RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LGALS3BP (Homo sapiens)

Ensembl gene IDs: ENSG00000108679

Ensembl transcript IDs: ENST00000262776.8, ENST00000585407.5, ENST00000586300.1, ENST00000586720.5, ENST00000587251.5, ENST00000587310.5, ENST00000587311.5, ENST00000588198.5, ENST00000588205.5, ENST00000588508.1, ENST00000588587.5, ENST00000588899.1, ENST00000588990.5, ENST00000589527.5, ENST00000589775.6, ENST00000589906.5, ENST00000591274.1, ENST00000591778.5, ENST00000592255.1

Found 927 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCACACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTaGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCT +
Preference number: 1 (lower is better)
Translates to: GHTGASAGRCAPAHH*CRPHQRLSRACSCS
Trigger: AGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR GCA 90 bp GTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGCCCTaGACATTCACGCTGATGGACAGGTCGCAGCCCCGCTGGCTGTCA +
Preference number: 1 (lower is better)
Translates to: VRMTVWPQKPRASSP*TFTLMDRSQPRWLS
Trigger: TGACAGCCAGCGGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
3UTR GCA 90 bp CGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCC +
Preference number: 1 (lower is better)
Translates to: RPRSPLVQTTPASLS*LQLLFSQPRDLQSA
Trigger: GGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR GCA 90 bp CACACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTaGAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCA +
Preference number: 1 (lower is better)
Translates to: HTGASAGRCAPAHHW*RPHQRLSRACSCSS
Trigger: TGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR GCA 90 bp GGCCAAGGGCCTCCGAGAGCTCCCTGGAGAGGTCCAGGGTGTGGGTaGTCCTGGTTTCTAAGAAGGGGCGGGAGGGAAGTGGGCTGCGTT +
Preference number: 1 (lower is better)
Translates to: GQGPPRAPWRGPGCG*SWFLRRGGREVGCV
Trigger: AACGCAGCCCACTTCCCTCCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGGGAGCTCTCGGAGGCCCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
3UTR CCA 90 bp AGAGAGGAAGGAAGCCGAGGAGGGGAGCCTGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTC +
Preference number: 1 (lower is better)
Translates to: REEGSRGGEPAVRAS*GSPVLTTLGPRRLV
Trigger: GACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCCTCCTCGGCTTCCTTCCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 90 bp GGGCCTCCGAGAGCTCCCTGGAGAGGTCCAGGGTGTGGGTGCTCCTaGTTTCTAAGAAGGGGCGGGAGGGAAGTGGGCTGCGTTAGGAGC +
Preference number: 1 (lower is better)
Translates to: GPPRAPWRGPGCGCS*FLRRGGREVGCVRS
Trigger: GCTCCTAACGCAGCCCACTTCCCTCCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGGGAGCTCTCGGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
3UTR GCA 90 bp CAGGTAGAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTaGCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTC +
Preference number: 1 (lower is better)
Translates to: QVEGADDRAEAVEVP*RAGEGGGALRAVGV
Trigger: GACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTCTACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 90 bp TTCACGCTGATGGACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTaGCCAAGGGCCTCCGAGAGCTCCCTGGAGAGGTCCAGGGTGTGG +
Preference number: 1 (lower is better)
Translates to: FTLMDRSQPRWLSKI*PRASESSLERSRVW
Trigger: CCACACCCTGGACCTCTCCAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTCCATCAGCGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
3UTR CCA 90 bp TCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCTGGAG +
Preference number: 1 (lower is better)
Translates to: SSPCTFTLMDRSQPR*LSKIWPRASESSLE
Trigger: CTCCAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
3UTR CCA 90 bp ATCTGGCCAAGGGCCTCCGAGAGCTCCCTGGAGAGGTCCAGGGTGTaGGTGCTCCTGGTTTCTAAGAAGGGGCGGGAGGGAAGTGGGCTG +
Preference number: 1 (lower is better)
Translates to: IWPRASESSLERSRV*VLLVSKKGREGSGL
Trigger: CAGCCCACTTCCCTCCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGGGAGCTCTCGGAGGCCCTTGGCCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
3UTR TCA 90 bp TCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACACCTaGGGAGTTGGTCAGGTAGAAGGGGCGGATGACCGTGCGGAAGCC +
Preference number: 1 (lower is better)
Translates to: SPVLTTLGPRRLVHT*GVGQVEGADDRAEA
Trigger: GGCTTCCGCACGGTCATCCGCCCCTTCTACCTGACCAACTCCTCAGGTGTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 90 bp CCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCACTGGACCTCATCCAGCATGATGGG +
Preference number: 1 (lower is better)
Translates to: PAVALQPAQGLAVGQ*GLGSRALDLIQHDG
Trigger: CCCATCATGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR GCA 90 bp CCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTG +
Preference number: 1 (lower is better)
Translates to: PAHHWCRPHQRLSRA*SCSSASPGTCSRPV
Trigger: CACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR CCA 90 bp AGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTaGTGTCCAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAAT +
Preference number: 1 (lower is better)
Translates to: SALPGRGRRRCSSSC*CPGHWESQPSSPRN
Trigger: ATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 90 bp CCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCTaGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCTAAGAAGGGGC +
Preference number: 1 (lower is better)
Translates to: PAGCQRSGQGPPRAP*RGPGCGCSWFLRRG
Trigger: GCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
3UTR GCA 90 bp CACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCT +
Preference number: 1 (lower is better)
Translates to: HHWCRPHQRLSRACS*SSASPGTCSRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR CCA 90 bp GCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTGGATaGTGGGGAGGTAGACCAGGGACCAGGACACCCTCTTGTCCTGGA +
Preference number: 1 (lower is better)
Translates to: ARPRSRRSRSSSSSG*WGGRPGTRTPSCPG
Trigger: TCCAGGACAAGAGGGTGTCCTGGTCCCTGGTCTACCTCCCCACCATCCAGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 90 bp CCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCTaGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGA +
Preference number: 1 (lower is better)
Translates to: PAGCQRSGQGPPRAP*RGPGCGCSWFHWCR
Trigger: TCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
3UTR GCA 90 bp GTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCC +
Preference number: 1 (lower is better)
Translates to: VLLVSLVQTTPASLS*LQLLFSQPRDLQSA
Trigger: GGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR TCA 90 bp TCCAGGTGGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACCGGGCCAGCAACTGGAAGGGCACAG +
Preference number: 1 (lower is better)
Translates to: SRWARCKSGACRYPR*GSGLCTGPATGRAQ
Trigger: CTGTGCCCTTCCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCACCGAGGATACCTACAAGCCCCGGATTTACACCTCGCCCACCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 90 bp CTTTGTTTTCGTAGGCAATGGTGCGATCTGAGCCGCCAGACTTGGTaGGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGT +
Preference number: 1 (lower is better)
Translates to: LCFRRQWCDLSRQTW*GPGQGARPRSRRSR
Trigger: ACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAAACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 90 bp TGTCCAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTaGCGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGT +
Preference number: 1 (lower is better)
Translates to: CPGHWESQPSSPRNR*RLPRRALRRASGLC
Trigger: ACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR GCA 90 bp TTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCT +
Preference number: 1 (lower is better)
Translates to: FHWCRPHQRLSRACS*SSASPGTCSRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR GCA 90 bp TCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTG +
Preference number: 1 (lower is better)
Translates to: SWFHWCRPHQRLSRA*SCSSASPGTCSRPV
Trigger: CACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR TCA 90 bp TTCGCAGAGCATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTaGGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGA +
Preference number: 1 (lower is better)
Translates to: FAEHQGFVFVGNGAI*AARLGEAQDRELVR
Trigger: TCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATGCTCTGCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR GCA 90 bp TTCTGGAACAGGGCCTCGTGGCTCCAGTACAGGGACAGGTTGAACTaGAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGATC +
Preference number: 1 (lower is better)
Translates to: FWNRASWLQYRDRLN*SSKSSSGSIMGKRI
Trigger: GATCCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR GCA 90 bp GGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTGACGTCTaGCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTTTCGTA +
Preference number: 1 (lower is better)
Translates to: GTGNRSLPALEIGDV*HEEPFAEHQGFVFV
Trigger: TACGAAAACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 90 bp TGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTTCTaGAACAGGGCCTCGTGGCTCCAGTACAGGGACAGGTTGAACTGC +
Preference number: 1 (lower is better)
Translates to: WKGTVWNSRACRVFF*NRASWLQYRDRLNC
Trigger: GCAGTTCAACCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCAGAAGAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 90 bp CTGCCTGGCCCCATAGGCAGAGGCCAGCTTGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAG +
Preference number: 1 (lower is better)
Translates to: LPGPIGRGQLVEALD*RQGDVNPSGVEVPE
Trigger: CTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGCCTATGGGGCCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR TCA 90 bp TCTTCTTCTGGAACAGGGCCTCGTGGCTCCAGTACAGGGACAGGTTaGACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGC +
Preference number: 1 (lower is better)
Translates to: SSSGTGPRGSSTGTG*TAAQRAPQGASWGS
Trigger: GCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCAGAAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 90 bp GGTAGACCAGGGACCAGGACACCCTCTTGTCCTGGAAGAGGAAGCTaGGGTGTTGTGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGT +
Preference number: 1 (lower is better)
Translates to: GRPGTRTPSCPGRGS*GVVESGRTGRGSIC
Trigger: ACAGATACTACCCCTACCAGTCCTTCCAGACTCCACAACACCCCAGCTTCCTCTTCCAGGACAAGAGGGTGTCCTGGTCCCTGGTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 90 bp AGAATATTTGACCAAAGGCCCCCGTCTGGACTGATAGACCAGTTGTaGCTTCCGTGCACTCCAGGAACTGTCTGTCACAAAGGCACTCCA +
Preference number: 1 (lower is better)
Translates to: RIFDQRPPSGLIDQL*LPCTPGTVCHKGTP
Trigger: TGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTGCACGGAAGTCACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGGTCAAATATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 90 bp AGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGAAGAATATTTaGCCAAAGGCCCCCGTCTGGACTGATAGACCAGTTGTGACTTCC +
Preference number: 1 (lower is better)
Translates to: SICSQRGLGSNQKNI*PKAPVWTDRPVVTS
Trigger: GGAAGTCACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCCCCCTCTGACTACAGATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 2 (lower is better)
Translates to: GAPPLTIGADHTSVSLVPPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...AGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR GCA 90 bp CACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACAGCCAGCCCAGGGACTTaGAGTCGGCCAGTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: HWGLRREVRPRSPLVQTTASPGT*SRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGC...TGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR CAA 90 bp AGGGCACACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATaGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: RAHWGLRREVRPRSP*VQTTPASLSCLQLL
Trigger: GAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTGTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp GTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 2 (lower is better)
Translates to: VQTTPASLSCLQLLFSQPPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...GGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp CAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGCCATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 2 (lower is better)
Translates to: QVGSQDDRVATEAQGVLAISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...GGCGAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587310.5
3UTR-3UTR TCA 90 bp TGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCCTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCA +
Preference number: 2 (lower is better)
Translates to: CAPAHHWCRPHQRLSRACLAVGQ*GLGSRA
Trigger: TGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAG...GCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR GCA 90 bp GGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCCAGCCCAGGGACTTaGAGTCGGCCAGTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GAPPLTIGADHTSVSLVPASPGT*SRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGC...AGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp CGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: RAGEGGGALRAVGVQGTGSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...CCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp GAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: EVRPRSPLVQTTPASLSCCPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp TGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCC +
Preference number: 2 (lower is better)
Translates to: CAPAHHWCRPHQRLSRACALPRA*VAFSKP
Trigger: GGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGC...GCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR TCA 90 bp GTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: VRPRSPLVQTTPASLSCLQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...CAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR GCA 90 bp GACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTAGGGCGTCCTCGCCCTaGACATTCACGCTGATGGAC +
Preference number: 2 (lower is better)
Translates to: DRAEAVEVPCRAGEGGGARASSP*TFTLMD
Trigger: GTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCT...AGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR GCA 90 bp GAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: EVRPRSPLVQTTPASLSCMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp GGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 2 (lower is better)
Translates to: GADDRAEAVEVPCRAGEGTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...TCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: ASRLAVRMTVWPQKPRASSFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...GGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CCA 90 bp CAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: QRGLRSSPAAAWPHRQRPSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CCA 90 bp CAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGCCCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 2 (lower is better)
Translates to: QVGSQDDRVATEAQGVLAPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...GGCGAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587310.5
3UTR-3UTR CCA 90 bp GGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 2 (lower is better)
Translates to: GAPPLTIGADHTSVSLVPPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...AGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp GCCCGGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGGGTGTGGGTGCTCCTaGTTTCTAAGAAGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: ARLLPQGLGLQVGSQDDRGCGCS*FLRRGG
Trigger: CCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCC...ACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
3UTR-3UTR TCA 90 bp CAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCACCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: QRGLRSSPAAAWPHRQRPPAHSR*WTGRSP
Trigger: GGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGG...TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR TCA 90 bp CTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGCAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: LQLLFSQPRDLQSASEASQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...CGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR GCA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGTCGAGGGCGTCCTGGTaGTTACCACCTGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGSRASW*LPPGNW
Trigger: CCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGA...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR GCA 90 bp GGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCGTCCCCTGTGGCCACTaGATAGGCATACAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: GEEDGKEACAVALQLPGPVPCGH*IGIQVQ
Trigger: CTGGACCTGTATGCCTATGCAGTGGCCACAGGGGAC...GGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CCA 90 bp GGACACTGGGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGATGGTGGGAGAACTCCTaGTGGACCCTAGTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: GHWARPRPASRPRSSRPGWWENS*WTLVEA
Trigger: GGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCA...TCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 2 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCACAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: QGTGNRSLPALEIGDVCHSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...GTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp GATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: DGKEACAVALQLPGPIGRSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...TCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CCA 90 bp GAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGTTGGAGCAGGTCTGTaGGGACACTGGGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: EAQDRELVRGAGEAVVPAVGAGL*GHWARP
Trigger: AGGCCTGGCCCAGTGTCCCCACAGACCTGCTCCAAC...TGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAACAAAGGCACTCCAGGTaGGCGAGGTGTAAATCCGGG +
Preference number: 2 (lower is better)
Translates to: EGADDRAEAVEVPCRAGEQRHSR*ARCKSG
Trigger: CCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTG...TTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGACCAAAGGCCCCCGTCTaGACTGATAGACCAGTTGTG +
Preference number: 2 (lower is better)
Translates to: GADDRAEAVEVPCRAGEGPKAPV*TDRPVV
Trigger: CACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGG...TCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTTGGTGTCCAGGGCACTaGGAATCGCAGCCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: EGVLGFSGSHHPWATPSSWCPGH*ESQPSS
Trigger: GCTGGAAGGCTGCGATTCCCAGTGCCCTGGACACCA...ACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCA +
Preference number: 2 (lower is better)
Translates to: DRSQPRWLSKIWPRASESRSQPR*LSKIWP
Trigger: TGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCT...GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
3UTR-3UTR CCA 90 bp CTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 2 (lower is better)
Translates to: LQLLFSQPRDLQSASEASPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...CGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp CAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: QTTPASLSCLQLLFSQPRCPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp CAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCC +
Preference number: 2 (lower is better)
Translates to: QTTPASLSCLQLLFSQPRALPRA*VAFSKP
Trigger: GGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGC...CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR CAA 90 bp AAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTaGGTGTCCAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAA +
Preference number: 2 (lower is better)
Translates to: KCPAGQGKEEVLFEL*VSRALGIAAFQPSK
Trigger: TTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp CCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTCCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: PGQGARPRSRRSRSSSSSPAHSR*WTGRSP
Trigger: GGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGG...AGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR TCA 90 bp GAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAGCTTCATCCACACTCATGGTaGCATTGCTGCCCGGCTCCT +
Preference number: 2 (lower is better)
Translates to: EACAVALQLPGPIGRGQLHPHSW*HCCPAP
Trigger: AGGAGCCGGGCAGCAATGTCACCATGAGTGTGGATG...AAGCTGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR TCA 90 bp CAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGCAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: QTTPASLSCLQLLFSQPRQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR GCA 90 bp CAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGCCGTCCCCTGTGGCCACTaGATAGGCATACAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: QVGSQDDRVATEAQGVLAVPCGH*IGIQVQ
Trigger: CTGGACCTGTATGCCTATGCAGTGGCCACAGGGGAC...GGCGAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR GCA 90 bp CTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCCCTGTGGCCACTaGATAGGCATACAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: LGLQVGSQDDRVATEAQGVPCGH*IGIQVQ
Trigger: CTGGACCTGTATGCCTATGCAGTGGCCACAGGGGAC...GCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR GCA 90 bp CAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGGTTATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: QLLFSQPRDLQSASEASVMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...AACCGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp GCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 2 (lower is better)
Translates to: AGQGKEEVLFELLVSRALTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...CAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: QTTPASLSCLQLLFSQPRSFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
3UTR-3UTR CCA 90 bp GAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCACTGGGCAGCAGCAGTTaGAGCAGGTCTGTGGGGACA +
Preference number: 2 (lower is better)
Translates to: EAQDRELVRGAGEAVVPALGSSS*SRSVGT
Trigger: TGTCCCCACAGACCTGCTCCAACTGCTGCTGCCCAG...TGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp TCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACACCTGGAACAGGGCCTCGTaGCTCCAGTACAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: SWGSPVLTTLGPRRLVHTWNRAS*LQYRDR
Trigger: CCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCA...GGTGTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCCAAAGGCACTCCAGGTaGGCGAGGTGTAAATCCGGG +
Preference number: 2 (lower is better)
Translates to: VRKPLKCPAGQGKEEVLFQRHSR*ARCKSG
Trigger: CCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTG...GAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CAGAAGCCCAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCAGAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCA +
Preference number: 2 (lower is better)
Translates to: QKPRASSPCTFTLMDRSQRSQPR*LSKIWP
Trigger: TGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCT...CTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
3UTR-3UTR CCA 90 bp AGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 2 (lower is better)
Translates to: RGPGCGCSWFHWCRPHQRISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR-3UTR CCA 90 bp CCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 2 (lower is better)
Translates to: PLVQTTPASLSCLQLLFSISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR CAA 90 bp TCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: SPLVQTTPASLSCLQ*LFSQPRDLQSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR TCA 90 bp CGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGCTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: RAGEGGGALRAVGVQGTGLVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...CCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp GGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGCTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: GLGLQVGSQDDRVATEAQLVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...CTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR TCA 90 bp TCCAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCAGCCCTCGAAATCGGTaGCGTCTGCCACGAAGAGCC +
Preference number: 2 (lower is better)
Translates to: SRALGIAAFQPSKSVTSASPRNR*RLPRRA
Trigger: GGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCT...GGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp CACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGCC +
Preference number: 2 (lower is better)
Translates to: HQRLSRACSCSSASPGTCGPHPA*WGLILA
Trigger: GGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCC...GCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR GCA 90 bp GGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: GCSWFHWCRPHQRLSRACMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...GCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR-3UTR CCA 90 bp GGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 2 (lower is better)
Translates to: GVLVLTTWKLVRWWENSWAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...CCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp AGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 2 (lower is better)
Translates to: SNLEGVLVLTTWKLVRWWAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...CCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTTGGGAGAACTCCTGGTaGACCCTAGTGGAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: EGVLGFSGSHHPWATPSSWENSW*TLVEAF
Trigger: GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCA...ACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 2 (lower is better)
Translates to: EVPCRAGEGGGALRAVGVTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...GACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp TGTACCGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGGTCAGGATGACCGTGTaGCCACAGAAGCCCAGGGCG +
Preference number: 2 (lower is better)
Translates to: CTGPATGRAQCGIPGPAEVRMTV*PQKPRA
Trigger: CGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC...CTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp AGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: SLPALEIGDVCHEEPFAESFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...CTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp CAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTGGATGGCCTGGGGGAGGAGGATaGCAAAGAGGCTTGCGCAGT +
Preference number: 2 (lower is better)
Translates to: QGARPRSRRSRSSSSSGWPGGGG*QRGLRS
Trigger: ACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGG...CCATCCAGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp AGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTACTGGGCAGCAGCAGTTaGAGCAGGTCTGTGGGGACA +
Preference number: 2 (lower is better)
Translates to: RLGEAQDRELVRGAGEAVLGSSS*SRSVGT
Trigger: TGTCCCCACAGACCTGCTCCAACTGCTGCTGCCCAG...TACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCACTGGAACAGGGCCTCGTaGCTCCAGTACAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: QGTGNRSLPALEIGDVCHWNRAS*LQYRDR
Trigger: CCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCA...GTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTTGGAAGGGCACAGTGTaGAATTCCAGGGCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: EGVLGFSGSHHPWATPSSWKGTV*NSRACR
Trigger: TCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA...ACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCTACCGGGCCAGCAACTaGAAGGGCACAGTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: VRKPLKCPAGQGKEEVLFYRASN*KGTVWN
Trigger: ATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTA...GAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTCGGGGGGCGGGAGGGAAGTaGGCTGCGTTAGGAGCCGGG +
Preference number: 2 (lower is better)
Translates to: EASLWKHLTDDRVMSILRGAGGK*AALGAG
Trigger: CCCGGCTCCTAACGCAGCCCACTTCCCTCCCGCCCC...CCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000588198.5
3UTR CAA 90 bp GTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: VSLVQTTPASLSCLQ*LFSQPRDLQSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR-3UTR TCA 90 bp AGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGCCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: RVWVLLVSLVQTTPASLSPAHSR*WTGRSP
Trigger: GGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGG...CGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
3UTR-3UTR TCA 90 bp AGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGGGTTGGCAGTCAGGATaGCCGTGTGGCCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: SLPALEIGDVCHEEPFAEGWQSG*PCGHRS
Trigger: GCTTCTGTGGCCACACGGTCATCCTGACTGCCAACC...CTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR TCA 90 bp AGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTACATCCACACTCATGGTaGCATTGCTGCCCGGCTCCT +
Preference number: 2 (lower is better)
Translates to: RLGEAQDRELVRGAGEAVHPHSW*HCCPAP
Trigger: AGGAGCCGGGCAGCAATGTCACCATGAGTGTGGATG...TACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR TCA 90 bp GATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGACATCCACACTCATGGTaGCATTGCTGCCCGGCTCCT +
Preference number: 2 (lower is better)
Translates to: DGKEACAVALQLPGPIGRHPHSW*HCCPAP
Trigger: AGGAGCCGGGCAGCAATGTCACCATGAGTGTGGATG...TCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR TCA 90 bp GAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACC +
Preference number: 2 (lower is better)
Translates to: EGVLGFSGSHHPWATPSSCRYPR*GSGLCT
Trigger: GGTACAAAGGCCTGAACCTCACCGAGGATACCTACA...ACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp AGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGAATCGGGCAATGGTGCGATCTaGGCCGCCAGACTTGGTGAG +
Preference number: 2 (lower is better)
Translates to: RGRRRCSSSCWCPGHWESGNGAI*AARLGE
Trigger: CTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCC...CGATTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR GCA 90 bp GTTGGTCAGGTAGAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCGATGGCAAAGAGGCTTaGGCAGTAGCCCTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: VGQVEGADDRAEAVEVPCDGKEA*AVALQL
Trigger: CAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC...GCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTCTACCTGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR GCA 90 bp CTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: LERSRVWVLLVSLVQTTPMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...TGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR-3UTR CCA 90 bp TCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACACCAAACTGGTGAGGTGGTaGGAGAACTCCTGGTGGACC +
Preference number: 2 (lower is better)
Translates to: SWGSPVLTTLGPRRLVHTKLVRW*ENSWWT
Trigger: GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTT...GGTGTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GTTGGTCAGGTAGAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 2 (lower is better)
Translates to: VGQVEGADDRAEAVEVPCTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...GCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTCTACCTGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCACTGACCAGGGGCTGTaGGGGGATCCCAGAGCAACC +
Preference number: 2 (lower is better)
Translates to: LVLTTWKLVRWWENSWWTTDQGL*GDPRAT
Trigger: GGTTGCTCTGGGATCCCCCCACAGCCCCTGGTCAGT...GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACCTGGGGGAGGAGGATaGCAAAGAGGCTTGCGCAGT +
Preference number: 2 (lower is better)
Translates to: PRGRPGAYHLETGEVVGEPGGGG*QRGLRS
