RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LFNG (Homo sapiens)

Ensembl gene IDs: ENSG00000106003

Ensembl transcript IDs: ENST00000222725.10, ENST00000338732.7, ENST00000359574.7, ENST00000402045.5, ENST00000402506.5, ENST00000493850.1, ENST00000614382.1

Found 535 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTaGGCGCCTCCCCAGCCCACCAGCATGGCTGCTGGACCTTGGGCA +
Preference number: 1 (lower is better)
Translates to: PAVGRPDPRPAWLGV*APPQPTSMAAGPWA
Trigger: TGCCCAAGGTCCAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR GCA 90 bp GGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGGCCTaGCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGC +
Preference number: 1 (lower is better)
Translates to: GRCSITSCGAAGPTA*LAWSLSASPAHQHG
Trigger: GCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR CCA 90 bp AGCATTACCAGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTaGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGCTGGACC +
Preference number: 1 (lower is better)
Translates to: SITSCGAAGPTACLA*SLSASPAHQHGCWT
Trigger: GGTCCAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR CCA 90 bp AGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTaGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: RGASNAEARAAQQGP*ALWIPGAPRDWVSA
Trigger: GGCTGAGACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 90 bp AGCAGGCCCTGCAGCCCACTGGCCCTCGGAGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTCCACAGAGCAGAACTGCCCAGCAGC +
Preference number: 1 (lower is better)
Translates to: SRPCSPLALGAEAHK*RWCPPLHRAELPSS
Trigger: GCTGCTGGGCAGTTCTGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 90 bp CCTGGGGCCACATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTaGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGC +
Preference number: 1 (lower is better)
Translates to: PGATSQEREVQHYQL*GGRTHGLPGLESER
Trigger: GCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATGTGGCCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR CCA 90 bp CAGCTGGACAGCCAGCCACTGGGGGCTTCGTGGGGCCACTGGAACTaGGCGGTGGCTGCTGTTACTCTTAAGCCACAGCGTCCAGGCCAG +
Preference number: 1 (lower is better)
Translates to: QLDSQPLGASWGHWN*AVAAVTLKPQRPGQ
Trigger: CTGGCCTGGACGCTGTGGCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR GCA 90 bp AGGCACATAAGTGGCGCTGGTGCCCGCCCCTCCACAGAGCAGAACTaGCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACAC +
Preference number: 1 (lower is better)
Translates to: RHISGAGARPSTEQN*PAACYPGGHAVHTH
Trigger: GTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR GCA 90 bp CTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTaGAGCCCACTGGCCCTCGGAGCAGAGGCACATAAGTGGCGCTGG +
Preference number: 1 (lower is better)
Translates to: LGVASDTQILPPSRP*SPLALGAEAHKWRW
Trigger: CCAGCGCCACTTATGTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR GCA 90 bp CTCCACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATaGAGTACACACACACACACACGCACACGCACACGCACAGGCACG +
Preference number: 1 (lower is better)
Translates to: LHRAELPSSLLPGWA*STHTHTRTRTRTGT
Trigger: CGTGCCTGTGCGTGTGCGTGTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 90 bp TTTGCCCAGCTGGACAGCCAGCCACTGGGGGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCTGTTACTCTTAAGCCACAGCGTCCA +
Preference number: 1 (lower is better)
Translates to: FAQLDSQPLGASWGH*NWAVAAVTLKPQRP
Trigger: TGGACGCTGTGGCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCAGCTGGGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 90 bp GTGCCACTGTTTGCCCAGCTGGACAGCCAGCCACTGGGGGCTTCGTaGGGCCACTGGAACTGGGCGGTGGCTGCTGTTACTCTTAAGCCA +
Preference number: 1 (lower is better)
Translates to: VPLFAQLDSQPLGAS*GHWNWAVAAVTLKP
Trigger: TGGCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCAGCTGGGCAAACAGTGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 90 bp AGACCCAGCCTCCCCTGCAATGAGCATGGCTCAGTGAGTCGTACTTaGGGCTATGACACAGGGGCCAGGACTTCAGGGCACAGGTACCCC +
Preference number: 1 (lower is better)
Translates to: RPSLPCNEHGSVSRT*GYDTGARTSGHRYP
Trigger: GGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTGTCATAGCCCCAAGTACGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 90 bp AGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTaGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAA +
Preference number: 1 (lower is better)
Translates to: RGQDFRAQVPPAQSL*SAGRERHLRIASLQ
Trigger: TTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR TCA 90 bp CTTTGCAAAGAGAAAAACAACAAGAAACACAGCCCACGGGACAGGTaGGCCATGCTGGGCCCAGCGGGGAGGTGGCAGCTACACAGGAGG +
Preference number: 1 (lower is better)
Translates to: LCKEKNNKKHSPRDR*AMLGPAGRWQLHRR
Trigger: CCTCCTGTGTAGCTGCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTTTTCTCTTTGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR TCA 90 bp GGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAATGCTGAGCTCTaGCTCACCCTGTCCTGGGGAGGCAAAGGGAAGACCTCTGAGGAG +
Preference number: 1 (lower is better)
Translates to: GDLLSTLERRLNAEL*LTLSWGGKGKTSEE
Trigger: CTCCTCAGAGGTCTTCCCTTTGCCTCCCCAGGACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR GCA 90 bp GCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTaGAAAGTAGCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAAT +
Preference number: 1 (lower is better)
Translates to: ACGQQEEKGTYASHP*KVARSPVAVERSKN
Trigger: ATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CAA 90 bp CAGCATTACCAGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTaGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGCTGGAC +
Preference number: 2 (lower is better)
Translates to: QHYQLWGGRTHGLPG*ESERLPSPPAWLLD
Trigger: GTCCAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR-3UTR TCA 90 bp CATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGGCCTGGCTTGGAGTCTaGGCGCCTCCCCAGCCCACC +
Preference number: 2 (lower is better)
Translates to: HHRRGRCSITSCGAAGPTAWLGV*APPQPT
Trigger: GGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGC...CGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR-3UTR CCA 90 bp TACCAGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCATGGCTGCTGGACCTTaGGCATCAGCTGCTCCGTGC +
Preference number: 2 (lower is better)
Translates to: YQLWGGRTHGLPGLESERMAAGP*ASAAPC
Trigger: GCACGGAGCAGCTGATGCCCAAGGTCCAGCAGCCAT...GCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGG +
Preference number: 2 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHGPWAL*IPGAPR
Trigger: CCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACC...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGGPWAL*IPGAPR
Trigger: CCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACC...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAACCTCCAAGCAGGCCCTaGAGCCCACTGGCCCTCGGA +
Preference number: 2 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEPPSRP*SPLALG
Trigger: TCCGAGGGCCAGTGGGCTGCAGGGCCTGCTTGGAGG...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGG +
Preference number: 2 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEGPWAL*IPGAPR
Trigger: CCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACC...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGG +
Preference number: 2 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGGPWAL*IPGAPR
Trigger: CCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACC...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGGCACATAAGTGGCGCTaGTGCCCGCCCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQAHKWR*CPPLHR
Trigger: TCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGC...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGGCCCTGCAGCCCACTaGCCCTCGGAGCAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: WSAGRERHLRIASLQSSPGPAAH*PSEQRH
Trigger: GTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCC...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGCCTCCAAGCAGGCCCTaGAGCCCACTGGCCCTCGGA +
Preference number: 2 (lower is better)
Translates to: WSAGRERHLRIASLQSSPPPSRP*SPLALG
Trigger: TCCGAGGGCCAGTGGGCTGCAGGGCCTGCTTGGAGG...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGATACGCATCGCATCCCTaGAAAGTAGCCCGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGYASHP*KVARSP
Trigger: GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTA...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCGCACATAAGTGGCGCTaGTGCCCGCCCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: QEEKGTYASHPCKVARSPAHKWR*CPPLHR
Trigger: TCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGC...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAGCCTGCTACCCGGGTaGGCATGCAGTACACACACA +
Preference number: 2 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGSLLPG*ACSTHT
Trigger: TGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCT...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACGGCCCTGCAGCCCACTaGCCCTCGGAGCAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: GRFQMLERINTQSARQSHGPAAH*PSEQRH
Trigger: GTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCC...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAGAATTGCCCTCGGAGTaGCCTCCGACACACAAATCC +
Preference number: 2 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGELPSE*PPTHKS
Trigger: GGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTC...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGAATTGCCCTCGGAGTaGCCTCCGACACACAAATCC +
Preference number: 2 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSELPSE*PPTHKS
Trigger: GGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTC...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAACTGCCCAGCAGCCTaGTACCCGGGTGGGCATGCA +
Preference number: 2 (lower is better)
Translates to: PNRIALGVASDTQILPPSNCPAA*YPGGHA
Trigger: TGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTT...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCCATAAGTGGCGCTGGTaGCCGCCCCTCCACAGAGCA +
Preference number: 2 (lower is better)
Translates to: PNRIALGVASDTQILPPSHKWRW*PPLHRA
Trigger: TGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATG...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTC +
Preference number: 2 (lower is better)
Translates to: GRFQMLERINTQSARQSHAEAHK*RWCPPL
Trigger: GAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGC...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: GRFQMLERINTQSARQSHASWGH*NWAVAA
Trigger: AGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGC...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGCCACTGTGGGCGACTTaGTCTCTACTTTGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGPLWAT*SLLWRG
Trigger: TCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGG...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTGCACATAAGTGGCGCTaGTGCCCGCCCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: SLWSAGRERHLRIASLQSAHKWR*CPPLHR
Trigger: TCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGC...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGACTGGAACTGGGCGGTaGCTGCTGTTACTCTTAAGC +
Preference number: 2 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGTGTGR*LLLLLS
Trigger: GCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGT...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR TCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACCAGCCTCCCCTGCAATaGGCATGGCTCAGTGAGTCG +
Preference number: 2 (lower is better)
Translates to: GRFQMLERINTQSARQSHQPPLQ*AWLSES
Trigger: CGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTG...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTC +
Preference number: 2 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKAEAHK*RWCPPL
Trigger: GAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGC...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLASWGH*NWAVAA
Trigger: AGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGC...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACAGACCCAGCCTCCCCTaGAATGAGCATGGCTCAGTG +
Preference number: 2 (lower is better)
Translates to: GRFQMLERINTQSARQSHRPSLP*NEHGSV
Trigger: CACTGAGCCATGCTCATTGCAGGGGAGGCTGGGTCT...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAGCGCAACAGGGTCCCTaGGCCCTTTGGATACCAGGG +
Preference number: 2 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKAQQGP*ALWIPG
Trigger: CCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAACAGGAGGAAGGGGATTaGGTCACGCACCCCCAGACC +
Preference number: 2 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKQEEGD*VTHPQT
Trigger: GGTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTG...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAACACTGTTTGCCCAGCTaGACAGCCAGCCACTGGGGG +
Preference number: 2 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKHCLPS*TASHWG
Trigger: CCCCCAGTGGCTGGCTGTCCAGCTGGGCAAACAGTG...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR TCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAACAGCCTCCCCTGCAATaGGCATGGCTCAGTGAGTCG +
Preference number: 2 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKQPPLQ*AWLSES
Trigger: CGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTG...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAAACTGCCCAGCAGCCTaGTACCCGGGTGGGCATGCA +
Preference number: 2 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRNCPAA*YPGGHA
Trigger: TGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTT...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAATCCACAGAGCAGAACTaGCCAGCAGCCTGCTACCCG +
Preference number: 2 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKSTEQN*PAACYP
Trigger: CGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGA...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCGGCCCTGCAGCCCACTaGCCCTCGGAGCAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: VTIATTLQFPENFSLIIRGPAAH*PSEQRH
Trigger: GTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCC...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAAAGAGCTGGGAGGGGTaGCACTGTTTGCCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRKSWEG*HCLPSW
Trigger: CCAGCTGGGCAAACAGTGGCACCCCTCCCAGCTCTT...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAAGCCTGCTACCCGGGTaGGCATGCAGTACACACACA +
Preference number: 2 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKSLLPG*ACSTHT
Trigger: TGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCT...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCACAGGTGAGCCATGCTaGGCCCAGCGGGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: VTIATTLQFPENFSLIIRTGEPC*AQRGGG
Trigger: GCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGT...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR TCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGATCGTACTTGGGGCTATaGCACAGGGGCCAGGACTTC +
Preference number: 2 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRSYLGL*HRGQDF
Trigger: GAAGTCCTGGCCCCTGTGTCATAGCCCCAAGTACGA...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR TCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTAGCCCACGGGACAGGTaGGCCATGCTGGGCCCAGCG +
Preference number: 2 (lower is better)
Translates to: TIATTLQFPENFSLIIRFSPRDR*AMLGPA
Trigger: CGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCT...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp TGCTGCAAAGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACATAAGTGGCGCTGGTaGCCGCCCCTCCACAGAGCA +
Preference number: 2 (lower is better)
Translates to: CCKEHLYSQQKDVTIATTHKWRW*PPLHRA
Trigger: TGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATG...TGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCTTTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222725.10
ENST00000402045.5
3UTR-3UTR CCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAAGCCTGCTACCCGGGTaGGCATGCAGTACACACACA +
Preference number: 2 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRSLLPG*ACSTHT
Trigger: TGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCT...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTC +
Preference number: 2 (lower is better)
Translates to: VTIATTLQFPENFSLIIRAEAHK*RWCPPL
Trigger: GAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGC...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTGGCCCTGCAGCCCACTaGCCCTCGGAGCAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: TIATTLQFPENFSLIIRFGPAAH*PSEQRH
Trigger: GTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCC...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TGCTGCAAAGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACAGGAGGAAGGGGATTaGGTCACGCACCCCCAGACC +
