFIFQIE*ILPLPE
Trigger: TTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTCCATGTTACTTTTGGTaGCTTAATACACCTACTTGG +
Preference number: 2 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIPCYFW*LNTPTW
Trigger: CCAAGTAGGTGTATTAAGGCACCAAAAGTAACATGG...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCAGAAATCAGCTGCCTTaGGCTTGGCATCAAGTTAAT +
Preference number: 2 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPRNQLP*AWHQVN
Trigger: ATTAACTTGATGCCAAGCCCAAGGCAGCTGATTTCT...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGATCTTTCAAATTGAATaGATCTTGCCTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQIFQIE*ILPLPE
Trigger: TTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCCGATCTTTTCTTTTGTaGTGGTTTGTGATCATACAA +
Preference number: 2 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPRSFLL*WFVIIQ
Trigger: TTGTATGATCACAAACCACCACAAAAGAAAAGATCG...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp CAGTCAGGGGCTGTGGGTGAGGAGACCTGCCAGAGGTaGCTGGAGGCACTTTATTGCCAGCCTGGCGGGCTG +
Preference number: 3 (lower is better)
Translates to: QSGAVGEETCQR*LEALYCQPGGL
Trigger: CAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAGCCACCTCTGGCAGGTCTCCTCACCCACAGCCCCTGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 72 bp GAGGAGACCTGCCAGAGGTGGCTGGAGGCACTTTATTaGCAGCCTGGCGGGCTGGCGAGCGCCAATGAAGTA +
Preference number: 3 (lower is better)
Translates to: EETCQRWLEALY*QPGGLASANEV
Trigger: TACTTCATTGGCGCTCGCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAGCCACCTCTGGCAGGTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp CCTGGCTGCTCACACAGAGGGCCCAGAAACACTGGGTaGCACGAGGAAGCTCCTCCAGGATTCAGAATGAAC +
Preference number: 3 (lower is better)
Translates to: PGCSHRGPRNTG*HEEAPPGFRMN
Trigger: GTTCATTCTGAATCCTGGAGGAGCTTCCTCGTGCCACCCAGTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp CACACCTGGCTGCTCACACAGAGGGCCCAGAAACACTaGGTGGCACGAGGAAGCTCCTCCAGGATTCAGAAT +
Preference number: 3 (lower is better)
Translates to: HTWLLTQRAQKH*VARGSSSRIQN
Trigger: ATTCTGAATCCTGGAGGAGCTTCCTCGTGCCACCCAGTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp CTCAAATACAGGCAGGCTCGAGCTCCTGTTTTGAGTTaGGTGGAGGGAGCAAGTTGCGAAGTGACCACCTCC +
Preference number: 3 (lower is better)
Translates to: LKYRQARAPVLS*VEGASCEVTTS
Trigger: GGAGGTGGTCACTTCGCAACTTGCTCCCTCCACCCAACTCAAAACAGGAGCTCGAGCCTGCCTGTATTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 72 bp GAGGGCAGAGTGGCTTTAACTGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCAGTGCTAGACACCACC +
Preference number: 3 (lower is better)
Translates to: EGRVALTGYKCC*PQFPHSVLDTT
Trigger: GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGTTAAAGCCACTCTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR CCA 72 bp TTTGGGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTaGGCAAGGAATGAAGGCGGAAGGAGCGGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: FGDSYSASSASL*ARNEGGRSGVE
Trigger: CTCCACACCGCTCCTTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 72 bp AGAGAGGGCAGAGTGGCTTTAACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCATTCAGTGCTAGACACC +
Preference number: 3 (lower is better)
Translates to: REGRVALTGYKC*CPQFPHSVLDT
Trigger: GGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGTTAAAGCCACTCTGCCCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR CAA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCAGAAGAACGGAGGCCTaGATTGGTGATTTCATGGGA +
Preference number: 3 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPRRTEA*IGDFMG
Trigger: TCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCT...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR TCA 72 bp TCAGTGCTAGACACCACCATACTTCATGGCAAGGACTaGGAACACCCAGCAGGACCTAATGGTGCACAAGCT +
Preference number: 3 (lower is better)
Translates to: SVLDTTILHGKD*EHPAGPNGAQA
Trigger: AGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR TCA 72 bp CTGGGTGGCACGAGGAAGCTCCTCCAGGATTCAGAATaGACCCAGTTCCATTGGTGGTTAACTAAGAACTAC +
Preference number: 3 (lower is better)
Translates to: LGGTRKLLQDSE*TQFHWWLTKNY
Trigger: GTAGTTCTTAGTTAACCACCAATGGAACTGGGTTCATTCTGAATCCTGGAGGAGCTTCCTCGTGCCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 72 bp TCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTaGCTATCGTATAGAGCTGCAGAAAGAGTAAATGAT +
Preference number: 3 (lower is better)
Translates to: SPPGLCCHISLS*LSYRAAERVND
Trigger: ATCATTTACTCTTTCTGCAGCTCTATACGATAGGCAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CAA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAAGCCTACTTTTCATTTaGGGTAGGCGAACTTCAGCC +
Preference number: 3 (lower is better)
Translates to: PKDYSATGNCPGRATPELSLLFI*GRRTSA
Trigger: GGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGCT...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp CTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTaGCGTACACTTTCTGATAGTGCCTGCCTTATGAAT +
Preference number: 3 (lower is better)
Translates to: LHYLCLLCGSLS*RTLSDSACLMN
Trigger: ATTCATAAGGCAGGCACTATCAGAAAGTGTACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp CCACATGAAATAACCCAGGCAAAAATACTCACAAGCTaGGGCGTGCCAGACTTTGGAACCTGGAATTTGTCC +
Preference number: 3 (lower is better)
Translates to: PHEITQAKILTS*GVPDFGTWNLS
Trigger: GGACAAATTCCAGGTTCCAAAGTCTGGCACGCCCCAGCTTGTGAGTATTTTTGCCTGGGTTATTTCATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442397.6
3UTR-3UTR CAA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR CAA 90 bp AGTGTCTATTTTCTCTGGGCCGATCCTGTGGCCATAGAGCAGAGTATGTTTTCCACAGCCACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 3 (lower is better)
Translates to: SVYFLWADPVAIEQSMFSTATWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT...GGAAAACATACTCTGCTCTATGGCCACAGGATCGGCCCAGAGAAAATAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
3UTR-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR CAA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: YFMARTENTQQDLMVHKLKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR TCA 72 bp ATCTGCATAACTAATCCCAGAGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAAAGCAGTGCGCAGCAG +
Preference number: 3 (lower is better)
Translates to: ICITNPRGPLRS*CNACRKSSAQQ
Trigger: CTGCTGCGCACTGCTTTTTCTACAGGCATTACATCAACTCCTAAGGGGTCCTCTGGGATTAGTTATGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR GCA 72 bp CATGGGAACAAAACAGATTTCTGCATTACCTCTGCCTaGTTTGTGGGTCCCTTAGTTGGCGTACACTTTCTG +
Preference number: 3 (lower is better)
Translates to: HGNKTDFCITSA*FVGPLVGVHFL
Trigger: CAGAAAGTGTACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTGTTCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 72 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTaGCACATAAGCCTCTCCTGCCTATCGTATAGAGCT +
Preference number: 3 (lower is better)
Translates to: YHFFTKSPPGLC*HISLSCLSYRA
Trigger: AGCTCTATACGATAGGCAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp CACTTTGCCATAAATGCCCAGAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATAGAGCAGAGTATGTTT +
Preference number: 3 (lower is better)
Translates to: HFAINAQSVYFL*ADPVAIEQSMF
Trigger: AAACATACTCTGCTCTATGGCCACAGGATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434231.6
3UTR TCA 72 bp ACCTTTATCCTTTGTTCTTTTGGGAAACGGGAGAGATaGAGGCAACACGCTGCTTCTAAAACAGCTCACACC +
Preference number: 3 (lower is better)
Translates to: TFILCSFGKRER*RQHAASKTAHT
Trigger: GGTGTGAGCTGTTTTAGAAGCAGCGTGTTGCCTTCATCTCTCCCGTTTCCCAAAAGAACAAAGGATAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR TCA 72 bp GGGAGCAAGTTGCGAAGTGACCACCTCCTGATCATTTaGGAGTCCGTTTACAGTGTAATCTTCACGATCTTT +
Preference number: 3 (lower is better)
Translates to: GSKLRSDHLLII*ESVYSVIFTIF
Trigger: AAAGATCGTGAAGATTACACTGTAAACGGACTCTCAAATGATCAGGAGGTGGTCACTTCGCAACTTGCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp AGTGCCAAAAGACTATTCAGCAACTGGAAACTGTCCTaGGAGAGCCACTCCAGAGCTATTTCTAAGACTTTC +
Preference number: 3 (lower is better)
Translates to: SAKRLFSNWKLS*ESHSRAISKTF
Trigger: GAAAGTCTTAGAAATAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 72 bp ATTTCATGGGAACAAAACAGATTTCTGCATTACCTCTaGCTGCTTTGTGGGTCCCTTAGTTGGCGTACACTT +
Preference number: 3 (lower is better)
Translates to: ISWEQNRFLHYL*LLCGSLSWRTL
Trigger: AAGTGTACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTGTTCCCATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CAA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTCTCCATAAATACTTGTaGAATGGCATTCTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRLHKYL*NGILEE
Trigger: CTCTTCAAGAATGCCATTCAACAAGTATTTATGGAG...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CAA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCACTCCATAAATACTTGTaGAATGGCATTCTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPLHKYL*NGILEE
Trigger: CTCTTCAAGAATGCCATTCAACAAGTATTTATGGAG...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR CAA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTAGCCTACTTTTCATTTaGGGTAGGCGAACTTCAGCC +
Preference number: 3 (lower is better)
Translates to: LVATDVHSLLHVRCFTWISLLFI*GRRTSA
Trigger: GGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGCT...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp TTATTTGACAAAGATCACAAGCTAGTGAGTGTGACATaGGGAGCTGTGACAGTTCTGGAACATAGAGTCTTA +
Preference number: 3 (lower is better)
Translates to: LFDKDHKLVSVT*GAVTVLEHRVL
Trigger: TAAGACTCTATGTTCCAGAACTGTCACAGCTCCCCATGTCACACTCACTAGCTTGTGATCTTTGTCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CAA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR CAA 90 bp CTTTGGAACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 3 (lower is better)
Translates to: LWNLEFVLQHHNHDLKRLSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...AAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTTCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442397.6
3UTR-3UTR CAA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCCTCCATAAATACTTGTaGAATGGCATTCTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSLHKYL*NGILEE
Trigger: CTCTTCAAGAATGCCATTCAACAAGTATTTATGGAG...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CAA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTCCATAAATACTTGTaGAATGGCATTCTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: KENDVSQHQSSVMGYGRALHKYL*NGILEE
Trigger: CTCTTCAAGAATGCCATTCAACAAGTATTTATGGAG...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
3UTR-3UTR CAA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTCATGCCAATTACTaGGTAAAGCTTGCAGCTAAT +
Preference number: 3 (lower is better)
Translates to: IFQIECILPLPETFCRRLCHANY*VKLAAN
Trigger: ATTAGCTGCAAGCTTTACCAAGTAATTGGCATGACA...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CCA 72 bp GCCTTAACTCTTCTGTACAGCAGTATCTTACATACATaGTATCCATGTTGCAGATTTCACTCAAAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: ALTLLYSSILHT*YPCCRFHSKLL
Trigger: GAGCAACTTTGAGTGAAATCTGCAACATGGATACCATGTATGTAAGATACTGCTGTACAGAAGAGTTAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: KWKSALISVANDDGLIFRKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGATGTCATGCCAATTACTaGGTAAAGCTTGCAGCTAAT +
Preference number: 3 (lower is better)
Translates to: KWKSALISVANDDGLIFRCHANY*VKLAAN
Trigger: ATTAGCTGCAAGCTTTACCAAGTAATTGGCATGACA...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGACTCCATAAATACTTGTaGAATGGCATTCTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: KWKSALISVANDDGLIFRLHKYL*NGILEE
Trigger: CTCTTCAAGAATGCCATTCAACAAGTATTTATGGAG...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR-3UTR CAA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCTATATGATTGAAGTTTaGGTCCCCAGATTGTATGGA +
Preference number: 3 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPYMIEV*VPRLYG
Trigger: TCCATACAATCTGGGGACCAAAACTTCAATCATATA...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR GCA 72 bp TTTATTTTTGGGTGTTGGGTGCCATGTTACTTTTGGTaGCTTAATACACCTACTTGGATTACTTACAAATGT +
Preference number: 3 (lower is better)
Translates to: FIFGCWVPCYFW*LNTPTWITYKC
Trigger: ACATTTGTAAGTAATCCAAGTAGGTGTATTAAGGCACCAAAAGTAACATGGCACCCAACACCCAAAAATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACCGCACAGGCCCCGCCTaGCTGGACCAAGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHRTGPA*LDQALA
Trigger: GGCCAGCGCTTGGTCCAGGCAGGCGGGGCCTGTGCG...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGACGCACAGGCCCCGCCTaGCTGGACCAAGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGRTGPA*LDQALA
Trigger: GGCCAGCGCTTGGTCCAGGCAGGCGGGGCCTGTGCG...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCGCGTCCGTGGGCGGCTaGCTGTTCCAGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPASVGG*LFQASR
Trigger: CCTGGAGGCCTGGAACAGCCAGCCGCCCACGGACGC...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCCGCACAGGCCCCGCCTaGCTGGACCAAGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLRTGPA*LDQALA
Trigger: GGCCAGCGCTTGGTCCAGGCAGGCGGGGCCTGTGCG...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGCCTGGACCAAGCGCTaGCCTTCCCGGGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRAWTKR*PSRGAQ
Trigger: CTGGGCGCCCCGGGAAGGCCAGCGCTTGGTCCAGGC...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGCGTCCGTGGGCGGCTaGCTGTTCCAGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWASVGG*LFQASR
Trigger: CCTGGAGGCCTGGAACAGCCAGCCGCCCACGGACGC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCCAGGGTTCCCGGCTCTaGCGTCCGTGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLQGSRL*RPWAAG
Trigger: GCCAGCCGCCCACGGACGCCAGAGCCGGGAACCCTG...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAACGGCTCTGGCGTCCGTaGGCGGCTGGCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAERLWRP*AAGCSR
Trigger: CCTGGAACAGCCAGCCGCCCACGGACGCCAGAGCCG...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCCTGGAGGCACTTTATTaGCAGCCTGGCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPLEALY*QPGGLA
Trigger: CGCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAG...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGAGCGGAAGGAGCGGTGTaGAGGGAGGCGGTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRAEGAV*REAVRG
Trigger: GCCACGGACCGCCTCCCTCCACACCGCTCCTTCCGC...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCCAGCTCACACCTGGCTaGTCACACAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPQLTPG*SHRGPR
Trigger: TCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTG...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGCTGGAGGCACTTTATTaGCAGCCTGGCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWLEALY*QPGGLA
Trigger: CGCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAG...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCTGGAGGCACTTTATTaGCAGCCTGGCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTLEALY*QPGGLA
Trigger: CGCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCAGGGTTCCCGGCTCTaGCGTCCGTGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVQGSRL*RPWAAG
Trigger: GCCAGCCGCCCACGGACGCCAGAGCCGGGAACCCTG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTACGCACAGGCCCCGCCTaGCTGGACCAAGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLRTGPA*LDQALA
Trigger: GGCCAGCGCTTGGTCCAGGCAGGCGGGGCCTGTGCG...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAATTTTCAGGACCAGGGTaGTCACCGCACAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAEFSGPG*SPHRPR
Trigger: GCGGGGCCTGTGCGGTGACCACCCTGGTCCTGAAAA...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTCGGCTCTGGCGTCCGTaGGCGGCTGGCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVRLWRP*AAGCSR
Trigger: CCTGGAACAGCCAGCCGCCCACGGACGCCAGAGCCG...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGACTACAGCTTTCCCTGTaGCACCCTCCACCCCCAACC +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGLQLSL*HPPPPT
Trigger: GGTTGGGGGTGGAGGGTGCCACAGGGAAAGCTGTAG...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACCCTGCCAGAGGTGGCTaGAGGCACTTTATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHPARGG*RHFIAS
Trigger: GCTGGCAATAAAGTGCCTCCAGCCACCTCTGGCAGG...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCAACCTTGCAGCGAATaGCAGCCTAAGCTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTQPCSE*QPKLGR
Trigger: ACGCCCCAGCTTAGGCTGCCATTCGCTGCAAGGTTG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR CCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGCCTGGACCAAGCGCTaGCCTTCCCGGGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGAWTKR*PSRGAQ
Trigger: CTGGGCGCCCCGGGAAGGCCAGCGCTTGGTCCAGGC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGAGGGCGCTCGGGGCTaGGACTTTTCAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSEGARG*DFSGPG
Trigger: CCCTGGTCCTGAAAAGTCCCAGCCCCGAGCGCCCTC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCCAGGGTTCCCGGCTCTaGCGTCCGTGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSQGSRL*RPWAAG
Trigger: GCCAGCCGCCCACGGACGCCAGAGCCGGGAACCCTG...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCTACAGCTTTCCCTGTaGCACCCTCCACCCCCAACC +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRLQLSL*HPPPPT
Trigger: GGTTGGGGGTGGAGGGTGCCACAGGGAAAGCTGTAG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATGCGGAAGGAGCGGTGTaGAGGGAGGCGGTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDAEGAV*REAVRG
Trigger: GCCACGGACCGCCTCCCTCCACACCGCTCCTTCCGC...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAACTTTATTGCCAGCCTaGCGGGCTGGCGAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAETLLPA*RAGERQ
Trigger: TTGGCGCTCGCCAGCCCGCCAGGCTGGCAATAAAGT...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCACTTTATTGCCAGCCTaGCGGGCTGGCGAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLTLLPA*RAGERQ
Trigger: TTGGCGCTCGCCAGCCCGCCAGGCTGGCAATAAAGT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAATTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAELSAAK*RQGSRL
Trigger: GAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCTTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLLSAAK*RQGSRL
Trigger: GAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAACTGGCCCCAAAGACTaGTGTTTCAGGCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAETGPKD*CFRRST
Trigger: CGTGGAGCGCCTGAAACACCAGTCTTTGGGGCCAGT...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAAATGGCAGCCTAAGCTaGGGCGTGCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGNGSLS*GVPDFG
Trigger: TCCAAAGTCTGGCACGCCCCAGCTTAGGCTGCCATT...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR CCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCAACCTTGCAGCGAATaGCAGCCTAAGCTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRQPCSE*QPKLGR
Trigger: ACGCCCCAGCTTAGGCTGCCATTCGCTGCAAGGTTG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR CCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCTTCGTCCAGGGCCCATaGGGGTGTTCAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLFVQGP*GCSTLQ
Trigger: CTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAA...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTGCCTGGACCAAGCGCTaGCCTTCCCGGGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTAWTKR*PSRGAQ
Trigger: CTGGGCGCCCCGGGAAGGCCAGCGCTTGGTCCAGGC...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAGCCTGGACCAAGCGCTaGCCTTCCCGGGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAAWTKR*PSRGAQ
Trigger: CTGGGCGCCCCGGGAAGGCCAGCGCTTGGTCCAGGC...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTTTTTCAGGACCAGGGTaGTCACCGCACAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRFSGPG*SPHRPR
Trigger: GCGGGGCCTGTGCGGTGACCACCCTGGTCCTGAAAA...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGCGTCCGTGGGCGGCTaGCTGTTCCAGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGASVGG*LFQASR
Trigger: CCTGGAGGCCTGGAACAGCCAGCCGCCCACGGACGC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCCGGCTCTGGCGTCCGTaGGCGGCTGGCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFRLWRP*AAGCSR
Trigger: CCTGGAACAGCCAGCCGCCCACGGACGCCAGAGCCG...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGCAGGGTTCCCGGCTCTaGCGTCCGTGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLQGSRL*RPWAAG
Trigger: GCCAGCCGCCCACGGACGCCAGAGCCGGGAACCCTG...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 72 bp TCTCAAATACAGGCAGGCTCGAGCTCCTGTTTTGAGTaGGGTGGAGGGAGCAAGTTGCGAAGTGACCACCTC +
Preference number: 4 (lower is better)
Translates to: SQIQAGSSSCFE*GGGSKLRSDHL
Trigger: GAGGTGGTCACTTCGCAACTTGCTCCCTCCACCCAACTCAAAACAGGAGCTCGAGCCTGCCTGTATTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 72 bp TCCAGTCTCAAATACAGGCAGGCTCGAGCTCCTGTTTaGAGTTGGGTGGAGGGAGCAAGTTGCGAAGTGACC +
Preference number: 4 (lower is better)
Translates to: SSLKYRQARAPV*SWVEGASCEVT
Trigger: GGTCACTTCGCAACTTGCTCCCTCCACCCAACTCAAAACAGGAGCTCGAGCCTGCCTGTATTTGAGACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGTTCCAGGATCCAGCTaGTCAGGAATGGTGCCAACA +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWVPGSS*SGMVPT
Trigger: TGTTGGCACCATTCCTGATCAGCTGGATCCTGGAAC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACAACATCAGTCCTCAGTaGTGGGATACGGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHNISPQ*WDTVEH
Trigger: GTGCTCTACCGTATCCCATCACTGAGGACTGATGTT...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTCCTGTGGGCAAGGAATaGAGGCGGAAGGAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRPVGKE*RRKERC
Trigger: ACACCGCTCCTTCCGCCTTCATTCCTTGCCCACAGG...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCCAGGTCCCGCCAGCATaGACACTTCGTATGCATCAC +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLQVPPA*TLRMHH
Trigger: GTGATGCATACGAAGTGTTCATGCTGGCGGGACCTG...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS-3UTR GCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGATTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRLSAAK*RQGSRL
Trigger: GAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACGCTGATCAGGAATGGTaGCAACAAACGGGATTACCG +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHADQEW*QQTGLP
Trigger: CGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGC...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGACACCTGGAATCTGTCTaGGTCACTAGGAACATGCCC +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGHLESV*VTRNMP
Trigger: GGGCATGTTCCTAGTGACGCAGACAGATTCCAGGTG...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACCTCGAGGTTTCATGCTaGTGCCATTCTGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHLEVSC*CHSADP
Trigger: TGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAG...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRGGVQP*SEWQPK
Trigger: CTTAGGCTGCCATTCGCTGCAAGGTTGAACACCCCC...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR GCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTGTGGGTGAGGAGACCTaGCAGAGGTGGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVVGEET*QRWLEA
Trigger: TGCCTCCAGCCACCTCTGGCAGGTCTCCTCACCCAC...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAGTGGGTGAGGAGACCTaGCAGAGGTGGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPVGEET*QRWLEA
Trigger: TGCCTCCAGCCACCTCTGGCAGGTCTCCTCACCCAC...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTGTGGGTGAGGAGACCTaGCAGAGGTGGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVVGEET*QRWLEA
Trigger: TGCCTCCAGCCACCTCTGGCAGGTCTCCTCACCCAC...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGAATGGCAGCCTAAGCTaGGGCGTGCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRNGSLS*GVPDFG
Trigger: TCCAAAGTCTGGCACGCCCCAGCTTAGGCTGCCATT...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR CCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGACAACCTTGCAGCGAATaGCAGCCTAAGCTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRQPCSE*QPKLGR
Trigger: ACGCCCCAGCTTAGGCTGCCATTCGCTGCAAGGTTG...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR CCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGATTCGTCCAGGGCCCATaGGGGTGTTCAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRFVQGP*GCSTLQ
Trigger: CTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAA...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCATTTTCAGGACCAGGGTaGTCACCGCACAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPFSGPG*SPHRPR
Trigger: GCGGGGCCTGTGCGGTGACCACCCTGGTCCTGAAAA...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGGCGTCCGTGGGCGGCTaGCTGTTCCAGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQASVGG*LFQASR
Trigger: CCTGGAGGCCTGGAACAGCCAGCCGCCCACGGACGC...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGCGGCTCTGGCGTCCGTaGGCGGCTGGCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKRLWRP*AAGCSR
Trigger: CCTGGAACAGCCAGCCGCCCACGGACGCCAGAGCCG...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCCCCAGGAAGTGTCATaGACGGTGTCTTCTACCTCT +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTPQEVS*TVSSTS
Trigger: AGAGGTAGAAGACACCGTCCATGACACTTCCTGGGG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS-3UTR CCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCGGAAGGAGCGGTGTaGAGGGAGGCGGTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISAEGAV*REAVRG
Trigger: GCCACGGACCGCCTCCCTCCACACCGCTCCTTCCGC...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCGTTCCAGGATCCAGCTaGTCAGGAATGGTGCCAACA +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLVPGSS*SGMVPT
Trigger: TGTTGGCACCATTCCTGATCAGCTGGATCCTGGAAC...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGTTCCAGGATCCAGCTaGTCAGGAATGGTGCCAACA +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRVPGSS*SGMVPT
Trigger: TGTTGGCACCATTCCTGATCAGCTGGATCCTGGAAC...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGAGGGAAACGGGAGAGATaGAGGCAACACGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRGKRER*RQHAAS
Trigger: AGAAGCAGCGTGTTGCCTTCATCTCTCCCGTTTCCC...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCACCTGTGGGCAAGGAATaGAGGCGGAAGGAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPPVGKE*RRKERC
Trigger: ACACCGCTCCTTCCGCCTTCATTCCTTGCCCACAGG...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACGAAGTGACCACCTCCTaGTCATTTGAGAGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHEVTTS*SFESPF
Trigger: AAACGGACTCTCAAATGATCAGGAGGTGGTCACTTC...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWEVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGCTCGAGGTTTCATGCTaGTGCCATTCTGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWLEVSC*CHSADP
Trigger: TGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAG...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGCAGCCGGCCCTGTCTaGGTCACTAGGAACATGCCC +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLAAGPV*VTRNMP
Trigger: GGGCATGTTCCTAGTGACGCAGACAGGGCCGGCTGC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323938.10
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCACAGCTCACACCTGGCTaGTCACACAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPQLTPG*SHRGPR
Trigger: TCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTG...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCCCACCTGGCTTGTGCTaGCACATAAGCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSPPGLC*HISLSC