Trigger: ACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGG...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp GTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 2 (lower is better)
Translates to: VWVLLVSLVQTTPASLSCPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR-3UTR CCA 90 bp TCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SLVQTTPASLSCLQLLFSCPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR-3UTR CCA 90 bp GAAGCCCAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCAGCCTGCTCCTGGTTTCATTaGTGCAGACCACACCAGCGT +
Preference number: 2 (lower is better)
Translates to: EAQGVLALHIHADGQVAACSWFH*CRPHQR
Trigger: ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCA...GGCTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
3UTR CAA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGGAAGGAAGCCGAGGAGGGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: KLSAQVSRATSGGRL*KVIAERKEAEEGSL
Trigger: CAGGCTCCCCTCCTCGGCTTCCTTCCTCTCTGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp CTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 2 (lower is better)
Translates to: LGLQVGSQDDRVATEAQGVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...GCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR TCA 90 bp TCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACACCCGTCTAGTCCACACCTaGGGAGTTGGTCAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: SWGSPVLTTLGPRRLVHTRLVHT*GVGQVE
Trigger: TTCTACCTGACCAACTCCTCAGGTGTGGACTAGACG...GGTGTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp GTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGCC +
Preference number: 2 (lower is better)
Translates to: VWVLLVSLVQTTPASLSCGPHPA*WGLILA
Trigger: GGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCC...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR-3UTR CCA 90 bp TGTACCGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTGGTGGGAGAACTCCTaGTGGACCCTAGTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: CTGPATGRAQCGIPGPAEWWENS*WTLVEA
Trigger: GGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCA...CTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGGTCAGGATGACCGTGTaGCCACAGAAGCCCAGGGCG +
Preference number: 2 (lower is better)
Translates to: DRLNCSSKSSSGSIMGKRVRMTV*PQKPRA
Trigger: CGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC...CCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp GAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTCGGAGGTCCAGGGGCATCTaGAACGAGGGGTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: EASLWKHLTDDRVMSILRRSRGI*NEGSWG
Trigger: CCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCT...CCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CCA 90 bp CAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTGGATGGTGGAAGGGCACAGTGTaGAATTCCAGGGCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: QGARPRSRRSRSSSSSGWWKGTV*NSRACR
Trigger: TCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA...CCATCCAGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CAA 90 bp TTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAGAGGAAGGAAGCCGAGGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: LKLSAQVSRATSGGR*LKVIAERKEAEEGS
Trigger: GCTCCCCTCCTCGGCTTCCTTCCTCTCTGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: PRGRPGAYHLETGEVVGELVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp GGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTGAGGTTCAGGCCTTTGGTTGGCAGTCAGGATaGCCGTGTGGCCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: GRGVNPGLVGILGEVQAFGWQSG*PCGHRS
Trigger: GCTTCTGTGGCCACACGGTCATCCTGACTGCCAACC...AAAGGCCTGAACCTCACCGAGGATACCTACAAGCCCCGGATTTACACCTCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR TCA 90 bp GTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACC +
Preference number: 2 (lower is better)
Translates to: VEVPCRAGEGGGALRAVGCRYPR*GSGLCT
Trigger: GGTACAAAGGCCTGAACCTCACCGAGGATACCTACA...ACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR GCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCTCGAGGGCGTCCTGGTaGTTACCACCTGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVSRASW*LPPGNW
Trigger: CCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGA...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR GCA 90 bp CACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAAGGCCTCGGTTCCCGTaGACTGGACCTCATCCAGCA +
Preference number: 2 (lower is better)
Translates to: HHWCRPHQRLSRACSCSSRPRFP*TGPHPA
Trigger: TGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT...TGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 2 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp AGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGAATCGAAACTGGTGAGGTGGTaGGAGAACTCCTGGTGGACC +
Preference number: 2 (lower is better)
Translates to: RGRRRCSSSCWCPGHWESKLVRW*ENSWWT
Trigger: GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTT...CGATTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTCGGGTCAGGATGACCGTGTaGCCACAGAAGCCCAGGGCG +
Preference number: 2 (lower is better)
Translates to: EASLWKHLTDDRVMSILRVRMTV*PQKPRA
Trigger: CGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC...CCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CCA 90 bp ACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: TPGTVCHKGTPGGRGVNPSFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...CGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp CCAGTTGTGACTTCCGTGCACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGGTTGGAGCAGGTCTGTaGGGACACTGGGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: PVVTSVHSRNCLSQRHSRVGAGL*GHWARP
Trigger: AGGCCTGGCCCAGTGTCCCCACAGACCTGCTCCAAC...CCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTGCACGGAAGTCACAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp ATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTTTCGTTGGAGCAGGTCTGTaGGGACACTGGGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: IGDVCHEEPFAEHQGFVFVGAGL*GHWARP
Trigger: AGGCCTGGCCCAGTGTCCCCACAGACCTGCTCCAAC...GAAAACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGACACCCTCTTGTCCTaGAAGAGGAAGCTGGGGTGT +
Preference number: 2 (lower is better)
Translates to: PEQPRGRPGAYHLETGEVDTLLS*KRKLGC
Trigger: ACACCCCAGCTTCCTCTTCCAGGACAAGAGGGTGTC...CACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GCCCCCGTCTGGACTGATAGACCAGTTGTGACTTCCGTGCACTCCAGGAACTGTAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCA +
Preference number: 2 (lower is better)
Translates to: APVWTDRPVVTSVHSRNCRSQPR*LSKIWP
Trigger: TGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCT...ACAGTTCCTGGAGTGCACGGAAGTCACAACTGGTCTATCAGTCCAGACGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587251.5
3UTR-3UTR TCA 90 bp AGAGCATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTGAGCCGCCAGACTCCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: RASGLCFRRQWCDLSRQTPAHSR*WTGRSP
Trigger: GGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGG...AGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR TCA 90 bp TACAGGGACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGGGTTGGCAGTCAGGATaGCCGTGTGGCCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: YRDRLNCSSKSSSGSIMGGWQSG*PCGHRS
Trigger: GCTTCTGTGGCCACACGGTCATCCTGACTGCCAACC...CCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR GCA 90 bp GGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGGGCTTTCGAGGGCGTCCTGGTaGTTACCACCTGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: GTVCHKGTPGGRGVNPGLSRASW*LPPGNW
Trigger: CCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGA...AAGCCCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR GCA 90 bp CAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACCATGGGAGGGAAGTGGGCTaGGTTAGGAGCCGGGGCACT +
Preference number: 2 (lower is better)
Translates to: QGDVNPSGVEVPEKVPDHGREVG*VRSRGT
Trigger: AGTGCCCCGGCTCCTAACGCAGCCCACTTCCCTCCC...ATGGTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
3UTR-3UTR CCA 90 bp CTTCCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATTGGGAGAACTCCTGGTaGACCCTAGTGGAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: LPALEIGDVCHEEPFAEHWENSW*TLVEAF
Trigger: GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCA...ATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCATGGTGGGAGAACTCCTaGTGGACCCTAGTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAWWENS*WTLVEA
Trigger: GGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCA...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp AGAGCATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTGAGCCGCCAGACTACTGACCAGGGGCTGTaGGGGGATCCCAGAGCAACC +
Preference number: 2 (lower is better)
Translates to: RASGLCFRRQWCDLSRQTTDQGL*GDPRAT
Trigger: GGTTGCTCTGGGATCCCCCCACAGCCCCTGGTCAGT...AGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp TGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTCAGGATGACCGTGTaGCCACAGAAGCCCAGGGCG +
Preference number: 2 (lower is better)
Translates to: WSLEGLVGVVSVVRGGLEVRMTV*PQKPRA
Trigger: CGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC...TTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp GAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTCCTGGGGGAGGAGGATaGCAAAGAGGCTTGCGCAGT +
Preference number: 2 (lower is better)
Translates to: EIGDVCHEEPFAEHQGFVPGGGG*QRGLRS
Trigger: ACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGG...AACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp ATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTTTCGCAGGGCGTCCCCTGTaGCCACTGCATAGGCATACA +
Preference number: 2 (lower is better)
Translates to: IGDVCHEEPFAEHQGFVFAGRPL*PLHRHT
Trigger: TGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGC...GAAAACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCTGGAAGGGCACAGTGTaGAATTCCAGGGCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVWKGTV*NSRACR
Trigger: TCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CTTCCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATGACACCCTCTTGTCCTaGAAGAGGAAGCTGGGGTGT +
Preference number: 2 (lower is better)
Translates to: LPALEIGDVCHEEPFAEHDTLLS*KRKLGC
Trigger: ACACCCCAGCTTCCTCTTCCAGGACAAGAGGGTGTC...ATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGTGTTTTCGTAGGCAATaGTGCGATCTGAGCCGCCAG +
Preference number: 2 (lower is better)
Translates to: PEQPRGRPGAYHLETGEVCFRRQ*CDLSRQ
Trigger: CTGGCGGCTCAGATCGCACCATTGCCTACGAAAACA...CACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
3UTR CAA 90 bp GTCTTCTTCTGGAACAGGGCCTCGTGGCTCCAGTACAGGGACAGGTaGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAG +
Preference number: 2 (lower is better)
Translates to: VFFWNRASWLQYRDR*NCSSKSSSGSIMGK
Trigger: CTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCAGAAGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGACTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: YHLETGEVVGELLVDPSGLVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACC +
Preference number: 2 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVCRYPR*GSGLCT
Trigger: GGTACAAAGGCCTGAACCTCACCGAGGATACCTACA...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR GCA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGGATGGCAAAGAGGCTTaGGCAGTAGCCCTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRDGKEA*AVALQL
Trigger: CAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTGGTGGGAGAACTCCTaGTGGACCCTAGTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLWWENS*WTLVEA
Trigger: GGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCA...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp TGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGGGCTTGTAGGTGGAAACTGGTGAGGTaGTGGGAGAACTCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: CLSQRHSRWARCKSGACRWKLVR*WENSWW
Trigger: CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA...CCTACAAGCCCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp TGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGCAGGGCGTCCCCTGTaGCCACTGCATAGGCATACA +
Preference number: 2 (lower is better)
Translates to: WSLEGLVGVVSVVRGGLEAGRPL*PLHRHT
Trigger: TGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGC...TTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR TCA 90 bp CAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAACTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: QLKELLREHHGEADLLHQLVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...TTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGAAGAGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 2 (lower is better)
Translates to: GLVGVVSVVRGGLEVIRRAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...TCTTCTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCTGGGAGAACTCCTGGTaGACCCTAGTGGAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: HSRNCLSQRHSRWARCKSWENSW*TLVEAF
Trigger: GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCA...GGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp TCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTAAACTGGTGAGGTGGTaGGAGAACTCCTGGTGGACC +
Preference number: 2 (lower is better)
Translates to: SQRHSRWARCKSGACRYPKLVRW*ENSWWT
Trigger: GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTT...AGGATACCTACAAGCCCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTAAACTGGTGAGGTGGTaGGAGAACTCCTGGTGGACC +
Preference number: 2 (lower is better)
Translates to: EIGDVCHEEPFAEHQGFVKLVRW*ENSWWT
Trigger: GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTT...AACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTGGAAACTGGTGAGGTaGTGGGAGAACTCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLWKLVR*WENSWW
Trigger: CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTGGAAACTGGTGAGGTaGTGGGAGAACTCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRWKLVR*WENSWW
Trigger: CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp AAGCCTTCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTACTGACCAGGGGCTGTaGGGGGATCCCAGAGCAACC +
Preference number: 2 (lower is better)
Translates to: KPSSNFLKLSAQVSRATSTDQGL*GDPRAT
Trigger: GGTTGCTCTGGGATCCCCCCACAGCCCCTGGTCAGT...AGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp CCAGTTGTGACTTCCGTGCACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGGCAGAGGCCAGCTTGTaGAAGCACTTGACTGACGAC +
Preference number: 2 (lower is better)
Translates to: PVVTSVHSRNCLSQRHSRAEASL*KHLTDD
Trigger: GTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC...CCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTGCACGGAAGTCACAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp AGGGACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGGCAGAGGCCAGCTTGTaGAAGCACTTGACTGACGAC +
Preference number: 2 (lower is better)
Translates to: RDRLNCSSKSSSGSIMGKAEASL*KHLTDD
Trigger: GTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC...CTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTGGAAGGGCACAGTGTaGAATTCCAGGGCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRWKGTV*NSRACR
Trigger: TCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCAGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 2 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR GCA 90 bp GGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGTCGAGGGCGTCCTGGTaGTTACCACCTGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: GRTGRGSICSQRGLGSNQSRASW*LPPGNW
Trigger: CCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGA...CTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GGCTTGGAAGTAATCAGAAGAATATTTGACCAAAGGCCCCCGTCTGGACTGATAAGGTCCAGGGGCATCTaGAACGAGGGGTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: GLEVIRRIFDQRPPSGLIRSRGI*NEGSWG
Trigger: CCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCT...TATCAGTCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp AAGCCTTCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTCTGGGCAGCAGCAGTTaGAGCAGGTCTGTGGGGACA +
Preference number: 2 (lower is better)
Translates to: KPSSNFLKLSAQVSRATSLGSSS*SRSVGT
Trigger: TGTCCCCACAGACCTGCTCCAACTGCTGCTGCCCAG...AGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp TGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAATACCGGGCCAGCAACTaGAAGGGCACAGTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: WSLEGLVGVVSVVRGGLEYRASN*KGTVWN
Trigger: ATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTA...TTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp TCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCCAAAGGCCCCCGTCTaGACTGATAGACCAGTTGTG +
Preference number: 2 (lower is better)
Translates to: SSNFLKLSAQVSRATSGGPKAPV*TDRPVV
Trigger: CACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGG...GCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp CACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 2 (lower is better)
Translates to: HSRNCLSQRHSRWARCKSVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...GGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CCA 90 bp GGCTTGGAAGTAATCAGAAGAATATTTGACCAAAGGCCCCCGTCTGGACTGATAGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 2 (lower is better)
Translates to: GLEVIRRIFDQRPPSGLIAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...TATCAGTCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGTGGGAGAACTCCTGGTaGACCCTAGTGGAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: GRTGRGSICSQRGLGSNQWENSW*TLVEAF
Trigger: GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCA...CTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CCA 90 bp GGCTTGGAAGTAATCAGAAGAATATTTGACCAAAGGCCCCCGTCTGGACTGATAACTGACCAGGGGCTGTaGGGGGATCCCAGAGCAACC +
Preference number: 2 (lower is better)
Translates to: GLEVIRRIFDQRPPSGLITDQGL*GDPRAT
Trigger: GGTTGCTCTGGGATCCCCCCACAGCCCCTGGTCAGT...TATCAGTCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR TCA 90 bp GGCTTGGAAGTAATCAGAAGAATATTTGACCAAAGGCCCCCGTCTGGACTGATAGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 2 (lower is better)
Translates to: GLEVIRRIFDQRPPSGLIVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...TATCAGTCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR TCA 90 bp GTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGAAGAATATTTGACCAAATGACCTCAGACCAGTaGCAAGGGCAGACTGACCAG +
Preference number: 2 (lower is better)
Translates to: VVSVVRGGLEVIRRIFDQMTSDQ*QGQTDQ
Trigger: CTGGTCAGTCTGCCCTTGTCACTGGTCTGAGGTCAT...TTGGTCAAATATTCTTCTGATTACTTCCAAGCCCCCTCTGACTACAGATACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp CAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGCCTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 3 (lower is better)
Translates to: QVGSQDDRVATEAQGVLASTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...GGCGAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587310.5
3UTR-3UTR CAA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGACCGTGCGGAAGCCGTaGAAGTGCCCTGCCGGGCAG +
Preference number: 3 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGTVRKP*KCPAGQ
Trigger: CTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGT...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp CACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 3 (lower is better)
Translates to: HQRLSRACSCSSASPGTCSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...GCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR CCA 72 bp GGAAGCCGAGGAGGGGAGCCTGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGC +
Preference number: 3 (lower is better)
Translates to: GSRGGEPAVRAS*GSPVLTTLGPR
Trigger: GCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCCTCCTCGGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 72 bp CCTGATCCTTGCCCGAAGGCAGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCCAGGGCCCGGCAGACG +
Preference number: 3 (lower is better)
Translates to: PDPCPKAALPRA*VAFSKPRARQT
Trigger: CGTCTGCCGGGCCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGCTGCCTTCGGGCAAGGATCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR GCA 72 bp GGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTaGCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCT +
Preference number: 3 (lower is better)
Translates to: GADDRAEAVEVP*RAGEGGGALRA
Trigger: AGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR GCA 72 bp GCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTaGAGACCACACCAGCGTCTCTCTCGTGCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: ASAGRCAPAHHW*RPHQRLSRACS
Trigger: ACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CAA 90 bp CTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 3 (lower is better)
Translates to: LGLQVGSQDDRVATEAQGAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...GCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CAA 90 bp TTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 3 (lower is better)
Translates to: LVQTTPASLSCLQLLFSQSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...CTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR CCA 72 bp GGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTaGCGCCCCCATCGGCCAGCCGCATGTCACCATCGT +
Preference number: 3 (lower is better)
Translates to: GLCRRSPRGPGW*RPHRPAACHHR
Trigger: ACGATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
3UTR-3UTR CAA 90 bp GGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGACCAGGACACCCTCTaGTCCTGGAAGAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: GADDRAEAVEVPCRAGEGDQDTL*SWKRKL
Trigger: CAGCTTCCTCTTCCAGGACAAGAGGGTGTCCTGGTC...TCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp TCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCTGCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: SQPRWLSKIWPRASESSLLSCLQ*LFSQPR
Trigger: CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAG...CAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587310.5
3UTR TCA 72 bp CGTAGGCAATGGTGCGATCTGAGCCGCCAGACTTGGTaGGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: RRQWCDLSRQTW*GPGQGARPRSR
Trigger: CCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCCTACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 72 bp GCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCACTGGACCTCATCCAG +
Preference number: 3 (lower is better)
Translates to: ALQPAQGLAVGQ*GLGSRALDLIQ
Trigger: CTGGATGAGGTCCAGTGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR CCA 72 bp CCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTaGTGTCCAGGGCACTGGGAATCGCAGCCTTCCAGC +
Preference number: 3 (lower is better)
Translates to: PGRGRRRCSSSC*CPGHWESQPSS
Trigger: GCTGGAAGGCTGCGATTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 72 bp ATGGACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTaGCCAAGGGCCTCCGAGAGCTCCCTGGAGAGGTCC +
Preference number: 3 (lower is better)
Translates to: MDRSQPRWLSKI*PRASESSLERS
Trigger: GGACCTCTCCAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
3UTR CCA 72 bp ACTGGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCAGCCGCATGTCACCAT +
Preference number: 3 (lower is better)
Translates to: TGLCRRSPRGPG*WRPHRPAACHH
Trigger: ATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
3UTR-3UTR CAA 90 bp GACACTGGGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAAGGATGGCAAAGAGGCTaGCGCAGTAGCCCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: DTGPGLGLRQGLEVPGQEGWQRG*RSSPAA
Trigger: AGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCC...TTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR TCA 72 bp AGAAGCCCAGGGCGTCCTCGCCCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCCGCTGGCTGTCAAAGA +
Preference number: 3 (lower is better)
Translates to: RSPGRPRPAHSR*WTGRSPAGCQR
Trigger: TCTTTGACAGCCAGCGGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
3UTR CCA 72 bp AGAGCTCCCTGGAGAGGTCCAGGGTGTGGGTGCTCCTaGTTTCTAAGAAGGGGCGGGAGGGAAGTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: RAPWRGPGCGCS*FLRRGGREVGC
Trigger: GCAGCCCACTTCCCTCCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGGGAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
3UTR-3UTR CAA 90 bp GAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 3 (lower is better)
Translates to: EQPRGRPGAYHLETGEVVAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...CACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CAA 90 bp GAGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAG +
Preference number: 3 (lower is better)
Translates to: EPPDLVRPRTGSSSEEQETSGGR*LKVIAE
Trigger: CTCTGCAATGACCTTCAACAACCGGCCACCAGATGT...CTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp CTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCACACTCATGGTGACATaGCTGCCCGGCTCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: LQVGSQDDRVATEAQGVLTLMVT*LPGSFH
Trigger: GTGGAAGGAGCCGGGCAGCAATGTCACCATGAGTGT...GAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CAA 90 bp CAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTGGATGGGTGAGGTTCAGGCCTTaGTACCGGGCCAGCAACTGG +
Preference number: 3 (lower is better)
Translates to: QGARPRSRRSRSSSSSGWVRFRP*YRASNW
Trigger: CCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCAC...CCATCCAGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp CTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTACCGTGCGGAAGCCGTaGAAGTGCCCTGCCGGGCAG +
Preference number: 3 (lower is better)
Translates to: LETGEVVGELLVDPSGSLTVRKP*KCPAGQ
Trigger: CTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGT...AAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 72 bp CTCACCACCCTTGGGCCACGCCGTCTAGTCCACACCTaGGGAGTTGGTCAGGTAGAAGGGGCGGATGACCGT +
Preference number: 3 (lower is better)
Translates to: LTTLGPRRLVHT*GVGQVEGADDR
Trigger: ACGGTCATCCGCCCCTTCTACCTGACCAACTCCTCAGGTGTGGACTAGACGGCGTGGCCCAAGGGTGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR GCA 72 bp GCAGAGCTTCTCCAGCAGGGCGTCCCCTGTGGCCACTaGATAGGCATACAGGTCCAGGGGCATCTGGAACGA +
Preference number: 3 (lower is better)
Translates to: AELLQQGVPCGH*IGIQVQGHLER
Trigger: TCGTTCCAGATGCCCCTGGACCTGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGCTGGAGAAGCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR GCA 72 bp TGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCA +
Preference number: 3 (lower is better)
Translates to: CRPHQRLSRACS*SSASPGTCSRP
Trigger: TGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
3UTR CCA 72 bp TGCACATTCACGCTGATGGACAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGC +
Preference number: 3 (lower is better)
Translates to: CTFTLMDRSQPR*LSKIWPRASES
Trigger: GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTCCATCAGCGTGAATGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
3UTR-3UTR CAA 90 bp CTGGAACGAGGGGTCCTGGGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCTCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: LERGVLGEEDGKEACAVASGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...GGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CAA 90 bp TCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACACCTCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: SWGSPVLTTLGPRRLVHTSGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...GGTGTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp GGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGGGCTTGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 3 (lower is better)
Translates to: GTVCHKGTPGGRGVNPGLAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...AAGCCCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CAA 90 bp CGATCTGAGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGTACAGGGACAGGTaGAACTGCAGCTCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: RSEPPDLVRPRTGSSSEEQYRDR*NCSSKS
Trigger: GCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTG...CTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGGTGAGGTTCAGGCCTTaGTACCGGGCCAGCAACTGG +
Preference number: 3 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRVRFRP*YRASNW
Trigger: CCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCAC...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp ACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGACACTCATGGTGACATaGCTGCCCGGCTCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: TPASLSCLQLLFSQPRDLTLMVT*LPGSFH
Trigger: GTGGAAGGAGCCGGGCAGCAATGTCACCATGAGTGT...CAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
3UTR TCA 72 bp CACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTaGCGTCTGCCACGAAGAGCCCTTCGCAGAGCATCA +
Preference number: 3 (lower is better)
Translates to: HWESQPSSPRNR*RLPRRALRRAS
Trigger: TGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR GCA 72 bp AGGGCCTCGTGGCTCCAGTACAGGGACAGGTTGAACTaGAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGG +
Preference number: 3 (lower is better)
Translates to: RASWLQYRDRLN*SSKSSSGSIMG
Trigger: CCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTGGAGCCACGAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR GCA 72 bp TCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTG +
Preference number: 3 (lower is better)
Translates to: SPLVQTTPASLS*LQLLFSQPRDL
Trigger: CAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
3UTR-3UTR CAA 90 bp AGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGTCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: SNLEGVLVLTTWKLVRWWSGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...CCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp CAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCACACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAG +
Preference number: 3 (lower is better)
Translates to: QGTGNRSLPALEIGDVCHTSGGR*LKVIAE
Trigger: CTCTGCAATGACCTTCAACAACCGGCCACCAGATGT...GTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp TCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACACCCCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: SWGSPVLTTLGPRRLVHTPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...GGTGTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp AAGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGCTGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 3 (lower is better)
Translates to: KVPDHGHTLSIHTHGDIAAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...AGCAATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CAA 90 bp GGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTACACTCATGGTGACATaGCTGCCCGGCTCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: GPATGRAQCGIPGPAESSTLMVT*LPGSFH
Trigger: GTGGAAGGAGCCGGGCAGCAATGTCACCATGAGTGT...AGAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CAA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAGGATGGCAAAGAGGCTaGCGCAGTAGCCCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: YHLETGEVVGELLVDPSGGWQRG*RSSPAA
Trigger: AGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCC...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CAA 90 bp GAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGTAGTCAGAGGGGGCTaGGAAGTAATCAGAAGAATA +
Preference number: 3 (lower is better)
Translates to: EGADDRAEAVEVPCRAGEVVRGG*EVIRRI
Trigger: TATTCTTCTGATTACTTCCAAGCCCCCTCTGACTAC...TTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCAGTGCTCTTCGAGCTGTaGGTGTCCAGGGCACTGGGA +