Preference number: 2 (lower is better)
Translates to: CCKEHLYSQQKDVTIATTQEEGD*VTHPQT
Trigger: GGTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTG...TGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCTTTGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222725.10
ENST00000402045.5
3UTR-3UTR CCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: VTIATTLQFPENFSLIIRASWGH*NWAVAA
Trigger: AGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGC...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTGGACAGCCAGCCACTaGGGGCTTCGTGGGGCCACT +
Preference number: 2 (lower is better)
Translates to: VTIATTLQFPENFSLIIRWTASH*GLRGAT
Trigger: AGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCA...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTACAGGTGAGCCATGCTaGGCCCAGCGGGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSITGEPC*AQRGGG
Trigger: GCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGT...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCAACTGCCCAGCAGCCTaGTACCCGGGTGGGCATGCA +
Preference number: 2 (lower is better)
Translates to: VTIATTLQFPENFSLIIRNCPAA*YPGGHA
Trigger: TGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTT...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCCATAAGTGGCGCTGGTaGCCGCCCCTCCACAGAGCA +
Preference number: 2 (lower is better)
Translates to: VTIATTLQFPENFSLIIRHKWRW*PPLHRA
Trigger: TGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATG...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTC +
Preference number: 2 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIAEAHK*RWCPPL
Trigger: GAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGC...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGATCAGTGAGTCGTACTTaGGGCTATGACACAGGGGCC +
Preference number: 2 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRSVSRT*GYDTGA
Trigger: GGCCCCTGTGTCATAGCCCCAAGTACGACTCACTGA...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAACTGGAACTGGGCGGTaGCTGCTGTTACTCTTAAGC +
Preference number: 2 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKTGTGR*LLLLLS
Trigger: GCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGT...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAACCACTGGGGGCTTCGTaGGGCCACTGGAACTGGGCG +
Preference number: 2 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQPLGAS*GHWNWA
Trigger: CGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGG...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR TCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCCAGCCTCCCCTGCAATaGGCATGGCTCAGTGAGTCG +
Preference number: 2 (lower is better)
Translates to: VTIATTLQFPENFSLIIRQPPLQ*AWLSES
Trigger: CGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTG...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR TCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTGAGGAGATTAAATGCTaGGCTCTGACTCACCCTGTC +
Preference number: 2 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLEEIKC*ALTHPV
Trigger: GACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTC...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTAACTGCCCAGCAGCCTaGTACCCGGGTGGGCATGCA +
Preference number: 2 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSINCPAA*YPGGHA
Trigger: TGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTT...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTGCACATAAGTGGCGCTaGTGCCCGCCCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIAHKWR*CPPLHR
Trigger: TCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGC...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTCACTGTTTGCCCAGCTaGACAGCCAGCCACTGGGGG +
Preference number: 2 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIHCLPS*TASHWG
Trigger: CCCCCAGTGGCTGGCTGTCCAGCTGGGCAAACAGTG...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCAGGAGGAAGGGGATTaGGTCACGCACCCCCAGACC +
Preference number: 2 (lower is better)
Translates to: TIATTLQFPENFSLIIRFQEEGD*VTHPQT
Trigger: GGTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTG...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTTACGCATCGCATCCCTaGAAAGTAGCCCGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: TIATTLQFPENFSLIIRFYASHP*KVARSP
Trigger: GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTA...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTTGGGGCCACTGGAACTaGGCGGTGGCTGCTGTTACT +
Preference number: 2 (lower is better)
Translates to: TIATTLQFPENFSLIIRFWGHWN*AVAAVT
Trigger: AGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCA...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTAGACCCAGCCTCCCCTaGAATGAGCATGGCTCAGTG +
Preference number: 2 (lower is better)
Translates to: TIATTLQFPENFSLIIRFRPSLP*NEHGSV
Trigger: CACTGAGCCATGCTCATTGCAGGGGAGGCTGGGTCT...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCCCACTGTGGGCGACTTaGTCTCTACTTTGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: VTIATTLQFPENFSLIIRPLWAT*SLLWRG
Trigger: TCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGG...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTTCAGTGAGTCGTACTTaGGGCTATGACACAGGGGCC +
Preference number: 2 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSISVSRT*GYDTGA
Trigger: GGCCCCTGTGTCATAGCCCCAAGTACGACTCACTGA...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCCACTCAGAAGAGCTaGGAGGGGTGCCACTGTTTG +
Preference number: 2 (lower is better)
Translates to: TIATTLQFPENFSLIIRFPTQKS*EGCHCL
Trigger: CAAACAGTGGCACCCCTCCCAGCTCTTCTGAGTGGG...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTGAATTGCCCTCGGAGTaGCCTCCGACACACAAATCC +
Preference number: 2 (lower is better)
Translates to: TIATTLQFPENFSLIIRFELPSE*PPTHKS
Trigger: GGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTC...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAATGGGGCCACTGGAACTaGGCGGTGGCTGCTGTTACT +
Preference number: 2 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKWGHWN*AVAAVT
Trigger: AGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCA...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR TCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAATGAGCATGGCTCAGTaGGTCGTACTTGGGGCTATG +
Preference number: 2 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQMSMAQ*VVLGAM
Trigger: CATAGCCCCAAGTACGACTCACTGAGCCATGCTCAT...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAACCACTGTGGGCGACTTaGTCTCTACTTTGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQPLWAT*SLLWRG
Trigger: TCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGG...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAACCCACTCAGAAGAGCTaGGAGGGGTGCCACTGTTTG +
Preference number: 2 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKPTQKS*EGCHCL
Trigger: CAAACAGTGGCACCCCTCCCAGCTCTTCTGAGTGGG...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR TCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAGAGGAGATTAAATGCTaGGCTCTGACTCACCCTGTC +
Preference number: 2 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQEEIKC*ALTHPV
Trigger: GACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTC...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR GCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTCATAAATACACAGAGTaGCAGACAGTCCCACTTCAG +
Preference number: 2 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIHKYTE*QTVPLQ
Trigger: CTGAAGTGGGACTGTCTGGCACTCTGTGTATTTATG...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAAACTGGAACTGGGCGGTaGCTGCTGTTACTCTTAAGC +
Preference number: 2 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKTGTGR*LLLLLS
Trigger: GCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGT...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 72 bp AGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTaGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGC +
Preference number: 3 (lower is better)
Translates to: SCGAAGPTACLA*SLSASPAHQHG
Trigger: GCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR GCA 72 bp AGCATTACCAGCTGTGGGGCGGCCGGACCCACGGCCTaGCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCAC +
Preference number: 3 (lower is better)
Translates to: SITSCGAAGPTA*LAWSLSASPAH
Trigger: GTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR CCA 72 bp GAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGGGATTGGGTCTCAGCC +
Preference number: 3 (lower is better)
Translates to: EARAAQQGPWAL*IPGAPRDWVSA
Trigger: GGCTGAGACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 3 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR GCA 72 bp AGTGGCGCTGGTGCCCGCCCCTCCACAGAGCAGAACTaGCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTA +
Preference number: 3 (lower is better)
Translates to: SGAGARPSTEQN*PAACYPGGHAV
Trigger: TACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGAGGGGCGGGCACCAGCGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 72 bp CCACTGGCCCTCGGAGCAGAGGCACATAAGTGGCGCTaGTGCCCGCCCCTCCACAGAGCAGAACTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: PLALGAEAHKWR*CPPLHRAELPS
Trigger: GCTGGGCAGTTCTGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGCTCCGAGGGCCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 72 bp ACATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTaGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAG +
Preference number: 3 (lower is better)
Translates to: TSQEREVQHYQL*GGRTHGLPGLE
Trigger: CTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR CCA 72 bp TTTGCCCAGCTGGACAGCCAGCCACTGGGGGCTTCGTaGGGCCACTGGAACTGGGCGGTGGCTGCTGTTACT +
Preference number: 3 (lower is better)
Translates to: FAQLDSQPLGAS*GHWNWAVAAVT
Trigger: AGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCAGCTGGGCAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR GCA 72 bp GCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATaGAGTACACACACACACACACGCACACGCACACGC +
Preference number: 3 (lower is better)
Translates to: AELPSSLLPGWA*STHTHTRTRTR
Trigger: GCGTGTGCGTGTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 72 bp CTGGACAGCCAGCCACTGGGGGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCTGTTACTCTTAAGCCA +
Preference number: 3 (lower is better)
Translates to: LDSQPLGASWGH*NWAVAAVTLKP
Trigger: TGGCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 72 bp CTGAGGAGGCCTGGAAGACTCCCCACTCAGAAGAGCTaGGAGGGGTGCCACTGTTTGCCCAGCTGGACAGCC +
Preference number: 3 (lower is better)
Translates to: LRRPGRLPTQKS*EGCHCLPSWTA
Trigger: GGCTGTCCAGCTGGGCAAACAGTGGCACCCCTCCCAGCTCTTCTGAGTGGGGAGTCTTCCAGGCCTCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 72 bp ACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTaGGCCCAGCGGGGAGGTGGCAGCTACACAGGAGGA +
Preference number: 3 (lower is better)
Translates to: TRNTAHGTGEPC*AQRGGGSYTGG
Trigger: TCCTCCTGTGTAGCTGCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 3 (lower is better)
Translates to: PNRIALGVASDTQILPPSGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 72 bp CACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTaGGCATGCAGTACACACACACACACACGCACACGC +
Preference number: 3 (lower is better)
Translates to: HRAELPSSLLPG*ACSTHTHTRTR
Trigger: GCGTGTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGCCCCCAGCACAGAGCTaGTGGTCAGCAGGAAGAGAA +
Preference number: 3 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGPPAQS*WSAGRE
Trigger: TTCTCTTCCTGCTGACCACAAGCTCTGTGCTGGGGG...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 72 bp CTCCCCTGCAATGAGCATGGCTCAGTGAGTCGTACTTaGGGCTATGACACAGGGGCCAGGACTTCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: LPCNEHGSVSRT*GYDTGARTSGH
Trigger: GTGCCCTGAAGTCCTGGCCCCTGTGTCATAGCCCCAAGTACGACTCACTGAGCCATGCTCATTGCAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 3 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAAAAATCCTAACAGAATaGCCCTCGGAGTGGCCTCCG +
Preference number: 3 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSKILTE*PSEWPP
Trigger: CGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTT...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 3 (lower is better)
Translates to: VAVERSKNPNRIALGVASGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAAAAATCCTAACAGAATaGCCCTCGGAGTGGCCTCCG +
Preference number: 3 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEKILTE*PSEWPP
Trigger: CGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTT...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTCCAGGAGGAAGGGGATaGGGTCACGCACCCCCAGAC +
Preference number: 3 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLPGGRG*GHAPPD
Trigger: GTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTGG...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR GCA 72 bp CAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTaGAAAGTAGCCCGGAGCCCCGTAGCTGTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: QQEEKGTYASHP*KVARSPVAVER
Trigger: TCTTTCTACAGCTACGGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACCCCCCAGCACAGAGCTaGTGGTCAGCAGGAAGAGAA +
Preference number: 3 (lower is better)
Translates to: GRFQMLERINTQSARQSHPPAQS*WSAGRE
Trigger: TTCTCTTCCTGCTGACCACAAGCTCTGTGCTGGGGG...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAAAATCCTAACAGAATaGCCCTCGGAGTGGCCTCCG +
Preference number: 3 (lower is better)
Translates to: SLWSAGRERHLRIASLQSKILTE*PSEWPP
Trigger: CGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTT...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR TCA 72 bp CGACTTGCTCTCTACTTTGGAGAGGAGATTAAATGCTaGGCTCTGACTCACCCTGTCCTGGGGAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: RLALYFGEEIKC*ALTHPVLGRQR
Trigger: CCTTTGCCTCCCCAGGACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTAAAATCCTAACAGAATaGCCCTCGGAGTGGCCTCCG +
Preference number: 3 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLKILTE*PSEWPP
Trigger: CGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTT...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAAGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 3 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAACCAGGAGGAAGGGGATaGGGTCACGCACCCCCAGAC +
Preference number: 3 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQPGGRG*GHAPPD
Trigger: GTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTGG...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CCA 72 bp AAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTaGCCTCCGACACACAAATCCTTCCTCCAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: KDPKILTELPSE*PPTHKSFLQAG
Trigger: GCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTCCCACTGTGGGCGACTaGCTCTCTACTTTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIPTVGD*LSTLER
Trigger: CCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGG...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCCACTGTGGGCGACTaGCTCTCTACTTTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: TIATTLQFPENFSLIIRFPTVGD*LSTLER
Trigger: CCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGG...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCGACTTGCTCTCTACTTaGGAGAGGAGATTAAATGCT +
Preference number: 3 (lower is better)
Translates to: VTIATTLQFPENFSLIIRDLLST*ERRLNA
Trigger: AGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTC...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR-3UTR CAA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAAGACTTGCTCTCTACTTaGGAGAGGAGATTAAATGCT +
Preference number: 3 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKDLLST*ERRLNA
Trigger: AGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTC...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCTTGCAGGACAGCGCCTaGCGGCTGTGGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LWGGRTHGLPGLESERLPLQDSA*RLWAAE
Trigger: CTCGGCCGCCCACAGCCGCCAGGCGCTGTCCTGCAA...GGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp TGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCGTGTGCGGGTAGCTaGCCAGCAGCCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CGAAGPTACLAWSLSASPACAGS*PAAAAG
Trigger: CCCTGCTGCGGCTGCTGGCCAGCTACCCGCACACGC...TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGGCGTGTGCGGGTAGCTaGCCAGCAGCCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGACAGS*PAAAAG
Trigger: CCCTGCTGCGGCTGCTGGCCAGCTACCCGCACACGC...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCAGCATTACCAGCTGTaGGGCGGCCGGACCCACGGC +
Preference number: 4 (lower is better)
Translates to: SCGAAGPTACLAWSLSASQHYQL*GGRTHG