Trigger: GCAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGG...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTCCACCTGGCTTGTGCTaGCACATAAGCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRPPGLC*HISLSC
Trigger: GCAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGG...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCGTCCGTGGCGCCTCCTaGTTTGTTAATGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTVRGAS*FVNVLH
Trigger: ATGAAGCACATTAACAAAGCAGGAGGCGCCACGGAC...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AACAATGCAGCCGGCCCTTTTGAAACGAGGATTGAAATGAAAGGCCACATCGGCTCACAAGCTGGGGCGTaGCAGACTTTGGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: NNAAGPFETRIEMKGHIGSQAGA*QTLEPG
Trigger: TCCAGGTTCCAAAGTCTGGCACGCCCCAGCTTGTGA...GCCGATGTGGCCTTTCATTTCAATCCTCGTTTCAAAAGGGCCGGCTGCATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCTTGAAACTGAGGCACTaGCCCCAAAGACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPLKLRH*PQRLVF
Trigger: AAACACCAGTCTTTGGGGCCAGTGCCTCAGTTTCAA...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGAGGGCGCTCGGGGCTaGGACTTTTCAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGEGARG*DFSGPG
Trigger: CCCTGGTCCTGAAAAGTCCCAGCCCCGAGCGCCCTC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCGAGGGCGCTCGGGGCTaGGACTTTTCAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFEGARG*DFSGPG
Trigger: CCCTGGTCCTGAAAAGTCCCAGCCCCGAGCGCCCTC...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCACTACAGCTTTCCCTGTaGCACCCTCCACCCCCAACC +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPLQLSL*HPPPPT
Trigger: GGTTGGGGGTGGAGGGTGCCACAGGGAAAGCTGTAG...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCAACTGGAAACTGTCCTaGGAGAGCCACTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLNWKLS*ESHSRA
Trigger: AGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAGAGACCTGCCAGAGGTaGCTGGAGGCACTTTATTGC +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELETCQR*LEALYC
Trigger: GCAATAAAGTGCCTCCAGCCACCTCTGGCAGGTCTC...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GCAAAAATACTCACAAGCTGGGGCGTGCCAGACTTTGGAACCTGGAATTTGTCCAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: AKILTSWGVPDFGTWNLSKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...GGACAAATTCCAGGTTCCAAAGTCTGGCACGCCCCAGCTTGTGAGTATTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR TCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTCTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRLHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCAACATCAGTCCTCAGTaGTGGGATACGGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLNISPQ*WDTVEH
Trigger: GTGCTCTACCGTATCCCATCACTGAGGACTGATGTT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCTTTAGCACCCAAAGCTaGCGCCTCATTTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTFSTQS*RLICTV
Trigger: TACAGTGCAAATGAGGCGTCAGCTTTGGGTGCTAAA...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTACCTGTGGGCAAGGAATaGAGGCGGAAGGAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLPVGKE*RRKERC
Trigger: ACACCGCTCCTTCCGCCTTCATTCCTTGCCCACAGG...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGAAGTGACCACCTCCTaGTCATTTGAGAGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWEVTTS*SFESPF
Trigger: AAACGGACTCTCAAATGATCAGGAGGTGGTCACTTC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAAACGTGACTAGCAGTTaGTCCAGTCCTCATACAGGC +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAENVTSS*SSPHTG
Trigger: GCCTGTATGAGGACTGGATCAACTGCTAGTCACGTT...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCGGAGGCGCTGCTTTTTaGCAGTACACACCTATCCTT +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLGGAAF*QYTPIL
Trigger: AAGGATAGGTGTGTACTGTCAAAAAGCAGCGCCTCC...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTTTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVLSAAK*RQGSRL
Trigger: GAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCTCGAGGTTTCATGCTaGTGCCATTCTGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRLEVSC*CHSADP
Trigger: TGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSGGVQP*SEWQPK
Trigger: CTTAGGCTGCCATTCGCTGCAAGGTTGAACACCCCC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366584.9
CDS-3UTR GCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGATTTCTGCATTACCTCTaGCTGCTTTGTGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGFLHYL*LLCGSL
Trigger: AAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAA...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATCAGCTCACACCTGGCTaGTCACACAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDQLTPG*SHRGPR
Trigger: TCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTG...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTTCCCCACCTGGCTTGTaGTGCCACATAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVSPPGL*CHISLS
Trigger: GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGA...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTATTCAGCTTCCAGTaGAAGCCTGTGGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWLFSFQ*KPVGKE
Trigger: TTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAA...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGAGGCACTTTATTaGCAGCCTGGCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRALEALY*QPGGLA
Trigger: CGCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAG...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCCAGCTGATCAGGAATaGTGCCAACAAACGGGATTA +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTPADQE*CQQTGL
Trigger: TAATCCCGTTTGTTGGCACCATTCCTGATCAGCTGG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCGGGCGTGCCAGACTTTaGAACCTGGAATTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLGRARL*NLEFVL
Trigger: AAGGACAAATTCCAGGTTCCAAAGTCTGGCACGCCC...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416919.6
CDS-3UTR CCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTTCGTCCAGGGCCCATaGGGGTGTTCAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVFVQGP*GCSTLQ
Trigger: CTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAA...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCTTTTCAGGACCAGGGTaGTCACCGCACAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSFSGPG*SPHRPR
Trigger: GCGGGGCCTGTGCGGTGACCACCCTGGTCCTGAAAA...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCCATTTACAGCCACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTPFTAT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTGGCTGTAAATGG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGACCATTTACAGCCACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGPFTAT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTGGCTGTAAATGG...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTSVYFL*ADPVAI
Trigger: TATGGCCACAGGATCGGCCCAGAGAAAATAGACACT...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACTGTGGGTCCCTTAGTTaGCGTACACTTTCTGATAGT +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHCGSLS*RTLSDS
Trigger: ACTATCAGAAAGTGTACGCCAACTAAGGGACCCACA...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCAAGATCCCATATACATaGAACTTCTGCCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPKIPYT*NFCQLP
Trigger: GGGGAGTTGGCAGAAGTTCCATGTATATGGGATCTT...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTACTACAGCTTTCCCTGTaGCACCCTCCACCCCCAACC +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLLQLSL*HPPPPT
Trigger: GGTTGGGGGTGGAGGGTGCCACAGGGAAAGCTGTAG...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTAAAACAGCTCACACCTaGCTGCTCACACAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRKTAHT*LLTQRA
Trigger: GGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTT...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCCTGCCAGAGGTGGCTaGAGGCACTTTATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVPARGG*RHFIAS
Trigger: GCTGGCAATAAAGTGCCTCCAGCCACCTCTGGCAGG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGAGACCTGCCAGAGGTaGCTGGAGGCACTTTATTGC +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSETCQR*LEALYC
Trigger: GCAATAAAGTGCCTCCAGCCACCTCTGGCAGGTCTC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 72 bp TGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTaGCCTTCTACAGCTTTCCCTGTGGCACCCTCCACC +
Preference number: 4 (lower is better)
Translates to: WRKITLGDSRVF*PSTAFPVAPST
Trigger: GGTGGAGGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTGTTCCAGGATCCAGCTaGTCAGGAATGGTGCCAACA +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRVPGSS*SGMVPT
Trigger: TGTTGGCACCATTCCTGATCAGCTGGATCCTGGAAC...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGAAACATCAGTCCTCAGTaGTGGGATACGGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRNISPQ*WDTVEH
Trigger: GTGCTCTACCGTATCCCATCACTGAGGACTGATGTT...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCCGTCTGTGTAGACTCTaGTTTGCCCTAAGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPRLCRL*FALSSN
Trigger: ATTTGAACTTAGGGCAAATCAGAGTCTACACAGACG...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCACTCTTTTGATTGAATaGTTGCCGGAAAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPTLLIE*LPESAR
Trigger: CCTTGCACTTTCCGGCAATCATTCAATCAAAAGAGT...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAAACGTGACTAGCAGTTaGTCCAGTCCTCATACAGGC +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELNVTSS*SSPHTG
Trigger: GCCTGTATGAGGACTGGATCAACTGCTAGTCACGTT...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGAACGTGACTAGCAGTTaGTCCAGTCCTCATACAGGC +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLNVTSS*SSPHTG
Trigger: GCCTGTATGAGGACTGGATCAACTGCTAGTCACGTT...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CAGGCAAAAATACTCACAAGCTGGGGCGTGCCAGACTTTGGAACCTGGAATTTGGCTGATCAGGAATGGTaGCAACAAACGGGATTACCG +
Preference number: 4 (lower is better)
Translates to: QAKILTSWGVPDFGTWNLADQEW*QQTGLP
Trigger: CGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGC...CAAATTCCAGGTTCCAAAGTCTGGCACGCCCCAGCTTGTGAGTATTTTTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTCACCTGGAATCTGTCTaGGTCACTAGGAACATGCCC +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRHLESV*VTRNMP
Trigger: GGGCATGTTCCTAGTGACGCAGACAGATTCCAGGTG...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TCACTTTGCCATAAATGCCCAGAGTGTCTATTTTCTCTGGGCCGATCCTGTGGCCTCGAGGTTTCATGCTaGTGCCATTCTGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: SLCHKCPECLFSLGRSCGLEVSC*CHSADP
Trigger: TGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAG...GCCACAGGATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTCGGCTCGAGGTTTCATaGTGCTGCCATTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRRLEVS*CCHSAD
Trigger: ATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCG...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCCATTTATCAAAGTATTaGAAACAATGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPHLSKY*KQCSRP
Trigger: GGGCCGGCTGCATTGTTTGCAATACTTTGATAAATG...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVGGVQP*SEWQPK
Trigger: CTTAGGCTGCCATTCGCTGCAAGGTTGAACACCCCC...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPGGVQP*SEWQPK
Trigger: CTTAGGCTGCCATTCGCTGCAAGGTTGAACACCCCC...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTGCCTGCCTTATGAATaGCTGAAGTCTAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWCLPYE*LKSNPD
Trigger: GTCAGGATTAGACTTCAGGCATTCATAAGGCAGGCA...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACGTAGACAGTTCTGGGTaGGATTTTAGAAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHVDSSG*DFRNVS
Trigger: GGAGACATTTCTAAAATCGCACCCAGAACTGTCTAC...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPGGVQP*SEWQPL
Trigger: AAGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCC...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVGGVQP*SEWQPL
Trigger: AAGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCC...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTACCACCTGGCTTGTGCTaGCACATAAGCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLPPGLC*HISLSC
Trigger: GCAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGG...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATTCCCCACCTGGCTTGTaGTGCCACATAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDSPPGL*CHISLS
Trigger: GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGA...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTATCCCCACCTGGCTTGTaGTGCCACATAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLSPPGL*CHISLS
Trigger: GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGA...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTTTGGGTGTTGGGTaGCATGTTACTTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWFLGVG*HVTFGA
Trigger: GGCACCAAAAGTAACATGGCACCCAACACCCAAAAA...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGTTATTCAGCTTCCAGTaGAAGCCTGTGGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRLFSFQ*KPVGKE
Trigger: TTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAA...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGTGGGTGAGGAGACCTaGCAGAGGTGGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVVGEET*QRWLEA
Trigger: TGCCTCCAGCCACCTCTGGCAGGTCTCCTCACCCAC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGACTGGCCCCAAAGACTaGTGTTTCAGGCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVTGPKD*CFRRST
Trigger: CGTGGAGCGCCTGAAACACCAGTCTTTGGGGCCAGT...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GAATATTCACTTTGCCATAAATGCCCAGAGTGTCTATTTTCTCTGGGCCGATCCACTGGCCCCAAAGACTaGTGTTTCAGGCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: EYSLCHKCPECLFSLGRSTGPKD*CFRRST
Trigger: CGTGGAGCGCCTGAAACACCAGTCTTTGGGGCCAGT...GGATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCAAAGTGAATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR CCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCTTGAAACTGAGGCACTaGCCCCAAAGACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLLKLRH*PQRLVF
Trigger: AAACACCAGTCTTTGGGGCCAGTGCCTCAGTTTCAA...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCCAGACTTTGGAACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRPDFGT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTTCCAAAGTCTGG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416919.6
CDS-3UTR CCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGATATGACAGTGATCACTaGGGAAGGAGTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGYDSDH*GRSCVF
Trigger: GAAGACACAACTCCTTCCCCAGTGATCACTGTCATA...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGACTATTACTAGGAAGCTaGGGCGTGCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRLLLGS*GVPDFG
Trigger: TCCAAAGTCTGGCACGCCCCAGCTTCCTAGTAATAG...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCGCCTACTTTTCATTTTaGGTAGGCGAACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTAYFSF*VGELQP
Trigger: AGGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGC...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTGCTCCTGTTTTGAGTTaGGTGGAGGGAGCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRAPVLS*VEGASC
Trigger: GCAACTTGCTCCCTCCACCCAACTCAAAACAGGAGC...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCACTTTATTGCCAGCCTaGCGGGCTGGCGAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSTLLPA*RAGERQ
Trigger: TTGGCGCTCGCCAGCCCGCCAGGCTGGCAATAAAGT...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAACTTTATTGCCAGCCTaGCGGGCTGGCGAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRATLLPA*RAGERQ
Trigger: TTGGCGCTCGCCAGCCCGCCAGGCTGGCAATAAAGT...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTATTCAGTGCTGAGATaGGAGTTTATCCCAAGCGAC +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWYSVLR*EFIPSD
Trigger: GTCGCTTGGGATAAACTCCCATCTCAGCACTGAATA...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCTCTCCCCAGGACTCCTaGAGAAAAGAATTTCTTACA +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTSPQDS*RKEFLT
Trigger: TGTAAGAAATTCTTTTCTTCAGGAGTCCTGGGGAGA...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVLHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTACTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLLHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATCTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDLHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAEGPLRS*CNACRK
Trigger: TTTTCTACAGGCATTACATCAACTCCTAAGGGGTCC...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGCGTCTGTGTAGACTCTaGTTTGCCCTAAGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWRLCRL*FALSSN
Trigger: ATTTGAACTTAGGGCAAATCAGAGTCTACACAGACG...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCGTCTGTGTAGACTCTaGTTTGCCCTAAGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTRLCRL*FALSSN
Trigger: ATTTGAACTTAGGGCAAATCAGAGTCTACACAGACG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTGCCTTATGAATGCCTaGAGTCTAATCCTGACCTTA +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWCLMNA*SLILTL
Trigger: TAAGGTCAGGATTAGACTTCAGGCATTCATAAGGCA...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAAGTGGAAGAGTGCTTTaGTCTCAGTTGCTAATGATG +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGSGRVL*SQLLMM
Trigger: CATCATTAGCAACTGAGATCAAAGCACTCTTCCACT...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCAGTGGAAGAGTGCTTTaGTCTCAGTTGCTAATGATG +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTSGRVL*SQLLMM
Trigger: CATCATTAGCAACTGAGATCAAAGCACTCTTCCACT...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACAAGTCAAAGTGTGATTaGCAGTCGAATCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHKSKCD*QSNLCS
Trigger: AGAGCAAAGATTCGACTGTCAATCACACTTTGACTT...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAAGTACTGGGTCATGGTaGAGTTGGAAAGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELSTGSW*SWKVRV
Trigger: AACCCTCACTTTCCAACTTCACCATGACCCAGTACT...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGGGGAAACGGGAGAGATaGAGGCAACACGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVGKRER*RQHAAS
Trigger: AGAAGCAGCGTGTTGCCTTCATCTCTCCCGTTTCCC...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAACACCTCCTGATCATTTaGGAGTCCGTTTACAGTGTA +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAEHLLII*ESVYSV
Trigger: TACACTGTAAACGGACTCTCAAATGATCAGGAGGTG...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGAGCAAGTTGCGAAGTaGCCACCTCCTGATCATTTG +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSEQVAK*PPPDHL
Trigger: CAAATGATCAGGAGGTGGTCACTTCGCAACTTGCTC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACAGCTCCCAAATGGTaGAACTGGTATTCTAAGATG +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGTAPKW*NWYSKM
Trigger: CATCTTAGAATACCAGTTTCACCATTTGGGAGCTGT...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTGCTGATCAGGAATGGTaGCAACAAACGGGATTACCG +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRADQEW*QQTGLP
Trigger: CGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGC...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGCGTCACTAGGAACATaGCCACGTATCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRASLGT*PRITIK
Trigger: TTTGATTGTGATACGTGGGCATGTTCCTAGTGACGC...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWREVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTCGGCTCGAGGTTTCATaGTGCTGCCATTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVRLEVS*CCHSAD
Trigger: ATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCG...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCGGCTCGAGGTTTCATaGTGCTGCCATTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVRLEVS*CCHSAD
Trigger: ATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTATTTCTGCATTACCTCTaGCTGCTTTGTGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELFLHYL*LLCGSL
Trigger: AAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAA...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGATTCTCGAGTCTTCTTaGCTTCTACAGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRILESS*LLQLSL
Trigger: CAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAAT...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACAGCTCACACCTGGCTaGTCACACAGAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVQLTPG*SHRGPR
Trigger: TCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCCCATGTTACTTTTGGTaGCTTAATACACCTACTTGG +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPPCYFW*LNTPTW
Trigger: CCAAGTAGGTGTATTAAGGCACCAAAAGTAACATGG...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGTTTTTGGGTGTTGGGTaGCATGTTACTTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRFLGVG*HVTFGA
Trigger: GGCACCAAAAGTAACATGGCACCCAACACCCAAAAA...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACCAGATTGTATGGAAATaGCTAGTGGCATTAAGGATG +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHQIVWK*LVALRM
Trigger: CATCCTTAATGCCACTAGGCATTTCCATACAATCTG...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TTTTCTCTGGGCCGATCCTGTGGCCATAGAGCAGAGTATGTTTTCCATTTACAGATGCTGCTGCCATTCTaGAGATCCACCTGGAATCGG +
Preference number: 4 (lower is better)
Translates to: FSLGRSCGHRAEYVFHLQMLLPF*RSTWNR
Trigger: CCGATTCCAGGTGGATCTGCAGAATGGCAGCAGCAT...CTGTAAATGGAAAACATACTCTGCTCTATGGCCACAGGATCGGCCCAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR CCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAACTGGCCCCAAAGACTaGTGTTTCAGGCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRATGPKD*CFRRST
Trigger: CGTGGAGCGCCTGAAACACCAGTCTTTGGGGCCAGT...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TCACTTTGCCATAAATGCCCAGAGTGTCTATTTTCTCTGGGCCGATCCTGTGGCTTGAAACTGAGGCACTaGCCCCAAAGACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SLCHKCPECLFSLGRSCGLKLRH*PQRLVF
Trigger: AAACACCAGTCTTTGGGGCCAGTGCCTCAGTTTCAA...GCCACAGGATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGAATGGCAGCCTAAGCTaGGGCGTGCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVNGSLS*GVPDFG
Trigger: TCCAAAGTCTGGCACGCCCCAGCTTAGGCTGCCATT...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR CCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTTTCGTCCAGGGCCCATaGGGGTGTTCAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGFVQGP*GCSTLQ
Trigger: CTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAA...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLSVYFL*ADPVAI
Trigger: TATGGCCACAGGATCGGCCCAGAGAAAATAGACACT...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCCGATCCTGTGGCCATAGAGCAGAGTATGTTTTCCATTTACAGCCACCTGGAAAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: ADPVAIEQSMFSIYSHLESVYFL*ADPVAI
Trigger: TATGGCCACAGGATCGGCCCAGAGAAAATAGACACT...TTCCAGGTGGCTGTAAATGGAAAACATACTCTGCTCTATGGCCACAGGATCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR CCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAGGGCGTGCCAGACTTTaGAACATTTTCTCTACTTAT +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGGRARL*NIFSTY
Trigger: ATAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCC...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGGGCGTGCCAGACTTTaGAACATTTTCTCTACTTAT +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWGRARL*NIFSTY
Trigger: ATAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCAGAAATCAGCTGCCTTaGGCTTGGCATCAAGTTAAT +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTRNQLP*AWHQVN
Trigger: ATTAACTTGATGCCAAGCCCAAGGCAGCTGATTTCT...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGAGAAATCAGCTGCCTTaGGCTTGGCATCAAGTTAAT +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWRNQLP*AWHQVN
Trigger: ATTAACTTGATGCCAAGCCCAAGGCAGCTGATTTCT...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGTGTGGGTCCCTTAGTTaGCGTACACTTTCTGATAGT +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRCGSLS*RTLSDS
Trigger: ACTATCAGAAAGTGTACGCCAACTAAGGGACCCACA...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGAGACCTGCCAGAGGTaGCTGGAGGCACTTTATTGC +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLETCQR*LEALYC
Trigger: GCAATAAAGTGCCTCCAGCCACCTCTGGCAGGTCTC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGTGCCAGAAGAGACTTaGAGGCGCTGCTTTTTGACA +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSVPEET*RRCFLT
Trigger: TGTCAAAAAGCAGCGCCTCCAAGTCTCTTCTGGCAC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS-3UTR TCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTCTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGLHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGAGTTGAATGGCATTCTTaGAGAGTCAGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRVEWHS*RVSQSR
Trigger: CCTACTTTGGCTGACTCTTCAAGAATGCCATTCAAC...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGAGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRGPLRS*CNACRK
Trigger: TTTTCTACAGGCATTACATCAACTCCTAAGGGGTCC...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTAACATCAGTCCTCAGTaGTGGGATACGGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVNISPQ*WDTVEH
Trigger: GTGCTCTACCGTATCCCATCACTGAGGACTGATGTT...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAAAGTCAAAGTGTGATTaGCAGTCGAATCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGKSKCD*QSNLCS
Trigger: AGAGCAAAGATTCGACTGTCAATCACACTTTGACTT...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGAATGGCAGCCTCTTTaGCACATAGTTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSEWQPL*HIVHRW
Trigger: CCACCTATGAACTATGTGTCAAAGAGGCTGCCATTC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTTTAGCACCCAAAGCTaGCGCCTCATTTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSFSTQS*RLICTV
Trigger: TACAGTGCAAATGAGGCGTCAGCTTTGGGTGCTAAA...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCAGATCAGTCCTTTACTaGTTCATTGCTTATCTAAGC +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPRSVLY*FIAYLS
Trigger: GCTTAGATAAGCAATGAATCAGTAAAGGACTGATCT...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCCCTCATACATTTATATaGTTGAAGTTTTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPPHTFI*LKFWSP
Trigger: TGGGGACCAAAACTTCAATCATATAAATGTATGAGG...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGACACCTCCTGATCATTTaGGAGTCCGTTTACAGTGTA +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRHLLII*ESVYSV
Trigger: TACACTGTAAACGGACTCTCAAATGATCAGGAGGTG...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGCACCTCCTGATCATTTaGGAGTCCGTTTACAGTGTA +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLHLLII*ESVYSV
Trigger: TACACTGTAAACGGACTCTCAAATGATCAGGAGGTG...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQLSAAK*RQGSRL
Trigger: GAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAGCTGATCAGGAATGGTaGCAACAAACGGGATTACCG +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPADQEW*QQTGLP
Trigger: CGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGC...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAGCGTCACTAGGAACATaGCCACGTATCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELASLGT*PRITIK
Trigger: TTTGATTGTGATACGTGGGCATGTTCCTAGTGACGC...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AACAATGCAGCCGGCCCTTTTGAAACGAGGATTGAAATGAAAGGCCACATCGGCGCGTCACTAGGAACATaGCCACGTATCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: NNAAGPFETRIEMKGHIGASLGT*PRITIK