Preference number: 3 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAVLFEL*VSRALG
Trigger: TCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCAC...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp GGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAG +
Preference number: 3 (lower is better)
Translates to: GVLVLTTWKLVRWWENSWTSGGR*LKVIAE
Trigger: CTCTGCAATGACCTTCAACAACCGGCCACCAGATGT...CCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp GTTGGTCAGGTAGAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: VGQVEGADDRAEAVEVPCPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...GCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTCTACCTGACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 72 bp GCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACCGGGCCAGCAACTGGA +
Preference number: 3 (lower is better)
Translates to: ARCKSGACRYPR*GSGLCTGPATG
Trigger: TCCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCACCGAGGATACCTACAAGCCCCGGATTTACACCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 72 bp CATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTaGGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAG +
Preference number: 3 (lower is better)
Translates to: HQGFVFVGNGAI*AARLGEAQDRE
Trigger: CTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR GCA 72 bp AATCGCAGCCTTCCAGCCCTCGAAATCGGTGACGTCTaGCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTT +
Preference number: 3 (lower is better)
Translates to: NRSLPALEIGDV*HEEPFAEHQGF
Trigger: AAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR GCA 72 bp GTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTG +
Preference number: 3 (lower is better)
Translates to: VSLVQTTPASLS*LQLLFSQPRDL
Trigger: CAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
3UTR CCA 72 bp AGGGCCTGCAGAGTCTTCTTCTGGAACAGGGCCTCGTaGCTCCAGTACAGGGACAGGTTGAACTGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: RACRVFFWNRAS*LQYRDRLNCSS
Trigger: TGAGCTGCAGTTCAACCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCAGAAGAAGACTCTGCAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 72 bp ACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTTCTaGAACAGGGCCTCGTGGCTCCAGTACAGGGACAGG +
Preference number: 3 (lower is better)
Translates to: TVWNSRACRVFF*NRASWLQYRDR
Trigger: CCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCAGAAGAAGACTCTGCAGGCCCTGGAATTCCACACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 72 bp GTGGGCTGCGTTAGGAGCCGGGGCACTGCCACTCTCTaGGGTCAGTGTCTTCATCTGAAAGTGAGGGATTTG +
Preference number: 3 (lower is better)
Translates to: VGCVRSRGTATL*GQCLHLKVRDL
Trigger: CAAATCCCTCACTTTCAGATGAAGACACTGACCCCAGAGAGTGGCAGTGCCCCGGCTCCTAACGCAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
3UTR-3UTR CAA 90 bp CCAGTTGTGACTTCCGTGCACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: PVVTSVHSRNCLSQRHSRSGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...CCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTGCACGGAAGTCACAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp GGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTCCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: GAYHLETGEVVGELLVDPPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...AGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp CTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTAGCTTGTGGAAGCACTaGACTGACGACAGGGTGATG +
Preference number: 3 (lower is better)
Translates to: LEIGDVCHEEPFAEHQGFSLWKH*TDDRVM
Trigger: CATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCT...AAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CAA 90 bp CTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTCAGTACAGGGACAGGTaGAACTGCAGCTCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: LEIGDVCHEEPFAEHQGFQYRDR*NCSSKS
Trigger: GCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTG...AAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CCA 72 bp CACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTaGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCT +
Preference number: 3 (lower is better)
Translates to: HSRNCLSQRHSR*ARCKSGACRYP
Trigger: AGGATACCTACAAGCCCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp TACAGGGACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAG +
Preference number: 3 (lower is better)
Translates to: YRDRLNCSSKSSSGSIMGTSGGR*LKVIAE
Trigger: CTCTGCAATGACCTTCAACAACCGGCCACCAGATGT...CCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCACCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp CTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: LETGEVVGELLVDPSGSLPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...AAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp CAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACCATACACTCATGGTGACATaGCTGCCCGGCTCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: QGDVNPSGVEVPEKVPDHTLMVT*LPGSFH
Trigger: GTGGAAGGAGCCGGGCAGCAATGTCACCATGAGTGT...ATGGTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR-3UTR CAA 90 bp AAGCCTTCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGATGGCAAAGAGGCTaGCGCAGTAGCCCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: KPSSNFLKLSAQVSRATSGWQRG*RSSPAA
Trigger: AGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCC...AGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CAA 90 bp AAGCCTTCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGTGAGGTTCAGGCCTTaGTACCGGGCCAGCAACTGG +
Preference number: 3 (lower is better)
Translates to: KPSSNFLKLSAQVSRATSVRFRP*YRASNW
Trigger: CCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCAC...AGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 72 bp CCCATAGGCAGAGGCCAGCTTGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAATCCTTCGGGAGTAGAA +
Preference number: 3 (lower is better)
Translates to: PIGRGQLVEALD*RQGDVNPSGVE
Trigger: TTCTACTCCCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGCCTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
3UTR TCA 72 bp GACCAAAGGCCCCCGTCTGGACTGATAGACCAGTTGTaGCTTCCGTGCACTCCAGGAACTGTCTGTCACAAA +
Preference number: 3 (lower is better)
Translates to: DQRPPSGLIDQL*LPCTPGTVCHK
Trigger: TTTGTGACAGACAGTTCCTGGAGTGCACGGAAGTCACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp GAGGAAGCTGGGGTGTTGTGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAG +
Preference number: 3 (lower is better)
Translates to: EEAGVLWSLEGLVGVVSVTSGGR*LKVIAE
Trigger: CTCTGCAATGACCTTCAACAACCGGCCACCAGATGT...TACAGATACTACCCCTACCAGTCCTTCCAGACTCCACAACACCCCAGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp AAGCCTTCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTTCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: KPSSNFLKLSAQVSRATSSGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...AGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR-3UTR CAA 90 bp GGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGAGCTTGTGGAAGCACTaGACTGACGACAGGGTGATG +
Preference number: 3 (lower is better)
Translates to: GRTGRGSICSQRGLGSNQSLWKH*TDDRVM
Trigger: CATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCT...CTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
3UTR-3UTR CAA 90 bp CTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTAGTCAGAGGGGGCTaGGAAGTAATCAGAAGAATA +
Preference number: 3 (lower is better)
Translates to: LEIGDVCHEEPFAEHQGFVVRGG*EVIRRI
Trigger: TATTCTTCTGATTACTTCCAAGCCCCCTCTGACTAC...AAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR TCA 72 bp AGTCAGAGGGGGCTTGGAAGTAATCAGAAGAATATTTaGCCAAAGGCCCCCGTCTGGACTGATAGACCAGTT +
Preference number: 3 (lower is better)
Translates to: SQRGLGSNQKNI*PKAPVWTDRPV
Trigger: AACTGGTCTATCAGTCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCCCCCTCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CACACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTGCAGACCAGCCTCCGCAGGGAGGTaGGCCCCCGCTCACCATTGG +
Preference number: 4 (lower is better)
Translates to: HTGASAGRCAPAHHWCRPASAGR*APAHHW
Trigger: CCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGC...TGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp GGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: GEEDGKEACAVALQLPGPPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...GGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCACCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: GLCRRSPRGPGWWRPHRPPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp CTGGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: LASVEDLHAALVGGAPIGPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...GCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp CACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACAGACCCCAGGGCACACTaGGGCCTCCGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HWGLRREVRPRSPLVQTTDPRAH*GLRREV
Trigger: CACCTCCCTGCGGAGGCCCCAGTGTGCCCTGGGGTC...TGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp GGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAGACCCCAGGGCACACTaGGGCCTCCGCAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GLCRRSPRGPGWWRPHRPDPRAH*GLRREV
Trigger: CACCTCCCTGCGGAGGCCCCAGTGTGCCCTGGGGTC...TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR TCA 90 bp AGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAGCCGCATGTCACCTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: RSPRGPGWWRPHRPAACHLAVGQ*GLGSRA
Trigger: TGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAG...GTGACATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR TCA 90 bp CGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGCCGTGCGGAAGCCGTTaGAGTGCCCTGCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAGEGGGALRAVGVQGTGPCGSR*SALPGR
Trigger: CCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGG...CCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GGCACACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTGCAGACGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: GTLGPPQGGAPPLTIGADEGSWP*LDAQIL
Trigger: CAGGATCTGGGCATCCAGGCACGGCCATGACCCCTC...GTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp GTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGGCCTCCGCAGGGAGGTaGGCCCCCGCTCACCATTGG +
Preference number: 4 (lower is better)
Translates to: VRPRSPLVQTTPASLSCLASAGR*APAHHW
Trigger: CCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGC...CAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp GCCCGGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: ARLLPQGLGLQVGSQDDRASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...ACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp CTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: LQVGSQDDRVATEAQGVLPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...GAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp CTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: LQLLFSQPRDLQSASEASPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...CGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp GAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: EVPCRAGEGGGALRAVGVPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...GACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GAGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: EPPDLVRPRTGSSSEEQEISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...CTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GGGGCGGGAGGGAAGTGGGCTGCGTTAGGAGCCGGGGCACTGCCACTCTCTGGGTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GAGGKWAALGAGALPLSGSRACS*SSASPG
Trigger: CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGA...CCCAGAGAGTGGCAGTGCCCCGGCTCCTAACGCAGCCCACTTCCCTCCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR GCA 90 bp CCCAGGGCACACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTGCCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PRAHWGLRREVRPRSPLVPASLS*LQLLFS
Trigger: GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGG...CACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTGTGCCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp GACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DRAEAVEVPCRAGEGGGAAATAV*SLLASS
Trigger: GCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGC...AGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCAGCCCCGCTGGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QGVLALHIHADGQVAAPLAATAV*SLLASS
Trigger: GCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGC...CAGCGGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GAAGCCCAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCAGCCGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: EAQGVLALHIHADGQVAAASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...GGCTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: GAPPLTIGADHTSVSLVPASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...AGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp TGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: CAPAHHWCRPHQRLSRACISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...GCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp GGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GEEDGKEACAVALQLPGPCPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...GGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GTTGGTGGCGCCCCCATCGGCCAGCCGCATGTCACCATCGTTCACGCCTGGTGCTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VGGAPIGQPHVTIVHAWCCPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...GCACCAGGCGTGAACGATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR CCA 90 bp GAGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EPPDLVRPRTGSSSEEQECPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...CTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GRSPAGCQRSGQGPPRAPALPRA*VAFSKP
Trigger: GGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGC...GGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GLCRRSPRGPGWWRPHRPALPRA*VAFSKP
Trigger: GGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGC...TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGALPRA*VAFSKP
Trigger: GGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGC...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGCTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: GLGLQVGSQDDRVATEAQLAVGQ*GLGSRA
Trigger: TGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAG...CTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588198.5
CDS-3UTR TCA 90 bp CTGGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LASVEDLHAALVGGAPIGPAHSR*WTGRSP
Trigger: GGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGG...GCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR GCA 90 bp GACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: DRAEAVEVPCRAGEGGGAEGSWP*LDAQIL
Trigger: CAGGATCTGGGCATCCAGGCACGGCCATGACCCCTC...AGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CTGGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LASVEDLHAALVGGAPIGMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...GCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp GGGGCGGGAGGGAAGTGGGCTGCGTTAGGAGCCGGGGCACTGCCACTCTCTGGGGTCCCCTGTGGCCACTaGATAGGCATACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GAGGKWAALGAGALPLSGVPCGH*IGIQVQ
Trigger: CTGGACCTGTATGCCTATGCAGTGGCCACAGGGGAC...CCCAGAGAGTGGCAGTGCCCCGGCTCCTAACGCAGCCCACTTCCCTCCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR GCA 90 bp GCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGCCGTTGAAGTGCCCTaGCGGGCAGGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGQGKEEVLFELLVSRALAVEVP*RAGEGG
Trigger: TCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGC...CAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GGGGCGGGAGGGAAGTGGGCTGCGTTAGGAGCCGGGGCACTGCCACTCTCTGGGGGAAGGCTCCATTGGTaGAGACCACACCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GAGGKWAALGAGALPLSGGRLHW*RPHQRL
Trigger: GAGACGCTGGTGTGGTCTGCACCAATGGAGCCTTCC...CCCAGAGAGTGGCAGTGCCCCGGCTCCTAACGCAGCCCACTTCCCTCCCGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR GCA 90 bp GACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCGGGAGGGAAGTGGGCTaGGTTAGGAGCCGGGGCACT +
Preference number: 4 (lower is better)
Translates to: DRSQPRWLSKIWPRASESGREVG*VRSRGT
Trigger: AGTGCCCCGGCTCCTAACGCAGCCCACTTCCCTCCC...GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CCA 90 bp GAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAGCTTGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EACAVALQLPGPIGRGQLAATAV*SLLASS
Trigger: GCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGC...AAGCTGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp CTCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: LREHHGEADLLHQALHLLPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...GAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: CSEGVLGFSGSHHPWATPPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...CGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GAGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: EPPDLVRPRTGSSSEEQEPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...CTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASWGSPVLTTLGPRRLVHCPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...GTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DRSQPRWLSKIWPRASESALPRA*VAFSKP
Trigger: GGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGC...GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GGACACTGGGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAGTCAGGATGACCGTGTaGCCACAGAAGCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GHWARPRPASRPRSSRPGVRMTV*PQKPRA
Trigger: CGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC...TCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GGAGGGAAGTGGGCTGCGTTAGGAGCCGGGGCACTGCCACTCTCTGGGGTCAGTAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGKWAALGAGALPLSGVSSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...ACTGACCCCAGAGAGTGGCAGTGCCCCGGCTCCTAACGCAGCCCACTTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CCA 90 bp GGCCCTGGTTGGTGGCGCCCCCATCGGCCAGCCGCATGTCACCATCGTTCACGCGGGCTCAGCTCACCTTaGGTTCCTGCAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPGWWRPHRPAACHHRSRGLSSP*VPATSS
Trigger: GCTGCTGGTTGCAGGAACCCAAGGTGAGCTGAGCCC...GCGTGAACGATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR CCA 90 bp AGCTCCCTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCTAAGAAGGGGCGGGGGGCGGGAGGGAAGTaGGCTGCGTTAGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SSLERSRVWVLLVSKKGRGAGGK*AALGAG
Trigger: CCCGGCTCCTAACGCAGCCCACTTCCCTCCCGCCCC...CCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGGGAGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR TCA 90 bp GACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCCAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DRSQPRWLSKIWPRASESQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588198.5
CDS-3UTR TCA 90 bp GAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EVRPRSPLVQTTPASLSCQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR TCA 90 bp CAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QVAAPLAVKDLAKGLRELPAHSR*WTGRSP
Trigger: GGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGG...GAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR TCA 90 bp TGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGGGCAATGGTGCGATCTaGGCCGCCAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: CSEGVLGFSGSHHPWATPGNGAI*AARLGE
Trigger: CTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCC...CGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGAGCCCTCGAAATCGGTaGCGTCTGCCACGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGSPRNR*RLPRRA
Trigger: GGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCT...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTAGCCCTCGAAATCGGTaGCGTCTGCCACGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: DRAEAVEVPCRAGEGGGASPRNR*RLPRRA
Trigger: GGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCT...AGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp CTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGACGCCTGAACCCAGGTaGGCCCCCGGGAACCTCCAA +
Preference number: 4 (lower is better)
Translates to: LQLLFSQPRDLQSASEASTPEPR*APGNLQ
Trigger: TTGGAGGTTCCCGGGGGCTCACCTGGGTTCAGGCGT...CGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588990.5
CDS-3UTR GCA 90 bp GGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAACTGTAGGTGCCCAGATCCTGGCTaGGGTAGCTGCAACGGCCGT +
Preference number: 4 (lower is better)
Translates to: GQASACVKASKFQARNCRCPDPG*GSCNGR
Trigger: ACGGCCGTTGCAGCTACCGCAGCCAGGATCTGGGCA...CCTACAGTTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR GCA 90 bp CGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: RAGEGGGALRAVGVQGTGEGSWP*LDAQIL
Trigger: CAGGATCTGGGCATCCAGGCACGGCCATGACCCCTC...CCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: DRSQPRWLSKIWPRASESEGSWP*LDAQIL
Trigger: CAGGATCTGGGCATCCAGGCACGGCCATGACCCCTC...GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR GCA 90 bp GAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: EVRPRSPLVQTTPASLSCEGSWP*LDAQIL
Trigger: CAGGATCTGGGCATCCAGGCACGGCCATGACCCCTC...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp GGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GAPPLTIGADHTSVSLVPMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...AGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp TGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGAGGCCTCGGTTCCCGTaGACTGGACCTCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: CSEGVLGFSGSHHPWATPRPRFP*TGPHPA
Trigger: TGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT...CGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000591778.5
CDS-3UTR GCA 90 bp GCCCGGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARLLPQGLGLQVGSQDDRSRACS*SSASPG
Trigger: CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGA...ACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR GCA 90 bp CTGGAACGAGGGGTCCTGGGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCGGCCAGGCCTCGGCCTaGGTCAAGGCCTCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LERGVLGEEDGKEACAVAGQASA*VKASKF
Trigger: GAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC...GGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR GCA 90 bp CAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAGCCGTTGAAGTGCCCTaGCGGGCAGGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QRGLRSSPAAAWPHRQRPAVEVP*RAGEGG
Trigger: TCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGC...TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: VEVPCRAGEGGGALRAVGASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...ACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: HQRLSRACSCSSASPGTCASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...GCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp GTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: VRPRSPLVQTTPASLSCLPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...CAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp TGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CSEGVLGFSGSHHPWATPRSQPR*LSKIWP
Trigger: TGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCT...CGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp CAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCAGCCCCGCTGAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QGVLALHIHADGQVAAPLRSQPR*LSKIWP
Trigger: TGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCT...CAGCGGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCGTCAGGATGACCGTGTaGCCACAGAAGCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: DRSQPRWLSKIWPRASESVRMTV*PQKPRA
Trigger: CGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC...GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GGAGGGAAGTGGGCTGCGTTAGGAGCCGGGGCACTGCCACTCTCTGGGGTCAGTGTCAGGATGACCGTGTaGCCACAGAAGCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GGKWAALGAGALPLSGVSVRMTV*PQKPRA
Trigger: CGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC...ACTGACCCCAGAGAGTGGCAGTGCCCCGGCTCCTAACGCAGCCCACTTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CCA 90 bp GGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAACTGTAGGTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GQASACVKASKFQARNCRSFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...CCTACAGTTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGTTGGAGCAGGTCTGTaGGGACACTGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGLQVGSQDDRVATEAQVGAGL*GHWARP
Trigger: AGGCCTGGCCCAGTGTCCCCACAGACCTGCTCCAAC...CTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCTGGGCAGCAGCAGTTaGAGCAGGTCTGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGLGSSS*SRSVGT
Trigger: TGTCCCCACAGACCTGCTCCAACTGCTGCTGCCCAG...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAATGGAACAGGGCCTCGTaGCTCCAGTACAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: EGADDRAEAVEVPCRAGEWNRAS*LQYRDR
Trigger: CCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCA...TTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGGGTTCTCACCACCCTTaGGCCACGCCGTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGGSHHP*ATPSSP
Trigger: TGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACC...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 4 (lower is better)
Translates to: ASRLAVRMTVWPQKPRASAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...GGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGACTGACCAGGGGCTGTaGGGGGATCCCAGAGCAACC +
Preference number: 4 (lower is better)
Translates to: AGQGKEEVLFELLVSRALTDQGL*GDPRAT
Trigger: GGTTGCTCTGGGATCCCCCCACAGCCCCTGGTCAGT...CAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp CAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QVAAPLAVKDLAKGLRELGPHPA*WGLILA
Trigger: GGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCC...GAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588198.5
CDS-3UTR TCA 90 bp CACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCCTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: HQRLSRACSCSSASPGTCLAVGQ*GLGSRA
Trigger: TGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAG...GCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR TCA 90 bp CCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCCTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: PAHHWCRPHQRLSRACSCLAVGQ*GLGSRA
Trigger: TGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAG...GCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR TCA 90 bp GAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAGCTTGGTTGGCAGTCAGGATaGCCGTGTGGCCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: EACAVALQLPGPIGRGQLGWQSG*PCGHRS
Trigger: GCTTCTGTGGCCACACGGTCATCCTGACTGCCAACC...AAGCTGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR TCA 90 bp TGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGGTTGGCAGTCAGGATaGCCGTGTGGCCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: CPAGQGKEEVLFELLVSRGWQSG*PCGHRS
Trigger: GCTTCTGTGGCCACACGGTCATCCTGACTGCCAACC...CCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp TCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCTGGGTTGGCAGTCAGGATaGCCGTGTGGCCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SQPRWLSKIWPRASESSLGWQSG*PCGHRS
Trigger: GCTTCTGTGGCCACACGGTCATCCTGACTGCCAACC...CAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR TCA 90 bp GTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAGCCGCATCATCCACACTCATGGTaGCATTGCTGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VEDLHAALVGGAPIGQPHHPHSW*HCCPAP
Trigger: AGGAGCCGGGCAGCAATGTCACCATGAGTGTGGATG...ATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR TCA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCCGTGCGGAAGCCGTTaGAGTGCCCTGCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HLETGEVVGELLVDPSGSPCGSR*SALPGR
Trigger: CCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGG...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCCCGTGCGGAAGCCGTTaGAGTGCCCTGCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVPCGSR*SALPGR
Trigger: CCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGG...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCATGCCGTGCGGAAGCCGTTaGAGTGCCCTGCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: REHHGEADLLHQALHLLMPCGSR*SALPGR
Trigger: CCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGG...CATGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAATGACCTCAGACCAGTaGCAAGGGCAGACTGACCAG +
Preference number: 4 (lower is better)
Translates to: GADDRAEAVEVPCRAGEGMTSDQ*QGQTDQ
Trigger: CTGGTCAGTCTGCCCTTGTCACTGGTCTGAGGTCAT...TCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACGCCTGAACCCAGGTaGGCCCCCGGGAACCTCCAA +
Preference number: 4 (lower is better)
Translates to: RPHQRLSRACSCSSASPGTPEPR*APGNLQ
Trigger: TTGGAGGTTCCCGGGGGCTCACCTGGGTTCAGGCGT...CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588990.5
CDS-3UTR GCA 90 bp CCAGGGTGTGGGTGCTCCTGGTTTCTAAGAAGGGGCGGGAGGGAAGTGGGCTGCATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGCGCSWFLRRGGREVGCMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...GCAGCCCACTTCCCTCCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR GCA 90 bp CAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCAGGCCTCGGTTCCCGTaGACTGGACCTCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: QVAAPLAVKDLAKGLRELRPRFP*TGPHPA
Trigger: TGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT...GAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588198.5
CDS-3UTR GCA 90 bp GAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCAGGCCTCGGTTCCCGTaGACTGGACCTCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: EVRPRSPLVQTTPASLSCRPRFP*TGPHPA
Trigger: TGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp ACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACGCCAGCCCAGGGACTTaGAGTCGGCCAGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TTPASLSCLQLLFSQPRDASPGT*SRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGC...GTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp GTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCGCCAGCCCAGGGACTTaGAGTCGGCCAGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VQTTPASLSCLQLLFSQPASPGT*SRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGC...GGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp GTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VRPRSPLVQTTPASLSCLSRACS*SSASPG
Trigger: CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGA...CAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp TGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: CSEGVLGFSGSHHPWATPRLSRA*SCSSAS
Trigger: GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACG...CGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCCCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GEEDGKEACAVALQLPGPPASLS*LQLLFS
Trigger: GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGG...GGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000588198.5
CDS-3UTR GCA 90 bp GTTGGTGGCGCCCCCATCGGCCAGCCGCATGTCACCATCGTTCACGCCTGGTGCCCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VGGAPIGQPHVTIVHAWCPASLS*LQLLFS