Trigger: GCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTG...GGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp AGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCAGCGGGGTCGGGGCCTaGGGCCACATCACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SCGAAGPTACLAWSLSASSGVGA*GHITGE
Trigger: CTCTCCTGTGATGTGGCCCCAGGCCCCGACCCCGCT...GGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp ACCAGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTGGGACCAGCTGCAGTaGGGGCTCCGGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: TSCGAAGPTACLAWSLSAWDQLQ*GLRHCS
Trigger: GGAGCAGTGCCGGAGCCCCCACTGCAGCTGGTCCCA...GGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR TCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTGCCGGCCGCAGCGCTTaGGCATGGTGGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGAGRSA*AWWGGG
Trigger: GCCGCCACCCCACCATGCTCAAGCGCTGCGGCCGGC...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR TCA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGGAGCCAGCCCACGGCTaGTGCAGAAGCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GASNAEARAAQQGPWALWEPAHG*CRSQRR
Trigger: GCGGCGCTGGCTTCTGCATCAGCCGTGGGCTGGCTC...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGCTGGAGCCAGCCCACGGCTaGTGCAGAAGCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GLPGLESERLPSPPAWLLEPAHG*CRSQRR
Trigger: GCGGCGCTGGCTTCTGCATCAGCCGTGGGCTGGCTC...CAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR GCA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGCCTTCCCCGTGCGCCTaGCTTGCACCGACCCGAAGC +
Preference number: 4 (lower is better)
Translates to: HTHRHGPRGASNAEARAAPSPCA*LAPTRS
Trigger: GCTTCGGGTCGGTGCAAGGCAGGCGCACGGGGAAGG...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR GCA 90 bp TGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCATGGGGGCTCCGGCACTaGTCCTGCTCTCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: CGAAGPTACLAWSLSASPWGLRH*SCSPGL
Trigger: GAGTCCTGGAGAGCAGGAGCAGTGCCGGAGCCCCCA...TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp AGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCAGCGTCACCTGCTCGTaGAGCTCCGAGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: SCGAAGPTACLAWSLSASSVTCS*SSEVGT
Trigger: GGTGCCCACCTCGGAGCTCCACGAGCAGGTGACGCT...GGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGAGGCCCTGCAGCCCACTaGCCCTCGGAGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGGPAAH*PSEQRH
Trigger: GTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCC...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCCCCAGCCCACCAGCATaGCTGCTGGACCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LWGGRTHGLPGLESERLPPSPPA*LLDLGH
Trigger: ATGCCCAAGGTCCAGCAGCCATGCTGGTGGGCTGGG...GGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAG
71% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR TCA 90 bp CTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCGCAGGGCCCGCAGGTTaGCGTAGTTGTCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: LWGGRTHGLPGLESERLPAGPAG*RSCHRP
Trigger: TGGACGATGACAACTACGTCAACCTGCGGGCCCTGC...GGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR TCA 90 bp TGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCACCTTGTTCTCGCTaGCCCGCTCCATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CGAAGPTACLAWSLSASPAPCSR*PAPWPG
Trigger: TCCAGGCCATGGAGCGGGTCAGCGAGAACAAGGTGC...TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR TCA 90 bp GGGGCTGGGACCAGCTGCAGTGGGGGCTCCGGCACTGCTCCTGCTCTCCAGGACGCCGTATTCATGAAGTaGCCCCCGCTGGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: GAGTSCSGGSGTAPALQDAVFMK*PPLAHG
Trigger: CCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGC...GTCCTGGAGAGCAGGAGCAGTGCCGGAGCCCCCACTGCAGCTGGTCCCAGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR TCA 90 bp GGGGCCACATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGGCCTGGCTTGGAGTCTaGGCGCCTCCCCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GATSQEREVQHYQLWGGRAWLGV*APPQPT
Trigger: GGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGC...CCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATGTGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR GCA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGTGTCCAGGCTGGGCTTaGCGACGTAGACGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: HTHRHGPRGASNAEARAACPGWA*RRRRPA
Trigger: CGCGGGACGTCTACGTCGGCAAGCCCAGCCTGGACA...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGCTGAGCGCCTGGCGGCTGTaGGCGGCCGAGCAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: GLPGLESERLPSPPAWLLSAWRL*AAEQFV
Trigger: CACAAACTGCTCGGCCGCCCACAGCCGCCAGGCGCT...CAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGACCCGCTCCATGGCCTaGATGGGCCTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HTHRHGPRGASNAEARAATRSMA*MGLSRL
Trigger: CAGCCTGGACAGGCCCATCCAGGCCATGGAGCGGGT...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCACGTGGAGCTCCGAGGTaGGCACCTGCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CGAAGPTACLAWSLSASPRGAPR*APAAGS
Trigger: AGAACCTGCAGCAGGTGCCCACCTCGGAGCTCCACG...TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGAGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGGPWAL*IPGAPR
Trigger: CCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACC...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGAEAHK*RWCPPL
Trigger: GAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGC...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCACTCAGTTTCCCCACCTaGATGGGTCGGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: CGAAGPTACLAWSLSASPLSFPT*MGRPPP
Trigger: CGGTGGAGGCCGACCCATCCAGGTGGGGAAACTGAG...TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR TCA 90 bp CATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGAGAGGCCGCTGCGGATaGGGGGCACACCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HHRRGRCSITSCGAAGPTRGRCG*GAHPAG
Trigger: CCCTGCTGGGTGTGCCCCTCATCCGCAGCGGCCTCT...CGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR GCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACGCGCGCCCTTCCCCGTaGGCCTGCCTTGCACCGACC +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHARPSP*ACLAPT
Trigger: GGTCGGTGCAAGGCAGGCGCACGGGGAAGGGCGCGC...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR GCA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGTACTCGGACAGACTGTaGACGTCGCGGACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGYSDRL*TSRTSA
Trigger: GGCGCTGGTCCGCGACGTGCACAGTCTGTCCGAGTA...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR GCA 90 bp GGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGCTGTGTCCAGGCTGGGCTTaGCGACGTAGACGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GLPGLESERLPSPPAWLLCPGWA*RRRRPA
Trigger: CGCGGGACGTCTACGTCGGCAAGCCCAGCCTGGACA...CAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR GCA 90 bp TACCAGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCTCCGAGGTGGGCACCTaGTGCAGGTTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YQLWGGRTHGLPGLESERSEVGT*CRFSRW
Trigger: CCACCTGGAGAACCTGCAGCAGGTGCCCACCTCGGA...GCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR GCA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGCATAAGTGGCGCTGGTaGCCGCCCCTCCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGHKWRW*PPLHRA
Trigger: TGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATG...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCATCAGCTGCTCCGTaGCTCAGTTTCCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: CGAAGPTACLAWSLSASPASAAP*LSFPTW
Trigger: CCAGGTGGGGAAACTGAGGCACGGAGCAGCTGATGC...TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR GCA 90 bp CATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGGGGGCTGGGACCAGCTaGAGTGGGGGCTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: HHRRGRCSITSCGAAGPTGAGTS*SGGSGT
Trigger: AGTGCCGGAGCCCCCACTGCAGCTGGTCCCAGCCCC...CGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTTTGCAGGACAGCGCCTaGCGGCTGTGGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGLQDSA*RLWAAE
Trigger: CTCGGCCGCCCACAGCCGCCAGGCGCTGTCCTGCAA...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGGGCCTGTCCAGGCTaGGCTTGCCGACGTAGACGT +
Preference number: 4 (lower is better)
Translates to: PTACLAWSLSASPAHQHGWACPG*ACRRRR
Trigger: ACGTCTACGTCGGCAAGCCCAGCCTGGACAGGCCCA...GCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGAACCCGCTCCATGGCCTaGATGGGCCTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGTRSMA*MGLSRL
Trigger: CAGCCTGGACAGGCCCATCCAGGCCATGGAGCGGGT...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGAGGATGGAGCGGAACCTaGATGGGTCGGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGGWSGT*MGRPPP
Trigger: CGGTGGAGGCCGACCCATCCAGGTTCCGCTCCATCC...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGGCGCAACAGGGTCCCTaGGCCCTTTGGATACCAGGG +
Preference number: 4 (lower is better)
Translates to: HTHRHGPRGASNAEARAAAQQGP*ALWIPG
Trigger: CCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGGCACATAAGTGGCGCTaGTGCCCGCCCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGAHKWR*CPPLHR
Trigger: TCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGC...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGTGGACAGCCAGCCACTaGGGGCTTCGTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GASNAEARAAQQGPWALWWTASH*GLRGAT
Trigger: AGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCA...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGCTGACGGCCTGCCTGGCTTaGAGTCTGAGCGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLPGLESERLPSPPAWLLTACLA*SLSASP
Trigger: TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGT...CAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
3UTR CAA 72 bp CGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAGGGATTGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGQGSATGSLGP*DTRGAQGLGLS
Trigger: GCTGAGACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCGCTCAGCCGTATTCATaGAGTGACCCCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AALPAVGRPDPRPAWLGVAQPYS*SDPRWP
Trigger: GGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGC...GACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR GCA 90 bp GCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTACTCGGACAGACTGTaGACGTCGCGGACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AALPAVGRPDPRPAWLGVYSDRL*TSRTSA
Trigger: GGCGCTGGTCCGCGACGTGCACAGTCTGTCCGAGTA...GACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR GCA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGTACGCATCGCATCCCTaGAAAGTAGCCCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGYASHP*KVARSP
Trigger: GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTA...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGAAGAGCTGGGAGGGGTaGCACTGTTTGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGKSWEG*HCLPSW
Trigger: CCAGCTGGGCAAACAGTGGCACCCCTCCCAGCTCTT...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp CCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCAAGCGTCTGGATCTCTaGAGGGGCTGGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: PTACLAWSLSASPAHQHGKRLDL*RGWDQL
Trigger: CAGCTGGTCCCAGCCCCTGCAGAGATCCAGACGCTT...GCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCATTGCAGGACAGCGCCTaGCGGCTGTGGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SNAEARAAQQGPWALWIPLQDSA*RLWAAE
Trigger: CTCGGCCGCCCACAGCCGCCAGGCGCTGTCCTGCAA...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACTTGCAGGACAGCGCCTaGCGGCTGTGGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHLQDSA*RLWAAE
Trigger: CTCGGCCGCCCACAGCCGCCAGGCGCTGTCCTGCAA...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACGCGTGTGCGGGTAGCTaGCCAGCAGCCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHACAGS*PAAAAG
Trigger: CCCTGCTGCGGCTGCTGGCCAGCTACCCGCACACGC...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATGGGCCTGTCCAGGCTaGGCTTGCCGACGTAGACGT +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGWACPG*ACRRRR
Trigger: ACGTCTACGTCGGCAAGCCCAGCCTGGACAGGCCCA...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCAGCGTCACCTGCTCGTaGAGCTCCGAGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVSVTCS*SSEVGT
Trigger: GGTGCCCACCTCGGAGCTCCACGAGCAGGTGACGCT...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAAAGGGCCCCTTCACGTaGACGGCGTTCCGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: CGAAGPTACLAWSLSASPKGPFT*TAFRLF
Trigger: AAACAAGCGGAACGCCGTCCACGTGAAGGGGCCCTT...TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGGGAGCGGAACCTGGATaGGTCGGCCTCCACCGAGAA +
Preference number: 4 (lower is better)
Translates to: GASNAEARAAQQGPWALWGAEPG*VGLHRE
Trigger: TTCTCGGTGGAGGCCGACCCATCCAGGTTCCGCTCC...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACGGCCCTGCAGCCCACTaGCCCTCGGAGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHGPAAH*PSEQRH
Trigger: GTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCC...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGCAGGAGGAAGGGGATTaGGTCACGCACCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GASNAEARAAQQGPWALWQEEGD*VTHPQT
Trigger: GGTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTG...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGAGCAGGGCCCGCAGGTTaGCGTAGTTGTCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGAGPAG*RSCHRP
Trigger: TGGACGATGACAACTACGTCAACCTGCGGGCCCTGC...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTGCCGTATTCATGAAGTaGCCCCCGCTGGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGAVFMK*PPLAHG
Trigger: CCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGC...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGAGAGGCCGCTGCGGATaGGGGGCACACCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQRGRCG*GAHPAG
Trigger: CCCTGCTGGGTGTGCCCCTCATCCGCAGCGGCCTCT...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGACAGCCTCCCCTGCAATaGGCATGGCTCAGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGQPPLQ*AWLSES
Trigger: CGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTG...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGAGCCCACGGGACAGGTaGGCCATGCTGGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQSPRDR*AMLGPA
Trigger: CGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCT...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAGCCCACGGGACAGGTaGGCCATGCTGGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGSPRDR*AMLGPA
Trigger: CGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCT...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCCACCTCCGTAGGACCTaGGAGCTGGTGTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVHLRRT*ELVLGS
Trigger: GGAGCCCAACACCAGCTCTCAGGTCCTACGGAGGTG...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR GCA 90 bp GGGGCCACATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGACCACGTTGCCCGTGTaGCTGGCCAGGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GATSQEREVQHYQLWGGRTTLPV*LARASS
Trigger: AGATGAGGCCCTGGCCAGGCACACGGGCAACGTGGT...CCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATGTGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR GCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCACCTCCAAGCAGGCCCTaGAGCCCACTGGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SNAEARAAQQGPWALWIPPPSRP*SPLALG
Trigger: TCCGAGGGCCAGTGGGCTGCAGGGCCTGCTTGGAGG...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACCCTCCAAGCAGGCCCTaGAGCCCACTGGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHPPSRP*SPLALG
Trigger: TCCGAGGGCCAGTGGGCTGCAGGGCCTGCTTGGAGG...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGACAGGTGAGCCATaGTGGGCCCAGCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SNAEARAAQQGPWALWIPGTGEP*WAQRGG
Trigger: ACCTCCCCGCTGGGCCCAGCATGGCTCACCTGTCCC...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GGGGCTGGGACCAGCTGCAGTGGGGGCTCCGGCACTGCTCCTGCTCTCCAGGACACCTTGGGCATCAGCTaGTCCGTGCCTCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GAGTSCSGGSGTAPALQDTLGIS*SVPQFP
Trigger: GGGAAACTGAGGCACGGAGCAGCTGATGCCCAAGGT...GTCCTGGAGAGCAGGAGCAGTGCCGGAGCCCCCACTGCAGCTGGTCCCAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp TGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAAACGTCATCTCCTTGTaGCGCGAGATCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CGAAGPTACLAWSLSASPNVISL*REIQVS
Trigger: GGAGACCTGGATCTCGCGCCACAAGGAGATGACGTT...TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCATTGCAGGACAGCGCCTaGCGGCTGTGGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSLQDSA*RLWAAE
Trigger: CTCGGCCGCCCACAGCCGCCAGGCGCTGTCCTGCAA...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGACCCGCTCCATGGCCTaGATGGGCCTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HHRRGRCSITSCGAAGPTTRSMA*MGLSRL
