Pregenerated sensors for LGALS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000100097Ensembl transcript IDs: ENST00000215909.10, ENST00000425542.5, ENST00000454173.1, ENST00000464120.1, ENST00000472321.1, ENST00000480207.5, ENST00000489315.5
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTaGAGGCACAGGTTGTTGCTGTCTTTGCCCAGGTTCAGCACGAAG | + |
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Preference number: 1 (lower is better) Translates to: TMVLASPWALKRGLK*RHRLLLSLPRFSTK Trigger: CTTCGTGCTGAACCTGGGCAAAGACAGCAACAACCTGTGCCTGCACTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR CCA 90 bp | GGCCTCCAGGTTGAGGCGGTTGGGGAACTTGAATTCGTATCCATCTaGCAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGATGCACAC | + |
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Preference number: 1 (lower is better) Translates to: GLQVEAVGELEFVSI*QLDGQVGLVEGDAH Trigger: GTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCGCCTCAACCTGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR CAA 90 bp | ACAGCCTCCCGCTGCTCGGTCCCCCAGGCCCCGCCGTCCTTGCTGTaGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TASRCSVPQAPPSLL*HTMVLASPWALKRG Trigger: CCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGACCGAGCAGCGGGAGGCTGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| 3UTR CAA 90 bp | GGAAAGACAGCCTCCCGCTGCTCGGTCCCCCAGGCCCCGCCGTCCTaGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GKTASRCSVPQAPPS*LLHTMVLASPWALK Trigger: CTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGACCGAGCAGCGGGAGGCTGTCTTTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| 3UTR CAA 90 bp | TCGGTCCCCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTaGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTGCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SVPQAPPSLLLHTMV*ASPWALKRGLKCRH Trigger: GTGCCTGCACTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGACCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| 3UTR-3UTR GCA 90 bp | CGGTCCCCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCGGGAGCAGAGGCAGCTaGCTTTATTGGGGGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: RSPRPRRPCCCTRWCWRRGSRGS*LYWGPW Trigger: CCATGGCCCCCAATAAAGGCAGCTGCCTCTGCTCCC...GCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGACCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGCAGGCACAGGTTGTTaGTGTCTTTGCCCAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: PGPAVLAVAHDGVGVAVGAGTGC*CLCPGS Trigger: TGAACCTGGGCAAAGACAGCAACAACCTGTGCCTGC...GCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCCATGTAGTTGATGGCCTCCAGGTTGAGGCGGTTGGGGAACTTGAATTCAGGCCCCGCCGTCCTTaGTGTTGCACACGATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SCHVVDGLQVEAVGELEFRPRRP*CCTRWC Trigger: ACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCT...GAATTCAAGTTCCCCAACCGCCTCAACCTGGAGGCCATCAACTACATGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGAGGCAGCTGCCTTTATTGGGGGCCATGGGCTGGCTGATTTCAGTCAAAACGGTCAGGTTGGCCTaGTCGAAGGTGATGCACACC | + |
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Preference number: 2 (lower is better) Translates to: EQRQLPLLGAMGWLISVKTVRLA*SKVMHT Trigger: GGTGTGCATCACCTTCGACCAGGCCAACCTGACCGT...TTTGACTGAAATCAGCCAGCCCATGGCCCCCAATAAAGGCAGCTGCCTCTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR CAA 90 bp | AGGTTGAGGCGGTTGGGGAACTTGAATTCGTATCCATCTGGCAGCTaGACGGTCAGGTTGGCCTGGTCGAAGGTGATGCACACCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RLRRLGNLNSYPSGS*TVRLAWSKVMHTSA Trigger: TGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCGCCTCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCATGGGCTGGCTGATTTCAGTCAAAGGCCACACATTTGATCTTGAAGTCTGCTGTTGCACACGATaGTGTTGGCGTCGCCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GAMGWLISVKGHTFDLEVCCCTR*CWRRRG Trigger: CCCACGGCGACGCCAACACCATCGTGTGCAACAGCA...GACTTCAAGATCAAATGTGTGGCCTTTGACTGAAATCAGCCAGCCCATGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR CAA 90 bp | TTGGGGAACTTGAATTCGTATCCATCTGGCAGCTTGACGGTCAGGTaGGCCTGGTCGAAGGTGATGCACACCTCTGCAACACTTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LGNLNSYPSGSLTVR*AWSKVMHTSATLPG Trigger: GCCTGGAAGTGTTGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAAGTTCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCTTTATTGGGGGCCATGGGCTGGCTGATTTCAGTCAAAGGCCACACATTGCAACACTTCCAGGCTaGAAGGGAAAGACAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: AAFIGGHGLADFSQRPHIATLPG*KGKTAS Trigger: GGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTTGC...AATGTGTGGCCTTTGACTGAAATCAGCCAGCCCATGGCCCCCAATAAAGGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR-3UTR GCA 90 bp | TTGAATTCGTATCCATCTGGCAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGGGTTGTTGCTGTCTTTaGCCAGGTTCAGCACGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LNSYPSGSLTVRLAWSKVGCCCL*PGSARS Trigger: GCTTCGTGCTGAACCTGGGCAAAGACAGCAACAACC...CACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGGTTGAGGCGGTTGGGGAACTTGAATTCGTATCCATCTGGCAGCTTGACAAGCGAGGGTTGAAGTaGAGGCACAGGTTGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LQVEAVGELEFVSIWQLDKRGLK*RHRLLL Trigger: CAGCAACAACCTGTGCCTGCACTTCAACCCTCGCTT...GTCAAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCGCCTCAACCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR-3UTR CAA 90 bp | CAACACTTCCAGGCTGGAAGGGAAAGACAGCCTCCCGCTGCTCGGTCCCCCAGGGCGTCGCCGTGGGCGTaGAAGCGAGGGTTGAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: QHFQAGRERQPPAARSPRASPWA*KRGLKC Trigger: GCACTTCAACCCTCGCTTCAACGCCCACGGCGACGC...CCTGGGGGACCGAGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| 3UTR CCA 72 bp | TCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTaGGCGTTGAAGCGAGGGTTGAAGTGCAGGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: SLLLHTMVLASP*ALKRGLKCRHR Trigger: CCTGTGCCTGCACTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| 3UTR CCA 72 bp | TCGAAGGTGATGCACACCTCTGCAACACTTCCAGGCTaGAAGGGAAAGACAGCCTCCCGCTGCTCGGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: SKVMHTSATLPG*KGKTASRCSVP Trigger: GGGGACCGAGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTTGCAGAGGTGTGCATCACCTTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGGTTGAGGCGGTTGGGGAACTTGAATTCGTATCCATCTGGCAGCTTGACAGGCAGCTGCCTTTATaGGGGGCCATGGGCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LQVEAVGELEFVSIWQLDRQLPL*GAMGWL Trigger: CAGCCAGCCCATGGCCCCCAATAAAGGCAGCTGCCT...GTCAAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCGCCTCAACCTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR-3UTR CAA 90 bp | ACCGTCAGCTGCCATGTAGTTGATGGCCTCCAGGTTGAGGCGGTTGGGGAACTTAGCTTGACGGTCAGGTaGGCCTGGTCGAAGGTGATG | + |
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Preference number: 3 (lower is better) Translates to: TVSCHVVDGLQVEAVGELSLTVR*AWSKVM Trigger: CATCACCTTCGACCAGGCCAACCTGACCGTCAAGCT...AAGTTCCCCAACCGCCTCAACCTGGAGGCCATCAACTACATGGCAGCTGACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR CCA 72 bp | TCGTATCCATCTGGCAGCTTGACGGTCAGGTTGGCCTaGTCGAAGGTGATGCACACCTCTGCAACACTTCCA | + |
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Preference number: 3 (lower is better) Translates to: SYPSGSLTVRLA*SKVMHTSATLP Trigger: TGGAAGTGTTGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR CCA 72 bp | GTTGAGGCGGTTGGGGAACTTGAATTCGTATCCATCTaGCAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: VEAVGELEFVSI*QLDGQVGLVEG Trigger: ACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCGCCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| 3UTR TCA 72 bp | AGAGGCAGCTGCCTTTATTGGGGGCCATGGGCTGGCTaGTTTCAGTCAAAGGCCACACATTTGATCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: RGSCLYWGPWAG*FQSKATHLILK Trigger: CTTCAAGATCAAATGTGTGGCCTTTGACTGAAATCAGCCAGCCCATGGCCCCCAATAAAGGCAGCTGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR TCA 90 bp | CCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCCCGCCCGGCATCCTCTaGCCAAGCCAAGGGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGPAVLAVAHDGVGVAVGPPGIL*PSQGEA Trigger: TGCTTCCCCTTGGCTTGGTCAGAGGATGCCGGGCGG...GCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR GCA 90 bp | AACACTTCCAGGCTGGAAGGGAAAGACAGCCTCCCGCTGCTCGGTCCCCCAGGCAAGACAGCCTCCCGCTaGTCGGTCCCCCAGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: NTSRLEGKDSLPLLGPPGKTASR*SVPQAP Trigger: CGGGGCCTGGGGGACCGAGCAGCGGGAGGCTGTCTT...GCCTGGGGGACCGAGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR GCA 90 bp | CGGTCCCCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCAGGCCCCGCCGTCCTTaGTGTTGCACACGATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: RSPRPRRPCCCTRWCWRRRPRRP*CCTRWC Trigger: ACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCT...GCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGACCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR CCA 90 bp | CCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGTGCTGTTGCACACGATaGTGTTGGCGTCGCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PRPRRPCCCTRWCWRRRGCCCTR*CWRRRG Trigger: CCCACGGCGACGCCAACACCATCGTGTGCAACAGCA...CCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR GCA 90 bp | GCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGGGGAGCAGAGGCAGCTaGCTTTATTGGGGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: APPSLLLHTMVLASPWALGSRGS*LYWGPW Trigger: CCATGGCCCCCAATAAAGGCAGCTGCCTCTGCTCCC...CAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR CCA 90 bp | GGTCCCCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCACGGTCAGGTTGGCCTaGTCGAAGGTGATGCACACC | + |
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Preference number: 4 (lower is better) Translates to: GPPGPAVLAVAHDGVGVATVRLA*SKVMHT Trigger: GGTGTGCATCACCTTCGACCAGGCCAACCTGACCGT...GGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| 3UTR CAA 72 bp | CAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTaGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: QAPPSLLLHTMV*ASPWALKRGLK Trigger: CTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR GCA 90 bp | AACACTTCCAGGCTGGAAGGGAAAGACAGCCTCCCGCTGCTCGGTCCCCCAGGCGGACAAGGCCTCCACTaGTCGAAGTGTCCGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: NTSRLEGKDSLPLLGPPGGQGLH*SKCPGV Trigger: CACCCCCGGACACTTCGAGCAGTGGAGGCCTTGTCC...GCCTGGGGGACCGAGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR GCA 90 bp | TTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGCTGGCGACCAGACCCTaGACAGACAAGCCCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LLLHTMVLASPWALKRGLLATRP*TDKPRP Trigger: GGGCCGGGGCTTGTCTGTGCAGGGTCTGGTCGCCAG...CAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGGGTTGTTGCTGTCTTTaGCCAGGTTCAGCACGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PRPRRPCCCTRWCWRRRGGCCCL*PGSARS Trigger: GCTTCGTGCTGAACCTGGGCAAAGACAGCAACAACC...CCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGGCAGGCACAGGTTGTTaGTGTCTTTGCCCAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PRPRRPCCCTRWCWRRRGAGTGC*CLCPGS Trigger: TGAACCTGGGCAAAGACAGCAACAACCTGTGCCTGC...CCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR CCA 90 bp | CACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTGCAGGGTGTTGGCGTCGCCGTaGGCGTTGAAGCGAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: HTMVLASPWALKRGLKCRVLASP*ALKRGL Trigger: CAACCCTCGCTTCAACGCCCACGGCGACGCCAACAC...CCTGCACTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR TCA 90 bp | GCAACACTTCCAGGCTGGAAGGGAAAGACAGCCTCCCGCTGCTCGGTCCCCCAGGGGCCATGGGCTGGCTaGTTTCAGTCAAAGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: ATLPGWKGKTASRCSVPQGPWAG*FQSKAT Trigger: TGTGGCCTTTGACTGAAATCAGCCAGCCCATGGCCC...CTGGGGGACCGAGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR TCA 90 bp | CACTTCCAGGCTGGAAGGGAAAGACAGCCTCCCGCTGCTCGGTCCCCCAGGCCCAGCACAAGCCATGATTaGGTCCAGGAGGATGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: HFQAGRERQPPAARSPRPSTSHD*VQEDVP Trigger: GGGAACATCCTCCTGGACTCAATCATGGCTTGTGCT...GGGCCTGGGGGACCGAGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR GCA 90 bp | GGCCTCCAGGTTGAGGCGGTTGGGGAACTTGAATTCGTATCCATCTGGCAGCTTAAGACAGCCTCCCGCTaGTCGGTCCCCCAGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: GLQVEAVGELEFVSIWQLKTASR*SVPQAP Trigger: CGGGGCCTGGGGGACCGAGCAGCGGGAGGCTGTCTT...AAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCGCCTCAACCTGGAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR GCA 90 bp | GCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGGAAGTCACCGTCAGCTaGCATGTAGTTGATGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: APPSLLLHTMVLASPWALEVTVS*HVVDGL Trigger: GAGGCCATCAACTACATGGCAGCTGACGGTGACTTC...CAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR TCA 90 bp | CAACACTTCCAGGCTGGAAGGGAAAGACAGCCTCCCGCTGCTCGGTCCCCCAGGGGCACTCTCCAGGTTTaGGATTCAGGTTGCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: QHFQAGRERQPPAARSPRGTLQV*DSGCWR Trigger: TCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCC...CCTGGGGGACCGAGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR TCA 90 bp | CACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTGCAGGTGGCCTGGTCGAAGGTaGTGCACACCTCTGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: HTMVLASPWALKRGLKCRWPGRR*CTPLQH Trigger: GTGTTGCAGAGGTGTGCATCACCTTCGACCAGGCCA...CCTGCACTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR CCA 90 bp | GTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTGTGCTGTTGCACACGATaGTGTTGGCGTCGCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: VAHDGVGVAVGVEARVEVCCCTR*CWRRRG Trigger: CCCACGGCGACGCCAACACCATCGTGTGCAACAGCA...CACTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR TCA 90 bp | GATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTGCAGGCACAGGGCACTCTCCAGGTTTaGGATTCAGGTTGCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: DGVGVAVGVEARVEVQAQGTLQV*DSGCWR Trigger: TCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCC...CTGTGCCTGCACTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR TCA 90 bp | GTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTGTGGCCTGGTCGAAGGTaGTGCACACCTCTGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: VAHDGVGVAVGVEARVEVWPGRR*CTPLQH Trigger: GTGTTGCAGAGGTGTGCATCACCTTCGACCAGGCCA...CACTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR TCA 90 bp | TTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGATCCATCTGGCAGCTTaGCGGTCAGGTTGGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LLLHTMVLASPWALKRGLIHLAA*RSGWPG Trigger: ACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGAT...CAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR TCA 90 bp | AACACTTCCAGGCTGGAAGGGAAAGACAGCCTCCCGCTGCTCGGTCCCCCAGGCGGCGGTTGGGGAACTTaGATTCGTATCCATCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTSRLEGKDSLPLLGPPGGGWGT*IRIHLA Trigger: TGCCAGATGGATACGAATTCAAGTTCCCCAACCGCC...GCCTGGGGGACCGAGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR TCA 90 bp | GCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTGCAGGGGAAGCACAAGCCATaGTTGAGTCCAGGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AHDGVGVAVGVEARVEVQGKHKP*LSPGGC Trigger: ACATCCTCCTGGACTCAATCATGGCTTGTGCTTCCC...CTGCACTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR CCA 90 bp | TTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGGCAACACTTCCAGGCTaGAAGGGAAAGACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLHTMVLASPWALKRGLATLPG*KGKTAS Trigger: GGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTTGC...CAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
||
| CDS-3UTR GCA 90 bp | GCCTCCAGGTTGAGGCGGTTGGGGAACTTGAATTCGTATCCATCTGGCAGCTTGAGGCCCCGCCGTCCTTaGTGTTGCACACGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRLRRLGNLNSYPSGSLRPRRP*CCTRWC Trigger: ACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCT...CAAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCGCCTCAACCTGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR GCA 90 bp | TTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGGGTGATGCACACCTCTaGAACACTTCCAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLHTMVLASPWALKRGLGDAHL*NTSRLE Trigger: TTCCAGCCTGGAAGTGTTGCAGAGGTGTGCATCACC...CAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