Trigger: GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGG...GCACCAGGCGTGAACGATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR GCA 90 bp GAGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGCCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EPPDLVRPRTGSSSEEQEPASLS*LQLLFS
Trigger: GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGG...CTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAGGTCCAGGGTGTGGGTaGTCCTGGTTTCATTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLCRRSPRGPGWWRPHRPGPGCG*SWFHWC
Trigger: GCACCAATGAAACCAGGAGCACCCACACCCTGGACC...TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR GCA 90 bp GACACTGGGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAAAGGGCGTCCTCGCCCTaGACATTCACGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: DTGPGLGLRQGLEVPGQERASSP*TFTLMD
Trigger: GTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCT...TTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
CDS-3UTR GCA 90 bp GGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGAGGGCGTCCTCGCCCTaGACATTCACGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: GSFHRAWASRLAVRMTVWRASSP*TFTLMD
Trigger: GTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCT...CCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR GCA 90 bp CCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTGGCCAGGCCTCGGCCTaGGTCAAGGCCTCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PGQGARPRSRRSRSSSSSGQASA*VKASKF
Trigger: GAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC...AGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTGGATGGCGGAAGCCGTTGAAGTaGCCTGCCGGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QGARPRSRRSRSSSSSGWRKPLK*PAGQGK
Trigger: CTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCG...CCATCCAGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAATCGAGGGCGTCCTGGTaGTTACCACCTGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: EGADDRAEAVEVPCRAGESRASW*LPPGNW
Trigger: CCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGA...TTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCCCGCTCACCATTGGTaGAGACCACACCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: EVRPRSPLVQTTPASLSCPAHHW*RPHQRL
Trigger: GAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGG...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp ACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TTPASLSCLQLLFSQPRDAATAV*SLLASS
Trigger: GCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGC...GTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587310.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp CAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAGGTCATGGCCGTGCCTaGATGCCCAGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QRGLRSSPAAAWPHRQRPGHGRA*MPRSWL
Trigger: CAGCCAGGATCTGGGCATCCAGGCACGGCCATGACC...TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp AAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGGGTCATGGCCGTGCCTaGATGCCCAGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KPLKCPAGQGKEEVLFELGHGRA*MPRSWL
Trigger: CAGCCAGGATCTGGGCATCCAGGCACGGCCATGACC...CAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCAGGGTGTGGGTGCTCCTGGTTTCTAAGAAGGGGCGGGAGGGAAGTGGGCTGCGGTCATGGCCGTGCCTaGATGCCCAGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGCGCSWFLRRGGREVGCGHGRA*MPRSWL
Trigger: CAGCCAGGATCTGGGCATCCAGGCACGGCCATGACC...GCAGCCCACTTCCCTCCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CCA 90 bp TGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: WCRPHQRLSRACSCSSASASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp ACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAACCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: TTWKLVRWWENSWWTLVEPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...TTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: PEQPRGRPGAYHLETGEVISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...CACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCTAAGAAGGGGCGGGAGGGAAATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: WRGPGCGCSWFLRRGGREISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...TTCCCTCCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGGACCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CCA 90 bp CACTGGACCTCATCCAGCATGATGGGGCCTGATCCTTGCCCGAAGGCAGCTCTGATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: HWTSSSMMGPDPCPKAALISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...CAGAGCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp ACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: TPASLSCLQLLFSQPRDLISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...CAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp CTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: LQVGSQDDRVATEAQGVLPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...GAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DGKEACAVALQLPGPIGRALPRA*VAFSKP
Trigger: GGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGC...TCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AGQGKEEVLFELLVSRALRSQPR*LSKIWP
Trigger: TGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCT...CAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp CTGGAACGAGGGGTCCTGGGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LERGVLGEEDGKEACAVASFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...GGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp CAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTGGATGGAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QGARPRSRRSRSSSSSGWSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...CCATCCAGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp ACAGAAGCCCAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCAAGGTCCAGGGGCATCTaGAACGAGGGGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TEAQGVLALHIHADGQVARSRGI*NEGSWG
Trigger: CCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCT...TGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp CTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGCAGGGCGTCCCCTGTaGCCACTGCATAGGCATACA +
Preference number: 4 (lower is better)
Translates to: LGLQVGSQDDRVATEAQGAGRPL*PLHRHT
Trigger: TGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGC...GCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp TGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGCAAAGGCACTCCAGGTaGGCGAGGTGTAAATCCGGG +
Preference number: 4 (lower is better)
Translates to: CSEGVLGFSGSHHPWATPQRHSR*ARCKSG
Trigger: CCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTG...CGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAACTGTAGGTCCAGCAGCTCTGGATaGTGGGGAGGTAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: GQASACVKASKFQARNCRSSSSG*WGGRPG
Trigger: CCCTGGTCTACCTCCCCACCATCCAGAGCTGCTGGA...CCTACAGTTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp CTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCTGGTGTCCAGGGCACTaGGAATCGCAGCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGLQVGSQDDRVATEAQGWCPGH*ESQPSS
Trigger: GCTGGAAGGCTGCGATTCCCAGTGCCCTGGACACCA...GCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp CTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGGCCCCCGCTCACCATTaGTGCAGACCACACCAGCGT +
Preference number: 4 (lower is better)
Translates to: LQLLFSQPRDLQSASEASAPAHH*CRPHQR
Trigger: ACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGC...CGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp CAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCGGGTGTGGGTGCTCCTaGTTTCTAAGAAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QVAAPLAVKDLAKGLRELGCGCS*FLRRGG
Trigger: CCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCC...GAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR TCA 90 bp CACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCCAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HQRLSRACSCSSASPGTCQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...GCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR TCA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGCTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRLAVGQ*GLGSRA
Trigger: TGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAG...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000591778.5
CDS-3UTR TCA 90 bp CCAGGGTGTGGGTGCTCCTGGTTTCTAAGAAGGGGCGGGAGGGAAGTGGGCTGCGGTTGGCAGTCAGGATaGCCGTGTGGCCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: PGCGCSWFLRRGGREVGCGWQSG*PCGHRS
Trigger: GCTTCTGTGGCCACACGGTCATCCTGACTGCCAACC...GCAGCCCACTTCCCTCCCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR TCA 90 bp CGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGCATCCACACTCATGGTaGCATTGCTGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RAGEGGGALRAVGVQGTGHPHSW*HCCPAP
Trigger: AGGAGCCGGGCAGCAATGTCACCATGAGTGTGGATG...CCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp AAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAGCCGCATGTCAGGCAGAATATCTCCTTaGAGCTCTGAGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KISTRPWLVAPPSASRMSGRISP*SSEQPQ
Trigger: CTGGGGCTGCTCAGAGCTTCAAGGAGATATTCTGCC...TGACATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR GCA 90 bp CAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGTGCCCAGATCCTGGCTaGGGTAGCTGCAACGGCCGT +
Preference number: 4 (lower is better)
Translates to: QTTPASLSCLQLLFSQPRCPDPG*GSCNGR
Trigger: ACGGCCGTTGCAGCTACCGCAGCCAGGATCTGGGCA...CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587310.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp GGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGGCCAGCCCAGGGACTTaGAGTCGGCCAGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GVLVLTTWKLVRWWENSWASPGT*SRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGC...CCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000591778.5
CDS-3UTR GCA 90 bp TGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCGCCAGCCCAGGGACTTaGAGTCGGCCAGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: WCRPHQRLSRACSCSSASASPGT*SRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGC...GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp CAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QVAAPLAVKDLAKGLRELRLSRA*SCSSAS
Trigger: GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACG...GAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR GCA 90 bp GGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAPPLTIGADHTSVSLVPRLSRA*SCSSAS
Trigger: GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACG...AGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp CGATCTGAGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGGATGGCAAAGAGGCTTaGGCAGTAGCCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSEPPDLVRPRTGSSSEEDGKEA*AVALQL
Trigger: CAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC...CTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCGATGGCAAAGAGGCTTaGGCAGTAGCCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DRSQPRWLSKIWPRASESDGKEA*AVALQL
Trigger: CAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC...GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000588198.5
CDS-3UTR GCA 90 bp AGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGGCCAGGCCTCGGCCTaGGTCAAGGCCTCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SNLEGVLVLTTWKLVRWWGQASA*VKASKF
Trigger: GAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC...CCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CAGCTCCAGGTGTCCACGGCCTTCAGTAGGGCCAGCTCGCTGGGCACCGCCAGGTTTCGTAGGCAATGGTaGGATCTGAGCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: QLQVSTAFSRASSLGTARFRRQW*DLSRQT
Trigger: AGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAA...CCTGGCGGTGCCCAGCGAGCTGGCCCTACTGAAGGCCGTGGACACCTGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGGCCGTTGAAGTGCCCTaGCGGGCAGGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLPALEIGDVCHEEPFAEAVEVP*RAGEGG
Trigger: TCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGC...CTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGAATCGCGGAAGCCGTTGAAGTaGCCTGCCGGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RGRRRCSSSCWCPGHWESRKPLK*PAGQGK
Trigger: CTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCG...CGATTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAACTGTAGGTCGAGGGCGTCCTGGTaGTTACCACCTGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: GQASACVKASKFQARNCRSRASW*LPPGNW
Trigger: CCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGA...CCTACAGTTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTGATCCCTCTGCAGACTaGTCCTTTGACCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: DRAEAVEVPCRAGEGGGADPSAD*SFDPEA
Trigger: GGCTTCTGGGTCAAAGGACCAGTCTGCAGAGGGATC...AGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCGGTCATGGCCGTGCCTaGATGCCCAGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PAHHWCRPHQRLSRACSCGHGRA*MPRSWL
Trigger: CAGCCAGGATCTGGGCATCCAGGCACGGCCATGACC...GCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp TGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: WVLLVSLVQTTPASLSCLASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...CAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CCA 90 bp AGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGCTGCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: RSLTMGTHSASTLMVTLLPRGPG*WRPHRP
Trigger: TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGG...CAGCAATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp TGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: WVLLVSLVQTTPASLSCLISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...CAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CCA 90 bp TGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WCRPHQRLSRACSCSSASCPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp AGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SNLEGVLVLTTWKLVRWWSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...CCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QPRGRPGAYHLETGEVVGSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...TCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCACCTGGGGGAGGAGGATaGCAAAGAGGCTTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: QRGLRSSPAAAWPHRQRPPGGGG*QRGLRS
Trigger: ACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGG...TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGAGGTCCAGGGGCATCTaGAACGAGGGGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRRSRGI*NEGSWG
Trigger: CCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCT...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAAGGTCCAGGGGCATCTaGAACGAGGGGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QPRGRPGAYHLETGEVVGRSRGI*NEGSWG
Trigger: CCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCT...TCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCAGGGCGTCCCCTGTaGCCACTGCATAGGCATACA +
Preference number: 4 (lower is better)
Translates to: EAQDRELVRGAGEAVVPAAGRPL*PLHRHT
Trigger: TGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGC...TGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACACCGCAGGGCGTCCCCTGTaGCCACTGCATAGGCATACA +
Preference number: 4 (lower is better)
Translates to: SWGSPVLTTLGPRRLVHTAGRPL*PLHRHT
Trigger: TGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGC...GGTGTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GCCCGGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGACACCCTCTTGTCCTaGAAGAGGAAGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: ARLLPQGLGLQVGSQDDRDTLLS*KRKLGC
Trigger: ACACCCCAGCTTCCTCTTCCAGGACAAGAGGGTGTC...ACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCTGGTGTCCAGGGCACTaGGAATCGCAGCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EVPCRAGEGGGALRAVGVWCPGH*ESQPSS
Trigger: GCTGGAAGGCTGCGATTCCCAGTGCCCTGGACACCA...GACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTGGTGTCCAGGGCACTaGGAATCGCAGCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KPLKCPAGQGKEEVLFELWCPGH*ESQPSS
Trigger: GCTGGAAGGCTGCGATTCCCAGTGCCCTGGACACCA...CAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGTGGGAGAACTCCTGGTaGACCCTAGTGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGWENSW*TLVEAF
Trigger: GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCA...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGAAACTGGTGAGGTGGTaGGAGAACTCCTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGKLVRW*ENSWWT
Trigger: GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTT...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: EGVLGFSGSHHPWATPSSTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...ACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: CPAGQGKEEVLFELLVSRTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...CCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAAGTCATCATCACTaGGGATACCTGGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HWGLRREVRPRSPLVQTTPSHHH*GYLVLG
Trigger: CCCAAGCACCAGGTATCCCCAGTGATGATGACTTGG...TGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588990.5
CDS-3UTR CCA 90 bp CAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGGTTGCCCCCGCTCACCATTaGTGCAGACCACACCAGCGT +
Preference number: 4 (lower is better)
Translates to: QLLFSQPRDLQSASEASVAPAHH*CRPHQR
Trigger: ACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGC...AACCGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp CCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCGCAGGAGAGAAGATCTaGCTAACCGCTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PAHHWCRPHQRLSRACSCAGEKI*LTAGPR
Trigger: CCGGGGCCCAGCGGTTAGCCAGATCTTCTCTCCTGC...GCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588899.1
CDS-3UTR TCA 90 bp GAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGCAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ERSRVWVLLVSLVQTTPAQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...CGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR TCA 90 bp TGGCCACTGCATAGGCATACAGGTCCAGGGGCATCTGGAACGAGGGGTCCTGGGGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: WPLHRHTGPGASGTRGPGGPHPA*WGLILA
Trigger: GGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCC...CCCAGGACCCCTCGTTCCAGATGCCCCTGGACCTGTATGCCTATGCAGTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR TCA 90 bp CAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGGTTGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QLLFSQPRDLQSASEASVGPHPA*WGLILA
Trigger: GGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCC...AACCGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR TCA 90 bp ACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TTPASLSCLQLLFSQPRDGPHPA*WGLILA
Trigger: GGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCC...GTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR TCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCCTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVLAVGQ*GLGSRA
Trigger: TGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAG...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000591778.5
CDS-3UTR TCA 90 bp GGTGTTGTGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCCGTGCGGAAGCCGTTaGAGTGCCCTGCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GVVESGRTGRGSICSQRGPCGSR*SALPGR
Trigger: CCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGG...CCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCACAACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTACCATCGTTCACGCCTaGACCCAGGTGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: RGPGCGCSWFHWCRPHQRTIVHA*TQVSPR
Trigger: CCGGGGGCTCACCTGGGTTCAGGCGTGAACGATGGT...ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR GCA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVREGSWP*LDAQIL
Trigger: CAGGATCTGGGCATCCAGGCACGGCCATGACCCCTC...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp TGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: WCRPHQRLSRACSCSSASEGSWP*LDAQIL
Trigger: CAGGATCTGGGCATCCAGGCACGGCCATGACCCCTC...GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587310.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp CACTGGACCTCATCCAGCATGATGGGGCCTGATCCTTGCCCGAAGGCAGCTCTGATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HWTSSSMMGPDPCPKAALMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...CAGAGCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp CAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGGTTAGGCCTCGGTTCCCGTaGACTGGACCTCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: QLLFSQPRDLQSASEASVRPRFP*TGPHPA
Trigger: TGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT...AACCGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp ACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TTPASLSCLQLLFSQPRDSRACS*SSASPG
Trigger: CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGA...GTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp CTGGAACGAGGGGTCCTGGGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LERGVLGEEDGKEACAVARLSRA*SCSSAS
Trigger: GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACG...GGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000588198.5
CDS-3UTR GCA 90 bp CAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QRGLRSSPAAAWPHRQRPPASLS*LQLLFS
Trigger: GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGG...TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000588198.5
CDS-3UTR GCA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGTCCTGGTTTCATTGGTaGAGACCACACCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGSWFHW*RPHQRL
Trigger: GAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGA...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000587251.5
CDS-3UTR GCA 90 bp AGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCATGGGAGGGCCAGGCCTCGGCCTaGGTCAAGGCCTCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SIMGKRIFSTKPSTSSWEGQASA*VKASKF
Trigger: GAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC...CTCCCATGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGGGCCAGGCCTCGGCCTaGGTCAAGGCCTCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWGQASA*VKASKF
Trigger: GAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGGAAATCGGTGACGTCTaGCACGAAGAGCCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: RAGEGGGALRAVGVQGTGEIGDV*HEEPFA
Trigger: TGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC...CCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp TGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGAGGGGAAGGAGGAGGTaGTCTTCGAGCTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CPAGQGKEEVLFELLVSRRGRRR*SSSCWC
Trigger: ACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCT...CCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp TCCGTGCACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTCGGAAGCCGTTGAAGTaGCCTGCCGGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVHSRNCLSQRHSRWARCRKPLK*PAGQGK
Trigger: CTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCG...ACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTGCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVLTTWKLVRWWENSWWTAATAV*SLLASS
Trigger: GCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGC...GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VWVLLVSLVQTTPASLSCAATAV*SLLASS
Trigger: GCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGC...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR CCA 90 bp GAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGGGTCATGGCCGTGCCTaGATGCCCAGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ERSRVWVLLVSLVQTTPAGHGRA*MPRSWL
Trigger: CAGCCAGGATCTGGGCATCCAGGCACGGCCATGACC...CGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR CCA 90 bp GCCCCCGTCTGGACTGATAGACCAGTTGTGACTTCCGTGCACTCCAGGAACTGTGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: APVWTDRPVVTSVHSRNCASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...ACAGTTCCTGGAGTGCACGGAAGTCACAACTGGTCTATCAGTCCAGACGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACACCCCATCGTTCACGCCTTaGGTTCCTGCAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SWGSPVLTTLGPRRLVHTPSFTP*VPATSS
Trigger: GCTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGG...GGTGTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: DRLNCSSKSSSGSIMGKRISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...CCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp ACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCAGTAATCTCCACGCGGCCCTaGTTGGTGGCGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: TGEVVGELLVDPSGSLPVISTRP*LVAPPS
Trigger: CGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGAT...TACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: WCRPHQRLSRACSCSSASPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp TTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LVQTTPASLSCLQLLFSQCPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...CTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp TGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WVLLVSLVQTTPASLSCLALPRA*VAFSKP
Trigger: GGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGC...CAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CCA 90 bp GACACTGGGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAAGCAGAGGCCAGCTTGTaGAAGCACTTGACTGACGAC +
Preference number: 4 (lower is better)
Translates to: DTGPGLGLRQGLEVPGQEAEASL*KHLTDD
Trigger: GTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC...TTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGCAGAGGCCAGCTTGTaGAAGCACTTGACTGACGAC +
Preference number: 4 (lower is better)
Translates to: AGQGKEEVLFELLVSRALAEASL*KHLTDD
Trigger: GTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC...CAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCGTTGGAGCAGGTCTGTaGGGACACTGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RASNWKGTVWNSRACRVFVGAGL*GHWARP
Trigger: AGGCCTGGCCCAGTGTCCCCACAGACCTGCTCCAAC...GAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTCTGGGCAGCAGCAGTTaGAGCAGGTCTGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: PGQGARPRSRRSRSSSSSLGSSS*SRSVGT
Trigger: TGTCCCCACAGACCTGCTCCAACTGCTGCTGCCCAG...AGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAATGTTTTCGTAGGCAATaGTGCGATCTGAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: EGADDRAEAVEVPCRAGECFRRQ*CDLSRQ
Trigger: CTGGCGGCTCAGATCGCACCATTGCCTACGAAAACA...TTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGTGCTCTTCGAGCTGTTaGTGTCCAGGGCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: GSFHRAWASRLAVRMTVWCSSSC*CPGHWE
Trigger: TTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCA...CCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 4 (lower is better)
Translates to: EQPRGRPGAYHLETGEVVAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...CACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 4 (lower is better)
Translates to: QPRGRPGAYHLETGEVVGAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...TCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAACTGTAGGAAACTGGTGAGGTGGTaGGAGAACTCCTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: GQASACVKASKFQARNCRKLVRW*ENSWWT
Trigger: GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTT...CCTACAGTTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp CAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCTGGAAACTGGTGAGGTaGTGGGAGAACTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QVAAPLAVKDLAKGLRELWKLVR*WENSWW
Trigger: CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA...GAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS-3UTR CCA 90 bp CGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGTGGAAACTGGTGAGGTaGTGGGAGAACTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RAGEGGGALRAVGVQGTGWKLVR*WENSWW
Trigger: CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA...CCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCTCGGGGATACCTGGTGCTTaGGTTCCTGCAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQLLFSQPRDLQSASEASGIPGA*VPATSS
Trigger: GCTGCTGGTTGCAGGAACCCAAGCACCAGGTATCCC...CGAGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588990.5
CDS-3UTR CCA 90 bp GGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAATCACTGGGGATACCTaGTGCTTGGGTTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GLCRRSPRGPGWWRPHRPITGDT*CLGSCN
Trigger: GTTGCAGGAACCCAAGCACCAGGTATCCCCAGTGAT...TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588990.5
CDS-3UTR CCA 90 bp CTGGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCACCATCGTTCACGCCTaGTGCTTCAAGCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LASVEDLHAALVGGAPIGTIVHA*CFKQER
Trigger: TCTCTCCTGCTTGAAGCACCAGGCGTGAACGATGGT...GCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR TCA 90 bp AGCTCCCTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCTAAGAAGGGGCGGTGCAGACTGGTCCTTTaGCCCAGAAGCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSLERSRVWVLLVSKKGRCRLVL*PRSLSQ
Trigger: CTGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCA...CCGCCCCTTCTTAGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR TCA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGCAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000591778.5
CDS-3UTR TCA 90 bp CTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCACAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LERSRVWVLLVSLVQTTPQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...TGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR TCA 90 bp CTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LVLTTWKLVRWWENSWWTPAHSR*WTGRSP
Trigger: GGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGG...GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp TCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCACCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGSIMGKRIFSTKPSTSSPAHSR*WTGRSP
Trigger: GGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGG...TGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAAGGTTGGCAGTCAGGATaGCCGTGTGGCCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRGRPGAYHLETGEVVGEGWQSG*PCGHRS
Trigger: GCTTCTGTGGCCACACGGTCATCCTGACTGCCAACC...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp ACAGAAGCCCAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCACATCCACACTCATGGTaGCATTGCTGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TEAQGVLALHIHADGQVAHPHSW*HCCPAP
Trigger: AGGAGCCGGGCAGCAATGTCACCATGAGTGTGGATG...TGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR TCA 90 bp GGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: GSFHRAWASRLAVRMTVWCRYPR*GSGLCT
Trigger: GGTACAAAGGCCTGAACCTCACCGAGGATACCTACA...CCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp CGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCGGCAATGGTGCGATCTaGGCCGCCAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RASNWKGTVWNSRACRVFGNGAI*AARLGE