Trigger: TTTGATTGTGATACGTGGGCATGTTCCTAGTGACGC...GCCGATGTGGCCTTTCATTTCAATCCTCGTTTCAAAAGGGCCGGCTGCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR GCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGGCGTCACTAGGAACATaGCCACGTATCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLASLGT*PRITIK
Trigger: TTTGATTGTGATACGTGGGCATGTTCCTAGTGACGC...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCACCTGGAATCTGTCTaGGTCACTAGGAACATGCCC +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVHLESV*VTRNMP
Trigger: GGGCATGTTCCTAGTGACGCAGACAGATTCCAGGTG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPEVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCTCGAGGTTTCATGCTaGTGCCATTCTGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVLEVSC*CHSADP
Trigger: TGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp AATATTCCACATGAAATAACCCAGGCAAAAATACTCACAAGCTGGGGCGTGCCACGGCTCGAGGTTTCATaGTGCTGCCATTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: NIPHEITQAKILTSWGVPRLEVS*CCHSAD
Trigger: ATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCG...TGGCACGCCCCAGCTTGTGAGTATTTTTGCCTGGGTTATTTCATGTGGAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR GCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAACATTTATCAAAGTATTaGAAACAATGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAEHLSKY*KQCSRP
Trigger: GGGCCGGCTGCATTGTTTGCAATACTTTGATAAATG...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGTGTACGCCATTTACTaGAACCTTGAATTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWVYAIY*NLEFSN
Trigger: GTTAGAGAATTCAAGGTTGCAGTAAATGGCGTACAC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTGTGCTCAGATGTCATaGCAATTACTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWCAQMS*QLLGKA
Trigger: AGCTTTACCAAGTAATTGGCATGACATCTGAGCACA...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGGGVQP*SEWQPL
Trigger: AAGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR GCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTCCCCACCTGGCTTGTaGTGCCACATAAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLSPPGL*CHISLS
Trigger: GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGA...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGACCATGTTACTTTTGGTaGCTTAATACACCTACTTGG +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGPCYFW*LNTPTW
Trigger: CCAAGTAGGTGTATTAAGGCACCAAAAGTAACATGG...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGTTTTTGGGTGTTGGGTaGCATGTTACTTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLFLGVG*HVTFGA
Trigger: GGCACCAAAAGTAACATGGCACCCAACACCCAAAAA...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACTTCACATTAAAGATTTaGAGTCCTGGGACACAGTTT +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHFTLKI*SPGTQF
Trigger: AAACTGTGTCCCAGGACTGCAAATCTTTAATGTGAA...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCTTCACATTAAAGATTTaGAGTCCTGGGACACAGTTT +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPFTLKI*SPGTQF
Trigger: AAACTGTGTCCCAGGACTGCAAATCTTTAATGTGAA...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGACTGGCCCCAAAGACTaGTGTTTCAGGCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKTGPKD*CFRRST
Trigger: CGTGGAGCGCCTGAAACACCAGTCTTTGGGGCCAGT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGCATTTAAAGGTTACCTaGATTGAAACTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWHLKVT*IETEAL
Trigger: CAGTGCCTCAGTTTCAATCCAGGTAACCTTTAAATG...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCATTTAAAGGTTACCTaGATTGAAACTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTHLKVT*IETEAL
Trigger: CAGTGCCTCAGTTTCAATCCAGGTAACCTTTAAATG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTCAACCTTGCAGCGAATaGCAGCCTAAGCTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISQPCSE*QPKLGR
Trigger: ACGCCCCAGCTTAGGCTGCCATTCGCTGCAAGGTTG...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR CCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTTTCGTCCAGGGCCCATaGGGGTGTTCAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISFVQGP*GCSTLQ
Trigger: CTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAA...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTATTCGTCCAGGGCCCATaGGGGTGTTCAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVFVQGP*GCSTLQ
Trigger: CTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAA...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTTCGTCCAGGGCCCATaGGGGTGTTCAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKFVQGP*GCSTLQ
Trigger: CTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp AGTGTCTATTTTCTCTGGGCCGATCCTGTGGCCATAGAGCAGAGTATGTTTTCCCCATTTACAGCCACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SVYFLWADPVAIEQSMFSPFTAT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTGGCTGTAAATGG...GGAAAACATACTCTGCTCTATGGCCACAGGATCGGCCCAGAGAAAATAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR CCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCACCCAGTTCCATTGGTaGTTAACTAAGAACTACTTG +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTTQFHW*LTKNYL
Trigger: CAAGTAGTTCTTAGTTAACCACCAATGGAACTGGGT...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCAAAACAGCTCACACCTaGCTGCTCACACAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFKTAHT*LLTQRA
Trigger: GGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTT...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAGCCTACTTTTCATTTTaGGTAGGCGAACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELAYFSF*VGELQP
Trigger: AGGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGC...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCTTTATTTTTGGGTGTTaGGTGCCATGTTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPFIFGC*VPCYFW
Trigger: CCAAAAGTAACATGGCACCCAACACCCAAAAATAAA...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGAACTGGAAACTGTCCTaGGAGAGCCACTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVNWKLS*ESHSRA
Trigger: AGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTT...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATAACTGGAAACTGTCCTaGGAGAGCCACTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDNWKLS*ESHSRA
Trigger: AGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTT...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCAGACTATTCAGCAACTaGAAACTGTCCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSRLFSN*KLSWES
Trigger: GCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCT...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACCTGCCAGAGGTGGCTaGAGGCACTTTATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVPARGG*RHFIAS
Trigger: GCTGGCAATAAAGTGCCTCCAGCCACCTCTGGCAGG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCGAGACCTGCCAGAGGTaGCTGGAGGCACTTTATTGC +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFETCQR*LEALYC
Trigger: GCAATAAAGTGCCTCCAGCCACCTCTGGCAGGTCTC...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGTTCCAGGATCCAGCTaGTCAGGAATGGTGCCAACA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGVPGSS*SGMVPT
Trigger: TGTTGGCACCATTCCTGATCAGCTGGATCCTGGAAC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR TCA 90 bp ATTGCAAACAATGCAGCCGGCCCTTTTGAAACGAGGATTGAAATGAAAGGCCACAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: IANNAAGPFETRIEMKGHKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...GTGGCCTTTCATTTCAATCCTCGTTTCAAAAGGGCCGGCTGCATTGTTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR TCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR TCA 90 bp ACAGCCACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: TATWNLSFSTIITISKDFKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...AAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR TCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCGAAGCTAAAACCAATTaGGTGAATATTCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTEAKTN*VNIHFA
Trigger: GGCAAAGTGAATATTCACTCAATTGGTTTTAGCTTC...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGTTGAATGGCATTCTTaGAGAGTCAGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSVEWHS*RVSQSR
Trigger: CCTACTTTGGCTGACTCTTCAAGAATGCCATTCAAC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGTTAGTGTCTTCGGGTaGTTTAATATCTGCATAACT +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWVSVFG*FNICIT
Trigger: AGTTATGCAGATATTAAATCACCCGAAGACACTAAC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAGTTAGTGTCTTCGGGTaGTTTAATATCTGCATAACT +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGVSVFG*FNICIT
Trigger: AGTTATGCAGATATTAAATCACCCGAAGACACTAAC...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATAACATCAGTCCTCAGTaGTGGGATACGGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDNISPQ*WDTVEH
Trigger: GTGCTCTACCGTATCCCATCACTGAGGACTGATGTT...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAAGTGGAAGAGTGCTTTaGTCTCAGTTGCTAATGATG +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELSGRVL*SQLLMM
Trigger: CATCATTAGCAACTGAGATCAAAGCACTCTTCCACT...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCAAGTCAAAGTGTGATTaGCAGTCGAATCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLKSKCD*QSNLCS
Trigger: AGAGCAAAGATTCGACTGTCAATCACACTTTGACTT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCTCCTGTAACAAGATCTaGCCTGTAAAGATCCCATAT +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLSCNKI*PVKIPY
Trigger: ATATGGGATCTTTACAGGTCAGATCTTGTTACAGGA...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAATCCTGTAACAAGATCTaGCCTGTAAAGATCCCATAT +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAESCNKI*PVKIPY
Trigger: ATATGGGATCTTTACAGGTCAGATCTTGTTACAGGA...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTAGTACTGGGTCATGGTaGAGTTGGAAAGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVSTGSW*SWKVRV
Trigger: AACCCTCACTTTCCAACTTCACCATGACCCAGTACT...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAGGGAAACGGGAGAGATaGAGGCAACACGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAGKRER*RQHAAS
Trigger: AGAAGCAGCGTGTTGCCTTCATCTCTCCCGTTTCCC...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGGAAACGGGAGAGATaGAGGCAACACGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVGKRER*RQHAAS
Trigger: AGAAGCAGCGTGTTGCCTTCATCTCTCCCGTTTCCC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGCTGATCAGGAATGGTaGCAACAAACGGGATTACCG +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLADQEW*QQTGLP
Trigger: CGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTCACCTGGAATCTGTCTaGGTCACTAGGAACATGCCC +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGHLESV*VTRNMP
Trigger: GGGCATGTTCCTAGTGACGCAGACAGATTCCAGGTG...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLEVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTCGGCTCGAGGTTTCATaGTGCTGCCATTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGRLEVS*CCHSAD
Trigger: ATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCG...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTTGCATTACCTCTGCCTaGTTTGTGGGTCCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVCITSA*FVGPLV
Trigger: AACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCA...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAGTAGACAGTTCTGGGTaGGATTTTAGAAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELVDSSG*DFRNVS
Trigger: GGAGACATTTCTAAAATCGCACCCAGAACTGTCTAC...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGAGCAAAAGGCCAACTTaGATTTTAGAGACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRSKRPT*ILETEL
Trigger: AAGCTCTGTCTCTAAAATGCAAGTTGGCCTTTTGCT...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCCATGTTACTTTTGGTaGCTTAATACACCTACTTGG +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRPCYFW*LNTPTW
Trigger: CCAAGTAGGTGTATTAAGGCACCAAAAGTAACATGG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACATGATTGCCGGAAAGTaGAAGGCATTAAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHMIAGK*KALRIK
Trigger: TTTAATTCTTAATGCCTTGCACTTTCCGGCAATCAT...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCTCAGGTTCGATTTGCTaGTTTGATTACTGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLSGSIC*FDYCVS
Trigger: GCTAACACAGTAATCAAAGCAGCAAATCGAACCTGA...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GACTTTGGAACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACATGCTGCTGCCATTCTaGAGATCCACCTGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: DFGTWNLSFSTIITISKDMLLPF*RSTCLR
Trigger: ACGCAGACAGGTGGATCTGCAGAATGGCAGCAGCAT...GTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTTCCAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR GCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTCCAAGTCCAGACAGTaGCAGAAGAGACTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFSKSRQ*QKRLGG
Trigger: GCCTCCAAGTCTCTTCTGGCACTGTCTGGACTTGGA...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCATTTAAAGGTTACCTaGATTGAAACTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRHLKVT*IETEAL
Trigger: CAGTGCCTCAGTTTCAATCCAGGTAACCTTTAAATG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp ATTGCAAACAATGCAGCCGGCCCTTTTGAAACGAGGATTGAAATGAAAGGCCACCCAGCTGATCAGGAATaGTGCCAACAAACGGGATTA +
Preference number: 4 (lower is better)
Translates to: IANNAAGPFETRIEMKGHPADQE*CQQTGL
Trigger: TAATCCCGTTTGTTGGCACCATTCCTGATCAGCTGG...GTGGCCTTTCATTTCAATCCTCGTTTCAAAAGGGCCGGCTGCATTGTTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCCAGCTGATCAGGAATaGTGCCAACAAACGGGATTA +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVPADQE*CQQTGL
Trigger: TAATCCCGTTTGTTGGCACCATTCCTGATCAGCTGG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAAATGGCAGCCTAAGCTaGGGCGTGCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISANGSLS*GVPDFG
Trigger: TCCAAAGTCTGGCACGCCCCAGCTTAGGCTGCCATT...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
CDS-3UTR CCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTTTCGTCCAGGGCCCATaGGGGTGTTCAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIFVQGP*GCSTLQ
Trigger: CTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAA...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVSVYFL*ADPVAI
Trigger: TATGGCCACAGGATCGGCCCAGAGAAAATAGACACT...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPSVYFL*ADPVAI
Trigger: TATGGCCACAGGATCGGCCCAGAGAAAATAGACACT...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGGGGCGTGCCAGACTTTaGAACATTTTCTCTACTTAT +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLGRARL*NIFSTY
Trigger: ATAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCC...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGCTTACTTCCAGTAAGTaGATGTCTCCATTAATTTCC +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWLTSSK*MSPLIS
Trigger: GGAAATTAATGGAGACATCCACTTACTGGAAGTAAG...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGACTTACTTCCAGTAAGTaGATGTCTCCATTAATTTCC +
Preference number: 4 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGLTSSK*MSPLIS
Trigger: GGAAATTAATGGAGACATCCACTTACTGGAAGTAAG...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCTATTACTAGGAAGCTaGGGCGTGCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVLLLGS*GVPDFG
Trigger: TCCAAAGTCTGGCACGCCCCAGCTTCCTAGTAATAG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR CCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTACTATTACTAGGAAGCTaGGGCGTGCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLLLLGS*GVPDFG
Trigger: TCCAAAGTCTGGCACGCCCCAGCTTCCTAGTAATAG...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCAATATTCCTAAATCCTaGCAGAGTTCTGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSNIPKS*QSSAPV
Trigger: GACTGGGGCAGAACTCTGCCAGGATTTAGGAATATT...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGAAAACAGCTCACACCTaGCTGCTCACACAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKKTAHT*LLTQRA
Trigger: GGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCAACTGGAAACTGTCCTaGGAGAGCCACTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSNWKLS*ESHSRA
Trigger: AGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTT...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAAGACTATTCAGCAACTaGAAACTGTCCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPRLFSN*KLSWES
Trigger: GCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCT...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCCGATCTTTTCTTTTGTaGTGGTTTGTGATCATACAA +
Preference number: 4 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPRSFLL*WFVIIQ
Trigger: TTGTATGATCACAAACCACCACAAAAGAAAAGATCG...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR TCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGAAGGCGTGTCATAGGTaGTCTCTTCCCGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQKACHR*SLPVPI
Trigger: AATGGGGACGGGAAGAGATCACCTATGACACGCCTT...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TGGGCCGATCCTGTGGCCATAGAGCAGAGTATGTTTTCCATTTACAGCCACCTGGAAGCTAAAACCAATTaGGTGAATATTCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: WADPVAIEQSMFSIYSHLEAKTN*VNIHFA
Trigger: GGCAAAGTGAATATTCACTCAATTGGTTTTAGCTTC...CAGGTGGCTGTAAATGGAAAACATACTCTGCTCTATGGCCACAGGATCGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR TCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCGAAGCTAAAACCAATTaGGTGAATATTCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLEAKTN*VNIHFA
Trigger: GGCAAAGTGAATATTCACTCAATTGGTTTTAGCTTC...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGGAAGAACGGAGGCCTTaGTTGGTGATTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVEERRP*LVISWE
Trigger: TTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTC...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTGTGCAAGTCAAAGTGTaGTTGACAGTCGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRVQVKV*LTVESL
Trigger: CAAAGATTCGACTGTCAATCACACTTTGACTTGCAC...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGAGTACTGGGTCATGGTaGAGTTGGAAAGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVSTGSW*SWKVRV
Trigger: AACCCTCACTTTCCAACTTCACCATGACCCAGTACT...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCGAGCAAGTTGCGAAGTaGCCACCTCCTGATCATTTG +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSEQVAK*PPPDHL
Trigger: CAAATGATCAGGAGGTGGTCACTTCGCAACTTGCTC...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCGAGCAAGTTGCGAAGTaGCCACCTCCTGATCATTTG +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFEQVAK*PPPDHL
Trigger: CAAATGATCAGGAGGTGGTCACTTCGCAACTTGCTC...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCAACGTGACTAGCAGTTaGTCCAGTCCTCATACAGGC +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFNVTSS*SSPHTG
Trigger: GCCTGTATGAGGACTGGATCAACTGCTAGTCACGTT...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGATTTGGATATAACGTaGCTAGCAGTTGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSDLDIT*LAVDPV
Trigger: GACTGGATCAACTGCTAGTCACGTTATATCCAAATC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAATGTGTTAGCACTGGCTaGAAAACTAAAGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAECVSTG*KTKGEL
Trigger: TAATTCTCCTTTAGTTTTTCAGCCAGTGCTAACACA...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCGCTGATCAGGAATGGTaGCAACAAACGGGATTACCG +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFADQEW*QQTGLP
Trigger: CGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGC...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGCTGATCAGGAATGGTaGCAACAAACGGGATTACCG +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGADQEW*QQTGLP
Trigger: CGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTGCGTCACTAGGAACATaGCCACGTATCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVASLGT*PRITIK
Trigger: TTTGATTGTGATACGTGGGCATGTTCCTAGTGACGC...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGCACCTGGAATCTGTCTaGGTCACTAGGAACATGCCC +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKHLESV*VTRNMP
Trigger: GGGCATGTTCCTAGTGACGCAGACAGATTCCAGGTG...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGCACCTGGAATCTGTCTaGGTCACTAGGAACATGCCC +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQHLESV*VTRNMP
Trigger: GGGCATGTTCCTAGTGACGCAGACAGATTCCAGGTG...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCACACCTGGAATCTGTCTaGGTCACTAGGAACATGCCC +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAHLESV*VTRNMP
Trigger: GGGCATGTTCCTAGTGACGCAGACAGATTCCAGGTG...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCATGCTGCTGCCATTCTaGAGATCCACCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSMLLPF*RSTWNL
Trigger: CAGATTCCAGGTGGATCTGCAGAATGGCAGCAGCAT...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTATGCTGCTGCCATTCTaGAGATCCACCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGMLLPF*RSTWNL
Trigger: CAGATTCCAGGTGGATCTGCAGAATGGCAGCAGCAT...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCATGCTGCTGCCATTCTaGAGATCCACCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFMLLPF*RSTWNL
Trigger: CAGATTCCAGGTGGATCTGCAGAATGGCAGCAGCAT...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAEVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp TACAGCCACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: YSHLEFVLQHHNHDLKRLEVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...AAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGEVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGCGGCTCGAGGTTTCATaGTGCTGCCATTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKRLEVS*CCHSAD
Trigger: ATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCG...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCACGGCTCGAGGTTTCATaGTGCTGCCATTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISARLEVS*CCHSAD
Trigger: ATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCG...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp CACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTTCTCTCGGCTCGAGGTTTCATaGTGCTGCCATTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: HLEFVLQHHNHDLKRLFSRLEVS*CCHSAD
Trigger: ATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCG...AGAGAAAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACGGCTCGAGGTTTCATaGTGCTGCCATTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVRLEVS*CCHSAD
Trigger: ATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTCATTTATCAAAGTATTaGAAACAATGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRHLSKY*KQCSRP
Trigger: GGGCCGGCTGCATTGTTTGCAATACTTTGATAAATG...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGATGTGCTCAGATGTCATaGCAATTACTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRCAQMS*QLLGKA
Trigger: AGCTTTACCAAGTAATTGGCATGACATCTGAGCACA...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGTGTGCTCAGATGTCATaGCAATTACTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLCAQMS*QLLGKA
Trigger: AGCTTTACCAAGTAATTGGCATGACATCTGAGCACA...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCATCTTTCAAATTGAATaGATCTTGCCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTIFQIE*ILPLPE
Trigger: TTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCATGCCTGCCTTATGAATaGCTGAAGTCTAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPCLPYE*LKSNPD
Trigger: GTCAGGATTAGACTTCAGGCATTCATAAGGCAGGCA...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTAAGTATTGCAAACAATaGAGCCGGCCCTGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGKYCKQ*SRPCLR
Trigger: ACGCAGACAGGGCCGGCTGCATTGTTTGCAATACTT...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323938.10
CDS-3UTR GCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIGGVQP*SEWQPL
Trigger: AAGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCC...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTATTCTCGAGTCTTCTTaGCTTCTACAGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVILESS*LLQLSL
Trigger: CAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAAT...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATCACATAAGCCTCTCCTaGCTATCGTATAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDHISLS*LSYRAA
Trigger: TGCAGCTCTATACGATAGGCAGGAGAGGCTTATGTG...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGATGATTGCCGGAAAGTaGAAGGCATTAAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWMIAGK*KALRIK
Trigger: TTTAATTCTTAATGCCTTGCACTTTCCGGCAATCAT...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGTCCGTGGCGCCTCCTaGTTTGTTAATGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGVRGAS*FVNVLH
Trigger: ATGAAGCACATTAACAAAGCAGGAGGCGCCACGGAC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCGTCCGTGGCGCCTCCTaGTTTGTTAATGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSVRGAS*FVNVLH
Trigger: ATGAAGCACATTAACAAAGCAGGAGGCGCCACGGAC...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAACTTTCAGGTTCGATTTaGTGCTTTGATTACTGTGTT +
Preference number: 4 (lower is better)
Translates to: GILIQLPVQACGQGMKAELSGSI*CFDYCV
Trigger: AACACAGTAATCAAAGCAGCAAATCGAACCTGAAAG...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGTTCACATTAAAGATTTaGAGTCCTGGGACACAGTTT +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRFTLKI*SPGTQF
Trigger: AAACTGTGTCCCAGGACTGCAAATCTTTAATGTGAA...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTCTCAGCTTCCTCGTCTaGCTCGGATCCAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LVATDVHSLLHVRCFTWILSFLV*LGSKSR
Trigger: TCTGGACTTGGATCCGAGGCAGACGAGGAAGCTGAG...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTTGAAACTGAGGCACTaGCCCCAAAGACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVLKLRH*PQRLVF
Trigger: AAACACCAGTCTTTGGGGCCAGTGCCTCAGTTTCAA...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATTTGAAACTGAGGCACTaGCCCCAAAGACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDLKLRH*PQRLVF
Trigger: AAACACCAGTCTTTGGGGCCAGTGCCTCAGTTTCAA...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGCATTTAAAGGTTACCTaGATTGAAACTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLHLKVT*IETEAL
Trigger: CAGTGCCTCAGTTTCAATCCAGGTAACCTTTAAATG...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCCAGCTGATCAGGAATaGTGCCAACAAACGGGATTA +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVPADQE*CQQTGL
Trigger: TAATCCCGTTTGTTGGCACCATTCCTGATCAGCTGG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTTCTGCAGATCCACCTaGAATCTGTCTGCGTCACTA +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVFCRST*NLSASL
Trigger: TAGTGACGCAGACAGATTCCAGGTGGATCTGCAGAA...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp AATATTCCACATGAAATAACCCAGGCAAAAATACTCACAAGCTGGGGCGTGCCACCAGACTTTGGAACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: NIPHEITQAKILTSWGVPPDFGT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTTCCAAAGTCTGG...TGGCACGCCCCAGCTTGTGAGTATTTTTGCCTGGGTTATTTCATGTGGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CCA 90 bp GACTTTGGAACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACGGGCGTGCCAGACTTTaGAACCTGGAATTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: DFGTWNLSFSTIITISKDGRARL*NLEFVL
