Pregenerated sensors for LETM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000168924Ensembl transcript IDs: ENST00000302787.3, ENST00000466175.5, ENST00000505551.5, ENST00000510940.1, ENST00000511977.1, ENST00000512669.1
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTaGCTGGGCCCGCGATGCCGCTCACAGGAGAGGCGTCTGCACACA | + |
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Preference number: 1 (lower is better) Translates to: VLSQGSEDEDESRGS*LGPRCRSQERRLHT Trigger: TGTGTGCAGACGCCTCTCCTGTGAGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR CCA 90 bp | TCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTaGGCCCGCGATGCCGCTCACAGGAGAGGCGTCTGCACACACCTG | + |
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Preference number: 1 (lower is better) Translates to: SAKAVRTRMRAGAAD*ARDAAHRRGVCTHL Trigger: CAGGTGTGTGCAGACGCCTCTCCTGTGAGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTCCAGGGGATGCCCTGTaGCGGATCCTCATGCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: AVRTRMRAGAADWARDAAPGDAL*RILMPH Trigger: ATGAGGCATGAGGATCCGGCACAGGGCATCCCCTGG...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR GCA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACCGCCCTCACGGCCCTTaGCAGGGTGACGGCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: QQCSAKAVRTRMRAGAADRPHGP*QGDGTA Trigger: TGCTGTGCCGTCACCCTGGCAAGGGCCGTGAGGGCG...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTGCGTCTGCACACACCTaGCAACTGCAAGACTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: AVRTRMRAGAADWARDAAASAHT*QLQDLF Trigger: GAACAAGTCTTGCAGTTGCCAGGTGTGTGCAGACGC...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTATCCTCATGCCTCATTaGCTAGCCTGCTTGCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AVRTRMRAGAADWARDAAILMPH*LACLLK Trigger: CTTCAGCAAGCAGGCTAGTCAATGAGGCATGAGGAT...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTCACACACCTGGCAACTaGAAGACTTGTTCTCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: AVRTRMRAGAADWARDAAHTPGN*KTCSQG Trigger: CCCTTGAGAACAAGTCTTGCAGTTGCCAGGTGTGTG...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR TCA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACAAGGGAAACCGCACGTaGGAACCAGCACTCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QQCSAKAVRTRMRAGAADKGNRT*EPALPA Trigger: TGCTGGGAGTGCTGGTTCTCACGTGCGGTTTCCCTT...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR GCA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTTTCCTGGACGCCTGTaGCGTTCCTGTCTTCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: QQCSAKAVRTRMRAGAADFPGRL*RSCLPN Trigger: ATTTGGAAGACAGGAACGGCACAGGCGTCCAGGAAA...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR CAA 90 bp | CCGCTCACAGGAGAGGCGTCTGCACACACCTGGCAACTGCAAGACTaGTTCTCAAGGGTAAGTACACTTGGACAAACGAACACCAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: PLTGEASAHTWQLQD*FSRVSTLGQTNTRL Trigger: TAGCCTGGTGTTCGTTTGTCCAAGTGTACTTACCCTTGAGAACAAGTCTTGCAGTTGCCAGGTGTGTGCAGACGCCTCTCCTGTGAGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATCCAGCCTGGCCATGCTaGCGAGTGCGGGGAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LGQTNTRLLTQGERIHKYPAWPC*RVRGGH Trigger: GTGGCCTCCCCGCACTCGGCAGCATGGCCAGGCTGG...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTGGCCAGCCTGGCCATaGTGCCGAGTGCGGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LGQTNTRLLTQGERIHKYWPAWP*CRVRGG Trigger: GCCTCCCCGCACTCGGCAGCATGGCCAGGCTGGCCA...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR CCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTCCACTGCAGCCCCCGTaGGAAACTCTGTGCCAATTG | + |
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Preference number: 2 (lower is better) Translates to: DKRTPGYLHRVREFINISPLQPP*ETLCQL Trigger: CAATTGGCACAGAGTTTCCCACGGGGGCTGCAGTGG...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR CCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTCCAGACACGATTCTGTaGAGGGGTTCCGGGATTCCA | + |