Trigger: CTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCC...GAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCATGGGAGGCACGCTCCCTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GKRIFSTKPSTSSWEARSLVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...GGAGCGTGCCTCCCATGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp CTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTACCATCGTTCACGCCTaGACCCAGGTGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LTIGADHTSVSLVPAVALTIVHA*TQVSPR
Trigger: CCGGGGGCTCACCTGGGTTCAGGCGTGAACGATGGT...AAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588990.5
CDS-3UTR GCA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWEGSWP*LDAQIL
Trigger: CAGGATCTGGGCATCCAGGCACGGCCATGACCCCTC...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000591778.5
CDS-3UTR GCA 90 bp AGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RGPGCGCSWFHWCRPHQRMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR GCA 90 bp CACTGGACCTCATCCAGCATGATGGGGCCTGATCCTTGCCCGAAGGCAGCTCTGAGGCCTCGGTTCCCGTaGACTGGACCTCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: HWTSSSMMGPDPCPKAALRPRFP*TGPHPA
Trigger: TGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT...CAGAGCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp GGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GVLVLTTWKLVRWWENSWSRACS*SSASPG
Trigger: CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGA...CCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCCCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PAHHWCRPHQRLSRACSCPASLS*LQLLFS
Trigger: GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGG...GCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp AGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGATGGCAAAGAGGCTTaGGCAGTAGCCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RLGEAQDRELVRGAGEAVDGKEA*AVALQL
Trigger: CAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC...TACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGAAATCGGTGACGTCTaGCACGAAGAGCCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: LQVGSQDDRVATEAQGVLEIGDV*HEEPFA
Trigger: TGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC...GAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR GCA 90 bp GGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCATGGGAGGCACGCTCCAGGGGAAGGAGGAGGTaGTCTTCGAGCTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GKRIFSTKPSTSSWEARSRGRRR*SSSCWC
Trigger: ACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCT...GGAGCGTGCCTCCCATGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCGCCGTTGAAGTGCCCTaGCGGGCAGGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFAVEVP*RAGEGG
Trigger: TCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGC...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCACAGCAGGCCCTACCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAQQALP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGTAGGGCCTGCTG...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS-3UTR CCA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: YHLETGEVVGELLVDPSGAATAV*SLLASS
Trigger: GCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGC...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HHWCRPHQRLSRACSCSSAATAV*SLLASS
Trigger: GCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGC...TGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGGCCACTGCATAGGCATACAGGTCCAGGGGCATCTGGAACGAGGGGTCCTGGGCCATCGTTCACGCCTTaGGTTCCTGCAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WPLHRHTGPGASGTRGPGPSFTP*VPATSS
Trigger: GCTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGG...CCCAGGACCCCTCGTTCCAGATGCCCCTGGACCTGTATGCCTATGCAGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp AGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: RGPGCGCSWFHWCRPHQRPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CCA 90 bp GTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: VGAPGFIGADHTSVSLVPPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...AGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CCA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCTGCCCAGAGCCTGGGTaGCGTTCTCGAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFCPEPG*RSRSPG
Trigger: CCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCA...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR CCA 90 bp ACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCAGTAGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TGEVVGELLVDPSGSLPVALPRA*VAFSKP
Trigger: GGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGC...TACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGCCTGCTCCTGGTTTCATTaGTGCAGACCACACCAGCGT +
Preference number: 4 (lower is better)
Translates to: QVGSQDDRVATEAQGVLACSWFH*CRPHQR
Trigger: ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCA...GGCGAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587310.5
CDS-3UTR CCA 90 bp CAGAAGCCCAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCAGGGGTGTGGGTGCTCCTaGTTTCATTGGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: QKPRASSPCTFTLMDRSQGCGCS*FHWCRP
Trigger: TGGTCTGCACCAATGAAACCAGGAGCACCCACACCC...CTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587310.5
CDS-3UTR CCA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCGTCAGGATGACCGTGTaGCCACAGAAGCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HLETGEVVGELLVDPSGSVRMTV*PQKPRA
Trigger: CGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: HLETGEVVGELLVDPSGSSFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGCTGGGCAGCAGCAGTTaGAGCAGGTCTGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: EQPRGRPGAYHLETGEVVLGSSS*SRSVGT
Trigger: TGTCCCCACAGACCTGCTCCAACTGCTGCTGCCCAG...CACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGTGGAACAGGGCCTCGTaGCTCCAGTACAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SLPALEIGDVCHEEPFAEWNRAS*LQYRDR
Trigger: CCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCA...CTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCTGCAGAGTCTTCTTCTaGAACAGGGCCTCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LQVGSQDDRVATEAQGVLCRVFF*NRASWL
Trigger: GAGCCACGAGGCCCTGTTCCAGAAGAAGACTCTGCA...GAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp CTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCTGTTTTCGTAGGCAATaGTGCGATCTGAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LGLQVGSQDDRVATEAQGCFRRQ*CDLSRQ
Trigger: CTGGCGGCTCAGATCGCACCATTGCCTACGAAAACA...GCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 4 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCGGGCTCAGCTCACCTTaGGTTCCTGCAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WCRPHQRLSRACSCSSASGLSSP*VPATSS
Trigger: GCTGCTGGTTGCAGGAACCCAAGGTGAGCTGAGCCC...GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR CCA 90 bp TTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGGCAGGAGAGAAGATCTaGCTAACCGCTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LVQTTPASLSCLQLLFSQAGEKI*LTAGPR
Trigger: CCGGGGCCCAGCGGTTAGCCAGATCTTCTCTCCTGC...CTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR TCA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAATGCAGACTGGTCCTTTaGCCCAGAAGCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRGRPGAYHLETGEVVGECRLVL*PRSLSQ
Trigger: CTGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCA...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp CCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PLVQTTPASLSCLQLLFSGPHPA*WGLILA
Trigger: GGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCC...GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR TCA 90 bp GTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: VRKPLKCPAGQGKEEVLFVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...GAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp ACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCAGTATGCCCAGATCCTGGCTaGGGTAGCTGCAACGGCCGT +
Preference number: 4 (lower is better)
Translates to: TGEVVGELLVDPSGSLPVCPDPG*GSCNGR
Trigger: ACGGCCGTTGCAGCTACCGCAGCCAGGATCTGGGCA...TACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTGAGGTTCAGGCCTTTTGCCCAGATCCTGGCTaGGGTAGCTGCAACGGCCGT +
Preference number: 4 (lower is better)
Translates to: GRGVNPGLVGILGEVQAFCPDPG*GSCNGR
Trigger: ACGGCCGTTGCAGCTACCGCAGCCAGGATCTGGGCA...AAAGGCCTGAACCTCACCGAGGATACCTACAAGCCCCGGATTTACACCTCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAATGGGGCCTGATCCTTaGCCGAAGGCAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: YHLETGEVVGELLVDPSGMGPDP*PKAALP
Trigger: GGGCAGAGCTGCCTTCGGGCAAGGATCAGGCCCCAT...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000591778.5
CDS-3UTR GCA 90 bp TTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGAGGCCTCGGTTCCCGTaGACTGGACCTCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVQTTPASLSCLQLLFSQRPRFP*TGPHPA
Trigger: TGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT...CTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HLETGEVVGELLVDPSGSSRACS*SSASPG
Trigger: CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGA...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR GCA 90 bp TGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WCRPHQRLSRACSCSSASRLSRA*SCSSAS
Trigger: GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACG...GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp CAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGACGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QPRGRPGAYHLETGEVVGRLSRA*SCSSAS
Trigger: GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACG...TCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGCCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ERSRVWVLLVSLVQTTPAPASLS*LQLLFS
Trigger: GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGG...CGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR GCA 90 bp GGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGGGTCCAGGGTGTGGGTaGTCCTGGTTTCATTGGTGC +
Preference number: 4 (lower is better)
Translates to: GVLVLTTWKLVRWWENSWGPGCG*SWFHWC
Trigger: GCACCAATGAAACCAGGAGCACCCACACCCTGGACC...CCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000587251.5
CDS-3UTR GCA 90 bp CACTGGACCTCATCCAGCATGATGGGGCCTGATCCTTGCCCGAAGGCAGCTCTGGGTCCAGGGTGTGGGTaGTCCTGGTTTCATTGGTGC +
Preference number: 4 (lower is better)
Translates to: HWTSSSMMGPDPCPKAALGPGCG*SWFHWC
Trigger: GCACCAATGAAACCAGGAGCACCCACACCCTGGACC...CAGAGCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR GCA 90 bp GGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGGGCGTCCTCGCCCTaGACATTCACGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: GAYHLETGEVVGELLVDPRASSP*TFTLMD
Trigger: GTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCT...AGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
CDS-3UTR GCA 90 bp GGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGGTCCCCTGTGGCCACTaGATAGGCATACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GVLVLTTWKLVRWWENSWVPCGH*IGIQVQ
Trigger: CTGGACCTGTATGCCTATGCAGTGGCCACAGGGGAC...CCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGGCACTGGGAATCGGTCCCCTGTGGCCACTaGATAGGCATACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGRRRCSSSCWCPGHWESVPCGH*IGIQVQ
Trigger: CTGGACCTGTATGCCTATGCAGTGGCCACAGGGGAC...CGATTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp TGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGTCCAGGTGGAATTCCAGGGCCTaGAGAGTCTTCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CPAGQGKEEVLFELLVSRWNSRA*RVFFWN
Trigger: GTTCCAGAAGAAGACTCTGCAGGCCCTGGAATTCCA...CCTGGACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGAAATCGGTGACGTCTaGCACGAAGAGCCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: RLGEAQDRELVRGAGEAVEIGDV*HEEPFA
Trigger: TGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC...TACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GCCCTTCGCAGAGCATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTGAGCGCCGTTGAAGTGCCCTaGCGGGCAGGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ALRRASGLCFRRQWCDLSAVEVP*RAGEGG
Trigger: TCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGC...GCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATGCTCTGCGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGCGGAAGCCGTTGAAGTaGCCTGCCGGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLRKPLK*PAGQGK
Trigger: CTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCG...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GTTGGTGGCGCCCCCATCGGCCAGCCGCATGTCACCATCGTTCACGCCTGGTGCAGCCTTCCACACTTCTaGTTTTGGTATTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VGGAPIGQPHVTIVHAWCSLPHF*FWYFPG
Trigger: CCCTGGGAAATACCAAAAGCAGAAGTGTGGAAGGCT...GCACCAGGCGTGAACGATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR GCA 90 bp TGGCCACTGCATAGGCATACAGGTCCAGGGGCATCTGGAACGAGGGGTCCTGGGGGTCCAGGGTGTGGGTaGTCCTGGTTTCTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WPLHRHTGPGASGTRGPGGPGCG*SWFLRR
Trigger: CCTTCTTAGAAACCAGGAGCACCCACACCCTGGACC...CCCAGGACCCCTCGTTCCAGATGCCCCTGGACCTGTATGCCTATGCAGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CCA 90 bp GGGTGCTCCTGGTTTCTAAGAAGGGGCGGGAGGGAAGTGGGCTGCGTTAGGAGCGATCCCTCTGCAGACTaGTCCTTTGACCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GCSWFLRRGGREVGCVRSDPSAD*SFDPEA
Trigger: GGCTTCTGGGTCAAAGGACCAGTCTGCAGAGGGATC...GCTCCTAACGCAGCCCACTTCCCTCCCGCCCCTTCTTAGAAACCAGGAGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CCA 90 bp AGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGGATCCCTCTGCAGACTaGTCCTTTGACCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RPHQRLSRACSCSSASPGDPSAD*SFDPEA
Trigger: GGCTTCTGGGTCAAAGGACCAGTCTGCAGAGGGATC...CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588990.5
CDS-3UTR CCA 90 bp GAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EIGDVCHEEPFAEHQGFVAATAV*SLLASS
Trigger: GCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGC...AACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCGGTCATGGCCGTGCCTaGATGCCCAGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFGHGRA*MPRSWL
Trigger: CAGCCAGGATCTGGGCATCCAGGCACGGCCATGACC...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp ACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCAGTAGGTCATGGCCGTGCCTaGATGCCCAGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGEVVGELLVDPSGSLPVGHGRA*MPRSWL
Trigger: CAGCCAGGATCTGGGCATCCAGGCACGGCCATGACC...TACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTGGTCATGGCCGTGCCTaGATGCCCAGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LTIGADHTSVSLVPAVALGHGRA*MPRSWL
Trigger: CAGCCAGGATCTGGGCATCCAGGCACGGCCATGACC...AAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CCA 90 bp AGGAGCCGGGGCACTGCCACTCTCTGGGGTCAGTGTCTTCATCTGAAAGTGAGGAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSRGTATLWGQCLHLKVRRSQPR*LSKIWP
Trigger: TGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCT...CCTCACTTTCAGATGAAGACACTGACCCCAGAGAGTGGCAGTGCCCCGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CCA 90 bp GGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTGAGGTTCAGGCCTTTTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GRGVNPGLVGILGEVQAFSFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...AAAGGCCTGAACCTCACCGAGGATACCTACAAGCCCCGGATTTACACCTCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp TCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SLVQTTPASLSCLQLLFSSFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR CCA 90 bp ACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGAGCCCTGCAGCTGCCTaGCCCCATAGGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TPGTVCHKGTPGGRGVNPSPAAA*PHRQRP
Trigger: TGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCT...CGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCCTGGGGGAGGAGGATaGCAAAGAGGCTTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: HLETGEVVGELLVDPSGSPGGGG*QRGLRS
Trigger: ACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGG...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CTTCCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCCTGGGGGAGGAGGATaGCAAAGAGGCTTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LPALEIGDVCHEEPFAEHPGGGG*QRGLRS
Trigger: ACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGG...ATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGAGGTCCAGGGGCATCTaGAACGAGGGGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRRSRGI*NEGSWG
Trigger: CCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCT...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCGCAGGGCGTCCCCTGTaGCCACTGCATAGGCATACA +
Preference number: 4 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVAGRPL*PLHRHT
Trigger: TGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGC...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTTGGAACAGGGCCTCGTaGCTCCAGTACAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GPATGRAQCGIPGPAESSWNRAS*LQYRDR
Trigger: CCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCA...AGAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GTTGGTCAGGTAGAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCTGCAGAGTCTTCTTCTaGAACAGGGCCTCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VGQVEGADDRAEAVEVPCCRVFF*NRASWL
Trigger: GAGCCACGAGGCCCTGTTCCAGAAGAAGACTCTGCA...GCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTCTACCTGACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTATACCGGGCCAGCAACTaGAAGGGCACAGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RLGEAQDRELVRGAGEAVYRASN*KGTVWN
Trigger: ATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTA...TACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGCAAAGGCACTCCAGGTaGGCGAGGTGTAAATCCGGG +
Preference number: 4 (lower is better)
Translates to: PEQPRGRPGAYHLETGEVQRHSR*ARCKSG
Trigger: CCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTG...CACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGCAAAGGCACTCCAGGTaGGCGAGGTGTAAATCCGGG +
Preference number: 4 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRQRHSR*ARCKSG
Trigger: CCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTG...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTCCAAAGGCCCCCGTCTaGACTGATAGACCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: VEVPCRAGEGGGALRAVGPKAPV*TDRPVV
Trigger: CACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGG...ACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp ACAGAAGCCCAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCACCAAAGGCCCCCGTCTaGACTGATAGACCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: TEAQGVLALHIHADGQVAPKAPV*TDRPVV
Trigger: CACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGG...TGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCTCCAGCAGCTCTGGATaGTGGGGAGGTAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVSSSSG*WGGRPG
Trigger: CCCTGGTCTACCTCCCCACCATCCAGAGCTGCTGGA...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCCCACACCTGAGGAGTTaGTCAGGTAGAAGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: RASNWKGTVWNSRACRVFPHLRS*SGRRGG
Trigger: TCCGCCCCTTCTACCTGACCAACTCCTCAGGTGTGG...GAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGTGGTGGGAGAACTCCTaGTGGACCCTAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SNLEGVLVLTTWKLVRWWWWENS*WTLVEA
Trigger: GGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCA...CCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QPRGRPGAYHLETGEVVGTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...TCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp ACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAACTGACCAGGGGCTGTaGGGGGATCCCAGAGCAACC +
Preference number: 4 (lower is better)
Translates to: TTWKLVRWWENSWWTLVETDQGL*GDPRAT
Trigger: GGTTGCTCTGGGATCCCCCCACAGCCCCTGGTCAGT...TTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTGAGGTTCAGGCCTTTACTGACCAGGGGCTGTaGGGGGATCCCAGAGCAACC +
Preference number: 4 (lower is better)
Translates to: GRGVNPGLVGILGEVQAFTDQGL*GDPRAT
Trigger: GGTTGCTCTGGGATCCCCCCACAGCCCCTGGTCAGT...AAAGGCCTGAACCTCACCGAGGATACCTACAAGCCCCGGATTTACACCTCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCGGGATACCTGGTGCTTaGGTTCCTGCAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGEVQGVGAPGFIGADHTGIPGA*VPATSS
Trigger: GCTGCTGGTTGCAGGAACCCAAGCACCAGGTATCCC...GGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR CCA 90 bp GATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGATCTGGAAGGCTCCATTaGTGCAGACCACACCAGCGT +
Preference number: 4 (lower is better)
Translates to: DGKEACAVALQLPGPIGRSGRLH*CRPHQR
Trigger: ACGCTGGTGTGGTCTGCACCAATGGAGCCTTCCAGA...TCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CCA 90 bp GGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCAAAGTGAGGGATTTGTaGCTGCCTCATTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: GRSPAGCQRSGQGPPRAPKVRDL*LPHSLW
Trigger: CCAGAGTGAATGAGGCAGCCACAAATCCCTCACTTT...GGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR TCA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGTGCAGACTGGTCCTTTaGCCCAGAAGCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWCRLVL*PRSLSQ
Trigger: CTGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCA...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp AAGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGCTCTTGCAGTCGGCCAGTaGGGCCTCGGTTCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: KVPDHGHTLSIHTHGDIALAVGQ*GLGSRA
Trigger: TGCACGGGAACCGAGGCCTCACTGGCCGACTGCAAG...AGCAATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR TCA 90 bp CTGGAACGAGGGGTCCTGGGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: LERGVLGEEDGKEACAVAVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...GGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR TCA 90 bp GTTGGTCAGGTAGAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: VGQVEGADDRAEAVEVPCCRYPR*GSGLCT
Trigger: GGTACAAAGGCCTGAACCTCACCGAGGATACCTACA...GCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTCTACCTGACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCAATCAGAAGAATATTTaGCCAAAGGCCCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: ASRLAVRMTVWPQKPRASNQKNI*PKAPVW
Trigger: CCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATT...GGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp ACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGGCAATGGTGCGATCTaGGCCGCCAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TTWKLVRWWENSWWTLVEGNGAI*AARLGE
Trigger: CTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCC...TTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCAGGCAATGGTGCGATCTaGGCCGCCAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAGNGAI*AARLGE
Trigger: CTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCC...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTAGCCCTCGAAATCGGTaGCGTCTGCCACGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AYHLETGEVVGELLVDPSSPRNR*RLPRRA
Trigger: GGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCT...ACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp TCCAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCCGTCTAGTCCACACCTaGGGAGTTGGTCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: SRALGIAAFQPSKSVTSARLVHT*GVGQVE
Trigger: TTCTACCTGACCAACTCCTCAGGTGTGGACTAGACG...GGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp CCTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCGGCAGAATATCTCCTTaGAGCTCTGAGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGEVQGVGAPGFIGADHTGRISP*SSEQPQ
Trigger: CTGGGGCTGCTCAGAGCTTCAAGGAGATATTCTGCC...GGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588205.5
CDS-3UTR GCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTGCCCAGATCCTGGCTaGGGTAGCTGCAACGGCCGT +
Preference number: 4 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLCPDPG*GSCNGR
Trigger: ACGGCCGTTGCAGCTACCGCAGCCAGGATCTGGGCA...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: EIGDVCHEEPFAEHQGFVEGSWP*LDAQIL
Trigger: CAGGATCTGGGCATCCAGGCACGGCCATGACCCCTC...AACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GTTCAGGCCTTTGTACCGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGAGGCCTCGGTTCCCGTaGACTGGACCTCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: VQAFVPGQQLEGHSVEFQRPRFP*TGPHPA
Trigger: TGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT...CTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTACAAAGGCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS-3UTR GCA 90 bp CGACAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACGCCAGCCCAGGGACTTaGAGTCGGCCAGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RQGDVNPSGVEVPEKVPDASPGT*SRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGC...GTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR GCA 90 bp GCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AYHLETGEVVGELLVDPSSRACS*SSASPG
Trigger: CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGA...ACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGAPGFIGADHTSVSLVPRLSRA*SCSSAS
Trigger: GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACG...AGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR GCA 90 bp CTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCACGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LERSRVWVLLVSLVQTTPRLSRA*SCSSAS
Trigger: GCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACG...TGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR GCA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HLETGEVVGELLVDPSGSPASLS*LQLLFS
Trigger: GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGG...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCTCCTGGTTTCATTGGTaGAGACCACACCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: HQRLSRACSCSSASPGTCSWFHW*RPHQRL
Trigger: GAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGA...GCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR GCA 90 bp GTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGATCTTCGGAAGCCGTTGAAGTaGCCTGCCGGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VELQLKELLREHHGEADLRKPLK*PAGQGK
Trigger: CTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCG...AAGATCCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCCCGCTCACCATTGGTaGAGACCACACCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: LTIGADHTSVSLVPAVALPAHHW*RPHQRL
Trigger: GAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGG...AAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR GCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCAAGGGCGTCCTCGCCCTaGACATTCACGCTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SAQVSRATSGGRLLKVIARASSP*TFTLGF
Trigger: GAACCCAAGCGTGAATGTGCAGGGCGAGGACGCCCT...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586720.5
CDS-3UTR CCA 90 bp ACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGGTCATGGCCGTGCCTaGATGCCCAGATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TPGTVCHKGTPGGRGVNPGHGRA*MPRSWL
Trigger: CAGCCAGGATCTGGGCATCCAGGCACGGCCATGACC...CGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: LEGLVGVVSVVRGGLEVIASEGS*PCLDAQ
Trigger: CTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGC...GATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCACCATCGTTCACGCCTTaGGTTCCTGCAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGSIMGKRIFSTKPSTSSPSFTP*VPATSS
Trigger: GCTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGG...TGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGTGTTGTGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCCCGGCAGACGACGCTaGCATCAGTCAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: GVVESGRTGRGSICSQRGPGRRR*HQSGPT
Trigger: TGTGGGACCTGACTGATGCCAGCGTCGTCTGCCGGG...CCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCACAACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCGGGTGTGGGTGCTCCTaGTTTCATTGGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: PGEVQGVGAPGFIGADHTGCGCS*FHWCRP
Trigger: TGGTCTGCACCAATGAAACCAGGAGCACCCACACCC...GGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CCA 90 bp AGGGACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGGTCAGGATGACCGTGTaGCCACAGAAGCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RDRLNCSSKSSSGSIMGKVRMTV*PQKPRA
Trigger: CGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGAC...CTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTCGGTCCTTCCACAGGGCCTaGGCCTCCAGGTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: EASLWKHLTDDRVMSILRSFHRA*ASRLAV
Trigger: GACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGA...CCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GAGAAGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTAGGTCCAGGGGCATCTaGAACGAGGGGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EKVPDHGHTLSIHTHGDIRSRGI*NEGSWG
Trigger: CCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCT...AATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGGTTGGAGCAGGTCTGTaGGGACACTGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRVGAGL*GHWARP
Trigger: AGGCCTGGCCCAGTGTCCCCACAGACCTGCTCCAAC...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCTGGGCAGCAGCAGTTaGAGCAGGTCTGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: LETGEVVGELLVDPSGSLLGSSS*SRSVGT
Trigger: TGTCCCCACAGACCTGCTCCAACTGCTGCTGCCCAG...AAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTTGGAACAGGGCCTCGTaGCTCCAGTACAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: AYHLETGEVVGELLVDPSWNRAS*LQYRDR
Trigger: CCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCA...ACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGGGCTTGTAGGTGGAACAGGGCCTCGTaGCTCCAGTACAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: CLSQRHSRWARCKSGACRWNRAS*LQYRDR
Trigger: CCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCA...CCTACAAGCCCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAATGCAGAGTCTTCTTCTaGAACAGGGCCTCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PRGRPGAYHLETGEVVGECRVFF*NRASWL
Trigger: GAGCCACGAGGCCCTGTTCCAGAAGAAGACTCTGCA...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAATGGAAGGGCACAGTGTaGAATTCCAGGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PRGRPGAYHLETGEVVGEWKGTV*NSRACR
Trigger: TCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGTGGAAGGGCACAGTGTaGAATTCCAGGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SNLEGVLVLTTWKLVRWWWKGTV*NSRACR
Trigger: TCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA...CCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTACCGGGCCAGCAACTaGAAGGGCACAGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRYRASN*KGTVWN
Trigger: ATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTA...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCAAAGGCACTCCAGGTaGGCGAGGTGTAAATCCGGG +
Preference number: 4 (lower is better)
Translates to: HLETGEVVGELLVDPSGSQRHSR*ARCKSG
Trigger: CCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTG...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACCAAAGGCCCCCGTCTaGACTGATAGACCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PRGRPGAYHLETGEVVGEPKAPV*TDRPVV
Trigger: CACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGG...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGTACCGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGCCAAAGGCCCCCGTCTaGACTGATAGACCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: CTGPATGRAQCGIPGPAEPKAPV*TDRPVV