Trigger: CAGCCTGGACAGGCCCATCCAGGCCATGGAGCGGGT...CGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCCGTGGAGCTCCGAGGTaGGCACCTGCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVRGAPR*APAAGS
Trigger: AGAACCTGCAGCAGGTGCCCACCTCGGAGCTCCACG...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTAGCGTCACCTGCTCGTaGAGCTCCGAGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGSVTCS*SSEVGT
Trigger: GGTGCCCACCTCGGAGCTCCACGAGCAGGTGACGCT...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGACAGGTGGCAGTGGATaGAGCGGAACCTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: HTHRHGPRGASNAEARAATGGSG*SGTWMG
Trigger: ACCCATCCAGGTTCCGCTCCATCCACTGCCACCTGT...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGGTGTCCGGGTACAGGTaGCAGTGGATGGAGCGGAAC +
Preference number: 4 (lower is better)
Translates to: GASNAEARAAQQGPWALWVSGYR*QWMERN
Trigger: GTTCCGCTCCATCCACTGCCACCTGTACCCGGACAC...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACCCACTGGGGGCTTCGTaGGGCCACTGGAACTGGGCG +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHPLGAS*GHWNWA
Trigger: CGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGG...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCCACTGTTTGCCCAGCTaGACAGCCAGCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVHCLPS*TASHWG
Trigger: CCCCCAGTGGCTGGCTGTCCAGCTGGGCAAACAGTG...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGCCCACTCAGAAGAGCTaGGAGGGGTGCCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: HTHRHGPRGASNAEARAAPTQKS*EGCHCL
Trigger: CAAACAGTGGCACCCCTCCCAGCTCTTCTGAGTGGG...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCGTTTCCCCACCTGGATaGGTCGGCCTCCACCGAGAA +
Preference number: 4 (lower is better)
Translates to: AALPAVGRPDPRPAWLGVVSPPG*VGLHRE
Trigger: TTCTCGGTGGAGGCCGACCCATCCAGGTGGGGAAAC...GACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR TCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAGAGCCAGCCCACGGCTaGTGCAGAAGCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEEPAHG*CRSQRR
Trigger: GCGGCGCTGGCTTCTGCATCAGCCGTGGGCTGGCTC...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAAGAGGCCGCTGCGGATaGGGGGCACACCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQERGRCG*GAHPAG
Trigger: CCCTGCTGGGTGTGCCCCTCATCCGCAGCGGCCTCT...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCAGAGGCCGCTGCGGATaGGGGGCACACCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPRGRCG*GAHPAG
Trigger: CCCTGCTGGGTGTGCCCCTCATCCGCAGCGGCCTCT...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATCGTACTTGGGGCTATaGCACAGGGGCCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGSYLGL*HRGQDF
Trigger: GAAGTCCTGGCCCCTGTGTCATAGCCCCAAGTACGA...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTACCACGTTGCCCGTGTaGCTGGCCAGGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGTTLPV*LARASS
Trigger: AGATGAGGCCCTGGCCAGGCACACGGGCAACGTGGT...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCATGTCCAGGCTGGGCTTaGCGACGTAGACGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SNAEARAAQQGPWALWIPCPGWA*RRRRPA
Trigger: CGCGGGACGTCTACGTCGGCAAGCCCAGCCTGGACA...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCTCCACAGAGCAGAACTaGCCAGCAGCCTGCTACCCG +
Preference number: 4 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVSTEQN*PAACYP
Trigger: CGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGA...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGAGACCCAGCCTCCCCTaGAATGAGCATGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GASNAEARAAQQGPWALWRPSLP*NEHGSV
Trigger: CACTGAGCCATGCTCATTGCAGGGGAGGCTGGGTCT...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGAAGACCCAGCCTCCCCTaGAATGAGCATGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGRPSLP*NEHGSV
Trigger: CACTGAGCCATGCTCATTGCAGGGGAGGCTGGGTCT...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCACGTTGCCCGTGTGCCTaGCCAGGGCCTCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: SNAEARAAQQGPWALWIPRCPCA*PGPHLP
Trigger: GGGAAGATGAGGCCCTGGCCAGGCACACGGGCAACG...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAGCGTGTGCGGGTAGCTaGCCAGCAGCCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEACAGS*PAAAAG
Trigger: CCCTGCTGCGGCTGCTGGCCAGCTACCCGCACACGC...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGAAGGGCCCCTTCACGTaGACGGCGTTCCGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GASNAEARAAQQGPWALWKGPFT*TAFRLF
Trigger: AAACAAGCGGAACGCCGTCCACGTGAAGGGGCCCTT...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATGGCCACTAGAAGATaGCAGTGCGGGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: GASNAEARAAQQGPWALWMATRR*QCGDTR
Trigger: CCTGGTGTCCCCGCACTGCCATCTTCTAGTGGCCAT...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTaGGTCTCAGCCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: SNAEARAAQQGPWALWIPGAPRD*VSAMAT
Trigger: AGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCC...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCGGCCCTGCAGCCCACTaGCCCTCGGAGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPGPAAH*PSEQRH
Trigger: GTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCC...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACAGGCCCTGCAGCCCACTaGCCCTCGGAGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTGPAAH*PSEQRH
Trigger: GTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCC...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGTCAGTGAGTCGTACTTaGGGCTATGACACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGSVSRT*GYDTGA
Trigger: GGCCCCTGTGTCATAGCCCCAAGTACGACTCACTGA...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACTGGACAGCCAGCCACTaGGGGCTTCGTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHWTASH*GLRGAT
Trigger: AGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCA...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCACTGTTTGCCCAGCTaGACAGCCAGCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGHCLPS*TASHWG
Trigger: CCCCCAGTGGCTGGCTGTCCAGCTGGGCAAACAGTG...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAACAGGTGAGCCATGCTaGGCCCAGCGGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGTGEPC*AQRGGG
Trigger: GCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGT...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGTCCTGCCGGACTCGATaGAGCGGTCATACTCCACGG +
Preference number: 4 (lower is better)
Translates to: HHRRGRCSITSCGAAGPTSCRTR*SGHTPR
Trigger: CCGTGGAGTATGACCGCTTCATCGAGTCCGGCAGGA...CGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR TCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTTCCTGCCGGACTCGATaGAGCGGTCATACTCCACGG +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGSCRTR*SGHTPR
Trigger: CCGTGGAGTATGACCGCTTCATCGAGTCCGGCAGGA...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGATGAGCATGGCTCAGTaGGTCGTACTTGGGGCTATG +
Preference number: 4 (lower is better)
Translates to: HTHRHGPRGASNAEARAAMSMAQ*VVLGAM
Trigger: CATAGCCCCAAGTACGACTCACTGAGCCATGCTCAT...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAAACTGCCCAGCAGCCTaGTACCCGGGTGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: SNAEARAAQQGPWALWIPNCPAA*YPGGHA
Trigger: TGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTT...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCAGACCCAGCCTCCCCTaGAATGAGCATGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVRPSLP*NEHGSV
Trigger: CACTGAGCCATGCTCATTGCAGGGGAGGCTGGGTCT...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACAGGGACAGGTGAGCCATaGTGGGCCCAGCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SRTAQQPATRVGMQYTHTGTGEP*WAQRGG
Trigger: ACCTCCCCGCTGGGCCCAGCATGGCTCACCTGTCCC...TGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp CATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGCTCCGGCACTGCTCCTaGTCTCCAGGACTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HHRRGRCSITSCGAAGPTLRHCS*SPGLFP
Trigger: TGGGAAGAGTCCTGGAGAGCAGGAGCAGTGCCGGAG...CGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp GGGGCCACATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGTCGAGGCGCGCGCGGTaGAACTTTTTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GATSQEREVQHYQLWGGRSRRAR*NFLVVL
Trigger: CAAGACCACCAAAAAGTTCCACCGCGCGCGCCTCGA...CCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATGTGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACAAGCGCCTGGCGGCTGTaGGCGGCCGAGCAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTSAWRL*AAEQFV
Trigger: CACAAACTGCTCGGCCGCCCACAGCCGCCAGGCGCT...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAAGCGTCACCTGCTCGTaGAGCTCCGAGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSSVTCS*SSEVGT
Trigger: GGTGCCCACCTCGGAGCTCCACGAGCAGGTGACGCT...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTGTGTCCGGGTACAGGTaGCAGTGGATGGAGCGGAAC +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGVSGYR*QWMERN
Trigger: GTTCCGCTCCATCCACTGCCACCTGTACCCGGACAC...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQASWGH*NWAVAA
Trigger: AGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGC...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGCCACTGGGGGCTTCGTaGGGCCACTGGAACTGGGCG +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGPLGAS*GHWNWA
Trigger: CGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGG...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCCCACTGGGGGCTTCGTaGGGCCACTGGAACTGGGCG +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPPLGAS*GHWNWA
Trigger: CGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGG...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCACAGGTGAGCCATGCTaGGCCCAGCGGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPTGEPC*AQRGGG
Trigger: GCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGT...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGACCCACGATGGCTGCTGGACCTTaGGCATCAGCTGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: HHRRGRCSITSCGAAGPTMAAGP*ASAAPC
Trigger: GCACGGAGCAGCTGATGCCCAAGGTCCAGCAGCCAT...CGTGGGTCCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR TCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGGCTCAGCCGTATTCATaGAGTGACCCCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQAQPYS*SDPRWP
Trigger: GGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGC...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAGCTCAGCCGTATTCATaGAGTGACCCCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGAQPYS*SDPRWP
Trigger: GGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGC...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGAGAGGCCGCTGCGGATaGGGGGCACACCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPRGRCG*GAHPAG
Trigger: CCCTGCTGGGTGTGCCCCTCATCCGCAGCGGCCTCT...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTTCGTACTTGGGGCTATaGCACAGGGGCCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGSYLGL*HRGQDF
Trigger: GAAGTCCTGGCCCCTGTGTCATAGCCCCAAGTACGA...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGGAGGAGATTAAATGCTaGGCTCTGACTCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGEEIKC*ALTHPV
Trigger: GACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTC...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAACCACGTTGCCCGTGTaGCTGGCCAGGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGTTLPV*LARASS
Trigger: AGATGAGGCCCTGGCCAGGCACACGGGCAACGTGGT...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGTCCGAGGTGGGCACCTaGTGCAGGTTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQSEVGT*CRFSRW
Trigger: CCACCTGGAGAACCTGCAGCAGGTGCCCACCTCGGA...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAAACTGCCCAGCAGCCTaGTACCCGGGTGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSNCPAA*YPGGHA
Trigger: TGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTT...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACAAGAGCTGGGAGGGGTaGCACTGTTTGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHKSWEG*HCLPSW
Trigger: CCAGCTGGGCAAACAGTGGCACCCCTCCCAGCTCTT...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGATGGGCCTGTCCAGGCTaGGCTTGCCGACGTAGACGT +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGWACPG*ACRRRR
Trigger: ACGTCTACGTCGGCAAGCCCAGCCTGGACAGGCCCA...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCACCCGCTCCATGGCCTaGATGGGCCTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPTRSMA*MGLSRL
Trigger: CAGCCTGGACAGGCCCATCCAGGCCATGGAGCGGGT...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCACGTGGAGCTCCGAGGTaGGCACCTGCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSRGAPR*APAAGS
Trigger: AGAACCTGCAGCAGGTGCCCACCTCGGAGCTCCACG...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGGGAGCGGAACCTGGATaGGTCGGCCTCCACCGAGAA +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQGAEPG*VGLHRE
Trigger: TTCTCGGTGGAGGCCGACCCATCCAGGTTCCGCTCC...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGGGATGGAGCGGAACCTaGATGGGTCGGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGGWSGT*MGRPPP
Trigger: CGGTGGAGGCCGACCCATCCAGGTTCCGCTCCATCC...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTATGGCCACTAGAAGATaGCAGTGCGGGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGMATRR*QCGDTR
Trigger: CCTGGTGTCCCCGCACTGCCATCTTCTAGTGGCCAT...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGATTGGGTCTCAGCCATaGCCACTAGAAGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: HTHRHGPRGASNAEARAAIGSQP*PLEDGS
Trigger: ACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAAT...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAGGGGCGCCCAGGGATTaGGTCTCAGCCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEGAPRD*VSAMAT
Trigger: AGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCC...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAGCGCAACAGGGTCCCTaGGCCCTTTGGATACCAGGG +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGAQQGP*ALWIPG
Trigger: CCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEAEAHK*RWCPPL
Trigger: GAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGC...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGCAGGAGGAAGGGGATTaGGTCACGCACCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQQEEGD*VTHPQT
Trigger: GGTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTG...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGACAGGAGGAAGGGGATTaGGTCACGCACCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGQEEGD*VTHPQT
Trigger: GGTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTG...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACTGGGGCCACTGGAACTaGGCGGTGGCTGCTGTTACT +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHWGHWN*AVAAVT
Trigger: AGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCA...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAATGGACAGCCAGCCACTaGGGGCTTCGTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEWTASH*GLRGAT
Trigger: AGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCA...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAGCACCTTGTTCTCGCTaGCCCGCTCCATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEAPCSR*PAPWPG
Trigger: TCCAGGCCATGGAGCGGGTCAGCGAGAACAAGGTGC...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACAGCTCAGCCGTATTCATaGAGTGACCCCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTAQPYS*SDPRWP
Trigger: GGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGC...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGACAGCCTCCCCTGCAATaGGCATGGCTCAGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGQPPLQ*AWLSES
Trigger: CGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTG...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGAAATACGTGTCCAGCCTaGGCCTTCCTGTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGNTCPA*AFLSVH
Trigger: ATGAACAGACAGGAAGGCTCAGGCTGGACACGTATT...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR GCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCCCCGTGCGCCTGCCTTaGACCGACCCGAAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PNRIALGVASDTQILPPSPVRLP*TDPKPV
Trigger: GACGGGCTTCGGGTCGGTGCAAGGCAGGCGCACGGG...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR GCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCTCCGAGGTGGGCACCTaGTGCAGGTTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPSEVGT*CRFSRW
Trigger: CCACCTGGAGAACCTGCAGCAGGTGCCCACCTCGGA...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGAACTGCCCAGCAGCCTaGTACCCGGGTGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGNCPAA*YPGGHA