Trigger: AAGGACAAATTCCAGGTTCCAAAGTCTGGCACGCCC...GTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTTCCAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCCATTTACAGCCACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVPFTAT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTGGCTGTAAATGG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATCCATTTACAGCCACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDPFTAT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTGGCTGTAAATGG...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVSVYFL*ADPVAI
Trigger: TATGGCCACAGGATCGGCCCAGAGAAAATAGACACT...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCTTACTTCCAGTAAGTaGATGTCTCCATTAATTTCC +
Preference number: 4 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRLTSSK*MSPLIS
Trigger: GGAAATTAATGGAGACATCCACTTACTGGAAGTAAG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTGTGGGTCCCTTAGTTaGCGTACACTTTCTGATAGT +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVCGSLS*RTLSDS
Trigger: ACTATCAGAAAGTGTACGCCAACTAAGGGACCCACA...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACCCCAGGAAGTGTCATaGACGGTGTCTTCTACCTCT +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVPQEVS*TVSSTS
Trigger: AGAGGTAGAAGACACCGTCCATGACACTTCCTGGGG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352231.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAAATATTCCTAAATCCTaGCAGAGTTCTGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPNIPKS*QSSAPV
Trigger: GACTGGGGCAGAACTCTGCCAGGATTTAGGAATATT...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTGCCTACTTTTCATTTTaGGTAGGCGAACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVAYFSF*VGELQP
Trigger: AGGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGC...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTATACAAAATCCCCACCTaGCTTGTGCTGCCACATAAG +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLYKIPT*LVLPHK
Trigger: CTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTA...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATAGACTATTCAGCAACTaGAAACTGTCCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDRLFSN*KLSWES
Trigger: GCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCT...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGCTCCTGTTTTGAGTTaGGTGGAGGGAGCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVAPVLS*VEGASC
Trigger: GCAACTTGCTCCCTCCACCCAACTCAAAACAGGAGC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGGCTCCTGTTTTGAGTTaGGTGGAGGGAGCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLAPVLS*VEGASC
Trigger: GCAACTTGCTCCCTCCACCCAACTCAAAACAGGAGC...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCATATTCAGTGCTGAGATaGGAGTTTATCCCAAGCGAC +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPYSVLR*EFIPSD
Trigger: GTCGCTTGGGATAAACTCCCATCTCAGCACTGAATA...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ACAGCCACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: TATWNLSFSTIITISKDFKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...AAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR TCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCCTTCATGGCAAGGACTaGGAACACCCAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPLHGKD*EHPAGP
Trigger: AGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAG...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGTTGAATGGCATTCTTaGAGAGTCAGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLVEWHS*RVSQSR
Trigger: CCTACTTTGGCTGACTCTTCAAGAATGCCATTCAAC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLGPLRS*CNACRK
Trigger: TTTTCTACAGGCATTACATCAACTCCTAAGGGGTCC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTAACATCAGTCCTCAGTaGTGGGATACGGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISNISPQ*WDTVEH
Trigger: GTGCTCTACCGTATCCCATCACTGAGGACTGATGTT...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCGTCTGTGTAGACTCTaGTTTGCCCTAAGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVRLCRL*FALSSN
Trigger: ATTTGAACTTAGGGCAAATCAGAGTCTACACAGACG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGAAGAACGGAGGCCTTaGTTGGTGATTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGEERRP*LVISWE
Trigger: TTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAGAAGAACGGAGGCCTTaGTTGGTGATTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAEERRP*LVISWE
Trigger: TTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTC...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAAGTGGAAGAGTGCTTTaGTCTCAGTTGCTAATGATG +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPSGRVL*SQLLMM
Trigger: CATCATTAGCAACTGAGATCAAAGCACTCTTCCACT...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGAAGACTTACAAGGAATaGTGTGAGTGGGCTATTTTT +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLKTYKE*CEWAIF
Trigger: AAAAATAGCCCACTCACATCATTCCTTGTAAGTCTT...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCATTTAGCACCCAAAGCTaGCGCCTCATTTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAFSTQS*RLICTV
Trigger: TACAGTGCAAATGAGGCGTCAGCTTTGGGTGCTAAA...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTTTTAGCACCCAAAGCTaGCGCCTCATTTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGFSTQS*RLICTV
Trigger: TACAGTGCAAATGAGGCGTCAGCTTTGGGTGCTAAA...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCGAAGTGACCACCTCCTaGTCATTTGAGAGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSEVTTS*SFESPF
Trigger: AAACGGACTCTCAAATGATCAGGAGGTGGTCACTTC...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTGAGCAAGTTGCGAAGTaGCCACCTCCTGATCATTTG +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTEQVAK*PPPDHL
Trigger: CAAATGATCAGGAGGTGGTCACTTCGCAACTTGCTC...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGTGTGTTAGCACTGGCTaGAAAACTAAAGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLCVSTG*KTKGEL
Trigger: TAATTCTCCTTTAGTTTTTCAGCCAGTGCTAACACA...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGCTGATCAGGAATGGTaGCAACAAACGGGATTACCG +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVADQEW*QQTGLP
Trigger: CGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCTGATCAGGAATGGTaGCAACAAACGGGATTACCG +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISADQEW*QQTGLP
Trigger: CGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGC...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAATGCTGCTGCCATTCTaGAGATCCACCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAMLLPF*RSTWNL
Trigger: CAGATTCCAGGTGGATCTGCAGAATGGCAGCAGCAT...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAATGCTGCTGCCATTCTaGAGATCCACCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVMLLPF*RSTWNL
Trigger: CAGATTCCAGGTGGATCTGCAGAATGGCAGCAGCAT...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVEVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQEVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACTCGAGGTTTCATGCTaGTGCCATTCTGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVLEVSC*CHSADP
Trigger: TGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTCTCGAGGTTTCATGCTaGTGCCATTCTGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISLEVSC*CHSADP
Trigger: TGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAG...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCATTTATCAAAGTATTaGAAACAATGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVHLSKY*KQCSRP
Trigger: GGGCCGGCTGCATTGTTTGCAATACTTTGATAAATG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTATCACTTTGCCATAAATaGCCAGAGTGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELSLCHK*PECLFS
Trigger: AGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAACTGGCTATAAGTGTTaGTGCCCCCAGTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVTGYKC*CPQFPH
Trigger: ATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCATCTTTCAAATTGAATaGATCTTGCCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLIFQIE*ILPLPE
Trigger: TTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTTGCATTACCTCTGCCTaGTTTGTGGGTCCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGCITSA*FVGPLV
Trigger: AACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCA...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCTGCATTACCTCTGCCTaGTTTGTGGGTCCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSCITSA*FVGPLV
Trigger: AACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCA...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTGTAGACAGTTCTGGGTaGGATTTTAGAAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVVDSSG*DFRNVS
Trigger: GGAGACATTTCTAAAATCGCACCCAGAACTGTCTAC...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTATATACATGGAACTTCTaGCAACTCCCCTCAAATAAT +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELYTWNF*QLPSNN
Trigger: ATTATTTGAGGGGAGTTGGCAGAAGTTCCATGTATA...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGTATACATGGAACTTCTaGCAACTCCCCTCAAATAAT +
Preference number: 4 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLYTWNF*QLPSNN
Trigger: ATTATTTGAGGGGAGTTGGCAGAAGTTCCATGTATA...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCCACATAAGCCTCTCCTaGCTATCGTATAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSHISLS*LSYRAA
Trigger: TGCAGCTCTATACGATAGGCAGGAGAGGCTTATGTG...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTTTATTCAGCTTCCAGTaGAAGCCTGTGGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGLFSFQ*KPVGKE
Trigger: TTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAA...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTACTTTCAGGTTCGATTTaGTGCTTTGATTACTGTGTT +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELLSGSI*CFDYCV
Trigger: AACACAGTAATCAAAGCAGCAAATCGAACCTGAAAG...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTTCTCTTTTGCAGATCCACCTGTCTaGGTCACTAGGAACATGCCC +
Preference number: 4 (lower is better)
Translates to: LEFVLQHHNHDLKRLFSFADPPV*VTRNMP
Trigger: GGGCATGTTCCTAGTGACGCAGACAGGTGGATCTGC...AAAAGAGAAAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCATTTAAGCCATCTGCTTaGATTAAATCACGCAACCCC +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPFKPSA*IKSRNP
Trigger: GGGGTTGCGTGATTTAATGCAAGCAGATGGCTTAAA...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGGAGACTTGGAGGCGCTaGTTTTTGACAGTACACACC +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQETWRR*FLTVHT
Trigger: GGTGTGTACTGTCAAAAAGCAGCGCCTCCAAGTCTC...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS-3UTR CCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTCCAGCTGATCAGGAATaGTGCCAACAAACGGGATTA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGPADQE*CQQTGL
Trigger: TAATCCCGTTTGTTGGCACCATTCCTGATCAGCTGG...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCCCAGCTGATCAGGAATaGTGCCAACAAACGGGATTA +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSPADQE*CQQTGL
Trigger: TAATCCCGTTTGTTGGCACCATTCCTGATCAGCTGG...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCATTCTGCAGATCCACCTaGAATCTGTCTGCGTCACTA +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAFCRST*NLSASL
Trigger: TAGTGACGCAGACAGATTCCAGGTGGATCTGCAGAA...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGSVYFL*ADPVAI
Trigger: TATGGCCACAGGATCGGCCCAGAGAAAATAGACACT...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTATGACAGTGATCACTaGGGAAGGAGTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVYDSDH*GRSCVF
Trigger: GAAGACACAACTCCTTCCCCAGTGATCACTGTCATA...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACTATTACTAGGAAGCTaGGGCGTGCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVLLLGS*GVPDFG
Trigger: TCCAAAGTCTGGCACGCCCCAGCTTCCTAGTAATAG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR CCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTATTTATTTTTGGGTGTTaGGTGCCATGTTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELFIFGC*VPCYFW
Trigger: CCAAAAGTAACATGGCACCCAACACCCAAAAATAAA...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTAGACTATTCAGCAACTaGAAACTGTCCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGRLFSN*KLSWES
Trigger: GCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCT...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATGGTCCCCAGATTGTATaGAAATGCCTAGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDGPQIV*KCLVAL
Trigger: TAATGCCACTAGGCATTTCCATACAATCTGGGGACC...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCCGATCTTTTCTTTTGTaGTGGTTTGTGATCATACAA +
Preference number: 4 (lower is better)
Translates to: YFMARTENTQQDLMVHKLRSFLL*WFVIIQ
Trigger: TTGTATGATCACAAACCACCACAAAAGAAAAGATCG...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTTGAAACTGAGGCACTaGCCCTCCGAAGTTCTACAG +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKLKLRH*PSEVLQ
Trigger: CTGTAGAACTTCGGAGGGCCAGTGCCTCAGTTTCAA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527974.5
CDS-3UTR TCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR TCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKKRGLK*KATSAR
Trigger: TCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTCTCCCCAGGACTCCTaGAGAAAAGAATTTCTTACA +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVSPQDS*RKEFLT
Trigger: TGTAAGAAATTCTTTTCTTCAGGAGTCCTGGGGAGA...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR TCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAGPLRS*CNACRK
Trigger: TTTTCTACAGGCATTACATCAACTCCTAAGGGGTCC...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTATGCCTTATGAATGCCTaGAGTCTAATCCTGACCTTA +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLCLMNA*SLILTL
Trigger: TAAGGTCAGGATTAGACTTCAGGCATTCATAAGGCA...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGGAAGAACGGAGGCCTTaGTTGGTGATTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLEERRP*LVISWE
Trigger: TTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTC...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGGTGCAAGTCAAAGTGTaGTTGACAGTCGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVVQVKV*LTVESL
Trigger: CAAAGATTCGACTGTCAATCACACTTTGACTTGCAC...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR TCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATGTGCAAGTCAAAGTGTaGTTGACAGTCGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDVQVKV*LTVESL
Trigger: CAAAGATTCGACTGTCAATCACACTTTGACTTGCAC...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGGAATGGCAGCCTCTTTaGCACATAGTTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKEWQPL*HIVHRW
Trigger: CCACCTATGAACTATGTGTCAAAGAGGCTGCCATTC...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR TCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTGAATGGCAGCCTCTTTaGCACATAGTTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTEWQPL*HIVHRW
Trigger: CCACCTATGAACTATGTGTCAAAGAGGCTGCCATTC...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTAAGACTTACAAGGAATaGTGTGAGTGGGCTATTTTT +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRKTYKE*CEWAIF
Trigger: AAAAATAGCCCACTCACATCATTCCTTGTAAGTCTT...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATACTCTTTTGATTGAATaGTTGCCGGAAAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDTLLIE*LPESAR
Trigger: CCTTGCACTTTCCGGCAATCATTCAATCAAAAGAGT...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTTTTCACTCTTTTGATTaGATGATTGCCGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVFHSFD*MIAGKC
Trigger: GCACTTTCCGGCAATCATTCAATCAAAAGAGTGAAA...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGCGTCACTAGGAACATaGCCACGTATCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGASLGT*PRITIK
Trigger: TTTGATTGTGATACGTGGGCATGTTCCTAGTGACGC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp TTTGGAACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: FGTWNLSFSTIITISKDFEVSCC*HSADPP
Trigger: AGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTC...AAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR GCA 90 bp GTCATAGGTGATCTCTTCCCGTCCCCATTTTTCATTTATCAAAGTATTGCAAACCTCGAGGTTTCATGCTaGTGCCATTCTGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: VIGDLFPSPFFIYQSIANLEVSC*CHSADP
Trigger: TGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAG...GTTTGCAATACTTTGATAAATGAAAAATGGGGACGGGAAGAGATCACCTATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR GCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCATTTATCAAAGTATTaGAAACAATGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVHLSKY*KQCSRP
Trigger: GGGCCGGCTGCATTGTTTGCAATACTTTGATAAATG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp GAATATTCACTTTGCCATAAATGCCCAGAGTGTCTATTTTCTCTGGGCCGATCCCATTTATCAAAGTATTaGAAACAATGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: EYSLCHKCPECLFSLGRSHLSKY*KQCSRP
Trigger: GGGCCGGCTGCATTGTTTGCAATACTTTGATAAATG...GGATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGCAAAGTGAATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR GCA 90 bp AATATTCCACATGAAATAACCCAGGCAAAAATACTCACAAGCTGGGGCGTGCCACATTTATCAAAGTATTaGAAACAATGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: NIPHEITQAKILTSWGVPHLSKY*KQCSRP
Trigger: GGGCCGGCTGCATTGTTTGCAATACTTTGATAAATG...TGGCACGCCCCAGCTTGTGAGTATTTTTGCCTGGGTTATTTCATGTGGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTGTGTACGCCATTTACTaGAACCTTGAATTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVVYAIY*NLEFSN
Trigger: GTTAGAGAATTCAAGGTTGCAGTAAATGGCGTACAC...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAGTGTACGCCATTTACTaGAACCTTGAATTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPVYAIY*NLEFSN
Trigger: GTTAGAGAATTCAAGGTTGCAGTAAATGGCGTACAC...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTGGCTATAAGTGTTGCTaGCCCCAGTTTCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIGYKCC*PQFPHS
Trigger: TGAATGGGGAAACTGGGGGCAGCAACACTTATAGCC...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCATGTGCTCAGATGTCATaGCAATTACTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPCAQMS*QLLGKA
Trigger: AGCTTTACCAAGTAATTGGCATGACATCTGAGCACA...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGAATCTTTCAAATTGAATaGATCTTGCCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRIFQIE*ILPLPE
Trigger: TTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGCATTACCTCTGCCTaGTTTGTGGGTCCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLCITSA*FVGPLV
Trigger: AACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCA...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTTTTCTGCATTACCTCTaGCTGCTTTGTGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISFLHYL*LLCGSL
Trigger: AAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAA...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTTTTCTGCATTACCTCTaGCTGCTTTGTGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTFLHYL*LLCGSL
Trigger: AAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAA...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCACACATAAGCCTCTCCTaGCTATCGTATAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAHISLS*LSYRAA
Trigger: TGCAGCTCTATACGATAGGCAGGAGAGGCTTATGTG...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCCATGTTACTTTTGGTaGCTTAATACACCTACTTGG +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVPCYFW*LNTPTW
Trigger: CCAAGTAGGTGTATTAAGGCACCAAAAGTAACATGG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGAAGTAGAACATCAGTaGCAAAAGACTATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSEVEHQ*QKTIQQ
Trigger: TTGCTGAATAGTCTTTTGGCACTGATGTTCTACTTC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTTTATTCAGCTTCCAGTaGAAGCCTGTGGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTLFSFQ*KPVGKE
Trigger: TTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAA...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTCTACTCCATGTTAGGTaGTTTACTTGGATTATCTCA +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRLLHVR*FTWIIS
Trigger: TGAGATAATCCAAGTAAAGCACCTAACATGGAGTAG...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTTCAGGTTCGATTTGCTaGTTTGATTACTGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVSGSIC*FDYCVS
Trigger: GCTAACACAGTAATCAAAGCAGCAAATCGAACCTGA...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTTCACATTAAAGATTTaGAGTCCTGGGACACAGTTT +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSFTLKI*SPGTQF
Trigger: AAACTGTGTCCCAGGACTGCAAATCTTTAATGTGAA...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTATACCCAACTACTGCTTaGTTTCCTTATTATAGACAA +
Preference number: 4 (lower is better)
Translates to: PKDYSATGNCPGRATPELYPTTA*FPYYRQ
Trigger: TTGTCTATAATAAGGAAAGCAAGCAGTAGTTGGGTA...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TTTGAAAGGCGTGTCATAGGTGATCTCTTCCCGTCCCCATTTTTCATTTATCAATTGAAACTGAGGCACTaGCCCCAAAGACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: FERRVIGDLFPSPFFIYQLKLRH*PQRLVF
Trigger: AAACACCAGTCTTTGGGGCCAGTGCCTCAGTTTCAA...TTGATAAATGAAAAATGGGGACGGGAAGAGATCACCTATGACACGCCTTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTATTGAAACTGAGGCACTaGCCCCAAAGACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVLKLRH*PQRLVF
Trigger: AAACACCAGTCTTTGGGGCCAGTGCCTCAGTTTCAA...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTCATTTAAAGGTTACCTaGATTGAAACTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVHLKVT*IETEAL
Trigger: CAGTGCCTCAGTTTCAATCCAGGTAACCTTTAAATG...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTATTCTGCAGATCCACCTaGAATCTGTCTGCGTCACTA +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVFCRST*NLSASL
Trigger: TAGTGACGCAGACAGATTCCAGGTGGATCTGCAGAA...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTTCTGCAGATCCACCTaGAATCTGTCTGCGTCACTA +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQFCRST*NLSASL
Trigger: TAGTGACGCAGACAGATTCCAGGTGGATCTGCAGAA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTTTCTGCAGATCCACCTaGAATCTGTCTGCGTCACTA +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTFCRST*NLSASL
Trigger: TAGTGACGCAGACAGATTCCAGGTGGATCTGCAGAA...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTTTCTGCAGATCCACCTaGAATCTGTCTGCGTCACTA +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISFCRST*NLSASL
Trigger: TAGTGACGCAGACAGATTCCAGGTGGATCTGCAGAA...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTTCTGCAGATCCACCTaGAATCTGTCTGCGTCACTA +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKFCRST*NLSASL
Trigger: TAGTGACGCAGACAGATTCCAGGTGGATCTGCAGAA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACCATTTACAGCCACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVPFTAT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTGGCTGTAAATGG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGCCATTTACAGCCACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLPFTAT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTGGCTGTAAATGG...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKSVYFL*ADPVAI
Trigger: TATGGCCACAGGATCGGCCCAGAGAAAATAGACACT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAAGTGTCTATTTTCTCTaGGCCGATCCTGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISASVYFL*ADPVAI
Trigger: TATGGCCACAGGATCGGCCCAGAGAAAATAGACACT...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGGGGCGTGCCAGACTTTaGAACATTTTCTCTACTTAT +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVGRARL*NIFSTY
Trigger: ATAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCC...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCCTTACTTCCAGTAAGTaGATGTCTCCATTAATTTCC +
Preference number: 4 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSLTSSK*MSPLIS
Trigger: GGAAATTAATGGAGACATCCACTTACTGGAAGTAAG...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCAAGATCCCATATACATaGAACTTCTGCCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSKIPYT*NFCQLP
Trigger: GGGGAGTTGGCAGAAGTTCCATGTATATGGGATCTT...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCAATATTCCTAAATCCTaGCAGAGTTCTGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSNIPKS*QSSAPV
Trigger: GACTGGGGCAGAACTCTGCCAGGATTTAGGAATATT...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAAATATTCCTAAATCCTaGCAGAGTTCTGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRANIPKS*QSSAPV
Trigger: GACTGGGGCAGAACTCTGCCAGGATTTAGGAATATT...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAACCCAGTTCCATTGGTaGTTAACTAAGAACTACTTG +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPTQFHW*LTKNYL
Trigger: CAAGTAGTTCTTAGTTAACCACCAATGGAACTGGGT...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTACAAAATCCCCACCTaGCTTGTGCTGCCACATAAG +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQYKIPT*LVLPHK
Trigger: CTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTACAAAATCCCCACCTaGCTTGTGCTGCCACATAAG +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKYKIPT*LVLPHK
Trigger: CTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCGGTCCCCAGATTGTATaGAAATGCCTAGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSGPQIV*KCLVAL
Trigger: TAATGCCACTAGGCATTTCCATACAATCTGGGGACC...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTATTCAGTGCTGAGATaGGAGTTTATCCCAAGCGAC +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFYSVLR*EFIPSD
Trigger: GTCGCTTGGGATAAACTCCCATCTCAGCACTGAATA...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTCTCCCCAGGACTCCTaGAGAAAAGAATTTCTTACA +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFSPQDS*RKEFLT
Trigger: TGTAAGAAATTCTTTTCTTCAGGAGTCCTGGGGAGA...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGTTGAATGGCATTCTTaGAGAGTCAGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVVEWHS*RVSQSR
Trigger: CCTACTTTGGCTGACTCTTCAAGAATGCCATTCAAC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGGTTGAATGGCATTCTTaGAGAGTCAGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQVEWHS*RVSQSR
Trigger: CCTACTTTGGCTGACTCTTCAAGAATGCCATTCAAC...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGGTTGAATGGCATTCTTaGAGAGTCAGCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKVEWHS*RVSQSR
Trigger: CCTACTTTGGCTGACTCTTCAAGAATGCCATTCAAC...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVGPLRS*CNACRK
Trigger: TTTTCTACAGGCATTACATCAACTCCTAAGGGGTCC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQGPLRS*CNACRK
Trigger: TTTTCTACAGGCATTACATCAACTCCTAAGGGGTCC...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAGGACCCCTTAGGAGTTaGTGTAATGCCTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAGPLRS*CNACRK
Trigger: TTTTCTACAGGCATTACATCAACTCCTAAGGGGTCC...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTGTTAGTGTCTTCGGGTaGTTTAATATCTGCATAACT +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVVSVFG*FNICIT
Trigger: AGTTATGCAGATATTAAATCACCCGAAGACACTAAC...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCCGTCTGTGTAGACTCTaGTTTGCCCTAAGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSRLCRL*FALSSN
Trigger: ATTTGAACTTAGGGCAAATCAGAGTCTACACAGACG...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCATGCCTTATGAATGCCTaGAGTCTAATCCTGACCTTA +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRACLMNA*SLILTL
Trigger: TAAGGTCAGGATTAGACTTCAGGCATTCATAAGGCA...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGAAGTCAAAGTGTGATTaGCAGTCGAATCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVKSKCD*QSNLCS
Trigger: AGAGCAAAGATTCGACTGTCAATCACACTTTGACTT...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR TCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGTGCAAGTCAAAGTGTaGTTGACAGTCGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGVQVKV*LTVESL