Trigger: CACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGG...CTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp ACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCAGTATCCAGCAGCTCTGGATaGTGGGGAGGTAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: TGEVVGELLVDPSGSLPVSSSSG*WGGRPG
Trigger: CCCTGGTCTACCTCCCCACCATCCAGAGCTGCTGGA...TACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp ACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCAGTATGGTGTCCAGGGCACTaGGAATCGCAGCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TGEVVGELLVDPSGSLPVWCPGH*ESQPSS
Trigger: GCTGGAAGGCTGCGATTCCCAGTGCCCTGGACACCA...TACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGTGCTCTTCGAGCTGTTaGTGTCCAGGGCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: SNLEGVLVLTTWKLVRWWCSSSC*CPGHWE
Trigger: TTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCA...CCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGTGCTCTTCGAGCTGTTaGTGTCCAGGGCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: PEQPRGRPGAYHLETGEVCSSSC*CPGHWE
Trigger: TTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCA...CACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTCCACACCTGAGGAGTTaGTCAGGTAGAAGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: GPATGRAQCGIPGPAESSPHLRS*SGRRGG
Trigger: TCCGCCCCTTCTACCTGACCAACTCCTCAGGTGTGG...AGAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCAGGTTCTCACCACCCTTaGGCCACGCCGTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAGSHHP*ATPSSP
Trigger: TGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACC...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCATGTGGTGGGAGAACTCCTaGTGGACCCTAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: REHHGEADLLHQALHLLMWWENS*WTLVEA
Trigger: GGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCA...CATGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp CTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTTGCAGACTGGTCCTTTaGCCCAGAAGCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LTIGADHTSVSLVPAVALCRLVL*PRSLSQ
Trigger: CTGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCA...AAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588990.5
CDS-3UTR TCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLGPHPA*WGLILA
Trigger: GGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCC...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000591778.5
CDS-3UTR TCA 90 bp TGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAACCTGCACATTCACGCTaGTGGACAGGTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WSLEGLVGVVSVVRGGLEPAHSR*WTGRSP
Trigger: GGGGCTGCGACCTGTCCATCAGCGTGAATGTGCAGG...TTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp CTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCATCCACACTCATGGTaGCATTGCTGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LETGEVVGELLVDPSGSLHPHSW*HCCPAP
Trigger: AGGAGCCGGGCAGCAATGTCACCATGAGTGTGGATG...AAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp GACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGCATCCACACTCATGGTaGCATTGCTGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DRLNCSSKSSSGSIMGKRHPHSW*HCCPAP
Trigger: AGGAGCCGGGCAGCAATGTCACCATGAGTGTGGATG...CCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp CTCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: LREHHGEADLLHQALHLLCRYPR*GSGLCT
Trigger: GGTACAAAGGCCTGAACCTCACCGAGGATACCTACA...GAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGAATCAGAAGAATATTTaGCCAAAGGCCCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: KPLKCPAGQGKEEVLFELNQKNI*PKAPVW
Trigger: CCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATT...CAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp ACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGAGCCCTCGAAATCGGTaGCGTCTGCCACGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TPGTVCHKGTPGGRGVNPSPRNR*RLPRRA
Trigger: GGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCT...CGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp CCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGCGTCTAGTCCACACCTaGGGAGTTGGTCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: PALEIGDVCHEEPFAEHQRLVHT*GVGQVE
Trigger: TTCTACCTGACCAACTCCTCAGGTGTGGACTAGACG...CTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCCTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVLVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp CTTCCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPALEIGDVCHEEPFAEHLVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...ATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTGAGGTTCAGGCCTTTGGTCCAGGGTGTGGGTaGTCCTGGTTTCATTGGTGC +
Preference number: 4 (lower is better)
Translates to: GRGVNPGLVGILGEVQAFGPGCG*SWFHWC
Trigger: GCACCAATGAAACCAGGAGCACCCACACCCTGGACC...AAAGGCCTGAACCTCACCGAGGATACCTACAAGCCCCGGATTTACACCTCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS-3UTR GCA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGAGGGCGTCCTCGCCCTaGACATTCACGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRRASSP*TFTLMD
Trigger: GTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCT...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
CDS-3UTR GCA 90 bp AGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGCTGAGGGCGTCCTCGCCCTaGACATTCACGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: RSLTMGTHSASTLMVTLLRASSP*TFTLMD
Trigger: GTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCT...CAGCAATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR GCA 90 bp GCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGATGGCAAAGAGGCTTaGGCAGTAGCCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AYHLETGEVVGELLVDPSDGKEA*AVALQL
Trigger: CAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC...ACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAGTCCCCTGTGGCCACTaGATAGGCATACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YHLETGEVVGELLVDPSGVPCGH*IGIQVQ
Trigger: CTGGACCTGTATGCCTATGCAGTGGCCACAGGGGAC...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCACTGGAATTCCAGGGCCTaGAGAGTCTTCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QGTGNRSLPALEIGDVCHWNSRA*RVFFWN
Trigger: GTTCCAGAAGAAGACTCTGCAGGCCCTGGAATTCCA...GTGGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGGAAATCGGTGACGTCTaGCACGAAGAGCCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWEIGDV*HEEPFA
Trigger: TGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCGAAATCGGTGACGTCTaGCACGAAGAGCCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: LVLTTWKLVRWWENSWWTEIGDV*HEEPFA
Trigger: TGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC...GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTTCGAGGGCGTCCTGGTaGTTACCACCTGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: AYHLETGEVVGELLVDPSSRASW*LPPGNW
Trigger: CCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGA...ACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCATCGAGGGCGTCCTGGTaGTTACCACCTGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: SAQVSRATSGGRLLKVIASRASW*LPPGNW
Trigger: CCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGA...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp ACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCAGTATCGAGGGCGTCCTGGTaGTTACCACCTGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: TGEVVGELLVDPSGSLPVSRASW*LPPGNW
Trigger: CCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGA...TACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCATGGGAGGATCCCTCTGCAGACTaGTCCTTTGACCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SIMGKRIFSTKPSTSSWEDPSAD*SFDPEA
Trigger: GGCTTCTGGGTCAAAGGACCAGTCTGCAGAGGGATC...CTCCCATGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCATCGTTCACGCCTTaGGTTCCTGCAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LETGEVVGELLVDPSGSLPSFTP*VPATSS
Trigger: GCTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGG...AAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGTGCTCCTGGTTTCATTaGTGCAGACCACACCAGCGT +
Preference number: 4 (lower is better)
Translates to: PEQPRGRPGAYHLETGEVCSWFH*CRPHQR
Trigger: ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCA...CACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262776.8
CDS-3UTR CCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCGGGTGTGGGTGCTCCTaGTTTCATTGGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVGCGCS*FHWCRP
Trigger: TGGTCTGCACCAATGAAACCAGGAGCACCCACACCC...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000587251.5
CDS-3UTR CCA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGGGGTGTGGGTGCTCCTaGTTTCATTGGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWGCGCS*FHWCRP
Trigger: TGGTCTGCACCAATGAAACCAGGAGCACCCACACCC...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000587251.5
CDS-3UTR CCA 90 bp AGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGCTGAGGTCGCAGCCCCGCTaGCTGTCAAAGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSLTMGTHSASTLMVTLLRSQPR*LSKIWP
Trigger: TGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCT...CAGCAATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCGCAGAGGCCAGCTTGTaGAAGCACTTGACTGACGAC +
Preference number: 4 (lower is better)
Translates to: HLETGEVVGELLVDPSGSAEASL*KHLTDD
Trigger: GTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAACCTGGGGGAGGAGGATaGCAAAGAGGCTTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: QLKELLREHHGEADLLHQPGGGG*QRGLRS
Trigger: ACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGG...TTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGAGGTCCAGGGGCATCTaGAACGAGGGGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRTGRGSICSQRGLGSNQRSRGI*NEGSWG
Trigger: CCCCCAGGACCCCTCGTTCCAGATGCCCCTGGACCT...CTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTTGGAGCAGGTCTGTaGGGACACTGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: WSLEGLVGVVSVVRGGLEVGAGL*GHWARP
Trigger: AGGCCTGGCCCAGTGTCCCCACAGACCTGCTCCAAC...TTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GCAGAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTGTTGGAGCAGGTCTGTaGGGACACTGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AEASLWKHLTDDRVMSILVGAGL*GHWARP
Trigger: AGGCCTGGCCCAGTGTCCCCACAGACCTGCTCCAAC...AAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GGTGTTGTGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTGGGCAGCAGCAGTTaGAGCAGGTCTGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GVVESGRTGRGSICSQRGLGSSS*SRSVGT
Trigger: TGTCCCCACAGACCTGCTCCAACTGCTGCTGCCCAG...CCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCACAACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCTGCAGAGTCTTCTTCTaGAACAGGGCCTCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVCRVFF*NRASWL
Trigger: GAGCCACGAGGCCCTGTTCCAGAAGAAGACTCTGCA...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCTGGAAGGGCACAGTGTaGAATTCCAGGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HLETGEVVGELLVDPSGSWKGTV*NSRACR
Trigger: TCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCGACACCCTCTTGTCCTaGAAGAGGAAGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVDTLLS*KRKLGC
Trigger: ACACCCCAGCTTCCTCTTCCAGGACAAGAGGGTGTC...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCATGGACACCCTCTTGTCCTaGAAGAGGAAGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: REHHGEADLLHQALHLLMDTLLS*KRKLGC
Trigger: ACACCCCAGCTTCCTCTTCCAGGACAAGAGGGTGTC...CATGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGTTTTCGTAGGCAATaGTGCGATCTGAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRCFRRQ*CDLSRQ
Trigger: CTGGCGGCTCAGATCGCACCATTGCCTACGAAAACA...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCTGGTGTCCAGGGCACTaGGAATCGCAGCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HSRNCLSQRHSRWARCKSWCPGH*ESQPSS
Trigger: GCTGGAAGGCTGCGATTCCCAGTGCCCTGGACACCA...GGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCACCACACCTGAGGAGTTaGTCAGGTAGAAGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAPHLRS*SGRRGG
Trigger: TCCGCCCCTTCTACCTGACCAACTCCTCAGGTGTGG...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGACCACACCTGAGGAGTTaGTCAGGTAGAAGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: YHLETGEVVGELLVDPSGPHLRS*SGRRGG
Trigger: TCCGCCCCTTCTACCTGACCAACTCCTCAGGTGTGG...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGTTCTCACCACCCTTaGGCCACGCCGTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: HSRNCLSQRHSRWARCKSGSHHP*ATPSSP
Trigger: TGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACC...GGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCTGGGAGAACTCCTGGTaGACCCTAGTGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LVLTTWKLVRWWENSWWTWENSW*TLVEAF
Trigger: GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCA...GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTTGGTGGGAGAACTCCTaGTGGACCCTAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KGTPGGRGVNPGLVGILGWWENS*WTLVEA
Trigger: GGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCA...ACCGAGGATACCTACAAGCCCCGGATTTACACCTCGCCCACCTGGAGTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCATGGAAACTGGTGAGGTaGTGGGAGAACTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGSIMGKRIFSTKPSTSSWKLVR*WENSWW
Trigger: CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA...TGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAACCTCGAGGGCGTCCTaGTGCTTACCACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: YHLETGEVVGELLVDPSGTSRAS*CLPPGN
Trigger: GTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGT...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CAA 72 bp GCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGGAAGGAAGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: AQVSRATSGGRL*KVIAERKEAEE
Trigger: CTCCTCGGCTTCCTTCCTCTCTGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CAA 72 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAGAGGAAGGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SAQVSRATSGGR*LKVIAERKEAE
Trigger: CTCGGCTTCCTTCCTCTCTGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
3UTR CAA 72 bp TGGAACAGGGCCTCGTGGCTCCAGTACAGGGACAGGTaGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATC +
Preference number: 4 (lower is better)
Translates to: WNRASWLQYRDR*NCSSKSSSGSI
Trigger: GATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTGGAGCCACGAGGCCCTGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GAGAAGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGGTTGGCAGTCAGGATaGCCGTGTGGCCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: EKVPDHGHTLSIHTHGDIGWQSG*PCGHRS
Trigger: GCTTCTGTGGCCACACGGTCATCCTGACTGCCAACC...AATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR TCA 90 bp CCAGCCCTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: PALEIGDVCHEEPFAEHQVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...CTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: GPATGRAQCGIPGPAESSCRYPR*GSGLCT
Trigger: GGTACAAAGGCCTGAACCTCACCGAGGATACCTACA...AGAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAAATCAGAAGAATATTTaGCCAAAGGCCCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: RLGEAQDRELVRGAGEAVNQKNI*PKAPVW
Trigger: CCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATT...TACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFLVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp ACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAATGACCTCAGACCAGTaGCAAGGGCAGACTGACCAG +
Preference number: 4 (lower is better)
Translates to: TTWKLVRWWENSWWTLVEMTSDQ*QGQTDQ
Trigger: CTGGTCAGTCTGCCCTTGTCACTGGTCTGAGGTCAT...TTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTTCCTGGTTTCATTGGTaGAGACCACACCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VGAPGFIGADHTSVSLVPSWFHW*RPHQRL
Trigger: GAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGA...AGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR GCA 90 bp AGGGACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGGATGGCAAAGAGGCTTaGGCAGTAGCCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RDRLNCSSKSSSGSIMGKDGKEA*AVALQL
Trigger: CAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC...CTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCTTTCGTAGGCAATGGTaGGATCTGAGCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LVLTTWKLVRWWENSWWTFRRQW*DLSRQT
Trigger: AGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAA...GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGAGGGGGCTTGGAAGTAATCAGAAGAATATTTGACCAAAGGCCCCCGTCTGGAGCCAGCCCAGGGACTTaGAGTCGGCCAGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RGGLEVIRRIFDQRPPSGASPGT*SRPVRQ
Trigger: CTGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGC...TCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCCCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS-3UTR CCA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGTGCTCCTGGTTTCATTaGTGCAGACCACACCAGCGT +
Preference number: 4 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWCSWFH*CRPHQR
Trigger: ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCA...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000587251.5
CDS-3UTR CCA 90 bp AGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCTCCTGGTTTCATTaGTGCAGACCACACCAGCGT +
Preference number: 4 (lower is better)
Translates to: RVWVLLVSLVQTTPASLSCSWFH*CRPHQR
Trigger: ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCA...CGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCAGCAGAGGCCAGCTTGTaGAAGCACTTGACTGACGAC +
Preference number: 4 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAAEASL*KHLTDD
Trigger: GTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGAGCATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTGAGCCGCCAGACTCCTGGGGGAGGAGGATaGCAAAGAGGCTTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: RASGLCFRRQWCDLSRQTPGGGG*QRGLRS
Trigger: ACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGG...AGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGATACCGGGCCAGCAACTaGAAGGGCACAGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: YHLETGEVVGELLVDPSGYRASN*KGTVWN
Trigger: ATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTA...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGTACCGGGCCAGCAACTaGAAGGGCACAGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: DRLNCSSKSSSGSIMGKRYRASN*KGTVWN
Trigger: ATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTA...CCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GTTCAGGCCTTTGTACCGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGACACCCTCTTGTCCTaGAAGAGGAAGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VQAFVPGQQLEGHSVEFQDTLLS*KRKLGC
Trigger: ACACCCCAGCTTCCTCTTCCAGGACAAGAGGGTGTC...CTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTACAAAGGCCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAATCCAGCAGCTCTGGATaGTGGGGAGGTAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: WSLEGLVGVVSVVRGGLESSSSG*WGGRPG
Trigger: CCCTGGTCTACCTCCCCACCATCCAGAGCTGCTGGA...TTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTTGTTTTCGTAGGCAATaGTGCGATCTGAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GPATGRAQCGIPGPAESSCFRRQ*CDLSRQ
Trigger: CTGGCGGCTCAGATCGCACCATTGCCTACGAAAACA...AGAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CGCAGAGCATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTGAGCCGCCAGTGCTCTTCGAGCTGTTaGTGTCCAGGGCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: RRASGLCFRRQWCDLSRQCSSSC*CPGHWE
Trigger: TTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCA...CTGGCGGCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATGCTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTTGCTCTTCGAGCTGTTaGTGTCCAGGGCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: KGTPGGRGVNPGLVGILGCSSSC*CPGHWE
Trigger: TTCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCA...ACCGAGGATACCTACAAGCCCCGGATTTACACCTCGCCCACCTGGAGTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GCCCTTCGCAGAGCATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTGAGCCCACACCTGAGGAGTTaGTCAGGTAGAAGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: ALRRASGLCFRRQWCDLSPHLRS*SGRRGG
Trigger: TCCGCCCCTTCTACCTGACCAACTCCTCAGGTGTGG...GCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATGCTCTGCGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCGGTTCTCACCACCCTTaGGCCACGCCGTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSNFLKLSAQVSRATSGGGSHHP*ATPSSP
Trigger: TGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACC...GCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGATCTTGGTTCTCACCACCCTTaGGCCACGCCGTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: VELQLKELLREHHGEADLGSHHP*ATPSSP
Trigger: TGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACC...AAGATCCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTTGGGAGAACTCCTGGTaGACCCTAGTGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: AYHLETGEVVGELLVDPSWENSW*TLVEAF
Trigger: GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCA...ACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCATGGAAACTGGTGAGGTaGTGGGAGAACTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SAQVSRATSGGRLLKVIAWKLVR*WENSWW
Trigger: CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGATCACTGGGGATACCTaGTGCTTGGGTTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: RVWVLLVSLVQTTPASLSITGDT*CLGSCN
Trigger: GTTGCAGGAACCCAAGCACCAGGTATCCCCAGTGAT...CGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR CCA 90 bp AGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGCCAAGTCATCATCACTaGGGATACCTGGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RVWVLLVSLVQTTPASLSPSHHH*GYLVLG
Trigger: CCCAAGCACCAGGTATCCCCAGTGATGATGACTTGG...CGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR CCA 90 bp CCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCACCATCGTTCACGCCTaGTGCTTCAAGCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PLVQTTPASLSCLQLLFSTIVHA*CFKQER
Trigger: TCTCTCCTGCTTGAAGCACCAGGCGTGAACGATGGT...GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588899.1
CDS-3UTR TCA 90 bp GAGAAGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTCATCCACACTCATGGTaGCATTGCTGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EKVPDHGHTLSIHTHGDIHPHSW*HCCPAP
Trigger: AGGAGCCGGGCAGCAATGTCACCATGAGTGTGGATG...AATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR TCA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCTGTAGGTATCCTCGGTaGGGTTCAGGCCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFCRYPR*GSGLCT
Trigger: GGTACAAAGGCCTGAACCTCACCGAGGATACCTACA...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp CTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCGTCTAGTCCACACCTaGGGAGTTGGTCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: LETGEVVGELLVDPSGSLRLVHT*GVGQVE
Trigger: TTCTACCTGACCAACTCCTCAGGTGTGGACTAGACG...AAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGCTGGTGGCCGGTTGTTaGAGGTCATTGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLLVAGC*RSLQRG
Trigger: TCCTCTCTGCAATGACCTTCAACAACCGGCCACCAG...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CGACAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACGATGGCAAAGAGGCTTaGGCAGTAGCCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RQGDVNPSGVEVPEKVPDDGKEA*AVALQL
Trigger: CAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC...GTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR GCA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGATTTCGTAGGCAATGGTaGGATCTGAGCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: YHLETGEVVGELLVDPSGFRRQW*DLSRQT
Trigger: AGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAA...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGAGGGGAAGGAGGAGGTaGTCTTCGAGCTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLRGRRR*SSSCWC
Trigger: ACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCT...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTAGCCTTCCACACTTCTaGTTTTGGTATTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HTSVSLVPAVALQPAQGLSLPHF*FWYFPG
Trigger: CCCTGGGAAATACCAAAAGCAGAAGTGTGGAAGGCT...AAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR GCA 90 bp AGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGCGTATCGTTCACGCCTGGTaGTTCAAGCAGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RGPGCGCSWFHWCRPHQRIVHAW*FKQERR
Trigger: TCTTCTCTCCTGCTTGAAGCACCAGGCGTGAACGAT...ACGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588205.5
CDS-3UTR CCA 90 bp GCAGAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTCCATCGTTCACGCCTTaGGTTCCTGCAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AEASLWKHLTDDRVMSILPSFTP*VPATSS
Trigger: GCTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGG...AAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp ATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTTTCGCAGAGGCCAGCTTGTaGAAGCACTTGACTGACGAC +
Preference number: 4 (lower is better)
Translates to: IGDVCHEEPFAEHQGFVFAEASL*KHLTDD
Trigger: GTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC...GAAAACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACCATCCTGGGGGAGGAGGATaGCAAAGAGGCTTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: QGDVNPSGVEVPEKVPDHPGGGG*QRGLRS
Trigger: ACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGG...ATGGTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp GAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTTGGAAGGGCACAGTGTaGAATTCCAGGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EIGDVCHEEPFAEHQGFVWKGTV*NSRACR
Trigger: TCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA...AACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGATCTTCAAAGGCACTCCAGGTaGGCGAGGTGTAAATCCGGG +
Preference number: 4 (lower is better)
Translates to: VELQLKELLREHHGEADLQRHSR*ARCKSG
Trigger: CCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTG...AAGATCCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGTCCAGCAGCTCTGGATaGTGGGGAGGTAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: GRTGRGSICSQRGLGSNQSSSSG*WGGRPG
Trigger: CCCTGGTCTACCTCCCCACCATCCAGAGCTGCTGGA...CTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTCGGTGGGAGAACTCCTGGTaGACCCTAGTGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: EASLWKHLTDDRVMSILRWENSW*TLVEAF
Trigger: GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCA...CCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp GGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGTGCAGACTGGTCCTTTaGCCCAGAAGCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRTGRGSICSQRGLGSNQCRLVL*PRSLSQ
Trigger: CTGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCA...CTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
CDS-3UTR TCA 90 bp AGAGGGGGCTTGGAAGTAATCAGAAGAATATTTGACCAAAGGCCCCCGTCTGGAGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: RGGLEVIRRIFDQRPPSGGPHPA*WGLILA
Trigger: GGCAAGGATCAGGCCCCATCATGCTGGATGAGGTCC...TCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCCCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS-3UTR TCA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAATCAGAAGAATATTTaGCCAAAGGCCCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: GAYHLETGEVVGELLVDPNQKNI*PKAPVW
Trigger: CCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATT...AGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGAAGAGGCAATGGTGCGATCTaGGCCGCCAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLVGVVSVVRGGLEVIRRGNGAI*AARLGE
Trigger: CTCACCAAGTCTGGCGGCTCAGATCGCACCATTGCC...TCTTCTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGCGTCTAGTCCACACCTaGGGAGTTGGTCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLRLVHT*GVGQVE
Trigger: TTCTACCTGACCAACTCCTCAGGTGTGGACTAGACG...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp CAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAACGTCTAGTCCACACCTaGGGAGTTGGTCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: QLKELLREHHGEADLLHQRLVHT*GVGQVE
Trigger: TTCTACCTGACCAACTCCTCAGGTGTGGACTAGACG...TTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGCTGTCCTGGTTTCATTGGTaGAGACCACACCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RSLTMGTHSASTLMVTLLSWFHW*RPHQRL
Trigger: GAGACGCTGGTGTGGTCTGCACCAATGAAACCAGGA...CAGCAATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS-3UTR GCA 90 bp CAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACCATGTCCCCTGTGGCCACTaGATAGGCATACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QGDVNPSGVEVPEKVPDHVPCGH*IGIQVQ
Trigger: CTGGACCTGTATGCCTATGCAGTGGCCACAGGGGAC...ATGGTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR GCA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGATGGAATTCCAGGGCCTaGAGAGTCTTCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: YHLETGEVVGELLVDPSGWNSRA*RVFFWN
Trigger: GTTCCAGAAGAAGACTCTGCAGGCCCTGGAATTCCA...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CTCGAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTTGGAATTCCAGGGCCTaGAGAGTCTTCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LEIGDVCHEEPFAEHQGFWNSRA*RVFFWN
Trigger: GTTCCAGAAGAAGACTCTGCAGGCCCTGGAATTCCA...AAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp GCCTCGTGGCTCCAGTACAGGGACAGGTTGAACTGCAGCTCAAAGAGCTCCTCATGGAATTCCAGGGCCTaGAGAGTCTTCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: ASWLQYRDRLNCSSKSSSWNSRA*RVFFWN
Trigger: GTTCCAGAAGAAGACTCTGCAGGCCCTGGAATTCCA...TGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTGGAGCCACGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGGGACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGTTTCGTAGGCAATGGTaGGATCTGAGCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: RDRLNCSSKSSSGSIMGKFRRQW*DLSRQT
Trigger: AGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAA...CTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp TCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCAGGGGAAGGAGGAGGTaGTCTTCGAGCTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSNFLKLSAQVSRATSGGRGRRR*SSSCWC
Trigger: ACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCT...GCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTATCGTTCACGCCTGGTaGTTCAAGCAGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LTIGADHTSVSLVPAVALIVHAW*FKQERR
Trigger: TCTTCTCTCCTGCTTGAAGCACCAGGCGTGAACGAT...AAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588899.1
CDS-3UTR CCA 90 bp TCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCGATCCCTCTGCAGACTaGTCCTTTGACCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSNFLKLSAQVSRATSGGDPSAD*SFDPEA
Trigger: GGCTTCTGGGTCAAAGGACCAGTCTGCAGAGGGATC...GCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AAGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGCTGCAGAGGCCAGCTTGTaGAAGCACTTGACTGACGAC +
Preference number: 4 (lower is better)
Translates to: KVPDHGHTLSIHTHGDIAAEASL*KHLTDD
Trigger: GTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC...AGCAATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CCA 90 bp AAGCCTTCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGCAGGGCGTCCCCTGTaGCCACTGCATAGGCATACA +
Preference number: 4 (lower is better)
Translates to: KPSSNFLKLSAQVSRATSAGRPL*PLHRHT
Trigger: TGTATGCCTATGCAGTGGCCACAGGGGACGCCCTGC...AGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAATGGAAGGGCACAGTGTaGAATTCCAGGGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: WSLEGLVGVVSVVRGGLEWKGTV*NSRACR