Trigger: TGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTT...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGTCCACAGAGCAGAACTaGCCAGCAGCCTGCTACCCG +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQSTEQN*PAACYP
Trigger: CGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGA...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCCATAAGTGGCGCTGGTaGCCGCCCCTCCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPHKWRW*PPLHRA
Trigger: TGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATG...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACATAAGTGGCGCTGGTaGCCGCCCCTCCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTHKWRW*PPLHRA
Trigger: TGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATG...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAAGAGCTGGGAGGGGTaGCACTGTTTGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGKSWEG*HCLPSW
Trigger: CCAGCTGGGCAAACAGTGGCACCCCTCCCAGCTCTT...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCTTCCTTGGGAGGCTCTaGCAGTGTTGCAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVFLGRL*QCCSLV
Trigger: GACTAAGCTGCAACACTGGCAGAGCCTCCCAAGGAA...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR CCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGAGCGCCTGGCGGCTGTaGGCGGCCGAGCAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPSAWRL*AAEQFV
Trigger: CACAAACTGCTCGGCCGCCCACAGCCGCCAGGCGCT...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGGGCCACATCACAGGAGAGGGAGGTGCAGCATTACCAGCTGTGGGGCGGCCGGGTGGCAAACCAGAAGTaGACAGGACGCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GATSQEREVQHYQLWGGRVANQK*TGRTLF
Trigger: GAACAAGGTGCGTCCTGTCCACTTCTGGTTTGCCAC...CCGGCCGCCCCACAGCTGGTAATGCTGCACCTCCCTCTCCTGTGATGTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGTACAGGTGGCAGTaGATGGAGCGGAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: SNAEARAAQQGPWALWIPGYRWQ*MERNLD
Trigger: ATCCAGGTTCCGCTCCATCCACTGCCACCTGTACCC...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGAATTGGGTCTCAGCCATaGCCACTAGAAGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGIGSQP*PLEDGS
Trigger: ACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAAT...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGGCGCAACAGGGTCCCTaGGCCCTTTGGATACCAGGG +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGAQQGP*ALWIPG
Trigger: CCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACAGCACATAAGTGGCGCTaGTGCCCGCCCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: SRTAQQPATRVGMQYTHTAHKWR*CPPLHR
Trigger: TCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGC...TGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTTCAGTGAGTCGTACTTaGGGCTATGACACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGSVSRT*GYDTGA
Trigger: GGCCCCTGTGTCATAGCCCCAAGTACGACTCACTGA...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCATGGGGCCACTGGAACTaGGCGGTGGCTGCTGTTACT +
Preference number: 4 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSWGHWN*AVAAVT
Trigger: AGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCA...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAACACTGTTTGCCCAGCTaGACAGCCAGCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEHCLPS*TASHWG
Trigger: CCCCCAGTGGCTGGCTGTCCAGCTGGGCAAACAGTG...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGACAGGTGAGCCATGCTaGGCCCAGCGGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPTGEPC*AQRGGG
Trigger: GCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGT...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGGCAGGGCCCGCAGGTTaGCGTAGTTGTCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGAGPAG*RSCHRP
Trigger: TGGACGATGACAACTACGTCAACCTGCGGGCCCTGC...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAAGCAGGGCCCGCAGGTTaGCGTAGTTGTCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEAGPAG*RSCHRP
Trigger: TGGACGATGACAACTACGTCAACCTGCGGGCCCTGC...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACGAGCCAGCCCACGGCTaGTGCAGAAGCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GRFQMLERINTQSARQSHEPAHG*CRSQRR
Trigger: GCGGCGCTGGCTTCTGCATCAGCCGTGGGCTGGCTC...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGCAGCCTCCCCTGCAATaGGCATGGCTCAGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGQPPLQ*AWLSES
Trigger: CGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTG...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCGAGGAGATTAAATGCTaGGCTCTGACTCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVEEIKC*ALTHPV
Trigger: GACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTC...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCTCCACAGAGCAGAACTaGCCAGCAGCCTGCTACCCG +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPSTEQN*PAACYP
Trigger: CGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGA...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACATCCACAGAGCAGAACTaGCCAGCAGCCTGCTACCCG +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTSTEQN*PAACYP
Trigger: CGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGA...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGTACGCATCGCATCCCTaGAAAGTAGCCCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGYASHP*KVARSP
Trigger: GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTA...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGAGACCCAGCCTCCCCTaGAATGAGCATGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQRPSLP*NEHGSV
Trigger: CACTGAGCCATGCTCATTGCAGGGGAGGCTGGGTCT...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAAGACCCAGCCTCCCCTaGAATGAGCATGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSRPSLP*NEHGSV
Trigger: CACTGAGCCATGCTCATTGCAGGGGAGGCTGGGTCT...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACAAAGAGCTGGGAGGGGTaGCACTGTTTGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRTAQQPATRVGMQYTHTKSWEG*HCLPSW
Trigger: CCAGCTGGGCAAACAGTGGCACCCCTCCCAGCTCTT...TGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTGCGTGTGCGGGTAGCTaGCCAGCAGCCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSACAGS*PAAAAG
Trigger: CCCTGCTGCGGCTGCTGGCCAGCTACCCGCACACGC...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTGTGGCAAACCAGAAGTaGACAGGACGCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGVANQK*TGRTLF
Trigger: GAACAAGGTGCGTCCTGTCCACTTCTGGTTTGCCAC...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGAGCGTCACCTGCTCGTaGAGCTCCGAGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPSVTCS*SSEVGT
Trigger: GGTGCCCACCTCGGAGCTCCACGAGCAGGTGACGCT...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAGGGTACAGGTGGCAGTaGATGGAGCGGAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGGYRWQ*MERNLD
Trigger: ATCCAGGTTCCGCTCCATCCACTGCCACCTGTACCC...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCACCCACTCAGAAGAGCTaGGAGGGGTGCCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSPTQKS*EGCHCL
Trigger: CAAACAGTGGCACCCCTCCCAGCTCTTCTGAGTGGG...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACCAGACACGCCCACTGTaGGCGACTTGCTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHQTRPL*ATCSLL
Trigger: AAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTG...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCACAGGTGAGCCATGCTaGGCCCAGCGGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PNRIALGVASDTQILPPSTGEPC*AQRGGG
Trigger: GCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGT...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACGTAGGACCTGAGAGCTaGTGTTGGGCTCCACTCATC +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHVGPES*CWAPLI
Trigger: GATGAGTGGAGCCCAACACCAGCTCTCAGGTCCTAC...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR TCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCGCCGTATTCATGAAGTaGCCCCCGCTGGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: PNRIALGVASDTQILPPSAVFMK*PPLAHG
Trigger: CCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGC...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGCTCAGCCGTATTCATaGAGTGACCCCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPAQPYS*SDPRWP
Trigger: GGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGC...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGTCGTACTTGGGGCTATaGCACAGGGGCCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGSYLGL*HRGQDF
Trigger: GAAGTCCTGGCCCCTGTGTCATAGCCCCAAGTACGA...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACATGAGCATGGCTCAGTaGGTCGTACTTGGGGCTATG +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHMSMAQ*VVLGAM
Trigger: CATAGCCCCAAGTACGACTCACTGAGCCATGCTCAT...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCTGTCCAGGCTGGGCTTaGCGACGTAGACGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: PNRIALGVASDTQILPPSCPGWA*RRRRPA
Trigger: CGCGGGACGTCTACGTCGGCAAGCCCAGCCTGGACA...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGTCCGAGGTGGGCACCTaGTGCAGGTTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPSEVGT*CRFSRW
Trigger: CCACCTGGAGAACCTGCAGCAGGTGCCCACCTCGGA...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCACCACTGTGGGCGACTTaGTCTCTACTTTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SNAEARAAQQGPWALWIPPLWAT*SLLWRG
Trigger: TCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGG...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGCATAAATACACAGAGTaGCAGACAGTCCCACTTCAG +
Preference number: 4 (lower is better)
Translates to: GASNAEARAAQQGPWALWHKYTE*QTVPLQ
Trigger: CTGAAGTGGGACTGTCTGGCACTCTGTGTATTTATG...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTGGGACAGGTGAGCCATaGTGGGCCCAGCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSGTGEP*WAQRGG
Trigger: ACCTCCCCGCTGGGCCCAGCATGGCTCACCTGTCCC...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACATCGAGGCGCGCGCGGTaGAACTTTTTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTSRRAR*NFLVVL
Trigger: CAAGACCACCAAAAAGTTCCACCGCGCGCGCCTCGA...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR CCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACGTGGCAAACCAGAAGTaGACAGGACGCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHVANQK*TGRTLF
Trigger: GAACAAGGTGCGTCCTGTCCACTTCTGGTTTGCCAC...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCAAGGGCCCCTTCACGTaGACGGCGTTCCGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPKGPFT*TAFRLF
Trigger: AAACAAGCGGAACGCCGTCCACGTGAAGGGGCCCTT...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACAACAGGTGGCAGTGGATaGAGCGGAACCTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTTGGSG*SGTWMG
Trigger: ACCCATCCAGGTTCCGCTCCATCCACTGCCACCTGT...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACAAGCCTGCTACCCGGGTaGGCATGCAGTACACACACA +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTSLLPG*ACSTHT
Trigger: TGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCT...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PNRIALGVASDTQILPPSASWGH*NWAVAA
Trigger: AGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGC...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGCACTGTTTGCCCAGCTaGACAGCCAGCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPHCLPS*TASHWG
Trigger: CCCCCAGTGGCTGGCTGTCCAGCTGGGCAAACAGTG...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTGCCGTATTCATGAAGTaGCCCCCGCTGGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSAVFMK*PPLAHG
Trigger: CCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGC...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGATGAGCATGGCTCAGTaGGTCGTACTTGGGGCTATG +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQMSMAQ*VVLGAM
Trigger: CATAGCCCCAAGTACGACTCACTGAGCCATGCTCAT...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGCAGCCTCCCCTGCAATaGGCATGGCTCAGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPQPPLQ*AWLSES
Trigger: CGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTG...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCGTTCATCCATCCCTCTaGGCTTTGGGTCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPVHPSL*ALGPCG
Trigger: GCCACAAGGACCCAAAGCTCAGAGGGATGGATGAAC...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR GCA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCCCTCCAAGCAGGCCCTaGAGCCCACTGGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: ARSPVAVERSKNPNRIALPPSRP*SPLALG
Trigger: TCCGAGGGCCAGTGGGCTGCAGGGCCTGCTTGGAGG...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCTGGGCCTGTCCAGGCTaGGCTTGCCGACGTAGACGT +
Preference number: 4 (lower is better)
Translates to: PNRIALGVASDTQILPPSWACPG*ACRRRR
Trigger: ACGTCTACGTCGGCAAGCCCAGCCTGGACAGGCCCA...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCGTCACCTGCTCGTaGAGCTCCGAGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSSVTCS*SSEVGT
Trigger: GGTGCCCACCTCGGAGCTCCACGAGCAGGTGACGCT...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCGCACATAAGTGGCGCTaGTGCCCGCCCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: PNRIALGVASDTQILPPSAHKWR*CPPLHR
Trigger: TCTGTGGAGGGGCGGGCACCAGCGCCACTTATGTGC...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSAEAHK*RWCPPL
Trigger: GAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGC...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACAGAATTGCCCTCGGAGTaGCCTCCGACACACAAATCC +
Preference number: 4 (lower is better)
Translates to: SRTAQQPATRVGMQYTHTELPSE*PPTHKS
Trigger: GGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTC...TGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGTCAGTGAGTCGTACTTaGGGCTATGACACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGSVSRT*GYDTGA
Trigger: GGCCCCTGTGTCATAGCCCCAAGTACGACTCACTGA...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSASWGH*NWAVAA
Trigger: AGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGC...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAACAGACACGCCCACTGTaGGCGACTTGCTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEQTRPL*ATCSLL
Trigger: AAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTG...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACGCACCTTGTTCTCGCTaGCCCGCTCCATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRFQMLERINTQSARQSHAPCSR*PAPWPG
Trigger: TCCAGGCCATGGAGCGGGTCAGCGAGAACAAGGTGC...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGAGCCAGCCCACGGCTaGTGCAGAAGCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SQYLQTRPLWATCSLLWREPAHG*CRSQRR
Trigger: GCGGCGCTGGCTTCTGCATCAGCCGTGGGCTGGCTC...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACAATGAGCATGGCTCAGTaGGTCGTACTTGGGGCTATG +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTMSMAQ*VVLGAM
Trigger: CATAGCCCCAAGTACGACTCACTGAGCCATGCTCAT...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGAGGAGATTAAATGCTaGGCTCTGACTCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSEEIKC*ALTHPV
Trigger: GACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTC...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCAGCCCACGGGACAGGTaGGCCATGCTGGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASSPRDR*AMLGPA
Trigger: CGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCT...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGAACACTTCAATTCCCTaGGAACTTTTCCCTTATCAT +
Preference number: 4 (lower is better)
Translates to: HTHRHGPRGASNAEARAANTSIP*ELFPYH
Trigger: ATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTT...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTTCCGAGGTGGGCACCTaGTGCAGGTTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSSEVGT*CRFSRW
Trigger: CCACCTGGAGAACCTGCAGCAGGTGCCCACCTCGGA...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACCACTGTGGGCGACTTaGTCTCTACTTTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SRTAQQPATRVGMQYTHTPLWAT*SLLWRG
Trigger: TCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGG...TGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTAGCGCCTGGCGGCTGTaGGCGGCCGAGCAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLSAWRL*AAEQFV
Trigger: CACAAACTGCTCGGCCGCCCACAGCCGCCAGGCGCT...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTTGGGCCTGTCCAGGCTaGGCTTGCCGACGTAGACGT +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSWACPG*ACRRRR
Trigger: ACGTCTACGTCGGCAAGCCCAGCCTGGACAGGCCCA...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCGTGGCAAACCAGAAGTaGACAGGACGCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QEEKGTYASHPCKVARSPVANQK*TGRTLF
Trigger: GAACAAGGTGCGTCCTGTCCACTTCTGGTTTGCCAC...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACCGTGGAGCTCCGAGGTaGGCACCTGCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GRFQMLERINTQSARQSHRGAPR*APAAGS