Trigger: CAAAGATTCGACTGTCAATCACACTTTGACTTGCAC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR TCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAAAGACTTACAAGGAATaGTGTGAGTGGGCTATTTTT +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPKTYKE*CEWAIF
Trigger: AAAAATAGCCCACTCACATCATTCCTTGTAAGTCTT...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTAGATCAGTCCTTTACTaGTTCATTGCTTATCTAAGC +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVRSVLY*FIAYLS
Trigger: GCTTAGATAAGCAATGAATCAGTAAAGGACTGATCT...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCACACCTCCTGATCATTTaGGAGTCCGTTTACAGTGTA +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAHLLII*ESVYSV
Trigger: TACACTGTAAACGGACTCTCAAATGATCAGGAGGTG...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGATTTGGATATAACGTaGCTAGCAGTTGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGDLDIT*LAVDPV
Trigger: GACTGGATCAACTGCTAGTCACGTTATATCCAAATC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCATGTGTTAGCACTGGCTaGAAAACTAAAGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPCVSTG*KTKGEL
Trigger: TAATTCTCCTTTAGTTTTTCAGCCAGTGCTAACACA...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGATAATAACAAGCCAGTaGCCCAATTTAAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVIITSQ*PNLSHL
Trigger: CAGATGGCTTAAATTGGGTCACTGGCTTGTTATTAT...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGGCGTCACTAGGAACATaGCCACGTATCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQASLGT*PRITIK
Trigger: TTTGATTGTGATACGTGGGCATGTTCCTAGTGACGC...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCGTCACTAGGAACATaGCCACGTATCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISASLGT*PRITIK
Trigger: TTTGATTGTGATACGTGGGCATGTTCCTAGTGACGC...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGGCGTCACTAGGAACATaGCCACGTATCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKASLGT*PRITIK
Trigger: TTTGATTGTGATACGTGGGCATGTTCCTAGTGACGC...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAATGCTGCTGCCATTCTaGAGATCCACCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRMLLPF*RSTWNL
Trigger: CAGATTCCAGGTGGATCTGCAGAATGGCAGCAGCAT...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCATCACTTTGCCATAAATaGCCAGAGTGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPSLCHK*PECLFS
Trigger: AGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGTGTACGCCATTTACTaGAACCTTGAATTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLVYAIY*NLEFSN
Trigger: GTTAGAGAATTCAAGGTTGCAGTAAATGGCGTACAC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATGTGTACGCCATTTACTaGAACCTTGAATTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDVYAIY*NLEFSN
Trigger: GTTAGAGAATTCAAGGTTGCAGTAAATGGCGTACAC...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATTGTGCTCAGATGTCATaGCAATTACTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDCAQMS*QLLGKA
Trigger: AGCTTTACCAAGTAATTGGCATGACATCTGAGCACA...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTGCCTGCCTTATGAATaGCTGAAGTCTAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKCLPYE*LKSNPD
Trigger: GTCAGGATTAGACTTCAGGCATTCATAAGGCAGGCA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTGCCTGCCTTATGAATaGCTGAAGTCTAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQCLPYE*LKSNPD
Trigger: GTCAGGATTAGACTTCAGGCATTCATAAGGCAGGCA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGTAGACAGTTCTGGGTaGGATTTTAGAAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGVDSSG*DFRNVS
Trigger: GGAGACATTTCTAAAATCGCACCCAGAACTGTCTAC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR GCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGATTCTCGAGTCTTCTTaGCTTCTACAGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLILESS*LLQLSL
Trigger: CAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAAT...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTTTTTGGGTGTTGGGTaGCATGTTACTTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKFLGVG*HVTFGA
Trigger: GGCACCAAAAGTAACATGGCACCCAACACCCAAAAA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTATGATTGCCGGAAAGTaGAAGGCATTAAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRMIAGK*KALRIK
Trigger: TTTAATTCTTAATGCCTTGCACTTTCCGGCAATCAT...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGTCCGTGGCGCCTCCTaGTTTGTTAATGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPVRGAS*FVNVLH
Trigger: ATGAAGCACATTAACAAAGCAGGAGGCGCCACGGAC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTCTTTCAGGTTCGATTTaGTGCTTTGATTACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVLSGSI*CFDYCV
Trigger: AACACAGTAATCAAAGCAGCAAATCGAACCTGAAAG...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTTACCCAACTACTGCTTaGTTTCCTTATTATAGACAA +
Preference number: 4 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRYPTTA*FPYYRQ
Trigger: TTGTCTATAATAAGGAAAGCAAGCAGTAGTTGGGTA...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCACATGAACACTTCGTATaGATCACAAGCAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAHEHFV*ITSSHH
Trigger: GTGATGGCTGCTTGTGATGCATACGAAGTGTTCATG...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCATTTAAAGGTTACCTaGATTGAAACTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVHLKVT*IETEAL
Trigger: CAGTGCCTCAGTTTCAATCCAGGTAACCTTTAAATG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTCCAGCTGATCAGGAATaGTGCCAACAAACGGGATTA +
Preference number: 4 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIPADQE*CQQTGL
Trigger: TAATCCCGTTTGTTGGCACCATTCCTGATCAGCTGG...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGGGCGTGCCAGACTTTaGAACATTTTCTCTACTTAT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGGRARL*NIFSTY
Trigger: ATAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTATATGACAGTGATCACTaGGGAAGGAGTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVYDSDH*GRSCVF
Trigger: GAAGACACAACTCCTTCCCCAGTGATCACTGTCATA...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTTATGACAGTGATCACTaGGGAAGGAGTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISYDSDH*GRSCVF
Trigger: GAAGACACAACTCCTTCCCCAGTGATCACTGTCATA...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTTATGACAGTGATCACTaGGGAAGGAGTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTYDSDH*GRSCVF
Trigger: GAAGACACAACTCCTTCCCCAGTGATCACTGTCATA...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCAGAAATCAGCTGCCTTaGGCTTGGCATCAAGTTAAT +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSRNQLP*AWHQVN
Trigger: ATTAACTTGATGCCAAGCCCAAGGCAGCTGATTTCT...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCATGTGGGTCCCTTAGTTaGCGTACACTTTCTGATAGT +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISACGSLS*RTLSDS
Trigger: ACTATCAGAAAGTGTACGCCAACTAAGGGACCCACA...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTAAGATCCCATATACATaGAACTTCTGCCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTKIPYT*NFCQLP
Trigger: GGGGAGTTGGCAGAAGTTCCATGTATATGGGATCTT...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGAAGATCCCATATACATaGAACTTCTGCCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKKIPYT*NFCQLP
Trigger: GGGGAGTTGGCAGAAGTTCCATGTATATGGGATCTT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATACCCAGTTCCATTGGTaGTTAACTAAGAACTACTTG +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDTQFHW*LTKNYL
Trigger: CAAGTAGTTCTTAGTTAACCACCAATGGAACTGGGT...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGGGTCCCCAGATTGTATaGAAATGCCTAGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLGPQIV*KCLVAL
Trigger: TAATGCCACTAGGCATTTCCATACAATCTGGGGACC...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGGAAGCTAAAACCAATTaGGTGAATATTCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVEAKTN*VNIHFA
Trigger: GGCAAAGTGAATATTCACTCAATTGGTTTTAGCTTC...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR TCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTCTCCCCAGGACTCCTaGAGAAAAGAATTTCTTACA +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKSPQDS*RKEFLT
Trigger: TGTAAGAAATTCTTTTCTTCAGGAGTCCTGGGGAGA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR TCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTTCTCCCCAGGACTCCTaGAGAAAAGAATTTCTTACA +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTSPQDS*RKEFLT
Trigger: TGTAAGAAATTCTTTTCTTCAGGAGTCCTGGGGAGA...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCACGTCTGTGTAGACTCTaGTTTGCCCTAAGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISARLCRL*FALSSN
Trigger: ATTTGAACTTAGGGCAAATCAGAGTCTACACAGACG...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTTGCCTTATGAATGCCTaGAGTCTAATCCTGACCTTA +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISCLMNA*SLILTL
Trigger: TAAGGTCAGGATTAGACTTCAGGCATTCATAAGGCA...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGAAGAACGGAGGCCTTaGTTGGTGATTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPEERRP*LVISWE
Trigger: TTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGGTGCAAGTCAAAGTGTaGTTGACAGTCGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQVQVKV*LTVESL
Trigger: CAAAGATTCGACTGTCAATCACACTTTGACTTGCAC...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTACTCTTTTGATTGAATaGTTGCCGGAAAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISTLLIE*LPESAR
Trigger: CCTTGCACTTTCCGGCAATCATTCAATCAAAAGAGT...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCATTTCACTCTTTTGATTaGATGATTGCCGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAFHSFD*MIAGKC
Trigger: GCACTTTCCGGCAATCATTCAATCAAAAGAGTGAAA...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTTTCACTCTTTTGATTaGATGATTGCCGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFFHSFD*MIAGKC
Trigger: GCACTTTCCGGCAATCATTCAATCAAAAGAGTGAAA...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATTTTTGTGGTGGTTTGTaGTCATACAAGCAGATTACA +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDFCGGL*SYKQIT
Trigger: TGTAATCTGCTTGTATGATCACAAACCACCACAAAA...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGAAGTGACCACCTCCTaGTCATTTGAGAGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPEVTTS*SFESPF
Trigger: AAACGGACTCTCAAATGATCAGGAGGTGGTCACTTC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGGATTTGGATATAACGTaGCTAGCAGTTGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKDLDIT*LAVDPV
Trigger: GACTGGATCAACTGCTAGTCACGTTATATCCAAATC...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAGATTTGGATATAACGTaGCTAGCAGTTGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISADLDIT*LAVDPV
Trigger: GACTGGATCAACTGCTAGTCACGTTATATCCAAATC...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGACAGCTCCCAAATGGTaGAACTGGTATTCTAAGATG +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKTAPKW*NWYSKM
Trigger: CATCTTAGAATACCAGTTTCACCATTTGGGAGCTGT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAACAGCTCCCAAATGGTaGAACTGGTATTCTAAGATG +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVTAPKW*NWYSKM
Trigger: CATCTTAGAATACCAGTTTCACCATTTGGGAGCTGT...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAACAGCTCCCAAATGGTaGAACTGGTATTCTAAGATG +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISATAPKW*NWYSKM
Trigger: CATCTTAGAATACCAGTTTCACCATTTGGGAGCTGT...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTCACTTTGCCATAAATaGCCAGAGTGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVSLCHK*PECLFS
Trigger: AGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGATGCATTACCTCTGCCTaGTTTGTGGGTCCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRCITSA*FVGPLV
Trigger: AACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCA...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCTTTCTGCATTACCTCTaGCTGCTTTGTGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPFLHYL*LLCGSL
Trigger: AAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAA...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGTAGACAGTTCTGGGTaGGATTTTAGAAATGTCTCC +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVVDSSG*DFRNVS
Trigger: GGAGACATTTCTAAAATCGCACCCAGAACTGTCTAC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACCTTATACATACATCTaGTTCCCCAGGAAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVPYTYI*FPRKCH
Trigger: ATGACACTTCCTGGGGAAGCAGATGTATGTATAAGG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352231.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTCCTTATACATACATCTaGTTCCCCAGGAAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISPYTYI*FPRKCH
Trigger: ATGACACTTCCTGGGGAAGCAGATGTATGTATAAGG...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS-3UTR CCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCTTGAAACTGAGGCACTaGCCCCAAAGACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPLKLRH*PQRLVF
Trigger: AAACACCAGTCTTTGGGGCCAGTGCCTCAGTTTCAA...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TACAGCCACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTCATTTAAAGGTTACCTaGATTGAAACTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: YSHLEFVLQHHNHDLKRLHLKVT*IETEAL
Trigger: CAGTGCCTCAGTTTCAATCCAGGTAACCTTTAAATG...AAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR CCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGACCAGCTGATCAGGAATaGTGCCAACAAACGGGATTA +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRPADQE*CQQTGL
Trigger: TAATCCCGTTTGTTGGCACCATTCCTGATCAGCTGG...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGATTCTGCAGATCCACCTaGAATCTGTCTGCGTCACTA +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRFCRST*NLSASL
Trigger: TAGTGACGCAGACAGATTCCAGGTGGATCTGCAGAA...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGACCATTTACAGCCACCTaGAATTTGTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRPFTAT*NLSFST
Trigger: GGTGCTGAAGGACAAATTCCAGGTGGCTGTAAATGG...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAGGGCGTGCCAGACTTTaGAACATTTTCTCTACTTAT +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAGRARL*NIFSTY
Trigger: ATAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCC...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGGGGCGTGCCAGACTTTaGAACATTTTCTCTACTTAT +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKGRARL*NIFSTY
Trigger: ATAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCC...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCTTACTTCCAGTAAGTaGATGTCTCCATTAATTTCC +
Preference number: 4 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVLTSSK*MSPLIS
Trigger: GGAAATTAATGGAGACATCCACTTACTGGAAGTAAG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTTATGACAGTGATCACTaGGGAAGGAGTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIYDSDH*GRSCVF
Trigger: GAAGACACAACTCCTTCCCCAGTGATCACTGTCATA...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTAGAAATCAGCTGCCTTaGGCTTGGCATCAAGTTAAT +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTRNQLP*AWHQVN
Trigger: ATTAACTTGATGCCAAGCCCAAGGCAGCTGATTTCT...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTTCTCTTTTAAAATACTCACAAGCTaGGGCGTGCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: LEFVLQHHNHDLKRLFSFKILTS*GVPDFG
Trigger: TCCAAAGTCTGGCACGCCCCAGCTTGTGAGTATTTT...AAAAGAGAAAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATCACATAGTTCATAGGTaGTATTTTGGTGCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDHIVHR*YFGASQ
Trigger: TTGACTTGCACCAAAATACCACCTATGAACTATGTG...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCTACAAAATCCCCACCTaGCTTGTGCTGCCACATAAG +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPYKIPT*LVLPHK
Trigger: CTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTA...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp CACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTTCTCTTTCTGCAGATCCACCTaGAATCGGGTTATAGATGAT +
Preference number: 4 (lower is better)
Translates to: HLEFVLQHHNHDLKRLFSFCRST*NRVIDD
Trigger: ATCATCTATAACCCGATTCCAGGTGGATCTGCAGAA...AGAGAAAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR TCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCGAAGCTAAAACCAATTaGGTGAATATTCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSEAKTN*VNIHFA
Trigger: GGCAAAGTGAATATTCACTCAATTGGTTTTAGCTTC...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAGAAGCTAAAACCAATTaGGTGAATATTCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAEAKTN*VNIHFA
Trigger: GGCAAAGTGAATATTCACTCAATTGGTTTTAGCTTC...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTTCTCCCCAGGACTCCTaGAGAAAAGAATTTCTTACA +
Preference number: 4 (lower is better)
Translates to: LVATDVHSLLHVRCFTWISPQDS*RKEFLT
Trigger: TGTAAGAAATTCTTTTCTTCAGGAGTCCTGGGGAGA...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGTTAGTGTCTTCGGGTaGTTTAATATCTGCATAACT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGVSVFG*FNICIT
Trigger: AGTTATGCAGATATTAAATCACCCGAAGACACTAAC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCGTTAGTGTCTTCGGGTaGTTTAATATCTGCATAACT +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFVSVFG*FNICIT
Trigger: AGTTATGCAGATATTAAATCACCCGAAGACACTAAC...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAAAGTCAAAGTGTGATTaGCAGTCGAATCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVKSKCD*QSNLCS
Trigger: AGAGCAAAGATTCGACTGTCAATCACACTTTGACTT...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR TCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTCCTGTAACAAGATCTaGCCTGTAAAGATCCCATAT +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQSCNKI*PVKIPY
Trigger: ATATGGGATCTTTACAGGTCAGATCTTGTTACAGGA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTTTCACTCTTTTGATTaGATGATTGCCGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLFHSFD*MIAGKC
Trigger: GCACTTTCCGGCAATCATTCAATCAAAAGAGTGAAA...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCCCTCATACATTTATATaGTTGAAGTTTTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFPHTFI*LKFWSP
Trigger: TGGGGACCAAAACTTCAATCATATAAATGTATGAGG...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCTTTTGTGGTGGTTTGTaGTCATACAAGCAGATTACA +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSFCGGL*SYKQIT
Trigger: TGTAATCTGCTTGTATGATCACAAACCACCACAAAA...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTTCACTTTGCCATAAATaGCCAGAGTGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGSLCHK*PECLFS
Trigger: AGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCTCACTTTGCCATAAATaGCCAGAGTGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSSLCHK*PECLFS
Trigger: AGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGTGTACGCCATTTACTaGAACCTTGAATTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVVYAIY*NLEFSN
Trigger: GTTAGAGAATTCAAGGTTGCAGTAAATGGCGTACAC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGGTGTACGCCATTTACTaGAACCTTGAATTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKVYAIY*NLEFSN
Trigger: GTTAGAGAATTCAAGGTTGCAGTAAATGGCGTACAC...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR GCA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATCTTTCAAATTGAATaGATCTTGCCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLIFQIE*ILPLPE
Trigger: TTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCATTCTCGAGTCTTCTTaGCTTCTACAGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPILESS*LLQLSL
Trigger: CAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAAT...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAAGCAAAAGGCCAACTTaGATTTTAGAGACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISASKRPT*ILETEL
Trigger: AAGCTCTGTCTCTAAAATGCAAGTTGGCCTTTTGCT...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTAGCAAAAGGCCAACTTaGATTTTAGAGACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISSKRPT*ILETEL
Trigger: AAGCTCTGTCTCTAAAATGCAAGTTGGCCTTTTGCT...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCGAAGTAGAACATCAGTaGCAAAAGACTATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFEVEHQ*QKTIQQ
Trigger: TTGCTGAATAGTCTTTTGGCACTGATGTTCTACTTC...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATATGATTGCCGGAAAGTaGAAGGCATTAAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDMIAGK*KALRIK
Trigger: TTTAATTCTTAATGCCTTGCACTTTCCGGCAATCAT...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCCTACTCCATGTTAGGTaGTTTACTTGGATTATCTCA +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFLLHVR*FTWIIS
Trigger: TGAGATAATCCAAGTAAAGCACCTAACATGGAGTAG...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTCTACTCCATGTTAGGTaGTTTACTTGGATTATCTCA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGLLHVR*FTWIIS
Trigger: TGAGATAATCCAAGTAAAGCACCTAACATGGAGTAG...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGCAGATTGTATGGAAATaGCTAGTGGCATTAAGGATG +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLQIVWK*LVALRM
Trigger: CATCCTTAATGCCACTAGGCATTTCCATACAATCTG...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AGACTTTGGAACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACATTTAAAGGTTACCTaGATTGAAACTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: RLWNLEFVLQHHNHDLKRHLKVT*IETEAL
Trigger: CAGTGCCTCAGTTTCAATCCAGGTAACCTTTAAATG...TCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTTCCAAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CCA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTCACATAGTTCATAGGTaGTATTTTGGTGCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ASITEAILYFGFCSSCVGHIVHR*YFGASQ
Trigger: TTGACTTGCACCAAAATACCACCTATGAACTATGTG...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR CCA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCCACATAGTTCATAGGTaGTATTTTGGTGCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSHIVHR*YFGASQ
Trigger: TTGACTTGCACCAAAATACCACCTATGAACTATGTG...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTTGAAACTGAGGCACTaGCCATCCTTATACATACAT +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKLKLRH*PSLYIH
Trigger: ATGTATGTATAAGGATGGCCAGTGCCTCAGTTTCAA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352231.6
CDS-3UTR CCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTACCCAGTTCCATTGGTaGTTAACTAAGAACTACTTG +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISTQFHW*LTKNYL
Trigger: CAAGTAGTTCTTAGTTAACCACCAATGGAACTGGGT...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGCCTACTTTTCATTTTaGGTAGGCGAACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPAYFSF*VGELQP
Trigger: AGGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTTTATTTTTGGGTGTTaGGTGCCATGTTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFFIFGC*VPCYFW
Trigger: CCAAAAGTAACATGGCACCCAACACCCAAAAATAAA...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 72 bp GCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTaGGTAAAGCTTGCAGCTAATAGAGCCACATGTTTA +
Preference number: 4 (lower is better)
Translates to: ALISVLRCHANY*VKLAANRATCL
Trigger: TAAACATGTGGCTCTATTAGCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGGAAGCTAAAACCAATTaGGTGAATATTCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKEAKTN*VNIHFA
Trigger: GGCAAAGTGAATATTCACTCAATTGGTTTTAGCTTC...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR TCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCTCTCCCCAGGACTCCTaGAGAAAAGAATTTCTTACA +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPSPQDS*RKEFLT
Trigger: TGTAAGAAATTCTTTTCTTCAGGAGTCCTGGGGAGA...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGTTAGTGTCTTCGGGTaGTTTAATATCTGCATAACT +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISVSVFG*FNICIT
Trigger: AGTTATGCAGATATTAAATCACCCGAAGACACTAAC...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGTTAGTGTCTTCGGGTaGTTTAATATCTGCATAACT +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVVSVFG*FNICIT
Trigger: AGTTATGCAGATATTAAATCACCCGAAGACACTAAC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR TCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCTGCCTTATGAATGCCTaGAGTCTAATCCTGACCTTA +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPCLMNA*SLILTL
Trigger: TAAGGTCAGGATTAGACTTCAGGCATTCATAAGGCA...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAACTCTTTTGATTGAATaGTTGCCGGAAAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRTLLIE*LPESAR
Trigger: CCTTGCACTTTCCGGCAATCATTCAATCAAAAGAGT...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAAGATCAGTCCTTTACTaGTTCATTGCTTATCTAAGC +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISARSVLY*FIAYLS
Trigger: GCTTAGATAAGCAATGAATCAGTAAAGGACTGATCT...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTCCTCATACATTTATATaGTTGAAGTTTTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTPHTFI*LKFWSP
Trigger: TGGGGACCAAAACTTCAATCATATAAATGTATGAGG...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTTTTGTGGTGGTTTGTaGTCATACAAGCAGATTACA +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQFCGGL*SYKQIT
Trigger: TGTAATCTGCTTGTATGATCACAAACCACCACAAAA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTTTTTGTGGTGGTTTGTaGTCATACAAGCAGATTACA +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTFCGGL*SYKQIT
Trigger: TGTAATCTGCTTGTATGATCACAAACCACCACAAAA...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTGTGTTAGCACTGGCTaGAAAACTAAAGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: INNRMTVRCVSARPVSQKCVSTG*KTKGEL
Trigger: TAATTCTCCTTTAGTTTTTCAGCCAGTGCTAACACA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGACATTTATCAAAGTATTaGAAACAATGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRHLSKY*KQCSRP
Trigger: GGGCCGGCTGCATTGTTTGCAATACTTTGATAAATG...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTCACTTTGCCATAAATaGCCAGAGTGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLSLCHK*PECLFS
Trigger: AGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CACCTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTTCTCTTCACTTTGCCATAAATaGCCAGAGTGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: HLEFVLQHHNHDLKRLFSSLCHK*PECLFS
Trigger: AGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA...AGAGAAAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR GCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTTCACTTTGCCATAAATaGCCAGAGTGTCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISSLCHK*PECLFS
Trigger: AGAAAATAGACACTCTGGGCATTTATGGCAAAGTGA...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR GCA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTAGCAAAAGGCCAACTTaGATTTTAGAGACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LVATDVHSLLHVRCFTWISKRPT*ILETEL
Trigger: AAGCTCTGTCTCTAAAATGCAAGTTGGCCTTTTGCT...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTGAAGTAGAACATCAGTaGCAAAAGACTATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTEVEHQ*QKTIQQ
Trigger: TTGCTGAATAGTCTTTTGGCACTGATGTTCTACTTC...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGCTTTCAGGTTCGATTTaGTGCTTTGATTACTGTGTT +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLLSGSI*CFDYCV
Trigger: AACACAGTAATCAAAGCAGCAAATCGAACCTGAAAG...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCATACCCAACTACTGCTTaGTTTCCTTATTATAGACAA +
Preference number: 4 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAYPTTA*FPYYRQ