Trigger: TCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCA...TTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAGACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GAGGAAGCTGGGGTGTTGTGGAGTCTGGAAGGACTGGTAGGGGTAGTATCTGTATACCGGGCCAGCAACTaGAAGGGCACAGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: EEAGVLWSLEGLVGVVSVYRASN*KGTVWN
Trigger: ATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTA...TACAGATACTACCCCTACCAGTCCTTCCAGACTCCACAACACCCCAGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CGACAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACGACACCCTCTTGTCCTaGAAGAGGAAGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: RQGDVNPSGVEVPEKVPDDTLLS*KRKLGC
Trigger: ACACCCCAGCTTCCTCTTCCAGGACAAGAGGGTGTC...GTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GCCCTTCGCAGAGCATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTGAGCTGTTTTCGTAGGCAATaGTGCGATCTGAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: ALRRASGLCFRRQWCDLSCFRRQ*CDLSRQ
Trigger: CTGGCGGCTCAGATCGCACCATTGCCTACGAAAACA...GCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATGCTCTGCGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp TGTCTGTCACAAAGGCACTCCAGGTGGGCGAGGTGTAAATCCGGGGCTTGTAGGTGGCTGTCAAAGATCTaGCCAAGGGCCTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: CLSQRHSRWARCKSGACRWLSKI*PRASVE
Trigger: TTCTACAGAGGCCCTTGGCCAGATCTTTGACAGCCA...CCTACAAGCCCCGGATTTACACCTCGCCCACCTGGAGTGCCTTTGTGACAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587311.5
CDS-3UTR TCA 90 bp GGCTTGGAAGTAATCAGAAGAATATTTGACCAAAGGCCCCCGTCTGGACTGATACAGCATGATGGGGCCTaGTCCTTGCCCGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLEVIRRIFDQRPPSGLIQHDGA*SLPEGS
Trigger: GCTGCCTTCGGGCAAGGATCAGGCCCCATCATGCTG...TATCAGTCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS-3UTR TCA 90 bp GGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGATGACCTCAGACCAGTaGCAAGGGCAGACTGACCAG +
Preference number: 4 (lower is better)
Translates to: GRTGRGSICSQRGLGSNQMTSDQ*QGQTDQ
Trigger: CTGGTCAGTCTGCCCTTGTCACTGGTCTGAGGTCAT...CTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp AGAGCATCAGGGCTTTGTTTTCGTAGGCAATGGTGCGATCTGAGCCGCCAGACTTTTCGTAGGCAATGGTaGGATCTGAGCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: RASGLCFRRQWCDLSRQTFRRQW*DLSRQT
Trigger: AGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAA...AGTCTGGCGGCTCAGATCGCACCATTGCCTACGAAAACAAAGCCCTGATGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR GCA 90 bp CAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACCATAGGGGAAGGAGGAGGTaGTCTTCGAGCTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: QGDVNPSGVEVPEKVPDHRGRRR*SSSCWC
Trigger: ACACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCT...ATGGTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGCCAAAGGCCCCCGTCTaGACTGATAGACCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GRTGRGSICSQRGLGSNQPKAPV*TDRPVV
Trigger: CACAACTGGTCTATCAGTCCAGACGGGGGCCTTTGG...CTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp TCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: SSNFLKLSAQVSRATSGGVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...GCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AAGCCTTCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTTGGGAGAACTCCTGGTaGACCCTAGTGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KPSSNFLKLSAQVSRATSWENSW*TLVEAF
Trigger: GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCA...AGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp AGAGGGGGCTTGGAAGTAATCAGAAGAATATTTGACCAAAGGCCCCCGTCTGGAAAACTGGTGAGGTGGTaGGAGAACTCCTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: RGGLEVIRRIFDQRPPSGKLVRW*ENSWWT
Trigger: GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTT...TCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCCCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp CAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACCATCTGCCTCATTCACTCTaGAAGGCTCCATTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QGDVNPSGVEVPEKVPDHLPHSL*KAPLVQ
Trigger: CTGCACCAATGGAGCCTTCCAGAGTGAATGAGGCAG...ATGGTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR TCA 90 bp GGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: GRTGRGSICSQRGLGSNQVEALD*RQGDVN
Trigger: ATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCAC...CTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR TCA 90 bp GAGAAGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTAATCAGAAGAATATTTaGCCAAAGGCCCCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: EKVPDHGHTLSIHTHGDINQKNI*PKAPVW
Trigger: CCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATT...AATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CCA 90 bp GGCTTGGAAGTAATCAGAAGAATATTTGACCAAAGGCCCCCGTCTGGACTGATATGGTGGGAGAACTCCTaGTGGACCCTAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLEVIRRIFDQRPPSGLIWWENS*WTLVEA
Trigger: GGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCA...TATCAGTCCAGACGGGGGCCTTTGGTCAAATATTCTTCTGATTACTTCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGAAGAATATTTGACCAAGCAGTGAGGGCGTCCTaGGGTTCTCCGGTTCTCACC +
Preference number: 4 (lower is better)
Translates to: VVSVVRGGLEVIRRIFDQAVRAS*GSPVLT
Trigger: GGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGC...TTGGTCAAATATTCTTCTGATTACTTCCAAGCCCCCTCTGACTACAGATACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CCA 90 bp GTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGAAGAATATTTGACCAAAAACTGGTGAGGTGGTaGGAGAACTCCTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: VVSVVRGGLEVIRRIFDQKLVRW*ENSWWT
Trigger: GGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTT...TTGGTCAAATATTCTTCTGATTACTTCCAAGCCCCCTCTGACTACAGATACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CTGGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 5 (lower is better)
Translates to: LASVEDLHAALVGGAPIGSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...GCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp CCCAGGGCACACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTGAGCCAGCCCAGGGACTaGCAGTCGGCCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: PRAHWGLRREVRPRSPLVSQPRD*QSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCT...CACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTGTGCCCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp GAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAGCTTTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 5 (lower is better)
Translates to: EACAVALQLPGPIGRGQLSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...AAGCTGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CAA 90 bp GTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 5 (lower is better)
Translates to: VRPRSPLVQTTPASLSCLSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...CAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp AGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 5 (lower is better)
Translates to: RPHQRLSRACSCSSASPGSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp TGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGAGCCAGCCCAGGGACTaGCAGTCGGCCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: CSEGVLGFSGSHHPWATPSQPRD*QSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCT...CGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000591778.5
CDS CCA 90 bp CAGCAGCCACACCCAGAAGAGCCTCGGAGGGGTCATGGCCGTGCCTaGATGCCCAGATCCTGTGTAGAGAGAGGGGTGCCCTGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: QQPHPEEPRRGHGRA*MPRSCVERGVPWPG
Trigger: GCCCGGCCAGGGCACCCCTCTCTCTACACAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589775.6
CDS-3UTR CAA 90 bp CCTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 5 (lower is better)
Translates to: PGEVQGVGAPGFIGADHTSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...GGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CAA 90 bp CCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 5 (lower is better)
Translates to: PEQPRGRPGAYHLETGEVSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...CACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCTGGAAGCCAGCCCAGGGACTaGCAGTCGGCCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: AAPLAVKDLAKGLRELPGSQPRD*QSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCT...TCCAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588198.5
CDS-3UTR CAA 90 bp TGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTGAGCCGCCAGACTaGGTGAGGCCCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: CSEGVLGFSGSHHPWATPSEPPD*VRPRTG
Trigger: CCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGA...CGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCGCCCCCGCTCACCATaGGTGCAGACCACACCAGCG +
Preference number: 5 (lower is better)
Translates to: EVRPRSPLVQTTPASLSCRPRSP*VQTTPA
Trigger: CGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCG...GCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp CACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAGCCGCATGTCACCATCGTTGGGGCTCAGCTCACCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: HAALVGGAPIGQPHVTIVGAQLT*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGGTGAGCTGAGCCCC...AACGATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR CAA 90 bp AAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 5 (lower is better)
Translates to: KLSAQVSRATSGGRLLKVSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...GACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAGCCGCATCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VEDLHAALVGGAPIGQPHLSCLQ*LFSQPR
Trigger: CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAG...ATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp GGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCACTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GLCRRSPRGPGWWRPHRPLSCLQ*LFSQPR
Trigger: CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAG...TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp GAAGGGGCGGATGACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAACTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: EGADDRAEAVEVPCRAGELSCLQ*LFSQPR
Trigger: CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAG...TTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTCATCCGCCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGCCGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 5 (lower is better)
Translates to: QVGSQDDRVATEAQGVLAAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...GGCGAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CAA 90 bp CAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 5 (lower is better)
Translates to: QVAAPLAVKDLAKGLRELAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...GAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR CAA 90 bp CTGGAACGAGGGGTCCTGGGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCACCGTGCGGAAGCCGTaGAAGTGCCCTGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: LERGVLGEEDGKEACAVATVRKP*KCPAGQ
Trigger: CTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGT...GGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GAGGCCCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCAGCAGGCCCTACCTaGCCCGAAGGCAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: EAQDRELVRGAGEAVVPAAAGPT*PEGSSA
Trigger: GGCAGAGCTGCCTTCGGGCAAGGTAGGGCCTGCTGC...TGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS TCA 90 bp TGGGGCCTGATCCTGTGGACACAGCAGATGGCAGGGCTGGGGGCGTaGCGACTGCACCCAGGAGTCCCACAGCGCGACTCAGCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: WGLILWTQQMAGLGA*RLHPGVPQRDSALC
Trigger: ACAAAGGGCTGAGTCGCGCTGTGGGACTCCTGGGTGCAGTCGTCACGCCCCCAGCCCTGCCATCTGCTGTGTCCACAGGATCAGGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS TCA 90 bp GGCCTCGGTTCCCGTGCACTGGACCTCATCCAGCATGATGGGGCCTaGTCCTGTGGACACAGCAGATGGCAGGGCTGGGGGCGTGACGAC +
Preference number: 5 (lower is better)
Translates to: GLGSRALDLIQHDGA*SCGHSRWQGWGRDD
Trigger: GTCGTCACGCCCCCAGCCCTGCCATCTGCTGTGTCCACAGGATCAGGCCCCATCATGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS TCA 90 bp CGGCCAGTGAGGCCTCGGTTCCCGTGCACTGGACCTCATCCAGCATaGTGGGGCCTGATCCTGTGGACACAGCAGATGGCAGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RPVRPRFPCTGPHPA*WGLILWTQQMAGLG
Trigger: CCCCAGCCCTGCCATCTGCTGTGTCCACAGGATCAGGCCCCATCATGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCTCACTGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS GCA 90 bp CAACCAGCAGCCACACCCAGAAGAGCCTCGGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTGTGTAGAGAGAGGGGTGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: QPAATPRRASEGSWP*LDAQILCRERGALA
Trigger: GGCCAGGGCACCCCTCTCTCTACACAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGCTGCTGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589775.6
CDS CCA 90 bp CTGGCCAAGGGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTaGCGCCCCCATCGGCCAGCCGCATGTCACCATCGTTCACGCCTT +
Preference number: 5 (lower is better)
Translates to: LAKGLCRRSPRGPGW*RPHRPAACHHRSRL
Trigger: AAGGCGTGAACGATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCCCTTGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587311.5
CDS CCA 90 bp GATCTGGCCAAGGGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCAGCCGCATGTCACCATCGTTCACGC +
Preference number: 5 (lower is better)
Translates to: DLAKGLCRRSPRGPG*WRPHRPAACHHRSR
Trigger: GCGTGAACGATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCCCTTGGCCAGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587311.5
CDS-3UTR CAA 90 bp CACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTGCAGACCACACTGCAGACTGGTCCTTaGACCCAGAAGCCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: HWGLRREVRPRSPLVQTTLQTGP*TQKPLP
Trigger: TGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCAG...TGTGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588990.5
CDS-3UTR CAA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCATCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 5 (lower is better)
Translates to: SAQVSRATSGGRLLKVIASTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp ACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACAGCCAGCCCAGGGACTaGCAGTCGGCCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: TTPASLSCLQLLFSQPRDSQPRD*QSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCT...GTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp AGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGAGCCAGCCCAGGGACTaGCAGTCGGCCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: RPHQRLSRACSCSSASPGSQPRD*QSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCT...CCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp GACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: DRSQPRWLSKIWPRASESLSCLQ*LFSQPR
Trigger: CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAG...GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR CAA 90 bp CTCCAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 5 (lower is better)
Translates to: LQVGSQDDRVATEAQGVLAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...GAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CAA 90 bp GGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTGGTGGCGCCCCCATCGGCCAGGGGATACCTGGTGCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: GLCRRSPRGPGWWRPHRPGDTWC*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGCACCAGGTATCCCC...TGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588990.5
CDS-3UTR CAA 90 bp GCCCGGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTCTCTGGAAGGCTCCATaGGTGCAGACCACACCAGCG +
Preference number: 5 (lower is better)
Translates to: ARLLPQGLGLQVGSQDDRLWKAP*VQTTPA
Trigger: CGCTGGTGTGGTCTGCACCAATGGAGCCTTCCAGAG...ACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS CCA 90 bp TGCCTGGATGCCCAGATCCTGGCTGCGGTAGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGCCACAGGATCCCTCTGCAGACTGGT +
Preference number: 5 (lower is better)
Translates to: CLDAQILAAVAATAV*SLLASSHRIPLQTG
Trigger: ACCAGTCTGCAGAGGGATCCTGTGGCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGCTACCGCAGCCAGGATCTGGGCATCCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262776.8
ENST00000585407.5
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
ENST00000588990.5
ENST00000589906.5
ENST00000591778.5
CDS CCA 90 bp TTCCTGCAACCAGCAGCCACACCCAGAAGAGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAGATCCTGGCTGCGGTAGCTGCAACG +
Preference number: 5 (lower is better)
Translates to: FLQPAATPRRASEGS*PCLDAQILAAVAAT
Trigger: CGTTGCAGCTACCGCAGCCAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGCTGCTGGTTGCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262776.8
ENST00000585407.5
ENST00000586300.1
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
ENST00000588899.1
ENST00000588990.5
ENST00000589906.5
ENST00000591778.5
CDS CCA 90 bp CCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCTaGAGAGGTCCAGGGTGTGGGTGCTCCATTGGTGCAGACCACACC +
Preference number: 5 (lower is better)
Translates to: PAGCQRSGQGPPRAP*RGPGCGCSIGADHT
Trigger: GGTGTGGTCTGCACCAATGGAGCACCCACACCCTGGACCTCTCCAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592255.1
CDS-3UTR CAA 90 bp GACCGTGCGGAAGCCGTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTGCAGACTGGTCCTTaGACCCAGAAGCCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: DRAEAVEVPCRAGEGGGALQTGP*TQKPLP
Trigger: TGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCAG...AGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGACCATCGTTCACGCCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGTIVHA*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGGT...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp ACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGAGCCAGCCCAGGGACTaGCAGTCGGCCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: TPASLSCLQLLFSQPRDLSQPRD*QSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCT...CAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp GAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGCCAGCTTGTGAGGTTCAGGCCTTaGTACCGGGCCAGCAACTGG +
Preference number: 5 (lower is better)
Translates to: EACAVALQLPGPIGRGQLVRFRP*YRASNW
Trigger: CCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCAC...AAGCTGGCCTCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGACCGTGCGGAAGCCGTaGAAGTGCCCTGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRTVRKP*KCPAGQ
Trigger: CTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGT...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CTCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCACCGTGCGGAAGCCGTaGAAGTGCCCTGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: LREHHGEADLLHQALHLLTVRKP*KCPAGQ
Trigger: CTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGT...GAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GAAGCCCAGGGCGTCCTCGCCCTGCACATTCACGCTGATGGACAGGTCGCAGCCGGGGATACCTGGTGCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: EAQGVLALHIHADGQVAAGDTWC*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGCACCAGGTATCCCC...GGCTGCGACCTGTCCATCAGCGTGAATGTGCAGGGCGAGGACGCCCTGGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR CAA 90 bp CACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTCGCCCCCGCTCACCATaGGTGCAGACCACACCAGCG +
Preference number: 5 (lower is better)
Translates to: HTSVSLVPAVALQPAQGLRPRSP*VQTTPA
Trigger: CGCTGGTGTGGTCTGCACCAATGGTGAGCGGGGGCG...AAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588899.1
ENST00000588990.5
CDS GCA 90 bp GGTGTGGGTGCTCCATTGGTGCAGACCACACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: GVGAPLVQTTPASLS*LQLLFSQPRDLQSA
Trigger: GGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGAGCACCCACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592255.1
CDS CCA 90 bp AGTCCCACAGCGCGACTCAGCCCTTTGTTCTCCGCCCCGGCCGTGTaGGTCCATCTGCTTACAGGTCCTTCACCAGCGAACCACGGAGGA +
Preference number: 5 (lower is better)
Translates to: SPTARLSPLFSAPAV*VHLLTGPSPANHGG
Trigger: TCCTCCGTGGTTCGCTGGTGAAGGACCTGTAAGCAGATGGACCCACACGGCCGGGGCGGAGAACAAAGGGCTGAGTCGCGCTGTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS CCA 90 bp TTCCTGCAACCAGCAGCCACACCCAGAAGAGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAGATCCTGGTCTGCAGTGTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: FLQPAATPRRASEGS*PCLDAQILVCSVVL
Trigger: CAGGACCACACTGCAGACCAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGCTGCTGGTTGCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591274.1
CDS CCA 90 bp GGCGAAACCCTGTCTCTACTGGCTGCGGTAGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGCCACAGGATCCCTCTGCAGACTGGT +
Preference number: 5 (lower is better)
Translates to: GETLSLLAAVAATAV*SLLASSHRIPLQTG
Trigger: ACCAGTCTGCAGAGGGATCCTGTGGCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGCTACCGCAGCCAGTAGAGACAGGGTTTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589775.6
CDS CCA 90 bp TTCCTGCAACCAGCAGCCACACCCAGAAGAGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAGATCCTGTGTAGAGAGAGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: FLQPAATPRRASEGS*PCLDAQILCRERGA
Trigger: GGCACCCCTCTCTCTACACAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGCTGCTGGTTGCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589775.6
CDS-3UTR CAA 90 bp CAGGTTGGCAGTCAGGATGACCGTGTGGCCACAGAAGCCCAGGGCGTCCTCGCCACCATCGTTCACGCCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: QVGSQDDRVATEAQGVLATIVHA*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGGT...GGCGAGGACGCCCTGGGCTTCTGTGGCCACACGGTCATCCTGACTGCCAACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CAA 90 bp GTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGATCTTTCCACGCGGCCCTGGTaGGTGGCGCCCCCATCGGCC +
Preference number: 5 (lower is better)
Translates to: VELQLKELLREHHGEADLSTRPW*VAPPSA
Trigger: GGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGA...AAGATCCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGACTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: DGKEACAVALQLPGPIGRLSCLQ*LFSQPR
Trigger: CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAG...TCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587251.5
ENST00000588198.5
CDS-3UTR CAA 90 bp ACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TTPASLSCLQLLFSQPRDLSCLQ*LFSQPR
Trigger: CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAG...GTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587310.5
ENST00000588205.5
ENST00000588899.1
ENST00000588990.5
CDS-3UTR CAA 90 bp GCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCTCCCTGGAACACTCATGGTGACATaGCTGCCCGGCTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: AAPLAVKDLAKGLRELPGTLMVT*LPGSFH
Trigger: GTGGAAGGAGCCGGGCAGCAATGTCACCATGAGTGT...TCCAGGGAGCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587310.5
ENST00000588198.5
CDS-3UTR CAA 90 bp GCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTCCACGACCAGGACACCCTCTaGTCCTGGAAGAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ASWGSPVLTTLGPRRLVHDQDTL*SWKRKL
Trigger: CAGCTTCCTCTTCCAGGACAAGAGGGTGTCCTGGTC...GTGGACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTCTGAGCCGCCAGACTaGGTGAGGCCCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: RASNWKGTVWNSRACRVFSEPPD*VRPRTG
Trigger: CCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGA...GAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS GCA 90 bp CTCCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: LHWCRPHQRLSRACS*SSASPGTCSRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588198.5
ENST00000588587.5
ENST00000592255.1
CDS GCA 90 bp TGGGTGCTCCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: WVLHWCRPHQRLSRA*SCSSASPGTCSRPV
Trigger: CACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGAGCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592255.1
CDS GCA 90 bp GGAAGGCTCCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTaGAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GRLHWCRPHQRLSRA*SCSSASPGTCSRPV
Trigger: CACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGAGCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588198.5
ENST00000588587.5
CDS GCA 90 bp CTCTGGAAGGCTCCATTGGTGCAGACCACACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: LWKAPLVQTTPASLS*LQLLFSQPRDLQSA
Trigger: GGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGAGCCTTCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588198.5
ENST00000588587.5
CDS-3UTR CAA 90 bp GAGCTCCCTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: ELPGEVQGVGAPGFIGADLSCLQ*LFSQPR
Trigger: CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAG...GTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAGGGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587310.5
CDS-3UTR CAA 90 bp CCAGGACAGGGAGCTCGTCCGAGGAGCAGGAGAAGCCGTAGTTCCAGCAGCTCTGGATGGCAAAGAGGCTaGCGCAGTAGCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PGQGARPRSRRSRSSSSSGWQRG*RSSPAA
Trigger: AGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCC...AGAGCTGCTGGAACTACGGCTTCTCCTGCTCCTCGGACGAGCTCCCTGTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GATGGCAAAGAGGCTTGCGCAGTAGCCCTGCAGCTGCCTGGCCCCATAGGCAGAGGATGGCAAAGAGGCTaGCGCAGTAGCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: DGKEACAVALQLPGPIGRGWQRG*RSSPAA
Trigger: AGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCC...TCTGCCTATGGGGCCAGGCAGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CAA 90 bp TTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGGTGAGGTTCAGGCCTTaGTACCGGGCCAGCAACTGG +
Preference number: 5 (lower is better)
Translates to: LKCPAGQGKEEVLFELLVVRFRP*YRASNW
Trigger: CCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCAC...CACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp ACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCCAGTAACCGTGCGGAAGCCGTaGAAGTGCCCTGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: TGEVVGELLVDPSGSLPVTVRKP*KCPAGQ
Trigger: CTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGT...TACTGGAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCACCGTGCGGAAGCCGTaGAAGTGCCCTGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFTVRKP*KCPAGQ
Trigger: CTGCCCGGCAGGGCACTTCAACGGCTTCCGCACGGT...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CGATCTGAGCCGCCAGACTTGGTGAGGCCCAGGACAGGGAGCTCGTCCGAGGAGTCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: RSEPPDLVRPRTGSSSEESGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...CTCCTCGGACGAGCTCCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GACACTGGGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAATCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: DTGPGLGLRQGLEVPGQESGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...TTCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGTCTAGTTCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: EGVLGFSGSHHPWATPSSSGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...ACTAGACGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GGACACTGGGCCAGGCCTCGGCCTGCGTCAAGGCCTCGAAGTTCCAGGCCAGGAACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAG +
Preference number: 5 (lower is better)
Translates to: GHWARPRPASRPRSSRPGTSGGR*LKVIAE
Trigger: CTCTGCAATGACCTTCAACAACCGGCCACCAGATGT...TCCTGGCCTGGAACTTCGAGGCCTTGACGCAGGCCGAGGCCTGGCCCAGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GGGGAGCCTGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAG +
Preference number: 5 (lower is better)
Translates to: GEPAVRASWGSPVLTTLGTSGGR*LKVIAE
Trigger: CTCTGCAATGACCTTCAACAACCGGCCACCAGATGT...CCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCAGGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CACACTGGGGCCTCCGCAGGGAGGTGCGCCCCCGCTCACCATTGGTGCAGACCATCCACACTTCTGCTTTaGGTATTTCCCAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: HTGASAGRCAPAHHWCRPSTLLL*VFPRGS
Trigger: TGAGCCCCTGGGAAATACCAAAAGCAGAAGTGTGGA...TGGTCTGCACCAATGGTGAGCGGGGGCGCACCTCCCTGCGGAGGCCCCAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588899.1
CDS-3UTR CAA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCAGCCAGCCCAGGGACTaGCAGTCGGCCAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: HLETGEVVGELLVDPSGSSQPRD*QSASEA
Trigger: TGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCT...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS GCA 90 bp TACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: YHWCRPHQRLSRACS*SSASPGTCSRPVRP
Trigger: AGGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS GCA 90 bp CGCGACTCAGCCCTTTGTTCTCCGCCCCGGCCGTGTGGGTCCATCTaGTTACAGGTCCTTCACCAGCGAACCACGGAGGATATTCCAGCA +
Preference number: 5 (lower is better)
Translates to: RDSALCSPPRPCGSI*LQVLHQRTTEDIPA
Trigger: TGCTGGAATATCCTCCGTGGTTCGCTGGTGAAGGACCTGTAAGCAGATGGACCCACACGGCCGGGGCGGAGAACAAAGGGCTGAGTCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS CCA 90 bp CGTGTGGAGCCTCCTCGCTTCCAGCCACAGGATCCCTCTGCAGACTaGTCCTTTGACCCAGAAGCCTCTCCCAGTATGGAGCGTGGTCAG +
Preference number: 5 (lower is better)
Translates to: RVEPPRFQPQDPSAD*SFDPEASPSMERGQ
Trigger: CTGACCACGCTCCATACTGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCAGAGGGATCCTGTGGCTGGAAGCGAGGAGGCTCCACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS-3UTR CAA 90 bp GAAATCGGTGACGTCTGCCACGAAGAGCCCTTCGCAGAGCATCAGGGCTTTGTTAGCCAGCCCAGGGACTaGCAGTCGGCCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: EIGDVCHEEPFAEHQGFVSQPRD*QSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCT...AACAAAGCCCTGATGCTCTGCGAAGGGCTCTTCGTGGCAGACGTCACCGATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS-3UTR CAA 90 bp CAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGTGCTCCTGGTTTCATaGGTGCAGACCACACCAGCG +
Preference number: 5 (lower is better)
Translates to: QTTPASLSCLQLLFSQPRVLLVS*VQTTPA
Trigger: CGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCAC...CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CAA 90 bp GCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 5 (lower is better)
Translates to: AYHLETGEVVGELLVDPSAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...ACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GACAGGTTGAACTGCAGCTCAAAGAGCTCCTCAGGGAGCATCATGGGGAAGCGGGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 5 (lower is better)
Translates to: DRLNCSSKSSSGSIMGKRAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...CCGCTTCCCCATGATGCTCCCTGAGGAGCTCTTTGAGCTGCAGTTCAACCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTGTGGCAGTACAGGGACAGGTaGAACTGCAGCTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: GSFHRAWASRLAVRMTVWQYRDR*NCSSKS
Trigger: GCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTG...CCACACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp TTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGGACCAGGACACCCTCTaGTCCTGGAAGAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LKCPAGQGKEEVLFELLVDQDTL*SWKRKL
Trigger: CAGCTTCCTCTTCCAGGACAAGAGGGTGTCCTGGTC...CACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCTCTGAGCCGCCAGACTaGGTGAGGCCCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFSEPPD*VRPRTG
Trigger: CCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGA...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TCCCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGGTGCTCTTCGAGCTGTaGGTGTCCAGGGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: SQSNLEGVLVLTTWKLVRVLFEL*VSRALG