Trigger: AGAACCTGCAGCAGGTGCCCACCTCGGAGCTCCACG...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGAAGGGCCCCTTCACGTaGACGGCGTTCCGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPKGPFT*TAFRLF
Trigger: AAACAAGCGGAACGCCGTCCACGTGAAGGGGCCCTT...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACGGAGCGGAACCTGGATaGGTCGGCCTCCACCGAGAA +
Preference number: 4 (lower is better)
Translates to: GRFQMLERINTQSARQSHGAEPG*VGLHRE
Trigger: TTCTCGGTGGAGGCCGACCCATCCAGGTTCCGCTCC...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGGGTACAGGTGGCAGTaGATGGAGCGGAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPGYRWQ*MERNLD
Trigger: ATCCAGGTTCCGCTCCATCCACTGCCACCTGTACCC...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGAGCCTGCTACCCGGGTaGGCATGCAGTACACACACA +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPSLLPG*ACSTHT
Trigger: TGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCT...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGCCCTGCAGCCCACTaGCCCTCGGAGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRGPAAH*PSEQRH
Trigger: GTGCCTCTGCTCCGAGGGCCAGTGGGCTGCAGGGCC...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACAACTGGAACTGGGCGGTaGCTGCTGTTACTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTTGTGR*LLLLLS
Trigger: GCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGT...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTCCACTGGGGGCTTCGTaGGGCCACTGGAACTGGGCG +
Preference number: 4 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLPLGAS*GHWNWA
Trigger: CGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGG...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCTGGACAGCCAGCCACTaGGGGCTTCGTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: ARSPVAVERSKNPNRIALWTASH*GLRGAT
Trigger: AGTGGCCCCACGAAGCCCCCAGTGGCTGGCTGTCCA...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTGGCCAGGAGCCGCCTTaGCCTCTGTCCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLGQEPP*PLSSLL
Trigger: GAGGAGGGAGGACAGAGGCCAAGGCGGCTCCTGGCC...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR TCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACGCAGGGCCCGCAGGTTaGCGTAGTTGTCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: GRFQMLERINTQSARQSHAGPAG*RSCHRP
Trigger: TGGACGATGACAACTACGTCAACCTGCGGGCCCTGC...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTGCCGTATTCATGAAGTaGCCCCCGCTGGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLAVFMK*PPLAHG
Trigger: CCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGC...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCACCACGTTGCCCGTGTaGCTGGCCAGGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: ARSPVAVERSKNPNRIALTTLPV*LARASS
Trigger: AGATGAGGCCCTGGCCAGGCACACGGGCAACGTGGT...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTACGCATCGCATCCCTaGAAAGTAGCCCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRFQMLERINTQSARQSHYASHP*KVARSP
Trigger: GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTA...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGCTCCATGCCCAGATCTaGTTGGCACTCATACAATAC +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQLHAQI*LALIQY
Trigger: GTATTGTATGAGTGCCAAGCAGATCTGGGCATGGAG...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAACCCGCTCCATGGCCTaGATGGGCCTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKTRSMA*MGLSRL
Trigger: CAGCCTGGACAGGCCCATCCAGGCCATGGAGCGGGT...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTGGATGGAGCGGAACCTaGATGGGTCGGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLGWSGT*MGRPPP
Trigger: CGGTGGAGGCCGACCCATCCAGGTTCCGCTCCATCC...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGATTGGGTCTCAGCCATaGCCACTAGAAGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGIGSQP*PLEDGS
Trigger: ACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAAT...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTGGGGCGCCCAGGGATTaGGTCTCAGCCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLGAPRD*VSAMAT
Trigger: AGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCC...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAGGGGCGCCCAGGGATTaGGTCTCAGCCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKGAPRD*VSAMAT
Trigger: AGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCC...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRGPWAL*IPGAPR
Trigger: CCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACC...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCCCACTGGGGGCTTCGTaGGGCCACTGGAACTGGGCG +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASPLGAS*GHWNWA
Trigger: CGCCCAGTTCCAGTGGCCCCACGAAGCCCCCAGTGG...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGCAGACACGCCCACTGTaGGCGACTTGCTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPQTRPL*ATCSLL
Trigger: AAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTG...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCACAGGTGAGCCATGCTaGGCCCAGCGGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASTGEPC*AQRGGG
Trigger: GCCACCTCCCCGCTGGGCCCAGCATGGCTCACCTGT...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACCCCTCCTCCCTTCCTTaGGAGGCTCTGCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: GRFQMLERINTQSARQSHPSSLP*EALPVL
Trigger: CAACACTGGCAGAGCCTCCCAAGGAAGGGAGGAGGG...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR TCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTGCACCTTGTTCTCGCTaGCCCGCTCCATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLAPCSR*PAPWPG
Trigger: TCCAGGCCATGGAGCGGGTCAGCGAGAACAAGGTGC...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp TGCTGCAAAGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACAGAGCCAGCCCACGGCTaGTGCAGAAGCCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: CCKEHLYSQQKDVTIATTEPAHG*CRSQRR
Trigger: GCGGCGCTGGCTTCTGCATCAGCCGTGGGCTGGCTC...TGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCTTTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222725.10
ENST00000402045.5
CDS-3UTR GCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCTGTCCAGGCTGGGCTTaGCGACGTAGACGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASCPGWA*RRRRPA
Trigger: CGCGGGACGTCTACGTCGGCAAGCCCAGCCTGGACA...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCTCCACAGAGCAGAACTaGCCAGCAGCCTGCTACCCG +
Preference number: 4 (lower is better)
Translates to: ARSPVAVERSKNPNRIALSTEQN*PAACYP
Trigger: CGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGTGGA...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTCATAAGTGGCGCTGGTaGCCGCCCCTCCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLHKWRW*PPLHRA
Trigger: TGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATG...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTTGGGCCTGTCCAGGCTaGGCTTGCCGACGTAGACGT +
Preference number: 4 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLWACPG*ACRRRR
Trigger: ACGTCTACGTCGGCAAGCCCAGCCTGGACAGGCCCA...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAGGAGCGGAACCTGGATaGGTCGGCCTCCACCGAGAA +
Preference number: 4 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKGAEPG*VGLHRE
Trigger: TTCTCGGTGGAGGCCGACCCATCCAGGTTCCGCTCC...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGATGGAGCGGAACCTaGATGGGTCGGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRGWSGT*MGRPPP
Trigger: CGGTGGAGGCCGACCCATCCAGGTTCCGCTCCATCC...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCGGATGGAGCGGAACCTaGATGGGTCGGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASGWSGT*MGRPPP
Trigger: CGGTGGAGGCCGACCCATCCAGGTTCCGCTCCATCC...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGATGCCCAGATCTGCTTaGCACTCATACAATACGTGT +
Preference number: 4 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQMPRSA*HSYNTC
Trigger: ACACGTATTGTATGAGTGCCAAGCAGATCTGGGCAT...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR TCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCGCTCAGCCGTATTCATaGAGTGACCCCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASAQPYS*SDPRWP
Trigger: GGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGC...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCTCGTACTTGGGGCTATaGCACAGGGGCCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: ARSPVAVERSKNPNRIALSYLGL*HRGQDF
Trigger: GAAGTCCTGGCCCCTGTGTCATAGCCCCAAGTACGA...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACATCCCACAGCCTTCCTaGGCATTTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: GRFQMLERINTQSARQSHIPQPS*AFAPCP
Trigger: TGGGCATGGAGCAAATGCTCAGGAAGGCTGTGGGAT...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR GCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCACCACGTTGCCCGTGTaGCTGGCCAGGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASTTLPV*LARASS
Trigger: AGATGAGGCCCTGGCCAGGCACACGGGCAACGTGGT...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACATAAATACACAGAGTaGCAGACAGTCCCACTTCAG +
Preference number: 4 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTHKYTE*QTVPLQ
Trigger: CTGAAGTGGGACTGTCTGGCACTCTGTGTATTTATG...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCCGTGGAGCTCCGAGGTaGGCACCTGCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASRGAPR*APAAGS
Trigger: AGAACCTGCAGCAGGTGCCCACCTCGGAGCTCCACG...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCACAGGTGGCAGTGGATaGAGCGGAACCTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: ARSPVAVERSKNPNRIALTGGSG*SGTWMG
Trigger: ACCCATCCAGGTTCCGCTCCATCCACTGCCACCTGT...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAGTGTCCGGGTACAGGTaGCAGTGGATGGAGCGGAAC +
Preference number: 4 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKVSGYR*QWMERN
Trigger: GTTCCGCTCCATCCACTGCCACCTGTACCCGGACAC...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGACAGGAGGAAGGGGATTaGGTCACGCACCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRQEEGD*VTHPQT
Trigger: GGTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTG...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAATGGGGCCACTGGAACTaGGCGGTGGCTGCTGTTACT +
Preference number: 4 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKWGHWN*AVAAVT
Trigger: AGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCA...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCTCCTGCCGGACTCGATaGAGCGGTCATACTCCACGG +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASSCRTR*SGHTPR
Trigger: CCGTGGAGTATGACCGCTTCATCGAGTCCGGCAGGA...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACAACACTTCAATTCCCTaGGAACTTTTCCCTTATCAT +
Preference number: 4 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHNTSIP*ELFPYH
Trigger: ATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTT...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCTACGCATCGCATCCCTaGAAAGTAGCCCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASYASHP*KVARSP
Trigger: GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTA...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTGCCTTCCTGAGCATTTaGTCCATGCCCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSAFLSI*SMPRSA
Trigger: AGCAGATCTGGGCATGGAGCAAATGCTCAGGAAGGC...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTTTGCAGGACAGCGCCTaGCGGCTGTGGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSILQDSA*RLWAAE
Trigger: CTCGGCCGCCCACAGCCGCCAGGCGCTGTCCTGCAA...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAAAGGGCCCCTTCACGTaGACGGCGTTCCGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKKGPFT*TAFRLF
Trigger: AAACAAGCGGAACGCCGTCCACGTGAAGGGGCCCTT...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAACAGGTGGCAGTGGATaGAGCGGAACCTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKTGGSG*SGTWMG
Trigger: ACCCATCCAGGTTCCGCTCCATCCACTGCCACCTGT...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCGTGTCCGGGTACAGGTaGCAGTGGATGGAGCGGAAC +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASVSGYR*QWMERN
Trigger: GTTCCGCTCCATCCACTGCCACCTGTACCCGGACAC...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGCTGCAAAGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACAGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CCKEHLYSQQKDVTIATTAEAHK*RWCPPL
Trigger: GAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGC...TGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCTTTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222725.10
ENST00000402045.5
CDS-3UTR CCA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACACTGGAACTGGGCGGTaGCTGCTGTTACTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: GRFQMLERINTQSARQSHTGTGR*LLLLLS
Trigger: GCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGT...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTACTGGAACTGGGCGGTaGCTGCTGTTACTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: SLWSAGRERHLRIASLQSTGTGR*LLLLLS
Trigger: GCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGT...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGATGGGGCCACTGGAACTaGGCGGTGGCTGCTGTTACT +
Preference number: 4 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRWGHWN*AVAAVT
Trigger: AGTAACAGCAGCCACCGCCCAGTTCCAGTGGCCCCA...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAAGACAGCAGCGACCTaGTGTCATTCAGACCTGCTT +
Preference number: 4 (lower is better)
Translates to: PNRIALGVASDTQILPPSKTAAT*CHSDLL
Trigger: AAGCAGGTCTGAATGACACCAGGTCGCTGCTGTCTT...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402045.5
CDS-3UTR TCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGCCCACGGGACAGGTaGGCCATGCTGGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQSPRDR*AMLGPA
Trigger: CGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCT...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAAACACTTCAATTCCCTaGGAACTTTTCCCTTATCAT +
Preference number: 4 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSNTSIP*ELFPYH
Trigger: ATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTT...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGCATAAATACACAGAGTaGCAGACAGTCCCACTTCAG +
Preference number: 4 (lower is better)
Translates to: WSAGRERHLRIASLQSSPHKYTE*QTVPLQ
Trigger: CTGAAGTGGGACTGTCTGGCACTCTGTGTATTTATG...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIGPWAL*IPGAPR
Trigger: CCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACC...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCACTGGAACTGGGCGGTaGCTGCTGTTACTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: ARSPVAVERSKNPNRIALTGTGR*LLLLLS
Trigger: GCTTAAGAGTAACAGCAGCCACCGCCCAGTTCCAGT...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCCCCACTCAGAAGAGCTaGGAGGGGTGCCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASPTQKS*EGCHCL
Trigger: CAAACAGTGGCACCCCTCCCAGCTCTTCTGAGTGGG...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCGCACCTTGTTCTCGCTaGCCCGCTCCATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VTIATTLQFPENFSLIIRAPCSR*PAPWPG
Trigger: TCCAGGCCATGGAGCGGGTCAGCGAGAACAAGGTGC...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTGCCGTATTCATGAAGTaGCCCCCGCTGGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIAVFMK*PPLAHG
Trigger: CCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGC...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAATGAGCATGGCTCAGTaGGTCGTACTTGGGGCTATG +
Preference number: 4 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKMSMAQ*VVLGAM
Trigger: CATAGCCCCAAGTACGACTCACTGAGCCATGCTCAT...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGCGCCTGGCGGCTGTaGGCGGCCGAGCAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQSAWRL*AAEQFV
Trigger: CACAAACTGCTCGGCCGCCCACAGCCGCCAGGCGCT...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAGTGGCAAACCAGAAGTaGACAGGACGCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKVANQK*TGRTLF
Trigger: GAACAAGGTGCGTCCTGTCCACTTCTGGTTTGCCAC...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTGGGGCGCCCAGGGATTaGGTCTCAGCCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIGAPRD*VSAMAT
Trigger: AGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCC...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCGAATTGCCCTCGGAGTaGCCTCCGACACACAAATCC +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASELPSE*PPTHKS
Trigger: GGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTC...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCTCAGTGAGTCGTACTTaGGGCTATGACACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASSVSRT*GYDTGA
Trigger: GGCCCCTGTGTCATAGCCCCAAGTACGACTCACTGA...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIASWGH*NWAVAA