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Preference number: 2 (lower is better) Translates to: DKRTPGYLHRVREFINISPDTIL*RGSGIP Trigger: TGGAATCCCGGAACCCCTCCACAGAATCGTGTCTGG...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR CCA 72 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTaGGCCCGCGATGCCGCTCACAGGAGAGGCGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: AVRTRMRAGAAD*ARDAAHRRGVC Trigger: GCAGACGCCTCTCCTGTGAGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR TCA 72 bp | CAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTaGCTGGGCCCGCGATGCCGCTCACAGGAGAGGCGT | + |
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Preference number: 3 (lower is better) Translates to: QGSEDEDESRGS*LGPRCRSQERR Trigger: ACGCCTCTCCTGTGAGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR GCA 72 bp | AAGCCACCAAAGGCACCCACCAGAGCCTTCCCCACCTaGAAAGCCCCTGCAGCACCCGGAGGGCAAGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: KPPKAPTRAFPT*KAPAAPGGQAG Trigger: GCCAGCTTGCCCTCCGGGTGCTGCAGGGGCTTTGCAGGTGGGGAAGGCTCTGGTGGGTGCCTTTGGTGGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR CCA 72 bp | CACCTGCAAAGCCCCTGCAGCACCCGGAGGGCAAGCTaGCTTTTGGAGGCCATGCGGAGTCCAGGGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: HLQSPCSTRRAS*LLEAMRSPGQR Trigger: CCTCTGCCCTGGACTCCGCATGGCCTCCAAAAGCCAGCTTGCCCTCCGGGTGCTGCAGGGGCTTTGCAGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR-3UTR CAA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATGATCCTCATGCCTCATaGACTAGCCTGCTTGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LGQTNTRLLTQGERIHKYDPHAS*TSLLAE Trigger: TTCAGCAAGCAGGCTAGTCAATGAGGCATGAGGATC...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTCCAGCCTGGCCATGCTaGCGAGTGCGGGGAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: AVRTRMRAGAADWARDAAPAWPC*RVRGGH Trigger: GTGGCCTCCCCGCACTCGGCAGCATGGCCAGGCTGG...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR TCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTGCCCAACAGCCGAGGTaGTCGCCTCTGGAGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: AVRTRMRAGAADWARDAAAQQPR*SPLEDV Trigger: CACATCCTCCAGAGGCGATCACCTCGGCTGTTGGGC...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTACCCGGAGGGCAAGCTaGCTTTTGGAGGCCATGCGG | + |
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Preference number: 4 (lower is better) Translates to: AVRTRMRAGAADWARDAATRRAS*LLEAMR Trigger: CCGCATGGCCTCCAAAAGCCAGCTTGCCCTCCGGGT...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR TCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTAAGCGGAGCTGGCAGTaGGCCGAGATCACGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: AVRTRMRAGAADWARDAAKRSWQ*AEITPL Trigger: CAATGGCGTGATCTCGGCTCACTGCCAGCTCCGCTT...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGCCAGCCTGGCCATaGTGCCGAGTGCGGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QQCSAKAVRTRMRAGAADWPAWP*CRVRGG Trigger: GCCTCCCCGCACTCGGCAGCATGGCCAGGCTGGCCA...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTGACAGTGGGATGGGCTaGCTGTTGCAGTGGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: AVRTRMRAGAADWARDAADSGMG*LLQWLF Trigger: GAACAGCCACTGCAACAGGCAGCCCATCCCACTGTC...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTACGAGGGAGCAAGCCTaGATCAGAGCACGGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: AVRTRMRAGAADWARDAATREQA*IRARLM Trigger: CATCAGCCGTGCTCTGATGCAGGCTTGCTCCCTCGT...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTTGCGTGCCGCGATCTTaGTGTCGATCCATAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: AVRTRMRAGAADWARDAACVPRS*CRSIAG Trigger: GCCTGCTATGGATCGACACCAAGATCGCGGCACGCA...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACCCAGGGGATGCCCTGTaGCGGATCCTCATGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: QQCSAKAVRTRMRAGAADPGDAL*RILMPH Trigger: ATGAGGCATGAGGATCCGGCACAGGGCATCCCCTGG...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTTTTCCTGGACGCCTGTaGCGTTCCTGTCTTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: AVRTRMRAGAADWARDAAFPGRL*RSCLPN Trigger: ATTTGGAAGACAGGAACGGCACAGGCGTCCAGGAAA...