Trigger: TCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCAC...CCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CCAGAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGCTCTTCGAGCTGTaGGTGTCCAGGGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: PEQPRGRPGAYHLETGEVVLFEL*VSRALG
Trigger: TCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCAC...CACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GCCCGGCTCCTTCCACAGGGCCTGGGCCTCCAGGTTGGCAGTCAGGATGACCGTCCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: ARLLPQGLGLQVGSQDDRPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...ACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGCCCTGTGGAAGGAGCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS GCA 90 bp GGAGTAGAAGTACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: GVEVPLVQTTPASLS*LQLLFSQPRDLQSA
Trigger: GGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTACTTCTACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS GCA 90 bp TTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTaGTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: FHWCRPHQRLSRACS*SSASPGTCSRPVRQ
Trigger: CTGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS-3UTR CAA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAAACCATCGTTCACGCCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: PRGRPGAYHLETGEVVGETIVHA*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGGT...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp AGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCACTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SAQVSRATSGGRLLKVIALSCLQ*LFSQPR
Trigger: CCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAG...TGCAATGACCTTCAACAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GAGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGTGCTCCTGGTTTCATaGGTGCAGACCACACCAGCG +
Preference number: 5 (lower is better)
Translates to: EQPRGRPGAYHLETGEVVVLLVS*VQTTPA
Trigger: CGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCAC...CACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262776.8
ENST00000587251.5
CDS-3UTR CAA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGGCCTGGGCCTCCAGGTaGGCAGTCAGGATGACCGTG +
Preference number: 5 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRAWASR*AVRMTV
Trigger: CACGGTCATCCTGACTGCCAACCTGGAGGCCCAGGC...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAAACACTCATGGTGACATaGCTGCCCGGCTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: PRGRPGAYHLETGEVVGETLMVT*LPGSFH
Trigger: GTGGAAGGAGCCGGGCAGCAATGTCACCATGAGTGT...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp AGCAACCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGACACTCATGGTGACATaGCTGCCCGGCTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: SNLEGVLVLTTWKLVRWWTLMVT*LPGSFH
Trigger: GTGGAAGGAGCCGGGCAGCAATGTCACCATGAGTGT...CCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp CTGGAACGAGGGGTCCTGGGGGAGGAGGATGGCAAAGAGGCTTGCGCAGTAGCCAGCTTGTGGAAGCACTaGACTGACGACAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: LERGVLGEEDGKEACAVASLWKH*TDDRVM
Trigger: CATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCT...GGCTACTGCGCAAGCCTCTTTGCCATCCTCCTCCCCCAGGACCCCTCGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CAA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGGTGAGGTTCAGGCCTTaGTACCGGGCCAGCAACTGG +
Preference number: 5 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWVRFRP*YRASNW
Trigger: CCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCAC...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TCAGGGAGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCAGTGAGGTTCAGGCCTTaGTACCGGGCCAGCAACTGG +
Preference number: 5 (lower is better)
Translates to: SGSIMGKRIFSTKPSTSSVRFRP*YRASNW
Trigger: CCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCAC...TGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TGTACCGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGGACCAGGACACCCTCTaGTCCTGGAAGAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: CTGPATGRAQCGIPGPAEDQDTL*SWKRKL
Trigger: CAGCTTCCTCTTCCAGGACAAGAGGGTGTCCTGGTC...CTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGGACCAGGACACCCTCTaGTCCTGGAAGAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GVLVLTTWKLVRWWENSWDQDTL*SWKRKL
Trigger: CAGCTTCCTCTTCCAGGACAAGAGGGTGTCCTGGTC...CCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp AATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTTGTCTGAGCCGCCAGACTaGGTGAGGCCCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: NFLKLSAQVSRATSGGRLSEPPD*VRPRTG
Trigger: CCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGA...CAACCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCGGGGCTCAGCTCACCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLVQTTPASLSCLQLLFSGAQLT*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGGTGAGCTGAGCCCC...GCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588205.5
CDS-3UTR CAA 90 bp AGCATCATGGGGAAGCGGATCTTCTCCACCAAGCCCTCCACCTCCTCATGGGAGGTGCTCCTGGTTTCATaGGTGCAGACCACACCAGCG +
Preference number: 5 (lower is better)
Translates to: SIMGKRIFSTKPSTSSWEVLLVS*VQTTPA
Trigger: CGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCAC...CTCCCATGAGGAGGTGGAGGGCTTGGTGGAGAAGATCCGCTTCCCCATGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS-3UTR CAA 90 bp CTGGAGAGGTCCAGGGTGTGGGTGCTCCTGGTTTCATTGGTGCAGACCACACCAGTGCTCCTGGTTTCATaGGTGCAGACCACACCAGCG +
Preference number: 5 (lower is better)
Translates to: LERSRVWVLLVSLVQTTPVLLVS*VQTTPA
Trigger: CGCTGGTGTGGTCTGCACCAATGAAACCAGGAGCAC...TGGTGTGGTCTGCACCAATGAAACCAGGAGCACCCACACCCTGGACCTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588205.5
CDS-3UTR CAA 90 bp TCCAGGGCACTGGGAATCGCAGCCTTCCAGCCCTCGAAATCGGTGACGTCTGCCAGCTTGTGGAAGCACTaGACTGACGACAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: SRALGIAAFQPSKSVTSASLWKH*TDDRVM
Trigger: CATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCT...GGCAGACGTCACCGATTTCGAGGGCTGGAAGGCTGCGATTCCCAGTGCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTGAGCTTGTGGAAGCACTaGACTGACGACAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: LKCPAGQGKEEVLFELLVSLWKH*TDDRVM
Trigger: CATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCT...CACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTGAGGTTCAGGCCTTTGTGAGGTTCAGGCCTTaGTACCGGGCCAGCAACTGG +
Preference number: 5 (lower is better)
Translates to: GRGVNPGLVGILGEVQAFVRFRP*YRASNW
Trigger: CCAGTTGCTGGCCCGGTACAAAGGCCTGAACCTCAC...AAAGGCCTGAACCTCACCGAGGATACCTACAAGCCCCGGATTTACACCTCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TGCAGTGAGGGCGTCCTGGGGTTCTCCGGTTCTCACCACCCTTGGGCCACGCCGGTAGTCAGAGGGGGCTaGGAAGTAATCAGAAGAATA +
Preference number: 5 (lower is better)
Translates to: CSEGVLGFSGSHHPWATPVVRGG*EVIRRI
Trigger: TATTCTTCTGATTACTTCCAAGCCCCCTCTGACTAC...CGGCGTGGCCCAAGGGTGGTGAGAACCGGAGAACCCCAGGACGCCCTCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GCAGAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTTCTGAGCCGCCAGACTaGGTGAGGCCCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: AEASLWKHLTDDRVMSILSEPPD*VRPRTG
Trigger: CCCTGTCCTGGGCCTCACCAAGTCTGGCGGCTCAGA...AAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GTTCAGGCCTTTGTACCGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGTGCTCTTCGAGCTGTaGGTGTCCAGGGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: VQAFVPGQQLEGHSVEFQVLFEL*VSRALG
Trigger: TCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCAC...CTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTACAAAGGCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: RASNWKGTVWNSRACRVFSGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...GAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTCTGCAGACTGGTCCTTaGACCCAGAAGCCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: AYHLETGEVVGELLVDPSLQTGP*TQKPLP
Trigger: TGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCAG...ACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp ACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAACTGCAGACTGGTCCTTaGACCCAGAAGCCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: TTWKLVRWWENSWWTLVELQTGP*TQKPLP
Trigger: TGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCAG...TTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GTTCAGGCCTTTGTACCGGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGACCATCGTTCACGCCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: VQAFVPGQQLEGHSVEFQTIVHA*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGGT...CTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCCGGTACAAAGGCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CCAGTTGTGACTTCCGTGCACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGGGATGGCAAAGAGGCTaGCGCAGTAGCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PVVTSVHSRNCLSQRHSRGWQRG*RSSPAA
Trigger: AGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCC...CCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTGCACGGAAGTCACAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GACAGGTCGCAGCCCCGCTGGCTGTCAAAGATCTGGCCAAGGGCCTCCGAGAGCGTAGTCAGAGGGGGCTaGGAAGTAATCAGAAGAATA +
Preference number: 5 (lower is better)
Translates to: DRSQPRWLSKIWPRASESVVRGG*EVIRRI
Trigger: TATTCTTCTGATTACTTCCAAGCCCCCTCTGACTAC...GCTCTCGGAGGCCCTTGGCCAGATCTTTGACAGCCAGCGGGGCTGCGACCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS-3UTR CAA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCGACCAGGACACCCTCTaGTCCTGGAAGAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFDQDTL*SWKRKL
Trigger: CAGCTTCCTCTTCCAGGACAAGAGGGTGTCCTGGTC...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAAACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAG +
Preference number: 5 (lower is better)
Translates to: PRGRPGAYHLETGEVVGETSGGR*LKVIAE
Trigger: CTCTGCAATGACCTTCAACAACCGGCCACCAGATGT...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TGGCCACTGCATAGGCATACAGGTCCAGGGGCATCTGGAACGAGGGGTCCTGGGCCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: WPLHRHTGPGASGTRGPGPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...CCCAGGACCCCTCGTTCCAGATGCCCCTGGACCTGTATGCCTATGCAGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GTTGAAGTGCCCTGCCGGGCAGGGGAAGGAGGAGGTGCTCTTCGAGCTGTTGGTCCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: VEVPCRAGEGGGALRAVGPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...ACCAACAGCTCGAAGAGCACCTCCTCCTTCCCCTGCCCGGCAGGGCACTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp AGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGCTGCTGCAGACTGGTCCTTaGACCCAGAAGCCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: RSLTMGTHSASTLMVTLLLQTGP*TQKPLP
Trigger: TGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCAG...CAGCAATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CAA 90 bp GGGCCAGCAACTGGAAGGGCACAGTGTGGAATTCCAGGGCCTGCAGAGTCTTCTAGCTTGTGGAAGCACTaGACTGACGACAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: GPATGRAQCGIPGPAESSSLWKH*TDDRVM
Trigger: CATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCT...AGAAGACTCTGCAGGCCCTGGAATTCCACACTGTGCCCTTCCAGTTGCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCGGATGGCAAAGAGGCTaGCGCAGTAGCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SSNFLKLSAQVSRATSGGGWQRG*RSSPAA
Trigger: AGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCC...GCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCAGTACAGGGACAGGTaGAACTGCAGCTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: HLETGEVVGELLVDPSGSQYRDR*NCSSKS
Trigger: GCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTG...GCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGCAGTACAGGGACAGGTaGAACTGCAGCTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: VLVLTTWKLVRWWENSWWQYRDR*NCSSKS
Trigger: GCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTG...CCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GAGAAGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTGTGCTCTTCGAGCTGTaGGTGTCCAGGGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: EKVPDHGHTLSIHTHGDIVLFEL*VSRALG
Trigger: TCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCAC...AATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp CCTCGAGGGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: PRGRPGAYHLETGEVVGEPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...TTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCCCTCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CACACCAGCGTCTCTCTCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTTCCACACTTCTGCTTTaGGTATTTCCCAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: HTSVSLVPAVALQPAQGLSTLLL*VFPRGS
Trigger: TGAGCCCCTGGGAAATACCAAAAGCAGAAGTGTGGA...AAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588205.5
ENST00000588899.1
CDS-3UTR CAA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGCCTGCACATTCACGCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRPAHSR*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGCGTGAATGTGCAGG...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586720.5
CDS TCA 90 bp CTGCCTGGCCCCATAGGCAGAGGCCAGCTTGTGGAAGCACTTGACTaGCGACAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCATTG +
Preference number: 5 (lower is better)
Translates to: LPGPIGRGQLVEALD*RQGDVNPSGVEVPL
Trigger: CAATGGTACTTCTACTCCCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTCTGCCTATGGGGCCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS TCA 90 bp TTCCCTAGTGTCCTCTCTATAACCTGCATCTCACCTGAACCCAGGTaGGCCCCCGGGAACCTCCAAGTCATCATCACTGGGGATACCTGG +
Preference number: 5 (lower is better)
Translates to: FPSVLSITCISPEPR*APGNLQVIITGDTW
Trigger: CCAGGTATCCCCAGTGATGATGACTTGGAGGTTCCCGGGGGCTCACCTGGGTTCAGGTGAGATGCAGGTTATAGAGAGGACACTAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586300.1
CDS-3UTR CAA 90 bp TCCAGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCACCATCGTTCACGCCTaGGGTTCCTGCAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: SSNFLKLSAQVSRATSGGTIVHA*GSCNQQ
Trigger: CTGCTGGTTGCAGGAACCCAAGGCGTGAACGATGGT...GCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262776.8
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GAGAAGGTCCCTGACCATGGGCACACACTCAGCATCCACACTCATGGTGACATTACACTCATGGTGACATaGCTGCCCGGCTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: EKVPDHGHTLSIHTHGDITLMVT*LPGSFH
Trigger: GTGGAAGGAGCCGGGCAGCAATGTCACCATGAGTGT...AATGTCACCATGAGTGTGGATGCTGAGTGTGTGCCCATGGTCAGGGACCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CAA 90 bp CTGGAAGGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCGGATGGCAAAGAGGCTaGCGCAGTAGCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LEGLVGVVSVVRGGLEVIGWQRG*RSSPAA
Trigger: AGCTGCAGGGCTACTGCGCAAGCCTCTTTGCCATCC...GATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCCTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGACAGTACAGGGACAGGTaGAACTGCAGCTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: YHLETGEVVGELLVDPSGQYRDR*NCSSKS
Trigger: GCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTG...TCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp CAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACCATGTGCTCTTCGAGCTGTaGGTGTCCAGGGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: QGDVNPSGVEVPEKVPDHVLFEL*VSRALG
Trigger: TCCCAGTGCCCTGGACACCAACAGCTCGAAGAGCAC...ATGGTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGTCTGGTGGCCGGTTGTaGAAGGTCATTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRSGGRL*KVIAER
Trigger: CCTCTCTGCAATGACCTTCAACAACCGGCCACCAGA...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp TGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGTGGACCCTAGTGGAAGCCTTCACATCTGGTGGCCGGTaGTTGAAGGTCATTGCAGAG +
Preference number: 5 (lower is better)
Translates to: WKLVRWWENSWWTLVEAFTSGGR*LKVIAE
Trigger: CTCTGCAATGACCTTCAACAACCGGCCACCAGATGT...GAAGGCTTCCACTAGGGTCCACCAGGAGTTCTCCCACCACCTCACCAGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGAGCTTGTGGAAGCACTaGACTGACGACAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRSLWKH*TDDRVM
Trigger: CATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCT...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp GAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTCGGAGCTTGTGGAAGCACTaGACTGACGACAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: EASLWKHLTDDRVMSILRSLWKH*TDDRVM
Trigger: CATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCT...CCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000588198.5
CDS-3UTR CAA 90 bp GAGGCCAGCTTGTGGAAGCACTTGACTGACGACAGGGTGATGTCAATCCTTCGGCAGTACAGGGACAGGTaGAACTGCAGCTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: EASLWKHLTDDRVMSILRQYRDR*NCSSKS
Trigger: GCTCTTTGAGCTGCAGTTCAACCTGTCCCTGTACTG...CCGAAGGATTGACATCACCCTGTCGTCAGTCAAGTGCTTCCACAAGCTGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GGCGTCCTGGTGCTTACCACCTGGAAACTGGTGAGGTGGTGGGAGAACTCCTGGGTAGTCAGAGGGGGCTaGGAAGTAATCAGAAGAATA +
Preference number: 5 (lower is better)
Translates to: GVLVLTTWKLVRWWENSWVVRGG*EVIRRI
Trigger: TATTCTTCTGATTACTTCCAAGCCCCCTCTGACTAC...CCAGGAGTTCTCCCACCACCTCACCAGTTTCCAGGTGGTAAGCACCAGGACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS CCA 90 bp GCCACTCTCTGGGGTCAGTGTCTTCATCTGAAAGTGAGGGATTTGTaGCTGCCTCATTCACTCTGGAAGGCTCCATTGGTGCAGACCACA +
Preference number: 5 (lower is better)
Translates to: ATLWGQCLHLKVRDL*LPHSLWKAPLVQTT
Trigger: TGTGGTCTGCACCAATGGAGCCTTCCAGAGTGAATGAGGCAGCCACAAATCCCTCACTTTCAGATGAAGACACTGACCCCAGAGAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588198.5
ENST00000588587.5
CDS-3UTR CAA 90 bp CGACAGGGTGATGTCAATCCTTCGGGAGTAGAAGTACCTGAGAAGGTCCCTGACCCTTCCAGTAATTTCTaGAAGCTGAGCGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: RQGDVNPSGVEVPEKVPDPSSNF*KLSAQV
Trigger: CACCTGAGCGCTCAGCTTCAAGAAATTACTGGAAGG...GTCAGGGACCTTCTCAGGTACTTCTACTCCCGAAGGATTGACATCACCCTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
CDS-3UTR CAA 90 bp GGACTGGTAGGGGTAGTATCTGTAGTCAGAGGGGGCTTGGAAGTAATCAGAAGAGGAGTAGAAGTACCATaGGTGCAGACCACACCAGCG +
Preference number: 5 (lower is better)
Translates to: GLVGVVSVVRGGLEVIRRGVEVP*VQTTPA
Trigger: CGCTGGTGTGGTCTGCACCAATGGTACTTCTACTCC...TCTTCTGATTACTTCCAAGCCCCCTCTGACTACAGATACTACCCCTACCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS-3UTR CAA 90 bp CCAGTTGTGACTTCCGTGCACTCCAGGAACTGTCTGTCACAAAGGCACTCCAGGGTAGTCAGAGGGGGCTaGGAAGTAATCAGAAGAATA +
Preference number: 5 (lower is better)
Translates to: PVVTSVHSRNCLSQRHSRVVRGG*EVIRRI
Trigger: TATTCTTCTGATTACTTCCAAGCCCCCTCTGACTAC...CCTGGAGTGCCTTTGTGACAGACAGTTCCTGGAGTGCACGGAAGTCACAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS-3UTR CAA 90 bp AGTAATTTCTTGAAGCTGAGCGCTCAGGTGAGTAGGGCGACATCTGGTGGCCGGGTAGTCAGAGGGGGCTaGGAAGTAATCAGAAGAATA +
Preference number: 5 (lower is better)
Translates to: SNFLKLSAQVSRATSGGRVVRGG*EVIRRI
Trigger: TATTCTTCTGATTACTTCCAAGCCCCCTCTGACTAC...CCGGCCACCAGATGTCGCCCTACTCACCTGAGCGCTCAGCTTCAAGAAATTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262776.8
ENST00000586720.5
ENST00000587251.5
ENST00000587311.5
ENST00000591778.5
CDS CCA 72 bp GCCCTACCTTGCCCGAAGGCAGCTCTGCCCAGAGCCTaGGTGGCGTTCTCGAAGCCCAGGGCCCGGCAGACG +
Preference number: 6 (lower is better)
Translates to: ALPCPKAALPRA*VAFSKPRARQT
Trigger: CGTCTGCCGGGCCCTGGGCTTCGAGAACGCCACCCAGGCTCTGGGCAGAGCTGCCTTCGGGCAAGGTAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS GCA 72 bp GCCACACCCAGAAGAGCCTCGGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTGGGCTGTGTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: ATPRRASEGSWP*LDAQILGCVAG
Trigger: GCCTGCCACACAGCCCAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589527.5
CDS GCA 72 bp GCCACACCCAGAAGAGCCTCGGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTGGCTGCGGTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: ATPRRASEGSWP*LDAQILAAVAA
Trigger: TGCAGCTACCGCAGCCAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262776.8
ENST00000585407.5
ENST00000586300.1
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
ENST00000588899.1
ENST00000588990.5
ENST00000589906.5
ENST00000591778.5
CDS CCA 72 bp GCCCAGATCCTGGCTGCGGTAGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGCCACAGGATCCCTCTG +
Preference number: 6 (lower is better)
Translates to: AQILAAVAATAV*SLLASSHRIPL
Trigger: CAGAGGGATCCTGTGGCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGCTACCGCAGCCAGGATCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000262776.8
ENST00000585407.5
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
ENST00000588899.1
ENST00000588990.5
ENST00000589906.5
ENST00000591778.5
CDS CCA 72 bp CCAGCAGCCACACCCAGAAGAGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAGATCCTGGCTGCGGTA +
Preference number: 6 (lower is better)
Translates to: PAATPRRASEGS*PCLDAQILAAV
Trigger: TACCGCAGCCAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262776.8
ENST00000585407.5
ENST00000586300.1
ENST00000586720.5
ENST00000587251.5
ENST00000587310.5
ENST00000587311.5
ENST00000588198.5
ENST00000588899.1
ENST00000588990.5
ENST00000589906.5
ENST00000591778.5
CDS CCA 72 bp CCAGCAGCCACACCCAGAAGAGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAGATCCTGGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: PAATPRRASEGS*PCLDAQILGCV
Trigger: CACACAGCCCAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589527.5
CDS CAA 90 bp GGCGTGACGACTGCACCCAGGAGTCCCACAGCGCGACTCAGCCCTTaGTTCTCCGCCCCGGCCGTGTGGGTCCATCTGCTTACAGGTCCT +
Preference number: 6 (lower is better)
Translates to: GVTTAPRSPTARLSP*FSAPAVWVHLLTGP
Trigger: AGGACCTGTAAGCAGATGGACCCACACGGCCGGGGCGGAGAACAAAGGGCTGAGTCGCGCTGTGGGACTCCTGGGTGCAGTCGTCACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS GCA 72 bp GCCACACCCAGAAGAGCCTCGGAGGGGTCATGGCCGTaGCTGGATGCCCAGATCCTGGTCTGCAGTGTGGTC +
Preference number: 6 (lower is better)
Translates to: ATPRRASEGSWP*LDAQILVCSVV
Trigger: GACCACACTGCAGACCAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591274.1
CDS CCA 72 bp AAGGGCCTCTGTAGAAGATCTCCACGCGGCCCTGGTTaGTGGCGCCCCCATCGGCCAGCCGCATGTCACCAT +
Preference number: 6 (lower is better)
Translates to: KGLCRRSPRGPG*WRPHRPAACHH
Trigger: ATGGTGACATGCGGCTGGCCGATGGGGGCGCCACCAACCAGGGCCGCGTGGAGATCTTCTACAGAGGCCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587311.5
CDS CCA 72 bp CCAGCAGCCACACCCAGAAGAGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAGATCCTGGTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: PAATPRRASEGS*PCLDAQILVCS
Trigger: ACTGCAGACCAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGCTGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591274.1
CDS CCA 72 bp CACCCAGAAGAGCCTCGGAGGGGTCATGGCCGTGCCTaGATGCCCAGATCCTGTGTAGAGAGAGGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: HPEEPRRGHGRA*MPRSCVERGVP
Trigger: GGGCACCCCTCTCTCTACACAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589775.6
CDS CAA 72 bp ACTGCACCCAGGAGTCCCACAGCGCGACTCAGCCCTTaGTTCTCCGCCCCGGCCGTGTGGGTCCATCTGCTT +
Preference number: 6 (lower is better)
Translates to: TAPRSPTARLSP*FSAPAVWVHLL
Trigger: AAGCAGATGGACCCACACGGCCGGGGCGGAGAACAAAGGGCTGAGTCGCGCTGTGGGACTCCTGGGTGCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS CCA 72 bp GCGCGACTCAGCCCTTTGTTCTCCGCCCCGGCCGTGTaGGTCCATCTGCTTACAGGTCCTTCACCAGCGAAC +
Preference number: 6 (lower is better)
Translates to: ARLSPLFSAPAV*VHLLTGPSPAN
Trigger: GTTCGCTGGTGAAGGACCTGTAAGCAGATGGACCCACACGGCCGGGGCGGAGAACAAAGGGCTGAGTCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS CCA 72 bp CTGTCTCTACTGGCTGCGGTAGCTGCAACGGCCGTGTaGAGCCTCCTCGCTTCCAGCCACAGGATCCCTCTG +
Preference number: 6 (lower is better)
Translates to: LSLLAAVAATAV*SLLASSHRIPL
Trigger: CAGAGGGATCCTGTGGCTGGAAGCGAGGAGGCTCCACACGGCCGTTGCAGCTACCGCAGCCAGTAGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589775.6
CDS CCA 72 bp CCAGCAGCCACACCCAGAAGAGCCTCGGAGGGGTCATaGCCGTGCCTGGATGCCCAGATCCTGTGTAGAGAG +
Preference number: 6 (lower is better)
Translates to: PAATPRRASEGS*PCLDAQILCRE
Trigger: CTCTCTACACAGGATCTGGGCATCCAGGCACGGCCATGACCCCTCCGAGGCTCTTCTGGGTGTGGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589775.6
CDS CAA 72 bp TCGTGCCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTaGCAGTCGGCCAGTGAGGCAGCAGGCCCTACCTTG +
Preference number: 6 (lower is better)
Translates to: SCLQLLFSQPRD*QSASEAAGPTL
Trigger: CAAGGTAGGGCCTGCTGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS CAA 90 bp GCTCCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCC +
Preference number: 6 (lower is better)
Translates to: APLVQTTPASLSCLQ*LFSQPRDLQSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588198.5
ENST00000588587.5
ENST00000592255.1
CDS CAA 90 bp GTACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCC +
Preference number: 6 (lower is better)
Translates to: VPLVQTTPASLSCLQ*LFSQPRDLQSASEA
Trigger: GGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS GCA 72 bp GCCCTTTGTTCTCCGCCCCGGCCGTGTGGGTCCATCTaGTTACAGGTCCTTCACCAGCGAACCACGGAGGAT +
Preference number: 6 (lower is better)
Translates to: ALCSPPRPCGSI*LQVLHQRTTED
Trigger: ATCCTCCGTGGTTCGCTGGTGAAGGACCTGTAAGCAGATGGACCCACACGGCCGGGGCGGAGAACAAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS TCA 72 bp AGGCCTCGGTTCCCGTGCACTGGACCTCATCCAGCATaGTGGGGCCTGATCCTGTGGACACAGCAGATGGCA +
Preference number: 6 (lower is better)
Translates to: RPRFPCTGPHPA*WGLILWTQQMA
Trigger: TGCCATCTGCTGTGTCCACAGGATCAGGCCCCATCATGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588508.1
CDS TCA 72 bp AGGCCTCGGTTCCCGTGCACTGGACCTCATCCAGCATaGTGGGGCCTGATCCTTGGGTTCCTGCAACCAGCA +
Preference number: 6 (lower is better)
Translates to: RPRFPCTGPHPA*WGLILGFLQPA
Trigger: TGCTGGTTGCAGGAACCCAAGGATCAGGCCCCATCATGCTGGATGAGGTCCAGTGCACGGGAACCGAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589906.5
CDS GCA 72 bp GCTCCATTGGTGCAGACCACACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTG +
Preference number: 6 (lower is better)
Translates to: APLVQTTPASLS*LQLLFSQPRDL
Trigger: CAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588198.5
ENST00000588587.5
ENST00000592255.1
CDS CAA 72 bp GCCACTGACCTCACAACGGCCCCTGTGACTGCTGGTTaGATCAGCCCCTCTGGTTCCCTCTGGACGGAATGG +
Preference number: 6 (lower is better)
Translates to: ATDLTTAPVTAG*ISPSGSLWTEW
Trigger: CCATTCCGTCCAGAGGGAACCAGAGGGGCTGATCAAACCAGCAGTCACAGGGGCCGTTGTGAGGTCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586300.1
CDS CAA 90 bp GTTTCATTGGTGCAGACCACACCAGCGTCTCTCTCGTGCCTGCAGTaGCTCTTCAGCCAGCCCAGGGACTTGCAGTCGGCCAGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: VSLVQTTPASLSCLQ*LFSQPRDLQSASEA
Trigger: TGCCTCACTGGCCGACTGCAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587251.5
CDS CAA 90 bp AGCCTCCTCGCTTCCAGCCACAGGATCCCTCTGCAGACTGGTCCTTaGACCCAGAAGCCTCTCCCAGTATGGAGCGTGGTCAGGCTGATC +
Preference number: 6 (lower is better)
Translates to: SLLASSHRIPLQTGP*TQKPLPVWSVVRLI
Trigger: GATCAGCCTGACCACGCTCCATACTGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCAGAGGGATCCTGTGGCTGGAAGCGAGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588198.5
CDS GCA 72 bp GTACCATTGGTGCAGACCACACCAGCGTCTCTCTCGTaGCTGCAGTTGCTCTTCAGCCAGCCCAGGGACTTG +
Preference number: 6 (lower is better)
Translates to: VPLVQTTPASLS*LQLLFSQPRDL
Trigger: CAAGTCCCTGGGCTGGCTGAAGAGCAACTGCAGGCACGAGAGAGACGCTGGTGTGGTCTGCACCAATGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591778.5
CDS CCA 72 bp CCTCCTCGCTTCCAGCCACAGGATCCCTCTGCAGACTaGTCCTTTGACCCAGAAGCCTCTCCCAGTATGGAG +
Preference number: 6 (lower is better)
Translates to: PPRFQPQDPSAD*SFDPEASPSME
Trigger: CTCCATACTGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCAGAGGGATCCTGTGGCTGGAAGCGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585407.5
ENST00000588198.5
ENST00000588990.5
CDS CCA 72 bp CAGGTGAGCCCCCGGGAACCTCCAAGTCATCATCACTaGGGATACCTGGTGCTTGGGTTCCTGCAACCAGCA +
Preference number: 6 (lower is better)
Translates to: QVSPREPPSHHH*GYLVLGFLQPA
Trigger: TGCTGGTTGCAGGAACCCAAGCACCAGGTATCCCCAGTGATGATGACTTGGAGGTTCCCGGGGGCTCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587310.5
ENST00000588990.5
CDS CAA 72 bp GCTTCCAGCCACAGGATCCCTCTGCAGACTGGTCCTTaGACCCAGAAGCCTCTCCCAGTATGGAGCGTGGTC +
Preference number: 6 (lower is better)
Translates to: ASSHRIPLQTGP*TQKPLPVWSVV
Trigger: GACCACGCTCCATACTGGGAGAGGCTTCTGGGTCAAAGGACCAGTCTGCAGAGGGATCCTGTGGCTGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585407.5
ENST00000588198.5
CDS CAA 90 bp CTTCCACACTTCTGCTTTTGGTATTTCCCAGGGGCTCAGCTCACCTaGGGTTCCTGCAACCAGCAGCCACACCCAGAAGAGCCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: LPHFCFWYFPGAQLT*GSCNQQPHPEEPRR
Trigger: CCTCCGAGGCTCTTCTGGGTGTGGCTGCTGGTTGCAGGAACCCAAGGTGAGCTGAGCCCCTGGGAAATACCAAAAGCAGAAGTGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586300.1
ENST00000588205.5
ENST00000588899.1
CDS CCA 72 bp AACGGCCCCTGTGACTGCTGGTTTGATCAGCCCCTCTaGTTCCCTCTGGACGGAATGGAGGATTCCCTAGTG +
Preference number: 6 (lower is better)
Translates to: NGPCDCWFDQPL*FPLDGMEDSLV
Trigger: CACTAGGGAATCCTCCATTCCGTCCAGAGGGAACCAGAGGGGCTGATCAAACCAGCAGTCACAGGGGCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586300.1
CDS CAA 72 bp AGCCCCAGGGTGCACCAGCCTTCCACACTTCTGCTTTaGGTATTTCCCAGGGGCTCAGCTCACCTTGGGTTC +
Preference number: 6 (lower is better)
Translates to: SPRVHQPSTLLL*VFPRGSAHLGF
Trigger: GAACCCAAGGTGAGCTGAGCCCCTGGGAAATACCAAAAGCAGAAGTGTGGAAGGCTGGTGCACCCTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586300.1
ENST00000588205.5
ENST00000588899.1
CDS TCA 72 bp GTCCTCTCTATAACCTGCATCTCACCTGAACCCAGGTaGGCCCCCGGGAACCTCCAAGTCATCATCACTGGG +
Preference number: 6 (lower is better)
Translates to: VLSITCISPEPR*APGNLQVIITG
Trigger: CCCAGTGATGATGACTTGGAGGTTCCCGGGGGCTCACCTGGGTTCAGGTGAGATGCAGGTTATAGAGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586300.1
CDS CCA 72 bp CAGGTGAGCCCCCGGGAACCTCCAAGTCATCATCACTaGGGATACCTGGTGCTTCAAGCAGGAGAGAAGATC +
Preference number: 6 (lower is better)
Translates to: QVSPREPPSHHH*GYLVLQAGEKI
Trigger: GATCTTCTCTCCTGCTTGAAGCACCAGGTATCCCCAGTGATGATGACTTGGAGGTTCCCGGGGGCTCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586300.1
CDS CAA 72 bp TTCTGCTTTTGGTATTTCCCAGGGGCTCAGCTCACCTaGGGTTCCTGCAACCAGCAGCCACACCCAGAAGAG +
Preference number: 6 (lower is better)
Translates to: FCFWYFPGAQLT*GSCNQQPHPEE
Trigger: CTCTTCTGGGTGTGGCTGCTGGTTGCAGGAACCCAAGGTGAGCTGAGCCCCTGGGAAATACCAAAAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586300.1
ENST00000588205.5
ENST00000588899.1
CDS CAA 90 bp ACTGCCACTCTCTGGGGTCAGTGTCTTCATCTGAAAGTGAGGGATTaGTGGCTGCCTCATTCACTCTGGAAGGCTCCATTGGTGCAGACC +
Preference number: 6 (lower is better)
Translates to: TATLWGQCLHLKVRD*WLPHSLWKAPLVQT
Trigger: GGTCTGCACCAATGGAGCCTTCCAGAGTGAATGAGGCAGCCACAAATCCCTCACTTTCAGATGAAGACACTGACCCCAGAGAGTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588198.5
ENST00000588587.5
CDS CCA 72 bp TGGGGTCAGTGTCTTCATCTGAAAGTGAGGGATTTGTaGCTGCCTCATTCACTCTGGAAGGCTCCATTGGTG +
Preference number: 6 (lower is better)
Translates to: WGQCLHLKVRDL*LPHSLWKAPLV
Trigger: CACCAATGGAGCCTTCCAGAGTGAATGAGGCAGCCACAAATCCCTCACTTTCAGATGAAGACACTGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588198.5
ENST00000588587.5