||
| CDS-3UTR CCA 90 bp | GAATTCGTATCCATCTGGCAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGATGTGTTGGCGTCGCCGTaGGCGTTGAAGCGAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EFVSIWQLDGQVGLVEGDVLASP*ALKRGL Trigger: CAACCCTCGCTTCAACGCCCACGGCGACGCCAACAC...ATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR CCA 90 bp | CTTGACGGTCAGGTTGGCCTGGTCGAAGGTGATGCACACCTCTGCAACACTTCCACGGTCAGGTTGGCCTaGTCGAAGGTGATGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LDGQVGLVEGDAHLCNTSTVRLA*SKVMHT Trigger: GGTGTGCATCACCTTCGACCAGGCCAACCTGACCGT...GGAAGTGTTGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTCAGCACGAAGCTTGCTaGAAGAACTCACTCTTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LAVAHDGVGVAVGVEARVQHEAC*KNSLLA Trigger: CGCTAAGAGTGAGTTCTTCCAGCAAGCTTCGTGCTG...AACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454173.1 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGATGCACACCTCTGCAACACTGCAGGCACAGGTTGTTaGTGTCTTTGCCCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLDGQVGLVEGDAHLCNTAGTGC*CLCPGS Trigger: TGAACCTGGGCAAAGACAGCAACAACCTGTGCCTGC...AGTGTTGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| 3UTR CAA 72 bp | CGGTTGGGGAACTTGAATTCGTATCCATCTGGCAGCTaGACGGTCAGGTTGGCCTGGTCGAAGGTGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLGNLNSYPSGS*TVRLAWSKVMH Trigger: GTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR GCA 90 bp | CTTGAATTCGTATCCATCTGGCAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGGTTGTTGCTGTCTTTaGCCAGGTTCAGCACGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEFVSIWQLDGQVGLVEGGCCCL*PGSARS Trigger: GCTTCGTGCTGAACCTGGGCAAAGACAGCAACAACC...ACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR GCA 90 bp | TTGAATTCGTATCCATCTGGCAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGAAGCGAGGGTTGAAGTaGAGGCACAGGTTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNSYPSGSLTVRLAWSKVKRGLK*RHRLLL Trigger: CAGCAACAACCTGTGCCTGCACTTCAACCCTCGCTT...CACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR GCA 90 bp | CTTGAATTCGTATCCATCTGGCAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGGTGATGCACACCTCTaGAACACTTCCAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEFVSIWQLDGQVGLVEGGDAHL*NTSRLE Trigger: TTCCAGCCTGGAAGTGTTGCAGAGGTGTGCATCACC...ACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| 3UTR CAA 72 bp | TTGAATTCGTATCCATCTGGCAGCTTGACGGTCAGGTaGGCCTGGTCGAAGGTGATGCACACCTCTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LNSYPSGSLTVR*AWSKVMHTSAT Trigger: TGTTGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCCAGGTTGAGGCGGTTGGGGAACTTGAATTCGTATCCATCTGGCAGCTTGAATTCGTATCCATCTaGCAGCTTGACGGTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLQVEAVGELEFVSIWQLEFVSI*QLDGQV Trigger: AACCTGACCGTCAAGCTGCCAGATGGATACGAATTC...AAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCGCCTCAACCTGGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS CCA 90 bp | CGGCTGGCCGTTAACCCGCTCCCGGCCAGGGAGGAGATGTGGGCTTaGCCGGCCACGCCCTCCCTGCTGGACCAAGCCCGTCCCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RLAVNPLPAREEMWA*PATPSLLDQARPCR Trigger: GCGGCAGGGACGGGCTTGGTCCAGCAGGGAGGGCGTGGCCGGCCAAGCCCACATCTCCTCCCTGGCCGGGAGCGGGTTAACGGCCAGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464120.1 |
||
| CDS GCA 90 bp | TGGGCTTGGCCGGCCACGCCCTCCCTGCTGGACCAAGCCCGTCCCTaGCGCCCACCACCCCGACTTCACTTCTCACCTCTTAGCGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WAWPATPSLLDQARP*RPPPRLHFSPLSVR Trigger: CCTGACGCTAAGAGGTGAGAAGTGAAGTCGGGGTGGTGGGCGGCAGGGACGGGCTTGGTCCAGCAGGGAGGGCGTGGCCGGCCAAGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464120.1 |
||
| CDS-3UTR CAA 90 bp | GTCCCCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGGCGTCGCCGTGGGCGTaGAAGCGAGGGTTGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPQAPPSLLLHTMVLASPASPWA*KRGLKC Trigger: GCACTTCAACCCTCGCTTCAACGCCCACGGCGACGC...CGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
||