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACCCGAGATCACGCCATTaGACTCCAGCCTGGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: QQCSAKAVRTRMRAGAADPRSRH*TPAWET Trigger: TGTCTCCCAGGCTGGAGTGCAATGGCGTGATCTCGG...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CCA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTAGTGCAGCAGCCAAATaGAACATTCAGGCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: AVRTRMRAGAADWARDAASAAAK*NIQAVP Trigger: AGGAACTGCCTGAATGTTCCATTTGGCTGCTGCACT...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR TCA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACAATGACGAGGGAGAATaGCGAGGGAGCAAGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QQCSAKAVRTRMRAGAADNDEGE*RGSKPA Trigger: TGCAGGCTTGCTCCCTCGTCATTCTCCCTCGTCATT...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CCA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACCCAGACACGATTCTGTaGAGGGGTTCCGGGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: QQCSAKAVRTRMRAGAADPDTIL*RGSGIP Trigger: TGGAATCCCGGAACCCCTCCACAGAATCGTGTCTGG...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACCACACACCTGGCAACTaGAAGACTTGTTCTCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: QQCSAKAVRTRMRAGAADHTPGN*KTCSQG Trigger: CCCTTGAGAACAAGTCTTGCAGTTGCCAGGTGTGTG...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATGCTGACAGAGGCGGCTaGCCTCGGACGGGAGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYADRGG*PRTGGA Trigger: AGCGCCTCCCGTCCGAGGCCAGCCGCCTCTGTCAGC...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTGCCGGGGCAGCTGACTaGGCCCGCGATGCCGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISAGAAD*ARDAAH Trigger: GTGAGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGC...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATCGCCCTCACGGCCCTTaGCAGGGTGACGGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYRPHGP*QGDGTA Trigger: TGCTGTGCCGTCACCCTGGCAAGGGCCGTGAGGGCG...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTTCCGGAGAAACTGCCTaGGCTCCCGGCGGGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISSGETA*APGGSG Trigger: GCCTGACCCGCCGGGAGCGCAGGCAGTTTCTCCGGA...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| 3UTR CAA 72 bp | GGAGAGGCGTCTGCACACACCTGGCAACTGCAAGACTaGTTCTCAAGGGTAAGTACACTTGGACAAACGAAC | + |
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Preference number: 4 (lower is better) Translates to: GEASAHTWQLQD*FSRVSTLGQTN Trigger: GTTCGTTTGTCCAAGTGTACTTACCCTTGAGAACAAGTCTTGCAGTTGCCAGGTGTGTGCAGACGCCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTCACCTGCAAAGCCCCTaGAGCACCCGGAGGGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISHLQSP*STRRAS Trigger: GCTTGCCCTCCGGGTGCTGCAGGGGCTTTGCAGGTG...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATATGAGCAGGATCCCCTaGACTACCCCGCGGGACGGT | + |
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Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYMSRIP*TTPRDG Trigger: ACCGTCCCGCGGGGTAGTCCAGGGGATCCTGCTCAT...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTCGGTCCCCGGCCTTTaGGGAGCAGCTACCACACGT | + |
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Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYSVPGL*GAATTR Trigger: ACGTGTGGTAGCTGCTCCCCAAAGGCCGGGGACCGA...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATGGGCAGAGGGGACAGTaGGATGGGCTGCCTGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYGQRGQ*DGLPVA Trigger: TGCAACAGGCAGCCCATCCCACTGTCCCCTCTGCCC...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTTCGTCCAGCACCCGCTaGCCCAGGGACTTCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISSSSTR*PRDFFT Trigger: GGTGAAGAAGTCCCTGGGGCAGCGGGTGCTGGACGA...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATAGCACCGGGACCCACTaGGAACAAAGACAGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYSTGTH*EQRQSR Trigger: CCGGCTCTGTCTTTGTTCGCAGTGGGTCCCGGTGCT...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR TCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATAAGGGAAACCGCACGTaGGAACCAGCACTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYKGNRT*EPALPA Trigger: TGCTGGGAGTGCTGGTTCTCACGTGCGGTTTCCCTT...