Trigger: AGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGC...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTGCACCTTGTTCTCGCTaGCCCGCTCCATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIAPCSR*PAPWPG
Trigger: TCCAGGCCATGGAGCGGGTCAGCGAGAACAAGGTGC...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAAGCGTGTGCGGGTAGCTaGCCAGCAGCCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKACAGS*PAAAAG
Trigger: CCCTGCTGCGGCTGCTGGCCAGCTACCCGCACACGC...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAACCCGCTCCATGGCCTaGATGGGCCTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQTRSMA*MGLSRL
Trigger: CAGCCTGGACAGGCCCATCCAGGCCATGGAGCGGGT...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTGGAGCGGAACCTGGATaGGTCGGCCTCCACCGAGAA +
Preference number: 4 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIGAEPG*VGLHRE
Trigger: TTCTCGGTGGAGGCCGACCCATCCAGGTTCCGCTCC...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TGCTGCAAAGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACAGGGTACAGGTGGCAGTaGATGGAGCGGAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: CCKEHLYSQQKDVTIATTGYRWQ*MERNLD
Trigger: ATCCAGGTTCCGCTCCATCCACTGCCACCTGTACCC...TGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCTTTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222725.10
ENST00000402045.5
CDS-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAGCAGAGGCACATAAGTaGCGCTGGTGCCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQAEAHK*RWCPPL
Trigger: GAGGGGCGGGCACCAGCGCCACTTATGTGCCTCTGC...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGATCTCCACGCAGCAGCTaGACAACTAGGATCATAGCC +
Preference number: 4 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRSPRSS*TTRIIA
Trigger: GGCTATGATCCTAGTTGTCCAGCTGCTGCGTGGAGA...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402045.5
CDS-3UTR TCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGAGGAGATTAAATGCTaGGCTCTGACTCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: SQYLQTRPLWATCSLLWREEIKC*ALTHPV
Trigger: GACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTC...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAATCCGAGGTGGGCACCTaGTGCAGGTTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQSEVGT*CRFSRW
Trigger: CCACCTGGAGAACCTGCAGCAGGTGCCCACCTCGGA...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAACCTCCAAGCAGGCCCTaGAGCCCACTGGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKPPSRP*SPLALG
Trigger: TCCGAGGGCCAGTGGGCTGCAGGGCCTGCTTGGAGG...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCCATAAATACACAGAGTaGCAGACAGTCCCACTTCAG +
Preference number: 4 (lower is better)
Translates to: ARSPVAVERSKNPNRIALHKYTE*QTVPLQ
Trigger: CTGAAGTGGGACTGTCTGGCACTCTGTGTATTTATG...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAACGTGGAGCTCCGAGGTaGGCACCTGCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQRGAPR*APAAGS
Trigger: AGAACCTGCAGCAGGTGCCCACCTCGGAGCTCCACG...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCATTGGGTCTCAGCCATaGCCACTAGAAGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: VAVERSKNPNRIALGVASIGSQP*PLEDGS
Trigger: ACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAAT...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAAGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKGPWAL*IPGAPR
Trigger: CCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACC...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAGCGCAACAGGGTCCCTaGGCCCTTTGGATACCAGGG +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQAQQGP*ALWIPG
Trigger: CCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAATCCTGCCGGACTCGATaGAGCGGTCATACTCCACGG +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQSCRTR*SGHTPR
Trigger: CCGTGGAGTATGACCGCTTCATCGAGTCCGGCAGGA...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAATGTCCAGGCTGGGCTTaGCGACGTAGACGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKCPGWA*RRRRPA
Trigger: CGCGGGACGTCTACGTCGGCAAGCCCAGCCTGGACA...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCAACGTCATCTCCTTGTaGCGCGAGATCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VTIATTLQFPENFSLIIRNVISL*REIQVS
Trigger: GGAGACCTGGATCTCGCGCCACAAGGAGATGACGTT...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAGTGTCCGGGTACAGGTaGCAGTGGATGGAGCGGAAC +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQVSGYR*QWMERN
Trigger: GTTCCGCTCCATCCACTGCCACCTGTACCCGGACAC...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCGAATTGCCCTCGGAGTaGCCTCCGACACACAAATCC +
Preference number: 4 (lower is better)
Translates to: VTIATTLQFPENFSLIIRELPSE*PPTHKS
Trigger: GGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTC...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAAGCTTCGTGGGGCCACTaGAACTGGGCGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKASWGH*NWAVAA
Trigger: AGCAGCCACCGCCCAGTTCCAGTGGCCCCACGAAGC...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAACATAAGTGGCGCTGGTaGCCGCCCCTCCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKHKWRW*PPLHRA
Trigger: TGCTCTGTGGAGGGGCGGGCACCAGCGCCACTTATG...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGTGTCATTCAGACCTaGTTTACTTATTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRGVIQT*FTYSPR
Trigger: GCGTGGAGAATAAGTAAAGCAGGTCTGAATGACACC...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402045.5
CDS-3UTR CCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTACAGGTGGCAGTGGATaGAGCGGAACCTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: TIATTLQFPENFSLIIRFTGGSG*SGTWMG
Trigger: ACCCATCCAGGTTCCGCTCCATCCACTGCCACCTGT...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAATGGCCACTAGAAGATaGCAGTGCGGGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQMATRR*QCGDTR
Trigger: CCTGGTGTCCCCGCACTGCCATCTTCTAGTGGCCAT...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAACCCACTCAGAAGAGCTaGGAGGGGTGCCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQPTQKS*EGCHCL
Trigger: CAAACAGTGGCACCCCTCCCAGCTCTTCTGAGTGGG...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
3UTR CAA 72 bp GTCACAATATTTACAGACACGCCCACTGTGGGCGACTaGCTCTCTACTTTGGAGAGGAGATTAAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: VTIFTDTPTVGD*LSTLERRLNAE
Trigger: CTCAGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAACAGCCTCCCCTGCAATaGGCATGGCTCAGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKQPPLQ*AWLSES
Trigger: CGACTCACTGAGCCATGCTCATTGCAGGGGAGGCTG...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR GCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAAAAGAGCTGGGAGGGGTaGCACTGTTTGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKKSWEG*HCLPSW
Trigger: CCAGCTGGGCAAACAGTGGCACCCCTCCCAGCTCTT...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAACAGACACGCCCACTGTaGGCGACTTGCTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQQTRPL*ATCSLL
Trigger: AAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTG...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAATCGTACTTGGGGCTATaGCACAGGGGCCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKSYLGL*HRGQDF
Trigger: GAAGTCCTGGCCCCTGTGTCATAGCCCCAAGTACGA...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CCA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAAAGCCTGCTACCCGGGTaGGCATGCAGTACACACACA +
Preference number: 4 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKSLLPG*ACSTHT
Trigger: TGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCT...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTGAGGAGATTAAATGCTaGGCTCTGACTCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: TIATTLQFPENFSLIIRFEEIKC*ALTHPV
Trigger: GACAGGGTGAGTCAGAGCTCAGCATTTAATCTCCTC...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR TCA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTGTGAAGATGAACGTCTaGAGGAGAAAATCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TIATTLQFPENFSLIIRFVKMNV*RRKSAF
Trigger: GAAGGCCGATTTTCTCCTTCAGACGTTCATCTTCAC...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614382.1
CDS-3UTR TCA 90 bp TGCTGCAAAGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACAAACACTTCAATTCCCTaGGAACTTTTCCCTTATCAT +
Preference number: 4 (lower is better)
Translates to: CCKEHLYSQQKDVTIATTNTSIP*ELFPYH
Trigger: ATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTT...TGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCTTTGCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222725.10
ENST00000402045.5
CDS-3UTR TCA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAACACTTCAATTCCCTaGGAACTTTTCCCTTATCAT +
Preference number: 4 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQNTSIP*ELFPYH
Trigger: ATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTT...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS GCA 90 bp GCATGGTGGGGTGGCGGCCGCGCGGCGCGCCCTTCCCCGTGCGCCTaGCTTGCACCGACCCGAAGCCCGTCGCTCCGGCGGCGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: AWWGGGRAARPSPCA*LAPTRSPSLRRRSP
Trigger: TGGACTGCGCCGCCGGAGCGACGGGCTTCGGGTCGGTGCAAGGCAGGCGCACGGGGAAGGGCGCGCCGCGCGGCCGCCACCCCACCATGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS GCA 90 bp CCCGTCAGTGAAGATGAACGTCTGTGCCAGCACGCGGCCGCCCCCTaGCAGGAGCGCTCTGCGGAAGAGGAGGGGGCCGCCAGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PVSEDERLCQHAAAP*QERSAEEEGAARAG
Trigger: CCCCGCCCTGGCGGCCCCCTCCTCTTCCGCAGAGCGCTCCTGGCAGGGGGCGGCCGCGTGCTGGCACAGACGTTCATCTTCACTGACGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493850.1
CDS-3UTR CAA 90 bp TGTGGGGCGGCCGGACCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCATACTCCACGGCCATCTaGCAGGACAGCGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: CGAAGPTACLAWSLSASPYSTAI*QDSAWR
Trigger: CCGCCAGGCGCTGTCCTGCAAGATGGCCGTGGAGTA...TGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGGTCCGGCCGCCCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CAA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGCCAGGAGGAAGGGGATaGGGTCACGCACCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: HTHRHGPRGASNAEARAAPGGRG*GHAPPD
Trigger: GTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTGG...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGCCAGGAGGAAGGGGATaGGGTCACGCACCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGPGGRG*GHAPPD
Trigger: GTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTGG...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CCCACGGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTTTGTGATGACCACGTaGCCCGTGTGCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PTACLAWSLSASPAHQHGFVMTT*PVCLAR
Trigger: CCTGGCCAGGCACACGGGCAACGTGGTCATCACAAA...GCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCCGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CAA 90 bp GGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGCTGTGGACAGGACGCACCTaGTTCTCGCTGACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GLPGLESERLPSPPAWLLWTGRT*FSLTRS
Trigger: GGAGCGGGTCAGCGAGAACAAGGTGCGTCCTGTCCA...CAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CAA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATGGACAGGACGCACCTaGTTCTCGCTGACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGWTGRT*FSLTRS
Trigger: GGAGCGGGTCAGCGAGAACAAGGTGCGTCCTGTCCA...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: SNAEARAAQQGPWALWIPGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...TGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS CCA 90 bp TCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTaGATACCAGGGGCGCCCAGGGATTGGGTCTCAGCCATGGCCACT +
Preference number: 5 (lower is better)
Translates to: SNAEARAAQQGPWAL*IPGAPRDWVSAMAT
Trigger: AGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS CCA 90 bp GGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATaGCTGCTGGACCTTGGGCATCAGCTGCTCCGTGCCTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: GLPGLESERLPSPPA*LLDLGHQLLRASVS
Trigger: GGAAACTGAGGCACGGAGCAGCTGATGCCCAAGGTCCAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CAA 90 bp GGAGCCTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGTTTGTGATGACCACGTaGCCCGTGTGCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GASNAEARAAQQGPWALWFVMTT*PVCLAR
Trigger: CCTGGCCAGGCACACGGGCAACGTGGTCATCACAAA...CCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACACACACACGCACAGGGGCGCCCAGGGATaGGGTCTCAGCCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: AQQPATRVGMQYTHTHTHRGAQG*GLSHGH
Trigger: GTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCT...GTGCGTGTGTGTGTGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGCCCACTGTGGGCGACTaGCTCTCTACTTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: PGQRNRVPGPFGYQGRPGPTVGD*LSTLER
Trigger: CCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGG...CCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS CCA 90 bp GGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCTCAGCCATaGCCACTAGAAGATGGCAGTGCGGGGACACCAGGGTGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: GPFGYQGRPGIGSQP*PLEDGSAGTPGCVR
Trigger: CCGGACACACCCTGGTGTCCCCGCACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAAGGGGCGCCCAGGGATaGGGTCTCAGCCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSRGAQG*GLSHGH
Trigger: GTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCT...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: QEEKGTYASHPCKVARSPGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CAGGGCAGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGACCCCCAGCACAGAGCTaGTGGTCAGCAGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: QGSATGSLGPLDTRGAQGPPAQS*WSAGRE
Trigger: TTCTCTTCCTGCTGACCACAAGCTCTGTGCTGGGGG...TCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS GCA 90 bp GCGCCCAGGGATTGGGTCTCAGCCATGGCCACTAGAAGATGGCAGTaGGGGGACACCAGGGTGTGTCCGGGTACAGGTGGCAGTGGATGG +
Preference number: 5 (lower is better)
Translates to: APRDWVSAMATRRWQ*GDTRVCPGTGGSGW
Trigger: CCATCCACTGCCACCTGTACCCGGACACACCCTGGTGTCCCCGCACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAATCCCTGGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GGCCTGCCTGGCTTGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGCTGGCGCGGTGGAACTTTTaGGTGGTCTTGACAGCGATG +
Preference number: 5 (lower is better)
Translates to: GLPGLESERLPSPPAWLLARWNF*VVLTAM
Trigger: CATCGCTGTCAAGACCACCAAAAAGTTCCACCGCGC...CAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCAAGCCAGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS-3UTR CAA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGAGGGGCGCCCAGGGATaGGGTCTCAGCCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGRGAQG*GLSHGH
Trigger: GTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCT...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGAAAATCCTAACAGAATaGCCCTCGGAGTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: HTHRHGPRGASNAEARAAKILTE*PSEWPP
Trigger: CGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTT...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CACAGGGGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCACCAGGAGGAAGGGGATaGGGTCACGCACCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: HRGQDFRAQVPPAQSLWSPGGRG*GHAPPD
Trigger: GTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTGG...TGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCCCCACTGTGGGCGACTaGCTCTCTACTTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVPTVGD*LSTLER
Trigger: CCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGG...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCATGAACGTCATCTCCTaGTGGCGCGAGATCCAGGTC +
Preference number: 5 (lower is better)
Translates to: AQQGPWALWIPGAPRDWVMNVIS*WREIQV
Trigger: GACCTGGATCTCGCGCCACAAGGAGATGACGTTCAT...GACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR CAA 90 bp TGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCAGGCCCTGCAGTGGACAGGACGCACCTaGTTCTCGCTGACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: CPRSGLRHTNPSSKQALQWTGRT*FSLTRS
Trigger: GGAGCGGGTCAGCGAGAACAAGGTGCGTCCTGTCCA...CTGCAGGGCCTGCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGATGGACAGGACGCACCTaGTTCTCGCTGACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGWTGRT*FSLTRS
Trigger: GGAGCGGGTCAGCGAGAACAAGGTGCGTCCTGTCCA...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: WSAGRERHLRIASLQSSPGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCCCCCAGCACAGAGCTaGTGGTCAGCAGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGPPAQS*WSAGRE
Trigger: TTCTCTTCCTGCTGACCACAAGCTCTGTGCTGGGGG...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCCGCCGGCCGCAGCGCTaGAGCATGGTGGGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: ARSPVAVERSKNPNRIALRRPQR*SMVGWR