| CDS-3UTR CAA 90 bp | CCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCAGGCAGCTGCCTTTATaGGGGGCCATGGGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGPAVLAVAHDGVGVAVGRQLPL*GAMGWL Trigger: CAGCCAGCCCATGGCCCCCAATAAAGGCAGCTGCCT...GCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR CAA 90 bp | GCTCGGTCCCCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTTTGCACACGATGGTGTaGGCGTCGCCGTGGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARSPRPRRPCCCTRWCWRLHTMV*ASPWAL Trigger: CAACGCCCACGGCGACGCCAACACCATCGTGTGCAA...ACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGACCGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR CAA 90 bp | AACACTTCCAGGCTGGAAGGGAAAGACAGCCTCCCGCTGCTCGGTCCCCCAGGCCAGGCCCCGCCGTCCTaGCTGTTGCACACGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTSRLEGKDSLPLLGPPGQAPPS*LLHTMV Trigger: CACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTG...GCCTGGGGGACCGAGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR CAA 90 bp | CCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGGTTTGAGATTCAGGTaGCTGGCGACCAGACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPAVLAVAHDGVGVAVGGLRFR*LATRPC Trigger: GCAGGGTCTGGTCGCCAGCAACCTGAATCTCAAACC...GCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS CCA 90 bp | GCAGGCACAGGTTGTTGCTGTCTTTGCCCAGGTTCAGCACGAAGCTaGGGGGTAACGGGTGGGCATGAGGCCACCTCGGCCAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGTGCCCLCPGSARS*GVTGGHEATSASSS Trigger: GCTGGAGCTGGCCGAGGTGGCCTCATGCCCACCCGTTACCCCCCAGCTTCGTGCTGAACCTGGGCAAAGACAGCAACAACCTGTGCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472321.1 |
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| CDS-3UTR CAA 90 bp | GTCCCCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGAGGCACTCTCCAGGTTaGAGATTCAGGTTGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VPQAPPSLLLHTMVLASPRHSPG*RFRLLA Trigger: CGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCT...CGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR CAA 90 bp | TCTGGCAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGATGCACACCTCTGCAGGGGTGGGAGTGGGGTaGTTCCCGCCCGGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGSLTVRLAWSKVMHTSAGVGVG*FPPGIL Trigger: GAGGATGCCGGGCGGGAACAACCCCACTCCCACCCC...TGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR CAA 90 bp | TTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGCAGGCCCCGCCGTCCTaGCTGTTGCACACGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLHTMVLASPWALKRGLQAPPS*LLHTMV Trigger: CACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTG...CAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS GCA 90 bp | AGGCACTCTCCAGGTTTGAGATTCAGGTTGCTGGCGACCAGACCCTaGACAGACAAGCCCCGGCCCAGCCGGGTTAGAGGACAAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RHSPGLRFRLLATRP*TDKPRPSRVRGQGL Trigger: GAGGCCTTGTCCTCTAACCCGGCTGGGCCGGGGCTTGTCTGTGCAGGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR CAA 90 bp | GCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGGGTTTGAGATTCAGGTaGCTGGCGACCAGACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: APPSLLLHTMVLASPWALGLRFR*LATRPQ Trigger: TTGTGGTCTGGTCGCCAGCAACCTGAATCTCAAACC...CAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454173.1 |
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| CDS-3UTR CAA 90 bp | GCTCGGTCCCCCAGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTAGGCGGTTGGGGAACTaGAATTCGTATCCATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARSPRPRRPCCCTRWCWRRRLGN*NSYPSG Trigger: GCCAGATGGATACGAATTCAAGTTCCCCAACCGCCT...ACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCTGGGGGACCGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR CAA 90 bp | GCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGGCCACACATTTGATCTaGAAGTCACCGTCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: APPSLLLHTMVLASPWALATHLI*KSPSAA Trigger: GGCAGCTGACGGTGACTTCAAGATCAAATGTGTGGC...CAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR CAA 90 bp | AGGCCCCGCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTCCAGGTTGAGGCGGTaGGGGAACTTGAATTCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RPRRPCCCTRWCWRRRGRSRLRR*GNLNSY Trigger: ATACGAATTCAAGTTCCCCAACCGCCTCAACCTGGA...ACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGCGGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR CAA 90 bp | TTGACGGTCAGGTTGGCCTGGTCGAAGGTGATGCACACCTCTGCAACACTTCCAGCGTCGCCGTGGGCGTaGAAGCGAGGGTTGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTVRLAWSKVMHTSATLPASPWA*KRGLKC Trigger: GCACTTCAACCCTCGCTTCAACGCCCACGGCGACGC...TGGAAGTGTTGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR CAA 90 bp | CTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTTGATGGCCTCCAGGTaGAGGCGGTTGGGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLHTMVLASPWALKRGLKLMASR*RRLGNL Trigger: CAAGTTCCCCAACCGCCTCAACCTGGAGGCCATCAA...CTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS-3UTR CAA 90 bp | TTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAGGCACTCTCCAGGTTaGAGATTCAGGTTGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLLHTMVLASPWALKRGLRHSPG*RFRLLA Trigger: CGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCT...CAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425542.5 ENST00000454173.1 |
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| CDS-3UTR CAA 90 bp | GCCGTCCTTGCTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGGGTTCAGCACGAAGCTaGCTGGAAGAACTCACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVLAVAHDGVGVAVGVEAGSARS*LEELTL Trigger: AAGAGTGAGTTCTTCCAGCAAGCTTCGTGCTGAACC...CGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAGCAAGGACGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454173.1 |
||
| CDS-3UTR CAA 90 bp | TTGAGGCGGTTGGGGAACTTGAATTCGTATCCATCTGGCAGCTTGACGGTCAGGTTGCACACGATGGTGTaGGCGTCGCCGTGGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRRLGNLNSYPSGSLTVRLHTMV*ASPWAL Trigger: CAACGCCCACGGCGACGCCAACACCATCGTGTGCAA...CCTGACCGTCAAGCTGCCAGATGGATACGAATTCAAGTTCCCCAACCGCCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR CAA 90 bp | CAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGATGCACACCTCTGCAACACTTATCCATCTGGCAGCTaGACGGTCAGGTTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLDGQVGLVEGDAHLCNTYPSGS*TVRLAW Trigger: CCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATA...AGTGTTGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR CAA 90 bp | TTGAATTCGTATCCATCTGGCAGCTTGACGGTCAGGTTGGCCTGGTCGAAGGTGAGCTTGACGGTCAGGTaGGCCTGGTCGAAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LNSYPSGSLTVRLAWSKVSLTVR*AWSKVM Trigger: CATCACCTTCGACCAGGCCAACCTGACCGTCAAGCT...CACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS-3UTR CAA 90 bp | CTGTTGCACACGATGGTGTTGGCGTCGCCGTGGGCGTTGAAGCGAGGGTTGAAGTCAAAGGCCACACATTaGATCTTGAAGTCACCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLHTMVLASPWALKRGLKSKATH*ILKSPS Trigger: TGACGGTGACTTCAAGATCAAATGTGTGGCCTTTGA...CTTCAACCCTCGCTTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS CAA 90 bp | ACCTCGCCTCGCACTCGAAGGCACTCTCCAGGTTTGAGATTCAGGTaGCTGGCGACCAGACCCTGCACAGACAAGCCCCGGCCCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TSPRTRRHSPGLRFR*LATRPCTDKPRPSR Trigger: CCGGCTGGGCCGGGGCTTGTCTGTGCAGGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCTTCGAGTGCGAGGCGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS CCA 72 bp | GGAAGTGAGTCACCCAGAAAACGCAGCATCGGCGGCTaGCCGTTAACCCGCTCCCGGCCAGGGAGGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: GSESPRKRSIGG*PLTRSRPGRRC Trigger: ACATCTCCTCCCTGGCCGGGAGCGGGTTAACGGCCAGCCGCCGATGCTGCGTTTTCTGGGTGACTCACTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464120.1 |
||
| CDS CCA 72 bp | GGTTGTTGCTGTCTTTGCCCAGGTTCAGCACGAAGCTaGGGGGTAACGGGTGGGCATGAGGCCACCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GCCCLCPGSARS*GVTGGHEATSA Trigger: GGCCGAGGTGGCCTCATGCCCACCCGTTACCCCCCAGCTTCGTGCTGAACCTGGGCAAAGACAGCAACAACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472321.1 |
||