Trigger: TTGTCTATAATAAGGAAAGCAAGCAGTAGTTGGGTA...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACTTACTTCCAGTAAGTaGATGTCTCCATTAATTTCC +
Preference number: 4 (lower is better)
Translates to: KASITEAILYFGFCSSCVLTSSK*MSPLIS
Trigger: GGAAATTAATGGAGACATCCACTTACTGGAAGTAAG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CCA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGCACATAGTTCATAGGTaGTATTTTGGTGCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: IFQIECILPLPETFCRRLHIVHR*YFGASQ
Trigger: TTGACTTGCACCAAAATACCACCTATGAACTATGTG...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTTTTATTTTTGGGTGTTaGGTGCCATGTTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISFIFGC*VPCYFW
Trigger: CCAAAAGTAACATGGCACCCAACACCCAAAAATAAA...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 72 bp TTGCTCTTTTATCCCTTTCAGGTTCGATTTGCTGCTTaGATTACTGTGTTAGCACTGGCTGAAAAACTAAAG +
Preference number: 4 (lower is better)
Translates to: LLFYPFQVRFAA*ITVLALAEKLK
Trigger: CTTTAGTTTTTCAGCCAGTGCTAACACAGTAATCAAAGCAGCAAATCGAACCTGAAAGGGATAAAAGAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGTGTACGCCATTTACTaGAACCTTGAATTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPVYAIY*NLEFSN
Trigger: GTTAGAGAATTCAAGGTTGCAGTAAATGGCGTACAC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAATCTTTCAAATTGAATaGATCTTGCCTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAIFQIE*ILPLPE
Trigger: TTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCCAGATTGTATGGAAATaGCTAGTGGCATTAAGGATG +
Preference number: 4 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPQIVWK*LVALRM
Trigger: CATCCTTAATGCCACTAGGCATTTCCATACAATCTG...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGATCAGGTTCGATTTGCTaGTTTGATTACTGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRSGSIC*FDYCVS
Trigger: GCTAACACAGTAATCAAAGCAGCAAATCGAACCTGA...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTACCCAACTACTGCTTaGTTTCCTTATTATAGACAA +
Preference number: 4 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQYPTTA*FPYYRQ
Trigger: TTGTCTATAATAAGGAAAGCAAGCAGTAGTTGGGTA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCACGATCTTTTCTTTTGTaGTGGTTTGTGATCATACAA +
Preference number: 4 (lower is better)
Translates to: GRSCVFCKLVSSGDLISARSFLL*WFVIIQ
Trigger: TTGTATGATCACAAACCACCACAAAAGAAAAGATCG...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAAAGACTTACAAGGAATaGTGTGAGTGGGCTATTTTT +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRKTYKE*CEWAIF
Trigger: AAAAATAGCCCACTCACATCATTCCTTGTAAGTCTT...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAAGATCAGTCCTTTACTaGTTCATTGCTTATCTAAGC +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRRSVLY*FIAYLS
Trigger: GCTTAGATAAGCAATGAATCAGTAAAGGACTGATCT...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR TCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGACCTCATACATTTATATaGTTGAAGTTTTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRPHTFI*LKFWSP
Trigger: TGGGGACCAAAACTTCAATCATATAAATGTATGAGG...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGATATACATGGAACTTCTaGCAACTCCCCTCAAATAAT +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRYTWNF*QLPSNN
Trigger: ATTATTTGAGGGGAGTTGGCAGAAGTTCCATGTATA...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAGAAGTAGAACATCAGTaGCAAAAGACTATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFREVEHQ*QKTIQQ
Trigger: TTGCTGAATAGTCTTTTGGCACTGATGTTCTACTTC...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGACTACTCCATGTTAGGTaGTTTACTTGGATTATCTCA +
Preference number: 4 (lower is better)
Translates to: KWKSALISVANDDGLIFRLLHVR*FTWIIS
Trigger: TGAGATAATCCAAGTAAAGCACCTAACATGGAGTAG...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 72 bp TCTGTACAGCAGTATCTTACATACATGGTATCCATGTaGCAGATTTCACTCAAAGTTGCTCTATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: SVQQYLTYMVSM*QISLKVALFQE
Trigger: TTCTTGAAATAGAGCAACTTTGAGTGAAATCTGCAACATGGATACCATGTATGTAAGATACTGCTGTACAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
3UTR CAA 72 bp AGGTTTGATTTTAATCACGTAAAGTGGAAGAGTGCTTaGATCTCAGTTGCTAATGATGATGGACTAATCTTT +
Preference number: 4 (lower is better)
Translates to: RFDFNHVKWKSA*ISVANDDGLIF
Trigger: AAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTTTACGTGATTAAAATCAAACCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS GCA 90 bp GTGTTTCAGGCGCTCCACGGAGCAGGTTGTTTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTCTGGCGTCCGTGGGCGGCTACGGGA +
Preference number: 5 (lower is better)
Translates to: VFQALHGAGCLSAAK*RQGSRLWRPWAATG
Trigger: TCCCGTAGCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTGGAGCGCCTGAAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238181.11
CDS GCA 90 bp GTGTTTCAGGCGCTCCACGGAGCAGGTTGTTTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTCTGGCGTCCGTGGGCGGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: VFQALHGAGCLSAAK*RQGSRLWRPWAAGC
Trigger: ACAGCCAGCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTGGAGCGCCTGAAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS GCA 90 bp GTGTTTCAGGCGCTCCACGGAGCAGGTTGTTTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTCTGGCGTCCGTGGGCGGCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: VFQALHGAGCLSAAK*RQGSRLWRPWAAPK
Trigger: CTTCGGAGCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTGGAGCGCCTGAAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481485.5
CDS CCA 90 bp GCAGGTTGTTTGTCAGCAGCTAAGTGCCGTCAGGGTTCCCGGCTCTaGCGTCCGTGGGCGGCTACGGGAAGCGACAGGAGTCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: AGCLSAAKCRQGSRL*RPWAATGSDRSQSS
Trigger: CGAGGACTGACTCCTGTCGCTTCCCGTAGCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAAACAACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238181.11
CDS CCA 90 bp TTGTCAGCAGCTAAGTGCCGTCAGGGTTCCCGGCTCTGGCGTCCGTaGGCGGCTACGGGAAGCGACAGGAGTCAGTCCTCGTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: LSAAKCRQGSRLWRP*AATGSDRSQSSFTS
Trigger: GGAAGTGAACGAGGACTGACTCCTGTCGCTTCCCGTAGCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238181.11
CDS GCA 90 bp GTGTTTCAGGCGCTCCACGGAGCAGGTTGTTTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTCTGGCGTCCGTGGGCGGATCCTTAT +
Preference number: 5 (lower is better)
Translates to: VFQALHGAGCLSAAK*RQGSRLWRPWADPY
Trigger: ATAAGGATCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTGGAGCGCCTGAAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406509.7
ENST00000454943.6
CDS GCA 90 bp CCAGGTCCACGGGGTCAACGCCAGGGTTTTCTCAGCTTCCTCGTCTaGCTCGGATCCAAGTCCAGACAGTGCCAGAAGAGACTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: PGPRGQRQGFLSFLV*LGSKSRQCQKRLGG
Trigger: GCCTCCAAGTCTCTTCTGGCACTGTCTGGACTTGGATCCGAGGCAGACGAGGAAGCTGAGAAAACCCTGGCGTTGACCCCGTGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS-3UTR CAA 90 bp GCTGCTTCTAAAACAGCTCACACCTGGCTGCTCACACAGAGGGCCCAGAAACACGCTGGAGGCACTTTATaGCCAGCCTGGCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: AASKTAHTWLLTQRAQKHAGGTL*PAWRAG
Trigger: GCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAGC...GTGTTTCTGGGCCCTCTGTGTGAGCAGCCAGGTGTGAGCTGTTTTAGAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS TCA 90 bp GCTGAGCCTGGCCGGAGCCTGGGATGTTCCTGCTCCACTCTGGTGTaGCCTCCAGGCAGCTGGTGCTTTATGACGGAATGGTATGGTGTT +
Preference number: 5 (lower is better)
Translates to: AEPGRSLGCSCSTLV*PPGSWCFMTEWYGV
Trigger: AACACCATACCATTCCGTCATAAAGCACCAGCTGCCTGGAGGTCACACCAGAGTGGAGCAGGAACATCCCAGGCTCCGGCCAGGCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529796.1
CDS CCA 90 bp GACAGTTCGTCCAGGGCCCATGGGGGTGTTCAACCTTGCAGCGAATaGCAGCCTCTGAAAAGAAGCCACAGTCAGGACCAAGAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: DSSSRAHGGVQPCSE*QPLKRSHSQDQEAC
Trigger: GCAGGCCTCTTGGTCCTGACTGTGGCTTCTTTTCAGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489586.6
ENST00000525789.1
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAGCTGGAGGCACTTTATaGCCAGCCTGGCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGAGGTL*PAWRAG
Trigger: GCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAGC...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS CCA 90 bp AGGGAGGTGCTGAGGAAATACACAGGAATGGCTCAGAGGCAGGCCTaGTTGACTCTCGAATCCGTCCAGGGACGGCACACAAATGCAGAG +
Preference number: 5 (lower is better)
Translates to: REVLRKYTGMAQRQA*LTLESVQGRHTNAE
Trigger: CTCTGCATTTGTGTGCCGTCCCTGGACGGATTCGAGAGTCAACCAGGCCTGCCTCTGAGCCATTCCTGTGTATTTCCTCAGCACCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366583.6
ENST00000489586.6
CDS-3UTR CAA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAGGTGGAGGGAGCAAGTaGCGAAGTGACCACCTCCTG +
Preference number: 5 (lower is better)
Translates to: GILIQLPVQACGQGMKAEGGGSK*RSDHLL
Trigger: CAGGAGGTGGTCACTTCGCAACTTGCTCCCTCCACC...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCGCTCGAGCTCCTGTTTaGAGTTGGGTGGAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTARAPV*SWVEGA
Trigger: TGCTCCCTCCACCCAACTCAAAACAGGAGCTCGAGC...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS GCA 90 bp GACTCTCGAATCCGTCCAGGGACGGCACACAAATGCAGAGGGGGCTaGTTTGGGCCTCTATTGTGGATACAGGTTACTCGTAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: DSRIRPGTAHKCRGG*FGPLLWIQVTRNSS
Trigger: TGAGCTGTTACGAGTAACCTGTATCCACAATAGAGGCCCAAAGCAGCCCCCTCTGCATTTGTGTGCCGTCCCTGGACGGATTCGAGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366583.6
ENST00000489586.6
CDS GCA 90 bp TTTAACGACGACAGTTCGTCCAGGGCCCATGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTCTGAAAAGAAGCCACAGTCAGGACCAA +
Preference number: 5 (lower is better)
Translates to: FNDDSSSRAHGGVQP*SEWQPLKRSHSQDQ
Trigger: TTGGTCCTGACTGTGGCTTCTTTTCAGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAACTGTCGTCGTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489586.6
ENST00000525789.1
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCACGGAGCAGGTTGTTaGTCAGCAGCTAAGTGCCGT +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTHGAGC*SAAKCR
Trigger: ACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGCACGGAGCAGGTTGTTaGTCAGCAGCTAAGTGCCGT +
Preference number: 5 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWHGAGC*SAAKCR
Trigger: ACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTG...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAGGTGGAGGGAGCAAGTaGCGAAGTGACCACCTCCTG +
Preference number: 5 (lower is better)
Translates to: PKDYSATGNCPGRATPELGGGSK*RSDHLL
Trigger: CAGGAGGTGGTCACTTCGCAACTTGCTCCCTCCACC...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAGCTGGAGGCACTTTATaGCCAGCCTGGCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPAGGTL*PAWRAG
Trigger: GCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAGC...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS TCA 90 bp ATCACGCAACCCCCGAAGTATCCCCAGGGACAGGTCCCGCCAGCATaGACACTTCGTATGCATCACAAGCAGCCATCACTTAAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: ITQPPKYPQGQVPPA*TLRMHHKQPSLKFH
Trigger: GTGAAACTTAAGTGATGGCTGCTTGTGATGCATACGAAGTGTTCATGCTGGCGGGACCTGTCCCTGGGGATACTTCGGGGGTTGCGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGGGGCGTGCCAGACTTaGGAACCTGGAATTTGTCCT +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRGACQT*EPGICP
Trigger: AGGACAAATTCCAGGTTCCAAAGTCTGGCACGCCCC...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000416919.6
CDS-3UTR CAA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAGCTCGAGCTCCTGTTTaGAGTTGGGTGGAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: PKDYSATGNCPGRATPELARAPV*SWVEGA
Trigger: TGCTCCCTCCACCCAACTCAAAACAGGAGCTCGAGC...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS GCA 90 bp CGAAGTATCCCCAGGGACAGGTCCCGCCAGCATGAACACTTCGTATaGATCACAAGCAGCCATCACTTAAGTTTCACGTACGGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: RSIPRDRSRQHEHFV*ITSSHHLSFTYGQR
Trigger: CCTTTGACCGTACGTGAAACTTAAGTGATGGCTGCTTGTGATGCATACGAAGTGTTCATGCTGGCGGGACCTGTCCCTGGGGATACTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS-3UTR CAA 90 bp GCAAAAATACTCACAAGCTGGGGCGTGCCAGACTTTGGAACCTGGAATTTGTCCGGGGCGTGCCAGACTTaGGAACCTGGAATTTGTCCT +
Preference number: 5 (lower is better)
Translates to: AKILTSWGVPDFGTWNLSGACQT*EPGICP
Trigger: AGGACAAATTCCAGGTTCCAAAGTCTGGCACGCCCC...GGACAAATTCCAGGTTCCAAAGTCTGGCACGCCCCAGCTTGTGAGTATTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CAA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTTGGGGGTGTTCAACCTaGCAGCGAATGGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRWGCST*QRMAAS
Trigger: AGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCA...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS GCA 90 bp GAATGGCAGCCTCTGAAAAGAAGCCACAGTCAGGACCAAGAGGCCTaGAGAAAGCGATCTCCAGGGAAAACTCGTGTCCAAAGAACACTA +
Preference number: 5 (lower is better)
Translates to: EWQPLKRSHSQDQEA*RKRSPGKTRVQRTL
Trigger: TAGTGTTCTTTGGACACGAGTTTTCCCTGGAGATCGCTTTCTGCAGGCCTCTTGGTCCTGACTGTGGCTTCTTTTCAGAGGCTGCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366583.6
ENST00000489586.6
ENST00000525789.1
CDS CCA 90 bp CCTCGTCTGCCTCGGATCCAAGTCCAGACAGTGCCAGAAGAGACTTaGAGGCGCTGCTTTTTGACAGTACACACCTATCCTTATACATAC +
Preference number: 5 (lower is better)
Translates to: PRLPRIQVQTVPEET*RRCFLTVHTYPYTY
Trigger: GTATGTATAAGGATAGGTGTGTACTGTCAAAAAGCAGCGCCTCCAAGTCTCTTCTGGCACTGTCTGGACTTGGATCCGAGGCAGACGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS CCA 90 bp TCTGGTGTGACCTCCAGGCAGCTGGTGCTTTATGACGGAATGGTATaGTGTTGTGAAGGGCTACACGGGTTGAGAAGAGAGTCTGATATC +
Preference number: 5 (lower is better)
Translates to: SGVTSRQLVLYDGMV*CCEGLHGLRRESDI
Trigger: GATATCAGACTCTCTTCTCAACCCGTGTAGCCCTTCACAACACCATACCATTCCGTCATAAAGCACCAGCTGCCTGGAGGTCACACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529796.1
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGACCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGACAGCCACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWTATWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAGGGGCGTGCCAGACTTaGGAACATTTTCTCTACTTA +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGGACQT*EHFLYL
Trigger: TAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCCC...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAAGAAGAACGGAGGCCTaGATTGGTGATTTCATGGGA +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGRRTEA*IGDFMG
Trigger: TCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCT...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTGGGGGTGTTCAACCTaGCAGCGAATGGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVWGCST*QRMAAS
Trigger: AGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCA...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCGTGGCGCCTCCTGCTTaGTTAATGTGCTTCATTTCA +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTVAPPA*LMCFIS
Trigger: TGAAATGAAGCACATTAACAAAGCAGGAGGCGCCAC...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGGTGGAGGGAGCAAGTaGCGAAGTGACCACCTCCTG +
Preference number: 5 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLGGGSK*RSDHLL
Trigger: CAGGAGGTGGTCACTTCGCAACTTGCTCCCTCCACC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCTGGAGGCACTTTATaGCCAGCCTGGCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISAGGTL*PAWRAG
Trigger: GCCAGCCCGCCAGGCTGGCAATAAAGTGCCTCCAGC...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS TCA 90 bp GTATTGCAAACAATGCAGCCGGCCCTTTTGAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGAGGTTTCATGCTGCTGCCATTCTGC +
Preference number: 5 (lower is better)
Translates to: VLQTMQPALLKRGLK*KATSARGFMLLPFC
Trigger: GCAGAATGGCAGCAGCATGAAACCTCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTTCAAAAGGGCCGGCTGCATTGTTTGCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000238181.11
ENST00000341872.10
ENST00000352231.6
ENST00000366583.6
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000430527.6
ENST00000434231.6
ENST00000442397.6
ENST00000450372.6
ENST00000454943.6
ENST00000481485.5
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528782.5
ENST00000532826.5
CDS TCA 90 bp AGAAGGGGAAGAATTATAGTTTATAATCTGAAGTCTTGGTTGTGCTaGGCTGAGCCTGGCCGGAGCCTGGGATGTTCCTGCTCCACTCTG +
Preference number: 5 (lower is better)
Translates to: RRGRIIVYNLKSWLC*AEPGRSLGCSCSTL
Trigger: CAGAGTGGAGCAGGAACATCCCAGGCTCCGGCCAGGCTCAGCTCAGCACAACCAAGACTTCAGATTATAAACTATAATTCTTCCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529796.1
CDS-3UTR CAA 90 bp GCCATAAATGCCCAGAGTGTCTATTTTCTCTGGGCCGATCCTGTGGCCATAGAGCCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: AINAQSVYFLWADPVAIEPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...CTCTATGGCCACAGGATCGGCCCAGAGAAAATAGACACTCTGGGCATTTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS-3UTR CAA 90 bp ACCCAGGCAAAAATACTCACAAGCTGGGGCGTGCCAGACTTTGGAACCTGGAATCCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: TQAKILTSWGVPDFGTWNPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...ATTCCAGGTTCCAAAGTCTGGCACGCCCCAGCTTGTGAGTATTTTTGCCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGGGGCGTGCCAGACTTaGGAACATTTTCTCTACTTA +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRGACQT*EHFLYL
Trigger: TAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCCC...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGATGGGTCATGGTGAAGTaGGAAAGTGAGGGTTCAAAT +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGWVMVK*ESEGSN
Trigger: ATTTGAACCCTCACTTTCCAACTTCACCATGACCCA...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGAGCCTACTTTTCATTTaGGGTAGGCGAACTTCAGCC +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRSLLFI*GRRTSA
Trigger: GGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGCT...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCAGCCTACTTTTCATTTaGGGTAGGCGAACTTCAGCC +
Preference number: 5 (lower is better)
Translates to: YFMARTENTQQDLMVHKLSLLFI*GRRTSA
Trigger: GGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGCT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAGTGGCGCCTCCTGCTTaGTTAATGTGCTTCATTTCA +
Preference number: 5 (lower is better)
Translates to: GILIQLPVQACGQGMKAEVAPPA*LMCFIS
Trigger: TGAAATGAAGCACATTAACAAAGCAGGAGGCGCCAC...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCAATCTGGTGACACACTaGAGTTTGCATGCGGCATTT +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTNLVTH*SLHAAF
Trigger: AAATGCCGCATGCAAACTCAAGTGTGTCACCAGATT...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCTCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACG +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTSLNLC*YSRLCT
Trigger: CGTACACAGCCTGGAGTACAAACACAGATTTAAAGA...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAAAATCCCCACCTGGCTaGTGCTGCCACATAAGCCTC +
Preference number: 5 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLKSPPG*CCHISL
Trigger: GAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTT...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTGGTGGAGGGAGCAAGTaGCGAAGTGACCACCTCCTG +
Preference number: 5 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTGGGSK*RSDHLL
Trigger: CAGGAGGTGGTCACTTCGCAACTTGCTCCCTCCACC...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAGCTCGAGCTCCTGTTTaGAGTTGGGTGGAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAARAPV*SWVEGA
Trigger: TGCTCCCTCCACCCAACTCAAAACAGGAGCTCGAGC...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGCTCGAGCTCCTGTTTaGAGTTGGGTGGAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGARAPV*SWVEGA
Trigger: TGCTCCCTCCACCCAACTCAAAACAGGAGCTCGAGC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGACCTTTCTTAGCAGAGTaGATGGAAGGTAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGPFLAE*MEGNSQ
Trigger: TTGGGAATTACCTTCCATCAACTCTGCTAAGAAAGG...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCTTTCACATTAAAGATTaGCAGTCCTGGGACACAGTT +
Preference number: 5 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPFHIKD*QSWDTV
Trigger: AACTGTGTCCCAGGACTGCAAATCTTTAATGTGAAA...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGAATCTGGTGACACACTaGAGTTTGCATGCGGCATTT +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRNLVTH*SLHAAF
Trigger: AAATGCCGCATGCAAACTCAAGTGTGTCACCAGATT...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS GCA 90 bp CACATGTATAATAACAAGCCAGTGACCCAATTTAAGCCATCTGCTTaGATTAAATCACGCAACCCCCGAAGTATCCCCAGGGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: HMYNNKPVTQFKPSA*IKSRNPRSIPRDRS
Trigger: GGACCTGTCCCTGGGGATACTTCGGGGGTTGCGTGATTTAATGCAAGCAGATGGCTTAAATTGGGTCACTGGCTTGTTATTATACATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTCACGGAGCAGGTTGTTaGTCAGCAGCTAAGTGCCGT +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGHGAGC*SAAKCR
Trigger: ACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTG...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGTCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAGTAGAGCAATATCCTTaGATTTTCCTGCTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGVEQYP*IFLLVG
Trigger: ACCTACTAGCAGGAAAATCAAAGGATATTGCTCTAC...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGGTAGAGCAATATCCTTaGATTTTCCTGCTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWVEQYP*IFLLVG
Trigger: ACCTACTAGCAGGAAAATCAAAGGATATTGCTCTAC...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTACAGCCACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRTATWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACG +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRSLNLC*YSRLCT
Trigger: CGTACACAGCCTGGAGTACAAACACAGATTTAAAGA...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCTGTCATGCCAATTACTaGGTAAAGCTTGCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTCHANY*VKLAAN
Trigger: ATTAGCTGCAAGCTTTACCAAGTAATTGGCATGACA...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTGGGGGTGTTCAACCTaGCAGCGAATGGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: INNRMTVRCVSARPVSQKWGCST*QRMAAS
Trigger: AGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR CAA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCATGGGGGTGTTCAACCTaGCAGCGAATGGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAWGCST*QRMAAS
Trigger: AGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCA...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTATGGGGGTGTTCAACCTaGCAGCGAATGGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: KASITEAILYFGFCSSCVWGCST*QRMAAS
Trigger: AGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCA...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000527974.5
CDS-3UTR CAA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCAAGCAAAAGGCCAACTaGCATTTTAGAGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: YFMARTENTQQDLMVHKLKQKAN*HFRDRA
Trigger: AGCTCTGTCTCTAAAATGCAAGTTGGCCTTTTGCTT...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCAAATCCCCACCTGGCTaGTGCTGCCACATAAGCCTC +
Preference number: 5 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFKSPPG*CCHISL
Trigger: GAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTT...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAAAATCCCCACCTGGCTaGTGCTGCCACATAAGCCTC +
Preference number: 5 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAKSPPG*CCHISL
Trigger: GAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTT...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCAAAGTACATTCTCCTTaGTTTCTTAGCTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTKVHSP*FLSSWR
Trigger: CCTCCAAGAGCTAAGAAACAAAGGAGAATGTACTTT...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCCCACCTCCTGATCATTaGAGAGTCCGTTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSPPPDH*RVRLQC
Trigger: ACACTGTAAACGGACTCTCAAATGATCAGGAGGTGG...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTCACATTAAAGATTaGCAGTCCTGGGACACAGTT +
Preference number: 5 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWFHIKD*QSWDTV
Trigger: AACTGTGTCCCAGGACTGCAAATCTTTAATGTGAAA...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAAATCTGGTGACACACTaGAGTTTGCATGCGGCATTT +
Preference number: 5 (lower is better)
Translates to: PKDYSATGNCPGRATPELNLVTH*SLHAAF
Trigger: AAATGCCGCATGCAAACTCAAGTGTGTCACCAGATT...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTACAGCTTTCCCTGTGGCACCCAGACCAGTAGGGCTTTaGTTTCAAAAGCTAACAATA +
Preference number: 5 (lower is better)
Translates to: TLGDSRVFLPSTAFPVAPRPVGL*FQKLTI
Trigger: TATTGTTAGCTTTTGAAACAAAAGCCCTACTGGTCT...GGGTGCCACAGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATCCCCCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGATCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTACAGCCACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVTATWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTACAGCCACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVTATWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTGGGGCGTGCCAGACTTaGGAACATTTTCTCTACTTA +
Preference number: 5 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVGACQT*EHFLYL
Trigger: TAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCCC...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp ACTGGCTATAAGTGTTGCTGCCCCCAGTTTCCCCATTCAGTGCTAGACACCACCCCATTTACTGCAACCTaGAATTCTCTAACATCACAA +
Preference number: 5 (lower is better)
Translates to: TGYKCCCPQFPHSVLDTTPFTAT*NSLTSQ
Trigger: TTGTGATGTTAGAGAATTCAAGGTTGCAGTAAATGG...GGTGGTGTCTAGCACTGAATGGGGAAACTGGGGGCAGCAACACTTATAGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGCCATTTACTGCAACCTaGAATTCTCTAACATCACAA +
Preference number: 5 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWPFTAT*NSLTSQ
Trigger: TTGTGATGTTAGAGAATTCAAGGTTGCAGTAAATGG...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp GGGATTCTTATTCAGCTTCCAGTGCAAGCCTGTGGGCAAGGAATGAAGGCGGAAAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GILIQLPVQACGQGMKAEKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...TTCCGCCTTCATTCCTTGCCCACAGGCTTGCACTGGAAGCTGAATAAGAATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGCTCCATAAATACTTGTaGAATGGCATTCTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWLHKYL*NGILEE
Trigger: CTCTTCAAGAATGCCATTCAACAAGTATTTATGGAG...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGTGTCATGCCAATTACTaGGTAAAGCTTGCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRCHANY*VKLAAN
Trigger: ATTAGCTGCAAGCTTTACCAAGTAATTGGCATGACA...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTAGAAGAACGGAGGCCTaGATTGGTGATTTCATGGGA +
Preference number: 5 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVRRTEA*IGDFMG
Trigger: TCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCT...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGACGTAGAATGTTCGCATaGAGTTTAAAAGCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGRRMFA*SLKAFE
Trigger: TTCAAAGGCTTTTAAACTCAATGCGAACATTCTACG...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGATACATGGTATCCATGTaGCAGATTTCACTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGYMVSM*QISLKV
Trigger: AACTTTGAGTGAAATCTGCAACATGGATACCATGTA...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTACATGGTATCCATGTaGCAGATTTCACTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: RSSSAQKSRSSREQGTYWYMVSM*QISLKV