Trigger: CCGCCACCCCACCATGCTCAAGCGCTGCGGCCGGCG...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR CAA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCTGGACAGGACGCACCTaGTTCTCGCTGACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: QEEKGTYASHPCKVARSPWTGRT*FSLTRS
Trigger: GGAGCGGGTCAGCGAGAACAAGGTGCGTCCTGTCCA...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCCCCCGTGCGCCTGCCTaGCACCGACCCGAAGCCCGT +
Preference number: 5 (lower is better)
Translates to: ARSPVAVERSKNPNRIALPRAPA*HRPEAR
Trigger: ACGGGCTTCGGGTCGGTGCAAGGCAGGCGCACGGGG...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR CAA 90 bp GCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAATTTGTGATGACCACGTaGCCCGTGTGCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ARTSGHRYPQHRACGQQEFVMTT*PVCLAR
Trigger: CCTGGCCAGGCACACGGGCAACGTGGTCATCACAAA...TTCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp TGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGTACTCCACGGCCATCTaGCAGGACAGCGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: WSAGRERHLRIASLQSSPYSTAI*QDSAWR
Trigger: CCGCCAGGCGCTGTCCTGCAAGATGGCCGTGGAGTA...CGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGCTGAGCTTTGGGTCCTaGTGGCCAGGGAGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGLSFGS*WPGREE
Trigger: TTCCTCCCTCCCTGGCCACAAGGACCCAAAGCTCAG...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR CAA 90 bp GGCCAGGACTTCAGGGCACAGGTACCCCCAGCACAGAGCTTGTGGTCAGCAGGAGCGCGGTGGAACTTTTaGGTGGTCTTGACAGCGATG +
Preference number: 5 (lower is better)
Translates to: GQDFRAQVPPAQSLWSAGARWNF*VVLTAM
Trigger: CATCGCTGTCAAGACCACCAAAAAGTTCCACCGCGC...TCCTGCTGACCACAAGCTCTGTGCTGGGGGTACCTGTGCCCTGAAGTCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS-3UTR CAA 90 bp CACACGCACAGGCACGGCCCTAGGGGAGCCTCGAATGCCGAGGCCAGGGCAGCGGACTTGCTCTCTACTTaGGAGAGGAGATTAAATGCT +
Preference number: 5 (lower is better)
Translates to: HTHRHGPRGASNAEARAADLLST*ERRLNA
Trigger: AGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTC...CGCTGCCCTGGCCTCGGCATTCGAGGCTCCCCTAGGGCCGTGCCTGTGCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACACCCACTGTGGGCGACTaGCTCTCTACTTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTPTVGD*LSTLER
Trigger: CCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGG...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp AGCGCAACAGGGTCCCTGGGCCCTTTGGATACCAGGGGCGCCCAGGGATTGGGTCATGCCCAGATCTGCTaGGCACTCATACAATACGTG +
Preference number: 5 (lower is better)
Translates to: SATGSLGPLDTRGAQGLGHAQIC*ALIQYV
Trigger: CACGTATTGTATGAGTGCCAAGCAGATCTGGGCATG...ACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR CAA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTACTCCACGGCCATCTaGCAGGACAGCGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GRFQMLERINTQSARQSHYSTAI*QDSAWR
Trigger: CCGCCAGGCGCTGTCCTGCAAGATGGCCGTGGAGTA...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS CCA 90 bp CGTCTGCTGAGAGAGGCCACCTCCGTAGGACCTGAGAGCTGGTGTTaGGCTCCACTCATCCATCCATCCATCCATCCATCCATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RLLREATSVGPESWC*APLIHPSIHPSICP
Trigger: TGGACAGATGGATGGATGGATGGATGGATGGATGAGTGGAGCCCAACACCAGCTCTCAGGTCCTACGGAGGTGGCCTCTCTCAGCAGACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR CAA 90 bp ACAGAGCAGAACTGCCCAGCAGCCTGCTACCCGGGTGGGCATGCAGTACACACAAAAATCCTAACAGAATaGCCCTCGGAGTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: TEQNCPAACYPGGHAVHTKILTE*PSEWPP
Trigger: CGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTT...TGTGTGTACTGCATGCCCACCCGGGTAGCAGGCTGCTGGGCAGTTCTGCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS TCA 90 bp GCCAGGGCCTCATCTTCCCCGTCAGTGAAGATGAACGTCTCTACCTaGATGTCAGCCGCAAGACAGCAGCGACCTGGTGTCATTCAGACC +
Preference number: 5 (lower is better)
Translates to: ARASSSPSVKMNVST*MSAARQQRPGVIQT
Trigger: GGTCTGAATGACACCAGGTCGCTGCTGTCTTGCGGCTGACATTCAGGTAGAGACGTTCATCTTCACTGACGGGGAAGATGAGGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402045.5
CDS CCA 90 bp GATGAACGTCTGCTGAGAGAGGCCACCTCCGTAGGACCTGAGAGCTaGTGTTGGGCTCCACTCATCCATCCATCCATCCATCCATCCATC +
Preference number: 5 (lower is better)
Translates to: DERLLREATSVGPES*CWAPLIHPSIHPSI
Trigger: GATGGATGGATGGATGGATGGATGGATGAGTGGAGCCCAACACCAGCTCTCAGGTCCTACGGAGGTGGCCTCTCTCAGCAGACGTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR CAA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTTGTGATGACCACGTaGCCCGTGTGCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GRFQMLERINTQSARQSHFVMTT*PVCLAR
Trigger: CCTGGCCAGGCACACGGGCAACGTGGTCATCACAAA...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp AGCTTGTGGTCAGCAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTTTTGTGATGACCACGTaGCCCGTGTGCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SLWSAGRERHLRIASLQSFVMTT*PVCLAR
Trigger: CCTGGCCAGGCACACGGGCAACGTGGTCATCACAAA...ACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTGCTGACCACAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACTTTACTCCACGGCCATCTaGCAGGACAGCGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: EVPDAGTHKYTECQTVPLYSTAI*QDSAWR
Trigger: CCGCCAGGCGCTGTCCTGCAAGATGGCCGTGGAGTA...AAGTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCAGGGGCGCCCAGGGATaGGGTCTCAGCCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: VAVERSKNPNRIALGVASRGAQG*GLSHGH
Trigger: GTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCT...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CCTAACAGAATTGCCCTCGGAGTGGCCTCCGACACACAAATCCTTCCTCCAAGCCCCCCAGCACAGAGCTaGTGGTCAGCAGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: PNRIALGVASDTQILPPSPPAQS*WSAGRE
Trigger: TTCTCTTCCTGCTGACCACAAGCTCTGTGCTGGGGG...GCTTGGAGGAAGGATTTGTGTGTCGGAGGCCACTCCGAGGGCAATTCTGTTAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCGGAGTGGCCTCCCCAGGAGGAAGGGGATaGGGTCACGCACCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: VAVERSKNPNRIALGVASPGGRG*GHAPPD
Trigger: GTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTGG...GGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp TGCTGCAAAGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACAAGGGGCGCCCAGGGATaGGGTCTCAGCCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: CCKEHLYSQQKDVTIATTRGAQG*GLSHGH
Trigger: GTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCT...TGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCTTTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222725.10
ENST00000402045.5
CDS-3UTR CAA 90 bp GCCCGGAGCCCCGTAGCTGTAGAAAGATCCAAAAATCCTAACAGAATTGCCCTCCCCCCAGCACAGAGCTaGTGGTCAGCAGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: ARSPVAVERSKNPNRIALPPAQS*WSAGRE
Trigger: TTCTCTTCCTGCTGACCACAAGCTCTGTGCTGGGGG...GAGGGCAATTCTGTTAGGATTTTTGGATCTTTCTACAGCTACGGGGCTCCGGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GGGAGGTTCCAGATGCTGGAACGCATAAATACACAGAGTGCCAGACAGTCCCACAAAATCCTAACAGAATaGCCCTCGGAGTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: GRFQMLERINTQSARQSHKILTE*PSEWPP
Trigger: CGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTT...GTGGGACTGTCTGGCACTCTGTGTATTTATGCGTTCCAGCATCTGGAACCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp TGCTGCAAAGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACCAGGAGGAAGGGGATaGGGTCACGCACCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: CCKEHLYSQQKDVTIATTPGGRG*GHAPPD
Trigger: GTCTGGGGGTGCGTGACCCAATCCCCTTCCTCCTGG...TGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCTTTGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222725.10
ENST00000402045.5
CDS-3UTR CAA 90 bp AAACAACAAGAAACACAGCCCACGGGACAGGTGAGCCATGCTGGGCCCAGCGGGGACTTGCTCTCTACTTaGGAGAGGAGATTAAATGCT +
Preference number: 5 (lower is better)
Translates to: KQQETQPTGQVSHAGPSGDLLST*ERRLNA
Trigger: AGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTC...CCCGCTGGGCCCAGCATGGCTCACCTGTCCCGTGGGCTGTGTTTCTTGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp CAGGAAGAGAAAGGCACCTACGCATCGCATCCCTGCAAAGTAGCCCGGAGCCCCGACTTGCTCTCTACTTaGGAGAGGAGATTAAATGCT +
Preference number: 5 (lower is better)
Translates to: QEEKGTYASHPCKVARSPDLLST*ERRLNA
Trigger: AGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTC...GGGGCTCCGGGCTACTTTGCAGGGATGCGATGCGTAGGTGCCTTTCTCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAACCCACTGTGGGCGACTaGCTCTCTACTTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKPTVGD*LSTLER
Trigger: CCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGG...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQGSLGP*DTRGAQ
Trigger: CTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCC...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp TCACAATATTTACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGACCCACTGTGGGCGACTaGCTCTCTACTTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SQYLQTRPLWATCSLLWRPTVGD*LSTLER
Trigger: CCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGG...TCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTAAATATTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp TACAGACACGCCCACTGTGGGCGACTTGCTCTCTACTTTGGAGAGGAGATTAAAAAAATCCTAACAGAATaGCCCTCGGAGTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: YRHAHCGRLALYFGEEIKKILTE*PSEWPP
Trigger: CGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTT...TTTAATCTCCTCTCCAAAGTAGAGAGCAAGTCGCCCACAGTGGGCGTGTCTGTA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp AATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAATACTCCACGGCCATCTaGCAGGACAGCGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: NSLRTFPLSFAFLAMSLQYSTAI*QDSAWR
Trigger: CCGCCAGGCGCTGTCCTGCAAGATGGCCGTGGAGTA...TTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp ACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCTTTTGGACAGGACGCACCTaGTTCTCGCTGACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TIATTLQFPENFSLIIRFWTGRT*FSLTRS
Trigger: GGAGCGGGTCAGCGAGAACAAGGTGCGTCCTGTCCA...AAAGCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAATACTCCACGGCCATCTaGCAGGACAGCGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKYSTAI*QDSAWR
Trigger: CCGCCAGGCGCTGTCCTGCAAGATGGCCGTGGAGTA...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp GTCACCATAGCAACAACACTTCAATTCCCTGAGAACTTTTCCCTTATCATTCGCAGCCTTCCTGAGCATTaGCTCCATGCCCAGATCTGC +
Preference number: 5 (lower is better)
Translates to: VTIATTLQFPENFSLIIRSLPEH*LHAQIC
Trigger: GCAGATCTGGGCATGGAGCAAATGCTCAGGAAGGCT...GCGAATGATAAGGGAAAAGTTCTCAGGGAATTGAAGTGTTGTTGCTATGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS-3UTR CAA 90 bp AGAACTTTTCCCTTATCATTCGCTTTCCTAGCTATGTCTTTGCAAAGAGAAAAAAAAATCCTAACAGAATaGCCCTCGGAGTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: RTFPLSFAFLAMSLQREKKILTE*PSEWPP
Trigger: CGGAGGCCACTCCGAGGGCAATTCTGTTAGGATTTT...TTTTTCTCTTTGCAAAGACATAGCTAGGAAAGCGAATGATAAGGGAAAAGTTCT
42% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS-3UTR CAA 90 bp AGAGCACCTTTATTCACAGCAAAAGGACGTCACCATAGCAACAACACTTCAATTGACTTGCTCTCTACTTaGGAGAGGAGATTAAATGCT +
Preference number: 5 (lower is better)
Translates to: RAPLFTAKGRHHSNNTSIDLLST*ERRLNA
Trigger: AGCATTTAATCTCCTCTCCAAAGTAGAGAGCAAGTC...AATTGAAGTGTTGTTGCTATGGTGACGTCCTTTTGCTGTGAATAAAGGTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS GCA 72 bp TGGTGGGGTGGCGGCCGCGCGGCGCGCCCTTCCCCGTaGGCCTGCCTTGCACCGACCCGAAGCCCGTCGCTC +
Preference number: 6 (lower is better)
Translates to: WWGGGRAARPSP*ACLAPTRSPSL
Trigger: GAGCGACGGGCTTCGGGTCGGTGCAAGGCAGGCGCACGGGGAAGGGCGCGCCGCGCGGCCGCCACCCCACCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222725.10
CDS GCA 72 bp GCGCGGGTGAGCAGGCTGAAGTACTCGGACAGACTGTaGACGTCGCGGACCAGCGCCCCGGGCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: ARVSRLKYSDRL*TSRTSAPGAAA
Trigger: GGCGGCGGCGCCCGGGGCGCTGGTCCGCGACGTGCACAGTCTGTCCGAGTACTTCAGCCTGCTCACCCGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222725.10
ENST00000359574.7
CDS GCA 72 bp GAAGATGAACGTCTGTGCCAGCACGCGGCCGCCCCCTaGCAGGAGCGCTCTGCGGAAGAGGAGGGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: EDERLCQHAAAP*QERSAEEEGAA
Trigger: GGCGGCCCCCTCCTCTTCCGCAGAGCGCTCCTGGCAGGGGGCGGCCGCGTGCTGGCACAGACGTTCATCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493850.1
CDS CAA 90 bp CTCGAATGCCGAGGCCAGGGCAGCGCAACAGGGTCCCTGGGCCCTTaGGATACCAGGGGCGCCCAGGGATTGGGTCTCAGCCATGGCCAC +
Preference number: 6 (lower is better)
Translates to: LECRGQGSATGSLGP*DTRGAQGLGLSHGH
Trigger: GTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCTGGTATCCAAAGGGCCCAGGGACCCTGTTGCGCTGCCCTGGCCTCGGCATTCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS GCA 72 bp TGGAGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTaGTGGACCTTGGGCATCAGCTGCTCCGTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: WSLSASPAHQHG*WTLGISCSVPQ
Trigger: CTGAGGCACGGAGCAGCTGATGCCCAAGGTCCAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS CCA 72 bp GGATACCAGGGGCGCCCAGGGATTGGGTCTCAGCCATaGCCACTAGAAGATGGCAGTGCGGGGACACCAGGG +
Preference number: 6 (lower is better)
Translates to: GYQGRPGIGSQP*PLEDGSAGTPG
Trigger: CCCTGGTGTCCCCGCACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAATCCCTGGGCGCCCCTGGTATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS CCA 72 bp AGTCTGAGCGCCTCCCCAGCCCACCAGCATGGCTGCTaGACCTTGGGCATCAGCTGCTCCGTGCCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: SLSASPAHQHGC*TLGISCSVPQF
Trigger: AAACTGAGGCACGGAGCAGCTGATGCCCAAGGTCCAGCAGCCATGCTGGTGGGCTGGGGAGGCGCTCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359574.7
CDS TCA 72 bp CAAACCAGAAGTGGACAGGACGCACCTTGTTCTCGCTaGCCCGCTCCATGGCCTGGATGGGCCTGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: QTRSGQDAPCSR*PAPWPGWACPG
Trigger: GCCTGGACAGGCCCATCCAGGCCATGGAGCGGGTCAGCGAGAACAAGGTGCGTCCTGTCCACTTCTGGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000359574.7
ENST00000402045.5
ENST00000402506.5
ENST00000493850.1
ENST00000614382.1
CDS GCA 72 bp GATTGGGTCTCAGCCATGGCCACTAGAAGATGGCAGTaGGGGGACACCAGGGTGTGTCCGGGTACAGGTGGC +
Preference number: 6 (lower is better)
Translates to: DWVSAMATRRWQ*GDTRVCPGTGG
Trigger: GCCACCTGTACCCGGACACACCCTGGTGTCCCCGCACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS CCA 72 bp CCCAGGGATTGGGTCTCAGCCATGGCCACTAGAAGATaGCAGTGCGGGGACACCAGGGTGTGTCCGGGTACA +
Preference number: 6 (lower is better)
Translates to: PRDWVSAMATRR*QCGDTRVCPGT
Trigger: TGTACCCGGACACACCCTGGTGTCCCCGCACTGCCATCTTCTAGTGGCCATGGCTGAGACCCAATCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000402045.5
ENST00000402506.5
ENST00000614382.1
CDS TCA 72 bp AGTCATCAGGCAGCCGGATCCGCTCAGCCGTATTCATaGAGTGACCCCCGCTGGCCCACGGGCTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: SHQAAGSAQPYS*SDPRWPTGSSS
Trigger: TGAAGATGAGCCCGTGGGCCAGCGGGGGTCACTTCATGAATACGGCTGAGCGGATCCGGCTGCCTGATGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222725.10
ENST00000338732.7
ENST00000359574.7
ENST00000402045.5
ENST00000402506.5
ENST00000493850.1
ENST00000614382.1
CDS CCA 72 bp AGAGAGGCCACCTCCGTAGGACCTGAGAGCTGGTGTTaGGCTCCACTCATCCATCCATCCATCCATCCATCC +
Preference number: 6 (lower is better)
Translates to: REATSVGPESWC*APLIHPSIHPS
Trigger: GGATGGATGGATGGATGGATGGATGAGTGGAGCCCAACACCAGCTCTCAGGTCCTACGGAGGTGGCCTCTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS TCA 72 bp TCATCTTCCCCGTCAGTGAAGATGAACGTCTCTACCTaGATGTCAGCCGCAAGACAGCAGCGACCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: SSSPSVKMNVST*MSAARQQRPGV
Trigger: GACACCAGGTCGCTGCTGTCTTGCGGCTGACATTCAGGTAGAGACGTTCATCTTCACTGACGGGGAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338732.7
ENST00000402045.5
CDS GCA 72 bp GCCGCAAGACAGCAGCGACCTGGTGTCATTCAGACCTaGTTTACTTATTCTCCACGCAGCAGCTGGACAACT +
Preference number: 6 (lower is better)
Translates to: AARQQRPGVIQT*FTYSPRSSWTT
Trigger: AGTTGTCCAGCTGCTGCGTGGAGAATAAGTAAAGCAGGTCTGAATGACACCAGGTCGCTGCTGTCTTGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402045.5
CDS TCA 72 bp TTCCATCCATTTCATGTGCTCATCCCACAGCCTTCCTaGGCATTTGCTCCATGCCCAGATCTGCTTGGCACT +
Preference number: 6 (lower is better)
Translates to: FHPFHVLIPQPS*AFAPCPDLLGT
Trigger: AGTGCCAAGCAGATCTGGGCATGGAGCAAATGCTCAGGAAGGCTGTGGGATGAGCACATGAAATGGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402506.5
CDS CCA 72 bp CTCTACCTGAATGTCAGCCGCAAGACAGCAGCGACCTaGTGTCATTCAGACCTGCTTTACTTATTCTCCACG +
Preference number: 6 (lower is better)
Translates to: LYLNVSRKTAAT*CHSDLLYLFST
Trigger: CGTGGAGAATAAGTAAAGCAGGTCTGAATGACACCAGGTCGCTGCTGTCTTGCGGCTGACATTCAGGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402045.5