| CDS CAA 90 bp | GCGTCAGGAGCCACCTCGCCTCGCACTCGAAGGCACTCTCCAGGTTaGAGATTCAGGTTGCTGGCGACCAGACCCTGCACAGACAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASGATSPRTRRHSPG*RFRLLATRPCTDKP Trigger: GGGCTTGTCTGTGCAGGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCTTCGAGTGCGAGGCGAGGTGGCTCCTGACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS GCA 72 bp | CCAGGTTTGAGATTCAGGTTGCTGGCGACCAGACCCTaGACAGACAAGCCCCGGCCCAGCCGGGTTAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLRFRLLATRP*TDKPRPSRVRG Trigger: TCCTCTAACCCGGCTGGGCCGGGGCTTGTCTGTGCAGGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS TCA 72 bp | CCTCTGACCAAGCCAAGGGGAAGCACAAGCCATGATTaGGTCCAGGAGGATGTTCCCGGGCAGGCGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLTKPRGSTSHD*VQEDVPGQAHQ Trigger: CTGGTGCGCCTGCCCGGGAACATCCTCCTGGACTCAATCATGGCTTGTGCTTCCCCTTGGCTTGGTCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
||
| CDS CAA 72 bp | GCCACCTCGCCTCGCACTCGAAGGCACTCTCCAGGTTaGAGATTCAGGTTGCTGGCGACCAGACCACAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATSPRTRRHSPG*RFRLLATRPQA Trigger: GGCTTGTGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCTTCGAGTGCGAGGCGAGGTGGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000215909.10 ENST00000454173.1 ENST00000464120.1 ENST00000480207.5 |
||
| CDS CAA 72 bp | CGCACTCGAAGGCACTCTCCAGGTTTGAGATTCAGGTaGCTGGCGACCAGACCCTGCACAGACAAGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RTRRHSPGLRFR*LATRPCTDKPR Trigger: CCGGGGCTTGTCTGTGCAGGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCTTCGAGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS CAA 72 bp | GCCACCTCGCCTCGCACTCGAAGGCACTCTCCAGGTTaGAGATTCAGGTTGCTGGCGACCAGACCCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: ATSPRTRRHSPG*RFRLLATRPCT Trigger: TGTGCAGGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCTTCGAGTGCGAGGCGAGGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425542.5 |
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| CDS CAA 72 bp | GGCGACCAGACCCTAGAAGGGCCCATCCTGGGCAGCTaGTCTCGGGTCCTGGCAACTTTTCAGCGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GDQTLEGPILGS*SRVLATFQRSL Trigger: CAGAGAACGCTGAAAAGTTGCCAGGACCCGAGACAAGCTGCCCAGGATGGGCCCTTCTAGGGTCTGGTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489315.5 |
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| CDS TCA 72 bp | ATTCAGGTTGCTGGCGACCAGACCACAAGCCATGATTaGGTCCAGGAGGATGTTCCCGGGCAGGCGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: IQVAGDQTTSHD*VQEDVPGQAHQ Trigger: CTGGTGCGCCTGCCCGGGAACATCCTCCTGGACTCAATCATGGCTTGTGGTCTGGTCGCCAGCAACCTGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000215909.10 ENST00000464120.1 |
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| CDS CAA 90 bp | GCGTCAGGAGCCACCTCGCCTCGCACTCGAAGGCACTCTCCAGGTTaGAGATTCAGGTTGCTGGCGACCAGACCACAAGCCATGATTGAG | + |
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Preference number: 6 (lower is better) Translates to: ASGATSPRTRRHSPG*RFRLLATRPQAMIE Trigger: CTCAATCATGGCTTGTGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCTTCGAGTGCGAGGCGAGGTGGCTCCTGACGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000215909.10 ENST00000454173.1 ENST00000464120.1 ENST00000480207.5 |
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| CDS CAA 72 bp | CGCACTCGAAGGCACTCTCCAGGTTTGAGATTCAGGTaGCTGGCGACCAGACCACAAGCCATGATTGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RTRRHSPGLRFR*LATRPQAMIES Trigger: GGACTCAATCATGGCTTGTGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGAGTGCCTTCGAGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000215909.10 ENST00000454173.1 ENST00000464120.1 ENST00000480207.5 |
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| CDS CAA 72 bp | CGACTAATCTGTCACTCAGTATCCCATGAACGCACCTaGCTGGAAGAACTCACTCTTAGCGTCAGGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RLICHSVSHERT*LEELTLSVRSH Trigger: GTGGCTCCTGACGCTAAGAGTGAGTTCTTCCAGCAAGGTGCGTTCATGGGATACTGAGTGACAGATTAGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472321.1 |
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