Trigger: AACTTTGAGTGAAATCTGCAACATGGATACCATGTA...CCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGAAAGTACATTCTCCTTaGTTTCTTAGCTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRKVHSP*FLSSWR
Trigger: CCTCCAAGAGCTAAGAAACAAAGGAGAATGTACTTT...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAAGCTCCTGTTTTGAGTaGGGTGGAGGGAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: KENDVSQHQSSVMGYGRASSCFE*GGGSKL
Trigger: CAACTTGCTCCCTCCACCCAACTCAAAACAGGAGCT...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTAGCTCCTGTTTTGAGTaGGGTGGAGGGAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGSSCFE*GGGSKL
Trigger: CAACTTGCTCCCTCCACCCAACTCAAAACAGGAGCT...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAGAGAATTATATTGTCTaGCTACCAGAATCCATTCCT +
Preference number: 5 (lower is better)
Translates to: KAVRSSSAQKSRSSREQGENYIV*LPESIP
Trigger: AGGAATGGATTCTGGTAGCAAGACAATATAATTCTC...TCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGGTTCGATTTGCTGCTTaGATTACTGTGTTAGCACTG +
Preference number: 5 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLVRFAA*ITVLAL
Trigger: CAGTGCTAACACAGTAATCAAAGCAGCAAATCGAAC...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGTCCTGGGACACAGTTaGGAAAACACTATTTATAAG +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRVLGHS*ENTIYK
Trigger: CTTATAAATAGTGTTTTCCAAACTGTGTCCCAGGAC...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGTTTCACATTAAAGATTaGCAGTCCTGGGACACAGTT +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRFHIKD*QSWDTV
Trigger: AACTGTGTCCCAGGACTGCAAATCTTTAATGTGAAA...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGTGACACACTTGAGTTaGCATGCGGCATTTTATTTT +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRVTHLS*HAAFYF
Trigger: AAAATAAAATGCCGCATGCAAACTCAAGTGTGTCAC...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCAATCTGGTGACACACTaGAGTTTGCATGCGGCATTT +
Preference number: 5 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSNLVTH*SLHAAF
Trigger: AAATGCCGCATGCAAACTCAAGTGTGTCACCAGATT...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS GCA 90 bp GTGATTGACAGTCGAATCTTTGCTCTTGGTGTAGACAGTTCTGGGTaGGATTTTAGAAATGTCTCCTCCTCTATTACTAGGAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VIDSRIFALGVDSSG*DFRNVSSSITRKLG
Trigger: CCCCAGCTTCCTAGTAATAGAGGAGGAGACATTTCTAAAATCGCACCCAGAACTGTCTACACCAAGAGCAAAGATTCGACTGTCAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000525042.1
ENST00000526589.5
ENST00000527974.5
ENST00000529796.1
CDS-3UTR CAA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTCACGGAGCAGGTTGTTaGTCAGCAGCTAAGTGCCGT +
Preference number: 5 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIHGAGC*SAAKCR
Trigger: ACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTG...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCCATTTACTGCAACCTaGAATTCTCTAACATCACAA +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRPFTAT*NSLTSQ
Trigger: TTGTGATGTTAGAGAATTCAAGGTTGCAGTAAATGG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: PKDYSATGNCPGRATPELKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTACAAATTGAATGCATCTaGCCTCTTCCTGAAACTTTC +
Preference number: 5 (lower is better)
Translates to: PKDYSATGNCPGRATPELQIECI*PLPETF
Trigger: GAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTG...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CCAGTTTCCCCATTCAGTGCTAGACACCACCATACTTCATGGCAAGGACTGAGAAAGTGGAAGAGTGCTTaGATCTCAGTTGCTAATGAT +
Preference number: 5 (lower is better)
Translates to: PVSPFSARHHHTSWQGLRKWKSA*ISVAND
Trigger: ATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT...TCTCAGTCCTTGCCATGAAGTATGGTGGTGTCTAGCACTGAATGGGGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGATTCTCGAGTCTTCTaGCCTTCTACAGCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLDSRVF*PSTAFP
Trigger: AGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGCGTAGAATGTTCGCATaGAGTTTAAAAGCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRRRMFA*SLKAFE
Trigger: TTCAAAGGCTTTTAAACTCAATGCGAACATTCTACG...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTGGGTCATGGTGAAGTaGGAAAGTGAGGGTTCAAAT +
Preference number: 5 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVWVMVK*ESEGSN
Trigger: ATTTGAACCCTCACTTTCCAACTTCACCATGACCCA...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGTACATGGTATCCATGTaGCAGATTTCACTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRYMVSM*QISLKV
Trigger: AACTTTGAGTGAAATCTGCAACATGGATACCATGTA...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TACTTCATGGCAAGGACTGAGAACACCCAGCAGGACCTAATGGTGCACAAGCTCTCACGATCTTTTCTTTaGTGGTGGTTTGTGATCATA +
Preference number: 5 (lower is better)
Translates to: YFMARTENTQQDLMVHKLSRSFL*WWFVII
Trigger: TATGATCACAAACCACCACAAAAGAAAAGATCGTGA...GAGCTTGTGCACCATTAGGTCCTGCTGGGTGTTCTCAGTCCTTGCCATGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGAGCTCCTGTTTTGAGTaGGGTGGAGGGAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: INNRMTVRCVSARPVSQKSSCFE*GGGSKL
Trigger: CAACTTGCTCCCTCCACCCAACTCAAAACAGGAGCT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAAGCTCCTGTTTTGAGTaGGGTGGAGGGAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: KASITEAILYFGFCSSCVSSCFE*GGGSKL
Trigger: CAACTTGCTCCCTCCACCCAACTCAAAACAGGAGCT...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGTTCGATTTGCTGCTTaGATTACTGTGTTAGCACTG +
Preference number: 5 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSVRFAA*ITVLAL
Trigger: CAGTGCTAACACAGTAATCAAAGCAGCAAATCGAAC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAAAGCAGTGCGCAGCAGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGAGACCAGTAGGGCTTTaGTTTCAAAAGCTAACAATA +
Preference number: 5 (lower is better)
Translates to: KKQCAAVAHRRVEAQENRRPVGL*FQKLTI
Trigger: TATTGTTAGCTTTTGAAACAAAAGCCCTACTGGTCT...CCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACTGCTGCGCACTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTAGTGCCAGAAGAGACTaGGAGGCGCTGCTTTTTGAC +
Preference number: 5 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISSARRD*EALLFD
Trigger: GTCAAAAAGCAGCGCCTCCAAGTCTCTTCTGGCACT...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS CCA 90 bp CTGCTCACTAATGAGGACTCAACCTGTCCCTCTCCAAAACCTACCTaGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTT +
Preference number: 5 (lower is better)
Translates to: LLTNEDSTCPSPKPT*NLSFSTIITISKDF
Trigger: AAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTAGGTTTTGGAGAGGGACAGGTTGAGTCCTCATTAGTGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532826.5
CDS-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGACACGGAGCAGGTTGTTaGTCAGCAGCTAAGTGCCGT +
Preference number: 5 (lower is better)
Translates to: KWKSALISVANDDGLIFRHGAGC*SAAKCR
Trigger: ACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTG...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTCCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCATCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTACAGCCACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGTATWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGGGGCGTGCCAGACTTaGGAACATTTTCTCTACTTA +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGGACQT*EHFLYL
Trigger: TAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCCC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGCCATTTACTGCAACCTaGAATTCTCTAACATCACAA +
Preference number: 5 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLPFTAT*NSLTSQ
Trigger: TTGTGATGTTAGAGAATTCAAGGTTGCAGTAAATGG...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACG +
Preference number: 5 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVSLNLC*YSRLCT
Trigger: CGTACACAGCCTGGAGTACAAACACAGATTTAAAGA...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAGATTCTCGAGTCTTCTaGCCTTCTACAGCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: KENDVSQHQSSVMGYGRADSRVF*PSTAFP
Trigger: AGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATC...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCGATTCTCGAGTCTTCTaGCCTTCTACAGCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSDSRVF*PSTAFP
Trigger: AGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATC...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCAGTGGCGCCTCCTGCTTaGTTAATGTGCTTCATTTCA +
Preference number: 5 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAVAPPA*LMCFIS
Trigger: TGAAATGAAGCACATTAACAAAGCAGGAGGCGCCAC...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCTGTCACGATCTTTTCTTTaGTGGTGGTTTGTGATCATA +
Preference number: 5 (lower is better)
Translates to: SLLYKIPTWLVLPHKPLLSRSFL*WWFVII
Trigger: TATGATCACAAACCACCACAAAAGAAAAGATCGTGA...CAGGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CCAAAAGACTATTCAGCAACTGGAAACTGTCCTGGGAGAGCCACTCCAGAGCTAGAGAATTATATTGTCTaGCTACCAGAATCCATTCCT +
Preference number: 5 (lower is better)
Translates to: PKDYSATGNCPGRATPELENYIV*LPESIP
Trigger: AGGAATGGATTCTGGTAGCAAGACAATATAATTCTC...TAGCTCTGGAGTGGCTCTCCCAGGACAGTTTCCAGTTGCTGAATAGTCTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TATCACTTCTTTACAAAATCCCCACCTGGCTTGTGCTGCCACATAAGCCTCTCCGTGACACACTTGAGTTaGCATGCGGCATTTTATTTT +
Preference number: 5 (lower is better)
Translates to: YHFFTKSPPGLCCHISLSVTHLS*HAAFYF
Trigger: AAAATAAAATGCCGCATGCAAACTCAAGTGTGTCAC...GGAGAGGCTTATGTGGCAGCACAAGCCAGGTGGGGATTTTGTAAAGAAGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCATGGAGGCGCTGCTTTTaGACAGTACACACCTATCCT +
Preference number: 5 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAWRRCF*TVHTYP
Trigger: AGGATAGGTGTGTACTGTCAAAAAGCAGCGCCTCCA...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTACCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: KASITEAILYFGFCSSCVPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGCCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp AATATTCCACATGAAATAACCCAGGCAAAAATACTCACAAGCTGGGGCGTGCCATTTGGAACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: NIPHEITQAKILTSWGVPFGTWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTTCCAAA...TGGCACGCCCCAGCTTGTGAGTATTTTTGCCTGGGTTATTTCATGTGGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CAA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGACAGCCACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQTATWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGACAGCCACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: INNRMTVRCVSARPVSQKTATWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAACAGCCACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: KASITEAILYFGFCSSCVTATWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTGGCTGT...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAGGGGCGTGCCAGACTTaGGAACATTTTCTCTACTTA +
Preference number: 5 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAGACQT*EHFLYL
Trigger: TAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCCC...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGGGGCGTGCCAGACTTaGGAACATTTTCTCTACTTA +
Preference number: 5 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISGACQT*EHFLYL
Trigger: TAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCCC...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGGGGGCGTGCCAGACTTaGGAACATTTTCTCTACTTA +
Preference number: 5 (lower is better)
Translates to: INNRMTVRCVSARPVSQKGACQT*EHFLYL
Trigger: TAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCCC...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGGGCGTGCCAGACTTaGGAACATTTTCTCTACTTA +
Preference number: 5 (lower is better)
Translates to: KASITEAILYFGFCSSCVGACQT*EHFLYL
Trigger: TAAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCCC...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTATCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACG +
Preference number: 5 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLSLNLC*YSRLCT
Trigger: CGTACACAGCCTGGAGTACAAACACAGATTTAAAGA...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTGTCATGCCAATTACTaGGTAAAGCTTGCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVCHANY*VKLAAN
Trigger: ATTAGCTGCAAGCTTTACCAAGTAATTGGCATGACA...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGAGAAGAACGGAGGCCTaGATTGGTGATTTCATGGGA +
Preference number: 5 (lower is better)
Translates to: IFQIECILPLPETFCRRLRRTEA*IGDFMG
Trigger: TCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCT...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAAAGCAAAAGGCCAACTaGCATTTTAGAGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLKQKAN*HFRDRA
Trigger: AGCTCTGTCTCTAAAATGCAAGTTGGCCTTTTGCTT...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTTGGGTCATGGTGAAGTaGGAAAGTGAGGGTTCAAAT +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGWVMVK*ESEGSN
Trigger: ATTTGAACCCTCACTTTCCAACTTCACCATGACCCA...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTAGCCTACTTTTCATTTaGGGTAGGCGAACTTCAGCC +
Preference number: 5 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTSLLFI*GRRTSA
Trigger: GGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGCT...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTGTGGCGCCTCCTGCTTaGTTAATGTGCTTCATTTCA +
Preference number: 5 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTVAPPA*LMCFIS
Trigger: TGAAATGAAGCACATTAACAAAGCAGGAGGCGCCAC...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CAAAACAGATTTCTGCATTACCTCTGCCTGCTTTGTGGGTCCCTTAGTTGGCGTTATATGATTGAAGTTTaGGTCCCCAGATTGTATGGA +
Preference number: 5 (lower is better)
Translates to: QNRFLHYLCLLCGSLSWRYMIEV*VPRLYG
Trigger: TCCATACAATCTGGGGACCAAAACTTCAATCATATA...ACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAGAAATCTGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTCCACCTCCTGATCATTaGAGAGTCCGTTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISPPPDH*RVRLQC
Trigger: ACACTGTAAACGGACTCTCAAATGATCAGGAGGTGG...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCCTTTCTTAGCAGAGTaGATGGAAGGTAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVPFLAE*MEGNSQ
Trigger: TTGGGAATTACCTTCCATCAACTCTGCTAAGAAAGG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTGTCCTGGGACACAGTTaGGAAAACACTATTTATAAG +
Preference number: 5 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVVLGHS*ENTIYK
Trigger: CTTATAAATAGTGTTTTCCAAACTGTGTCCCAGGAC...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAGTAGAGCAATATCCTTaGATTTTCCTGCTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLVEQYP*IFLLVG
Trigger: ACCTACTAGCAGGAAAATCAAAGGATATTGCTCTAC...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGGTAGAGCAATATCCTTaGATTTTCCTGCTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVVEQYP*IFLLVG
Trigger: ACCTACTAGCAGGAAAATCAAAGGATATTGCTCTAC...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCCATTTACTGCAACCTaGAATTCTCTAACATCACAA +
Preference number: 5 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVPFTAT*NSLTSQ
Trigger: TTGTGATGTTAGAGAATTCAAGGTTGCAGTAAATGG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTCCATTTACTGCAACCTaGAATTCTCTAACATCACAA +
Preference number: 5 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVPFTAT*NSLTSQ
Trigger: TTGTGATGTTAGAGAATTCAAGGTTGCAGTAAATGG...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACG +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGSLNLC*YSRLCT
Trigger: CGTACACAGCCTGGAGTACAAACACAGATTTAAAGA...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTCTCCATAAATACTTGTaGAATGGCATTCTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVLHKYL*NGILEE
Trigger: CTCTTCAAGAATGCCATTCAACAAGTATTTATGGAG...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTACAAATTGAATGCATCTaGCCTCTTCCTGAAACTTTC +
Preference number: 5 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLQIECI*PLPETF
Trigger: GAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTG...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GATCACTGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAAAGTGGAAGAGTGCTTaGATCTCAGTTGCTAATGAT +
Preference number: 5 (lower is better)
Translates to: DHWGRSCVFCKLVSSGDLKWKSA*ISVAND
Trigger: ATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT...TAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTGATTCTCGAGTCTTCTaGCCTTCTACAGCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIDSRVF*PSTAFP
Trigger: AGGGAAAGCTGTAGAAGGCAAGAAGACTCGAGAATC...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGGGTCATGGTGAAGTaGGAAAGTGAGGGTTCAAAT +
Preference number: 5 (lower is better)
Translates to: IFQIECILPLPETFCRRLWVMVK*ESEGSN
Trigger: ATTTGAACCCTCACTTTCCAACTTCACCATGACCCA...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AGTAGCGCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTACATGGTATCCATGTaGCAGATTTCACTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: SSAQKSRSSREQGTYWFVYMVSM*QISLKV
Trigger: AACTTTGAGTGAAATCTGCAACATGGATACCATGTA...AACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGCGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACTGGTTTCACGATCTTTTCTTTaGTGGTGGTTTGTGATCATA +
Preference number: 5 (lower is better)
Translates to: NDVSQHQSSVMGYGRALVSRSFL*WWFVII
Trigger: TATGATCACAAACCACCACAAAAGAAAAGATCGTGA...AACCAGTGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTCCTTTCTTAGCAGAGTaGATGGAAGGTAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGPFLAE*MEGNSQ
Trigger: TTGGGAATTACCTTCCATCAACTCTGCTAAGAAAGG...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GCACAGAAGAGTCGAAGCTCAAGAGAACAGGGAACATACTGGTTTGTTTCACCAGAGAATTATATTGTCTaGCTACCAGAATCCATTCCT +
Preference number: 5 (lower is better)
Translates to: AQKSRSSREQGTYWFVSPENYIV*LPESIP
Trigger: AGGAATGGATTCTGGTAGCAAGACAATATAATTCTC...TGGTGAAACAAACCAGTATGTTCCCTGTTCTCTTGAGCTTCGACTCTTCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGACCAGCTTCTTGTCGATaGGAGTCTCTTCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: KWKSALISVANDDGLIFRPASCR*ESLLCM
Trigger: CATACACAGAAGAGACTCCAATCGACAAGAAGCTGG...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGTCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: INNRMTVRCVSARPVSQKSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTATCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: KASITEAILYFGFCSSCVSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTTTGGAACCTGGAATTaGTCCTTCAGCACCATAATC +
Preference number: 5 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQFGTWN*SFSTII
Trigger: GATTATGGTGCTGAAGGACAAATTCCAGGTTCCAAA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416919.6
CDS-3UTR CAA 90 bp GCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTAGGTGTAGAGCAATATCCTTaGATTTTCCTGCTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: ASITEAILYFGFCSSCVGVEQYP*IFLLVG
Trigger: ACCTACTAGCAGGAAAATCAAAGGATATTGCTCTAC...ACCTACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCCATTTACTGCAACCTaGAATTCTCTAACATCACAA +
Preference number: 5 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVPFTAT*NSLTSQ
Trigger: TTGTGATGTTAGAGAATTCAAGGTTGCAGTAAATGG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACG +
Preference number: 5 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISSLNLC*YSRLCT
Trigger: CGTACACAGCCTGGAGTACAAACACAGATTTAAAGA...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTATCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACG +
Preference number: 5 (lower is better)
Translates to: KASITEAILYFGFCSSCVSLNLC*YSRLCT
Trigger: CGTACACAGCCTGGAGTACAAACACAGATTTAAAGA...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCTCCATAAATACTTGTaGAATGGCATTCTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVLHKYL*NGILEE
Trigger: CTCTTCAAGAATGCCATTCAACAAGTATTTATGGAG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp AATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTGTAGACTCTGATCTCCATAAATACTTGTaGAATGGCATTCTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: NASCLFLKLSVGVCVDSDLHKYL*NGILEE
Trigger: CTCTTCAAGAATGCCATTCAACAAGTATTTATGGAG...ATCAGAGTCTACACAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TGCCTTAATTTCTGTGCTCAGATGTCATGCCAATTACTTGGTAAAGCTTGCAGCCAAATTGAATGCATCTaGCCTCTTCCTGAAACTTTC +
Preference number: 5 (lower is better)
Translates to: CLNFCAQMSCQLLGKACSQIECI*PLPETF
Trigger: GAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTG...GCTGCAAGCTTTACCAAGTAATTGGCATGACATCTGAGCACAGAAATTAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAAGAAGAACGGAGGCCTaGATTGGTGATTTCATGGGA +
Preference number: 5 (lower is better)
Translates to: KWKSALISVANDDGLIFRRRTEA*IGDFMG
Trigger: TCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCT...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GCAAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGCGTAGAATGTTCGCATaGAGTTTAAAAGCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: ARPVSQKPFCILVFVAAVRRMFA*SLKAFE
Trigger: TTCAAAGGCTTTTAAACTCAATGCGAACATTCTACG...CACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTTATCCTTTGTTCTTTaGGGAAACGGGAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFLSFVL*GNGRDE
Trigger: TTCATCTCTCCCGTTTCCCAAAAGAACAAAGGATAA...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAAGCCTACTTTTCATTTaGGGTAGGCGAACTTCAGCC +
Preference number: 5 (lower is better)
Translates to: KWKSALISVANDDGLIFRSLLFI*GRRTSA
Trigger: GGCTGAAGTTCGCCTACCCAAAATGAAAAGTAGGCT...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGACCACCTCCTGATCATTaGAGAGTCCGTTTACAGTGT +
Preference number: 5 (lower is better)
Translates to: KWKSALISVANDDGLIFRPPPDH*RVRLQC
Trigger: ACACTGTAAACGGACTCTCAAATGATCAGGAGGTGG...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCACCTTTCTTAGCAGAGTaGATGGAAGGTAATTCCCAA +
Preference number: 5 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAPFLAE*MEGNSQ
Trigger: TTGGGAATTACCTTCCATCAACTCTGCTAAGAAAGG...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GTCATAGGTGATCTCTTCCCGTCCCCATTTTTCATTTATCAAAGTATTGCAAACTCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: VIGDLFPSPFFIYQSIANSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...GTTTGCAATACTTTGATAAATGAAAAATGGGGACGGGAAGAGATCACCTATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS-3UTR CAA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGTAGAGCAATATCCTTaGATTTTCCTGCTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISVEQYP*IFLLVG
Trigger: ACCTACTAGCAGGAAAATCAAAGGATATTGCTCTAC...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGGTAGAGCAATATCCTTaGATTTTCCTGCTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQVEQYP*IFLLVG
Trigger: ACCTACTAGCAGGAAAATCAAAGGATATTGCTCTAC...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAAGAAAATGATGTCAGTCAACATCAGTCCTCAGTGATGGGATACGGTAGAGCACCATTTACTGCAACCTaGAATTCTCTAACATCACAA +
Preference number: 5 (lower is better)
Translates to: KENDVSQHQSSVMGYGRAPFTAT*NSLTSQ
Trigger: TTGTGATGTTAGAGAATTCAAGGTTGCAGTAAATGG...TGCTCTACCGTATCCCATCACTGAGGACTGATGTTGACTGACATCATTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
CDS-3UTR CAA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGAAGCCATTCTGTATTTaGGTTTTTGTAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: INNRMTVRCVSARPVSQKKPFCI*VFVAAV
Trigger: CACAGCTGCTACAAAAACCAAAATACAGAATGGCTT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
CDS-3UTR CAA 90 bp AAGGCCAGTATCACAGAAGCCATTCTGTATTTTGGTTTTTGTAGCAGCTGTGTATGTCATGCCAATTACTaGGTAAAGCTTGCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: KASITEAILYFGFCSSCVCHANY*VKLAAN
Trigger: ATTAGCTGCAAGCTTTACCAAGTAATTGGCATGACA...TACACAGCTGCTACAAAAACCAAAATACAGAATGGCTTCTGTGATACTGGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTCAAATTGAATGCATCTaGCCTCTTCCTGAAACTTTC +
Preference number: 5 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISQIECI*PLPETF
Trigger: GAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTG...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAAAGTGGAAGAGTGCTTaGATCTCAGTTGCTAATGAT +
Preference number: 5 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAKWKSA*ISVAND
Trigger: ATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTTATCCTTTGTTCTTTaGGGAAACGGGAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: IFQIECILPLPETFCRRLLSFVL*GNGRDE
Trigger: TTCATCTCTCCCGTTTCCCAAAAGAACAAAGGATAA...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGTTATCCTTTGTTCTTTaGGGAAACGGGAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQLSFVL*GNGRDE
Trigger: TTCATCTCTCCCGTTTCCCAAAAGAACAAAGGATAA...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GTAAATGTTATTATTAAGGGAGGGGTGGTGGAGCAAGTAGATCAGTCCTTTACTAAAGTACATTCTCCTTaGTTTCTTAGCTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: VNVIIKGGVVEQVDQSFTKVHSP*FLSSWR
Trigger: CCTCCAAGAGCTAAGAAACAAAGGAGAATGTACTTT...AGTAAAGGACTGATCTACTTGCTCCACCACCCCTCCCTTAATAATAACATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATGGTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCTTCTTGCCTTCTATATGATTGAAGTTTaGGTCCCCAGATTGTATGGA +
Preference number: 5 (lower is better)
Translates to: MVFMEKNNSGGFSSLLAFYMIEV*VPRLYG
Trigger: TCCATACAATCTGGGGACCAAAACTTCAATCATATA...GAAGGCAAGAAGACTCGAGAATCCCCCAGAGTTATTTTTCTCCATAAAGACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTGTTCGATTTGCTGCTTaGATTACTGTGTTAGCACTG +
Preference number: 5 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIVRFAA*ITVLAL
Trigger: CAGTGCTAACACAGTAATCAAAGCAGCAAATCGAAC...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATCTTTCAAATTGAATGCATCTTGCCTCTTCCTGAAACTTTCTGTAGGCGTCTGTTTCACATTAAAGATTaGCAGTCCTGGGACACAGTT +
Preference number: 5 (lower is better)
Translates to: IFQIECILPLPETFCRRLFHIKD*QSWDTV
Trigger: AACTGTGTCCCAGGACTGCAAATCTTTAATGTGAAA...CAGACGCCTACAGAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTGAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTGCAGTGACACACTTGAGTTaGCATGCGGCATTTTATTTT +
Preference number: 5 (lower is better)
Translates to: GRSCVFCKLVSSGDLISAVTHLS*HAAFYF
Trigger: AAAATAAAATGCCGCATGCAAACTCAAGTGTGTCAC...TGCAGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CTGGAATTTGTCCTTCAGCACCATAATCACGATCTCAAAAGACTTTTCTCTTTTTCATTTATCAAAGTATaGCAAACAATGCAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: LEFVLQHHNHDLKRLFSFSFIKV*QTMQPA
Trigger: GGCCGGCTGCATTGTTTGCAATACTTTGATAAATGA...AAAAGAGAAAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434231.6
ENST00000442397.6
CDS-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGATCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACG +
Preference number: 5 (lower is better)
Translates to: KWKSALISVANDDGLIFRSLNLC*YSRLCT
Trigger: CGTACACAGCCTGGAGTACAAACACAGATTTAAAGA...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTTGTCATGCCAATTACTaGGTAAAGCTTGCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: LVATDVHSLLHVRCFTWICHANY*VKLAAN
Trigger: ATTAGCTGCAAGCTTTACCAAGTAATTGGCATGACA...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTCAAATTGAATGCATCTaGCCTCTTCCTGAAACTTTC +
Preference number: 5 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIQIECI*PLPETF
Trigger: GAAAGTTTCAGGAAGAGGCAAGATGCATTCAATTTG...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTAAGTGGAAGAGTGCTTaGATCTCAGTTGCTAATGAT +
Preference number: 5 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIKWKSA*ISVAND
Trigger: ATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp CTAATCTTTAGAAGAACGGAGGCCTTGATTGGTGATTTCATGGGAACAAAACAGCGTAGAATGTTCGCATaGAGTTTAAAAGCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LIFRRTEALIGDFMGTKQRRMFA*SLKAFE
Trigger: TTCAAAGGCTTTTAAACTCAATGCGAACATTCTACG...CTGTTTTGTTCCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TGGGGAAGGAGTTGTGTCTTCTGTAAGTTAGTGTCTTCGGGTGATTTAATATCTTATATGATTGAAGTTTaGGTCCCCAGATTGTATGGA +
Preference number: 5 (lower is better)
Translates to: WGRSCVFCKLVSSGDLISYMIEV*VPRLYG
Trigger: TCCATACAATCTGGGGACCAAAACTTCAATCATATA...AGATATTAAATCACCCGAAGACACTAACTTACAGAAGACACAACTCCTTCCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGGAGAATTATATTGTCTaGCTACCAGAATCCATTCCT +
Preference number: 5 (lower is better)
Translates to: INNRMTVRCVSARPVSQKENYIV*LPESIP
Trigger: AGGAATGGATTCTGGTAGCAAGACAATATAATTCTC...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAGTTCGATTTGCTGCTTaGATTACTGTGTTAGCACTG +
Preference number: 5 (lower is better)
Translates to: KWKSALISVANDDGLIFRVRFAA*ITVLAL
Trigger: CAGTGCTAACACAGTAATCAAAGCAGCAAATCGAAC...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTGTCCTGGGACACAGTTaGGAAAACACTATTTATAAG +
Preference number: 5 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIVLGHS*ENTIYK
Trigger: CTTATAAATAGTGTTTTCCAAACTGTGTCCCAGGAC...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp ATAAACAATAGAATGACAGTGAGATGCGTTTCAGCAAGGCCAGTATCACAGAAGAGACCAGTAGGGCTTTaGTTTCAAAAGCTAACAATA +
Preference number: 5 (lower is better)
Translates to: INNRMTVRCVSARPVSQKRPVGL*FQKLTI
Trigger: TATTGTTAGCTTTTGAAACAAAAGCCCTACTGGTCT...CTTCTGTGATACTGGCCTTGCTGAAACGCATCTCACTGTCATTCTATTGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGAGTAGAGCAATATCCTTaGATTTTCCTGCTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: KWKSALISVANDDGLIFRVEQYP*IFLLVG
Trigger: ACCTACTAGCAGGAAAATCAAAGGATATTGCTCTAC...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341872.10
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGTAGAGCAATATCCTTaGATTTTCCTGCTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPVEQYP*IFLLVG
Trigger: ACCTACTAGCAGGAAAATCAAAGGATATTGCTCTAC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp AAGTGGAAGAGTGCTTTGATCTCAGTTGCTAATGATGATGGACTAATCTTTAGATTATCCTTTGTTCTTTaGGGAAACGGGAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: KWKSALISVANDDGLIFRLSFVL*GNGRDE
Trigger: TTCATCTCTCCCGTTTCCCAAAAGAACAAAGGATAA...TCTAAAGATTAGTCCATCATCATTAGCAACTGAGATCAAAGCACTCTTCCACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp TTAGTAGCAACCGATGTTCATTCACTACTCCATGTTAGGTGCTTTACTTGGATTTATATGATTGAAGTTTaGGTCCCCAGATTGTATGGA +
Preference number: 5 (lower is better)
Translates to: LVATDVHSLLHVRCFTWIYMIEV*VPRLYG
Trigger: TCCATACAATCTGGGGACCAAAACTTCAATCATATA...AATCCAAGTAAAGCACCTAACATGGAGTAGTGAATGAACATCGGTTGCTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGTCCTGGGACACAGTTaGGAAAACACTATTTATAAG +
Preference number: 5 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPVLGHS*ENTIYK
Trigger: CTTATAAATAGTGTTTTCCAAACTGTGTCCCAGGAC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS-3UTR CAA 90 bp GACACAGTTTGGAAAACACTATTTATAAGGTTGCACATATTACAAACAGCTCCCGTGACACACTTGAGTTaGCATGCGGCATTTTATTTT +
Preference number: 5 (lower is better)
Translates to: DTVWKTLFIRLHILQTAPVTHLS*HAAFYF
Trigger: AAAATAAAATGCCGCATGCAAACTCAAGTGTGTCAC...GGGAGCTGTTTGTAATATGTGCAACCTTATAAATAGTGTTTTCCAAACTGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS TCA 90 bp ATCATTCTTTTCCAGCTTCTTGTCGATTGGAGTCTCTTCTGTGTATaGCCTAAGATTTTAGGCAAGTTTCATTTAAAGGTTACCTGGATT +
Preference number: 5 (lower is better)
Translates to: IILFQLLVDWSLFCV*PKILGKFHLKVTWI
Trigger: AATCCAGGTAACCTTTAAATGAAACTTGCCTAAAATCTTAGGTCATACACAGAAGAGACTCCAATCGACAAGAAGCTGGAAAAGAATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000238181.11
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366583.6
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000430527.6
ENST00000434231.6
ENST00000442397.6
ENST00000450372.6
ENST00000454943.6
ENST00000475670.2
ENST00000481485.5
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528782.5
ENST00000529489.5
ENST00000532826.5
CDS GCA 90 bp CTCTTTAAATCTGTGTTTGTACTCCAGGCTGTGTACGCCATTTACTaGAACCTTGAATTCTCTAACATCACAATAAATTATCATCTCAAA +
Preference number: 5 (lower is better)
Translates to: LFKSVFVLQAVYAIY*NLEFSNITINYHLK
Trigger: TTTGAGATGATAATTTATTGTGATGTTAGAGAATTCAAGGTTGCAGTAAATGGCGTACACAGCCTGGAGTACAAACACAGATTTAAAGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000489586.6
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528259.5
CDS GCA 72 bp TTTCAGGACCAGGGTGGTCACCGCACAGGCCCCGCCTaGCTGGACCAAGCGCTGGCCTTCCCGGGGCGCCCA +
Preference number: 6 (lower is better)
Translates to: FQDQGGHRTGPA*LDQALAFPGRP
Trigger: TGGGCGCCCCGGGAAGGCCAGCGCTTGGTCCAGGCAGGCGGGGCCTGTGCGGTGACCACCCTGGTCCTGAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS CCA 72 bp GCTAAGTGCCGTCAGGGTTCCCGGCTCTGGCGTCCGTaGGCGGCTACGGGAAGCGACAGGAGTCAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: AKCRQGSRLWRP*AATGSDRSQSS
Trigger: CGAGGACTGACTCCTGTCGCTTCCCGTAGCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238181.11
CDS CCA 72 bp CAGGCCTCCAGGTCTAGGAGGGAGGGCGCTCGGGGCTaGGACTTTTCAGGACCAGGGTGGTCACCGCACAGG +
Preference number: 6 (lower is better)
Translates to: QASRSRREGARG*DFSGPGWSPHR
Trigger: CCTGTGCGGTGACCACCCTGGTCCTGAAAAGTCCCAGCCCCGAGCGCCCTCCCTCCTAGACCTGGAGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS GCA 72 bp GCGCTCCACGGAGCAGGTTGTTTGTCAGCAGCTAAGTaGCGTCAGGGTTCCCGGCTCTGGCGTCCGTGGGCG +
Preference number: 6 (lower is better)
Translates to: ALHGAGCLSAAK*RQGSRLWRPWA
Trigger: CGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTGGAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000238181.11
ENST00000341872.10
ENST00000406509.7
ENST00000416919.6
ENST00000450372.6
ENST00000454943.6
ENST00000475670.2
ENST00000481485.5
ENST00000526589.5
CDS CCA 72 bp TTGTCAGCAGCTAAGTGCCGTCAGGGTTCCCGGCTCTaGCGTCCGTGGGCGGCTGGCTGTTCCAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: LSAAKCRQGSRL*RPWAAGCSRPP
Trigger: TGGAGGCCTGGAACAGCCAGCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000526589.5
CDS CCA 72 bp TTGTCAGCAGCTAAGTGCCGTCAGGGTTCCCGGCTCTaGCGTCCGTGGGCGGCTACGGGAAGCGACAGGAGT +
Preference number: 6 (lower is better)
Translates to: LSAAKCRQGSRL*RPWAATGSDRS
Trigger: ACTCCTGTCGCTTCCCGTAGCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238181.11
CDS CAA 90 bp TGGCCCCAAAGACTGGTGTTTCAGGCGCTCCACGGAGCAGGTTGTTaGTCAGCAGCTAAGTGCCGTCAGGGTTCCCGGCTCTGGCGTCCG +
Preference number: 6 (lower is better)
Translates to: WPQRLVFQALHGAGC*SAAKCRQGSRLWRP
Trigger: CGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTGGAGCGCCTGAAACACCAGTCTTTGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000238181.11
ENST00000341872.10
ENST00000416919.6
ENST00000450372.6
ENST00000454943.6
ENST00000475670.2
ENST00000481485.5
ENST00000526589.5
CDS GCA 72 bp GACAGTTCGTCCAGGGCCCATGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTAAGCTGGGGCGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: DSSSRAHGGVQP*SEWQPKLGRAR
Trigger: TCTGGCACGCCCCAGCTTAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAACTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000238181.11
ENST00000323938.10
ENST00000341872.10
ENST00000366584.9
ENST00000526634.5
ENST00000528259.5
CDS CCA 72 bp TTGTCAGCAGCTAAGTGCCGTCAGGGTTCCCGGCTCTaGCGTCCGTGGGCGGCTCCGAAGTTCTACAGGATC +
Preference number: 6 (lower is better)
Translates to: LSAAKCRQGSRL*RPWAAPKFYRI
Trigger: GATCCTGTAGAACTTCGGAGCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481485.5
CDS CAA 90 bp TCCATCCAAAGACTGGTGTTTCAGGCGCTCCACGGAGCAGGTTGTTaGTCAGCAGCTAAGTGCCGTCAGGGTTCCCGGCTCTGGCGTCCG +
Preference number: 6 (lower is better)
Translates to: SIQRLVFQALHGAGC*SAAKCRQGSRLWRP
Trigger: CGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTGGAGCGCCTGAAACACCAGTCTTTGGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406509.7
CDS CAA 72 bp AGACTGGTGTTTCAGGCGCTCCACGGAGCAGGTTGTTaGTCAGCAGCTAAGTGCCGTCAGGGTTCCCGGCTC +
Preference number: 6 (lower is better)
Translates to: RLVFQALHGAGC*SAAKCRQGSRL
Trigger: GAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAAACAACCTGCTCCGTGGAGCGCCTGAAACACCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000238181.11
ENST00000341872.10
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000450372.6
ENST00000454943.6
ENST00000475670.2
ENST00000481485.5
ENST00000526589.5
ENST00000528782.5
ENST00000532826.5
CDS CAA 90 bp GAGGTGCTGAGGAAATACACAGGAATGGCTCAGAGGCAGGCCTGGTaGACTCTCGAATCCGTCCAGGGACGGCACACAAATGCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: EVLRKYTGMAQRQAW*TLESVQGRHTNAEG
Trigger: CCCCTCTGCATTTGTGTGCCGTCCCTGGACGGATTCGAGAGTCAACCAGGCCTGCCTCTGAGCCATTCCTGTGTATTTCCTCAGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366583.6
ENST00000489586.6
CDS GCA 72 bp CGGGGTCAACGCCAGGGTTTTCTCAGCTTCCTCGTCTaGCTCGGATCCAAGTCCAGACAGTGCCAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: RGQRQGFLSFLV*LGSKSRQCQKR
Trigger: TCTCTTCTGGCACTGTCTGGACTTGGATCCGAGGCAGACGAGGAAGCTGAGAAAACCCTGGCGTTGACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS CCA 72 bp TTGTCAGCAGCTAAGTGCCGTCAGGGTTCCCGGCTCTaGCGTCCGTGGGCGGATCCTTATACATACATCTGC +
Preference number: 6 (lower is better)
Translates to: LSAAKCRQGSRL*RPWADPYTYIC
Trigger: GCAGATGTATGTATAAGGATCCGCCCACGGACGCCAGAGCCGGGAACCCTGACGGCACTTAGCTGCTGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406509.7
ENST00000454943.6
CDS CAA 72 bp CGACAGTTCGTCCAGGGCCCATGGGGGTGTTCAACCTaGCAGCGAATGGCAGCCTCTGAAAAGAAGCCACAG +
Preference number: 6 (lower is better)
Translates to: RQFVQGPWGCST*QRMAASEKKPQ
Trigger: CTGTGGCTTCTTTTCAGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAACTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489586.6
ENST00000525789.1
CDS TCA 72 bp CCCCCGAAGTATCCCCAGGGACAGGTCCCGCCAGCATaGACACTTCGTATGCATCACAAGCAGCCATCACTT +
Preference number: 6 (lower is better)
Translates to: PPKYPQGQVPPA*TLRMHHKQPSL
Trigger: AAGTGATGGCTGCTTGTGATGCATACGAAGTGTTCATGCTGGCGGGACCTGTCCCTGGGGATACTTCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS GCA 72 bp GACAGTTCGTCCAGGGCCCATGGGGGTGTTCAACCTTaGAGCGAATGGCAGCCTCTGAAAAGAAGCCACAGT +
Preference number: 6 (lower is better)
Translates to: DSSSRAHGGVQP*SEWQPLKRSHS
Trigger: ACTGTGGCTTCTTTTCAGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAACTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489586.6
ENST00000525789.1
CDS CCA 72 bp CTGAGGAAATACACAGGAATGGCTCAGAGGCAGGCCTaGTTGACTCTCGAATCCGTCCAGGGACGGCACACA +
Preference number: 6 (lower is better)
Translates to: LRKYTGMAQRQA*LTLESVQGRHT
Trigger: TGTGTGCCGTCCCTGGACGGATTCGAGAGTCAACCAGGCCTGCCTCTGAGCCATTCCTGTGTATTTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366583.6
ENST00000489586.6
CDS GCA 72 bp GCCACATCGGCTCGAGGTTTCATGCTGCTGCCATTCTaGAGATCCACCTGGAATCTGTCTGCGTCACTAGGA +
Preference number: 6 (lower is better)
Translates to: ATSARGFMLLPF*RSTWNLSASLG
Trigger: TCCTAGTGACGCAGACAGATTCCAGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCGATGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000238181.11
ENST00000341872.10
ENST00000352231.6
ENST00000366583.6
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000430527.6
ENST00000450372.6
ENST00000454943.6
ENST00000481485.5
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528782.5
ENST00000532826.5
CDS GCA 72 bp ATCCGTCCAGGGACGGCACACAAATGCAGAGGGGGCTaGTTTGGGCCTCTATTGTGGATACAGGTTACTCGT +
Preference number: 6 (lower is better)
Translates to: IRPGTAHKCRGG*FGPLLWIQVTR
Trigger: ACGAGTAACCTGTATCCACAATAGAGGCCCAAAGCAGCCCCCTCTGCATTTGTGTGCCGTCCCTGGACGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366583.6
ENST00000489586.6
CDS CAA 72 bp CGACAGTTCGTCCAGGGCCCATGGGGGTGTTCAACCTaGCAGCGAATGGCAGCCTCTTTGACACATAGTTCA +
Preference number: 6 (lower is better)
Translates to: RQFVQGPWGCST*QRMAASLTHSS
Trigger: TGAACTATGTGTCAAAGAGGCTGCCATTCGCTGCAAGGTTGAACACCCCCATGGGCCCTGGACGAACTGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352231.6
ENST00000416919.6
ENST00000450372.6
ENST00000525042.1
ENST00000526589.5
ENST00000527974.5
ENST00000532640.1
CDS GCA 72 bp ACAATGCAGCCGGCCCTGTCTGCGTCACTAGGAACATaGCCACGTATCACAATCAAAGTTCCAGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: TMQPALSASLGT*PRITIKVPGSS
Trigger: GCTGGATCCTGGAACTTTGATTGTGATACGTGGGCATGTTCCTAGTGACGCAGACAGGGCCGGCTGCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323938.10
CDS GCA 72 bp CTCTGGCGTCCGTGGGCGGATCCTTATACATACATCTaGTTCCCCAGGAAGTGTCATGGACGGTGTCTTCTA +
Preference number: 6 (lower is better)
Translates to: LWRPWADPYTYI*FPRKCHGRCLL
Trigger: TAGAAGACACCGTCCATGACACTTCCTGGGGAAGCAGATGTATGTATAAGGATCCGCCCACGGACGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406509.7
ENST00000454943.6
CDS GCA 72 bp AATGAAAGGCCACATCGGCTCGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCTGTCTGCGTCACTAGG +
Preference number: 6 (lower is better)
Translates to: NERPHRLEVSCC*HSADPPVCVTR
Trigger: CCTAGTGACGCAGACAGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCGATGTGGCCTTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS CAA 72 bp GCCTCGGATCCAAGTCCAGACAGTGCCAGAAGAGACTaGGAGGCGCTGCTTTTTGACAGTACACACCTATCC +
Preference number: 6 (lower is better)
Translates to: ASDPSPDSARRD*EALLFDSTHLS
Trigger: GGATAGGTGTGTACTGTCAAAAAGCAGCGCCTCCAAGTCTCTTCTGGCACTGTCTGGACTTGGATCCGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS GCA 72 bp AATGAAAGGCCACATCGGCTCGAGGTTTCATGCTGCTaGCATTCTGCAGATCCACCTGGAATCTGTCTGCGT +
Preference number: 6 (lower is better)
Translates to: NERPHRLEVSCC*HSADPPGICLR
Trigger: ACGCAGACAGATTCCAGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCGATGTGGCCTTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000238181.11
ENST00000341872.10
ENST00000352231.6
ENST00000366583.6
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000430527.6
ENST00000450372.6
ENST00000454943.6
ENST00000481485.5
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528782.5
ENST00000532826.5
CDS GCA 72 bp CCCAGGGACAGGTCCCGCCAGCATGAACACTTCGTATaGATCACAAGCAGCCATCACTTAAGTTTCACGTAC +
Preference number: 6 (lower is better)
Translates to: PRDRSRQHEHFV*ITSSHHLSFTY
Trigger: GTACGTGAAACTTAAGTGATGGCTGCTTGTGATGCATACGAAGTGTTCATGCTGGCGGGACCTGTCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS GCA 72 bp GGGCTCACAAATGTGAAAAGCACCCCTGTGCACTCCTaGTCACTAATGAGGACTCAACCTGTCCCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: GLTNVKSTPVHS*SLMRTQPVPLQ
Trigger: TTGGAGAGGGACAGGTTGAGTCCTCATTAGTGAGCAGGAGTGCACAGGGGTGCTTTTCACATTTGTGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532826.5
CDS CCA 72 bp CCTCGGATCCAAGTCCAGACAGTGCCAGAAGAGACTTaGAGGCGCTGCTTTTTGACAGTACACACCTATCCT +
Preference number: 6 (lower is better)
Translates to: PRIQVQTVPEET*RRCFLTVHTYP
Trigger: AGGATAGGTGTGTACTGTCAAAAAGCAGCGCCTCCAAGTCTCTTCTGGCACTGTCTGGACTTGGATCCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS CCA 72 bp ACCTCCAGGCAGCTGGTGCTTTATGACGGAATGGTATaGTGTTGTGAAGGGCTACACGGGTTGAGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: TSRQLVLYDGMV*CCEGLHGLRRE
Trigger: CTCTCTTCTCAACCCGTGTAGCCCTTCACAACACCATACCATTCCGTCATAAAGCACCAGCTGCCTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529796.1
CDS TCA 72 bp TGCCCACGTATCACAATCAAAGTTCCAGGATCCAGCTaGTCAGGAATGGTGCCAACAAACGGGATTACCGGG +
Preference number: 6 (lower is better)
Translates to: CPRITIKVPGSS*SGMVPTNGITG
Trigger: CCCGGTAATCCCGTTTGTTGGCACCATTCCTGATCAGCTGGATCCTGGAACTTTGATTGTGATACGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000238181.11
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366583.6
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000430527.6
ENST00000442397.6
ENST00000450372.6
ENST00000454943.6
ENST00000481485.5
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528782.5
ENST00000529489.5
ENST00000532826.5
CDS TCA 72 bp ACAATGCAGCCGGCCCTTTTGAAACGAGGATTGAAATaGAAGGCCACATCGGCTCGAGGTTTCATGCTGCTG +
Preference number: 6 (lower is better)
Translates to: TMQPALLKRGLK*KATSARGFMLL
Trigger: CAGCAGCATGAAACCTCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTTCAAAAGGGCCGGCTGCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000238181.11
ENST00000341872.10
ENST00000352231.6
ENST00000366583.6
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000430527.6
ENST00000434231.6
ENST00000442397.6
ENST00000450372.6
ENST00000454943.6
ENST00000481485.5
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528782.5
ENST00000532826.5
CDS CAA 90 bp TCCTCGTCTGCCTCGGATCCAAGTCCAGACAGTGCCAGAAGAGACTaGGAGGCGCTGCTTTTTGACAGTACACACCTATCCTTATACATA +
Preference number: 6 (lower is better)
Translates to: SSSASDPSPDSARRD*EALLFDSTHLSLYI
Trigger: TATGTATAAGGATAGGTGTGTACTGTCAAAAAGCAGCGCCTCCAAGTCTCTTCTGGCACTGTCTGGACTTGGATCCGAGGCAGACGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS CAA 90 bp TCTCTCCCCAGACAAACAGGCAGTCATAAGTATATGTGCGTGTGCTaGTGTGCGCCTCTGCATACATGTGAGACATCTGGGTTCGAAGGT +
Preference number: 6 (lower is better)
Translates to: SLPRQTGSHKYMCVC*CAPLHTCETSGFEG
Trigger: ACCTTCGAACCCAGATGTCTCACATGTATGCAGAGGCGCACACAAGCACACGCACATATACTTATGACTGCCTGTTTGTCTGGGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528259.5
CDS GCA 72 bp AGATCCACCTGGAATCTGTCTGCGTCACTAGGAACATaGCCACGTATCACAATCAAAGTTCCAGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: RSTWNLSASLGT*PRITIKVPGSS
Trigger: GCTGGATCCTGGAACTTTGATTGTGATACGTGGGCATGTTCCTAGTGACGCAGACAGATTCCAGGTGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000238181.11
ENST00000341872.10
ENST00000352231.6
ENST00000366583.6
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000430527.6
ENST00000450372.6
ENST00000454943.6
ENST00000481485.5
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528782.5
ENST00000532826.5
CDS GCA 72 bp GCCACATCGGCTCGAGGTTTCATGCTGCTGCCATTCTaGAGATCCACCTGGAATCGGGTTATAGATGATATT +
Preference number: 6 (lower is better)
Translates to: ATSARGFMLLPF*RSTWNRVIDDI
Trigger: AATATCATCTATAACCCGATTCCAGGTGGATCTGCAGAATGGCAGCAGCATGAAACCTCGAGCCGATGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434231.6
CDS GCA 72 bp ATTCTGCAGATCCACCTGTCTGCGTCACTAGGAACATaGCCACGTATCACAATCAAAGTTCCAGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: ILQIHLSASLGT*PRITIKVPGSS
Trigger: GCTGGATCCTGGAACTTTGATTGTGATACGTGGGCATGTTCCTAGTGACGCAGACAGGTGGATCTGCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442397.6
CDS CAA 72 bp GCACACAAATGCAGAGGGGGCTGCTTTGGGCCTCTATaGTGGATACAGGTTACTCGTAACAGCTCATTACAA +
Preference number: 6 (lower is better)
Translates to: AHKCRGGCFGPL*WIQVTRNSSLQ
Trigger: TTGTAATGAGCTGTTACGAGTAACCTGTATCCACAATAGAGGCCCAAAGCAGCCCCCTCTGCATTTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366583.6
ENST00000489586.6
CDS CAA 72 bp GACGGAATGGTATGGTGTTGTGAAGGGCTACACGGGTaGAGAAGAGAGTCTGATATCCCTGTTCATCTGAGT +
Preference number: 6 (lower is better)
Translates to: DGMVWCCEGLHG*RRESDIPVHLS
Trigger: ACTCAGATGAACAGGGATATCAGACTCTCTTCTCAACCCGTGTAGCCCTTCACAACACCATACCATTCCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529796.1
CDS CAA 72 bp AGACAAACAGGCAGTCATAAGTATATGTGCGTGTGCTaGTGTGCGCCTCTGCATACATGTGAGACATCTGGG +
Preference number: 6 (lower is better)
Translates to: RQTGSHKYMCVC*CAPLHTCETSG
Trigger: CCCAGATGTCTCACATGTATGCAGAGGCGCACACAAGCACACGCACATATACTTATGACTGCCTGTTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528259.5
CDS CAA 90 bp GTGCTTTATGACGGAATGGTATGGTGTTGTGAAGGGCTACACGGGTaGAGAAGAGAGTCTGATATCCCTGTTCATCTGAGTCCTTTATCC +
Preference number: 6 (lower is better)
Translates to: VLYDGMVWCCEGLHG*RRESDIPVHLSPLS
Trigger: GGATAAAGGACTCAGATGAACAGGGATATCAGACTCTCTTCTCAACCCGTGTAGCCCTTCACAACACCATACCATTCCGTCATAAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529796.1
CDS GCA 72 bp AATAACAAGCCAGTGACCCAATTTAAGCCATCTGCTTaGATTAAATCACGCAACCCCCGAAGTATCCCCAGG +
Preference number: 6 (lower is better)
Translates to: NNKPVTQFKPSA*IKSRNPRSIPR
Trigger: CCTGGGGATACTTCGGGGGTTGCGTGATTTAATGCAAGCAGATGGCTTAAATTGGGTCACTGGCTTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS GCA 72 bp CAAGTCCAGACAGTGCCAGAAGAGACTTGGAGGCGCTaGTTTTTGACAGTACACACCTATCCTTATACATAC +
Preference number: 6 (lower is better)
Translates to: QVQTVPEETWRR*FLTVHTYPYTY
Trigger: GTATGTATAAGGATAGGTGTGTACTGTCAAAAAGCAGCGCCTCCAAGTCTCTTCTGGCACTGTCTGGACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS CCA 72 bp CACAAATGCAGAGGGGGCTGCTTTGGGCCTCTATTGTaGATACAGGTTACTCGTAACAGCTCATTACAACTT +
Preference number: 6 (lower is better)
Translates to: HKCRGGCFGPLL*IQVTRNSSLQL
Trigger: AAGTTGTAATGAGCTGTTACGAGTAACCTGTATCCACAATAGAGGCCCAAAGCAGCCCCCTCTGCATTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366583.6
ENST00000489586.6
CDS CAA 72 bp AGATGTAATGTCAGCAAGAAGGTGGGAGCATGGCTGTaGAGAGTGCAAACTGTTTTTACCCTTGTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RCNVSKKVGAWL*RVQTVFTLVKG
Trigger: GCCCTTCACAAGGGTAAAAACAGTTTGCACTCTCAACAGCCATGCTCCCACCTTCTTGCTGACATTACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526652.1
CDS GCA 72 bp CAACAGAACGAGACTCCATATCCTTATACATACATCTaGTTCCCCAGGAAGTGTCATGGACGGTGTCTTCTA +
Preference number: 6 (lower is better)
Translates to: QQNETPYPYTYI*FPRKCHGRCLL
Trigger: TAGAAGACACCGTCCATGACACTTCCTGGGGAAGCAGATGTATGTATAAGGATATGGAGTCTCGTTCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529489.5
CDS CCA 72 bp AATGAGGACTCAACCTGTCCCTCTCCAAAACCTACCTaGAATTTGTCCTTCAGCACCATAATCACGATCTCA +
Preference number: 6 (lower is better)
Translates to: NEDSTCPSPKPT*NLSFSTIITIS
Trigger: TGAGATCGTGATTATGGTGCTGAAGGACAAATTCCAGGTAGGTTTTGGAGAGGGACAGGTTGAGTCCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532826.5
CDS CAA 72 bp AGCGTGTCAATACTGCTGAGCTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACGCCATTTACTGCAACC +
Preference number: 6 (lower is better)
Translates to: SVSILLSSLNLC*YSRLCTPFTAT
Trigger: GGTTGCAGTAAATGGCGTACACAGCCTGGAGTACAAACACAGATTTAAAGAGCTCAGCAGTATTGACACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000489586.6
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528259.5
CDS CAA 90 bp CAGAGAATAAGATGTAATGTCAGCAAGAAGGTGGGAGCATGGCTGTaGAGAGTGCAAACTGTTTTTACCCTTGTGAAGGGCGAGTTAGTA +
Preference number: 6 (lower is better)
Translates to: QRIRCNVSKKVGAWL*RVQTVFTLVKGELV
Trigger: TACTAACTCGCCCTTCACAAGGGTAAAAACAGTTTGCACTCTCAACAGCCATGCTCCCACCTTCTTGCTGACATTACATCTTATTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526652.1
CDS CCA 72 bp CCACATGAAATAACCCAGGCAAAAATACTCACAAGCTaGGGCGTGCCAGACTTTGGAACATTTTCTCTACTT +
Preference number: 6 (lower is better)
Translates to: PHEITQAKILTS*GVPDFGTFSLL
Trigger: AAGTAGAGAAAATGTTCCAAAGTCTGGCACGCCCCAGCTTGTGAGTATTTTTGCCTGGGTTATTTCATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366583.6
ENST00000526652.1
CDS TCA 72 bp ACTGAGGCACTGGCCACATGTATAATAACAAGCCAGTaGCCCAATTTAAGCCATCTGCTTGCATTAAATCAC +
Preference number: 6 (lower is better)
Translates to: TEALATCIITSQ*PNLSHLLALNH
Trigger: GTGATTTAATGCAAGCAGATGGCTTAAATTGGGTCACTGGCTTGTTATTATACATGTGGCCAGTGCCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526634.5
CDS GCA 72 bp TTTTTGACAGTACACACCTATCCTTATACATACATCTaGTTCCCCAGGAAGTGTCATGGACGGTGTCTTCTA +
Preference number: 6 (lower is better)
Translates to: FLTVHTYPYTYI*FPRKCHGRCLL
Trigger: TAGAAGACACCGTCCATGACACTTCCTGGGGAAGCAGATGTATGTATAAGGATAGGTGTGTACTGTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526589.5
CDS CCA 72 bp AGAATAAGATGTAATGTCAGCAAGAAGGTGGGAGCATaGCTGTTGAGAGTGCAAACTGTTTTTACCCTTGTG +
Preference number: 6 (lower is better)
Translates to: RIRCNVSKKVGA*LLRVQTVFTLV
Trigger: CACAAGGGTAAAAACAGTTTGCACTCTCAACAGCCATGCTCCCACCTTCTTGCTGACATTACATCTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526652.1
CDS TCA 72 bp GTAGGGAAACAGTTCTACAGTAAGGAATGGAATGAATaGAGCTGCCCTCCACGGTTTAAACTGTTCATTTTC +
Preference number: 6 (lower is better)
Translates to: VGKQFYSKEWNE*SCPPRFKLFIF
Trigger: GAAAATGAACAGTTTAAACCGTGGAGGGCAGCTTCATTCATTCCATTCCTTACTGTAGAACTGTTTCCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366583.6
ENST00000532640.1
CDS CCA 72 bp ATCAATATGGGGCTCAAAGTACATCCCAGGACTAAATaGGAAAGAGGTAATATTTCTCTCTTCTTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: INMGLKVHPRTK*ERGNISLFFSP
Trigger: TGGGGAGAAGAAGAGAGAAATATTACCTCTTTCCCATTTAGTCCTGGGATGTACTTTGAGCCCCATATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525789.1
CDS CAA 90 bp TTAATTTCCAGCGTGTCAATACTGCTGAGCTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGTACGCCATTTACTGCAACCTTGAATTCT +
Preference number: 6 (lower is better)
Translates to: LISSVSILLSSLNLC*YSRLCTPFTATLNS
Trigger: AGAATTCAAGGTTGCAGTAAATGGCGTACACAGCCTGGAGTACAAACACAGATTTAAAGAGCTCAGCAGTATTGACACGCTGGAAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000489586.6
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528259.5
CDS CAA 72 bp GGTTGTTTAAGGACAACATCATTCTTTTCCAGCTTCTaGTCGATTGGAGTCTCTTCTGTGTATGACCTAAGA +
Preference number: 6 (lower is better)
Translates to: GCLRTTSFFSSF*SIGVSSVYDLR
Trigger: TCTTAGGTCATACACAGAAGAGACTCCAATCGACAAGAAGCTGGAAAAGAATGATGTTGTCCTTAAACAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000238181.11
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366583.6
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000430527.6
ENST00000434231.6
ENST00000442397.6
ENST00000450372.6
ENST00000454943.6
ENST00000475670.2
ENST00000481485.5
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528782.5
ENST00000529489.5
ENST00000532826.5
CDS TCA 72 bp TTCCAGCTTCTTGTCGATTGGAGTCTCTTCTGTGTATaGCCTAAGATTTTAGGCAAGTTTCATTTAAAGGTT +
Preference number: 6 (lower is better)
Translates to: FQLLVDWSLFCV*PKILGKFHLKV
Trigger: AACCTTTAAATGAAACTTGCCTAAAATCTTAGGTCATACACAGAAGAGACTCCAATCGACAAGAAGCTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000238181.11
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366583.6
ENST00000366584.9
ENST00000406509.7
ENST00000416919.6
ENST00000430527.6
ENST00000434231.6
ENST00000442397.6
ENST00000450372.6
ENST00000454943.6
ENST00000475670.2
ENST00000481485.5
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528782.5
ENST00000529489.5
ENST00000532826.5
CDS CCA 72 bp ATAAATTATCATCTCAAAGTACATCCCAGGACTAAATaGGAAAGAGGTAATATTTCTCTCTTCTTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: INYHLKVHPRTK*ERGNISLFFSP
Trigger: TGGGGAGAAGAAGAGAGAAATATTACCTCTTTCCCATTTAGTCCTGGGATGTACTTTGAGATGATAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000323938.10
ENST00000341872.10
ENST00000352231.6
ENST00000366584.9
ENST00000416919.6
ENST00000450372.6
ENST00000489586.6
ENST00000525042.1
ENST00000526589.5
ENST00000526634.5
ENST00000527974.5
ENST00000528259.5