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR GCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATCACAGGAGAGGCGTCTaGACACACCTGGCAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYHRRGV*THLATA Trigger: TGCAGTTGCCAGGTGTGTGCAGACGCCTCTCCTGTG...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTAGGCATTTCTGGCTGTaGCTCGGTCCCCGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISRHFWL*LGPRPL Trigger: CAAAGGCCGGGGACCGAGCCACAGCCAGAAATGCCT...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTTGTGTCAGGCATTTCTaGCTGTGGCTCGGTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISCVRHF*LWLGPR Trigger: CCGGGGACCGAGCCACAGCCAGAAATGCCTGACACA...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTGGGCAAGCTGGCTTTTaGAGGCCATGCGGAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISGQAGF*RPCGVQ Trigger: CTGGACTCCGCATGGCCTCCAAAAGCCAGCTTGCCC...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR TCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTGCATCAGAGCACGGCTaGTGTCACGGAAGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISASEHG*CHGSHQ Trigger: TTGGTGGCTTCCGTGACATCAGCCGTGCTCTGATGC...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATGGATGGGCTGCCTGTTaGAGTGGCTGTTCACGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYGWAAC*SGCSRQ Trigger: TTGACGTGAACAGCCACTGCAACAGGCAGCCCATCC...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATCGAGGTGATCGCCTCTaGAGGATGTGTACACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYRGDRL*RMCTQG Trigger: ACCCTGTGTACACATCCTCCAGAGGCGATCACCTCG...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATGGCTGCCTGTTGCAGTaGCTGTTCACGTCAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYGCLLQ*LFTSTV Trigger: CACTGTTGACGTGAACAGCCACTGCAACAGGCAGCC...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR TCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTGTCCTTCAAGGTCTCTaGCTGCAGGACTGTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISVLQGL*LQDCVR Trigger: CCTGACACAGTCCTGCAGTCAGAGACCTTGAAGGAC...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATGCGTCTGCACACACCTaGCAACTGCAAGACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGQTNTRLLTQGERIHKYASAHT*QLQDLF Trigger: GAACAAGTCTTGCAGTTGCCAGGTGTGTGCAGACGC...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR TCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTCTTCTCCTTGGTGAGTaGCTTCTTCTGCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISLLLGE*LLLLLQ Trigger: CTGCAGGAGCAGAAGAAGTCACTCACCAAGGAGAAG...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR GCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTGCAGGAAGTTGTTGGTaGCGATGGACTGTAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISAGSCW*RWTVAP Trigger: TGGAGCTACAGTCCATCGGCACCAACAACTTCCTGC...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR GCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTTGTTCACGTCAACAGTaGTCAGCCAAGGCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISCSRQQ*SAKAVR Trigger: CCTCACTGCCTTGGCTGAGCACTGTTGACGTGAACA...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR GCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTATCAAGCCATCGATCTaGCCGATCATTTGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISIKPSI*PIICCT Trigger: GGTGCAGCAAATGATCGGGCAGATCGATGGCTTGAT...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTAAGGGTAAGTACACTTaGACAAACGAACACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISKGKYT*TNEHQA Trigger: AGCCTGGTGTTCGTTTGTCCAAGTGTACTTACCCTT...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CCA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTGTTTCCCGGATCTTCTaGAAAAACACAGAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DKRTPGYLHRVREFINISVSRIF*KNTEKS Trigger: AGACTTCTCTGTGTTTTTCCAGAAGATCCGGGAAAC...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS CCA 90 bp | GCGGCGCTTCAGACCCGGCCCGCGCGGACGGCTGACAGAGGCGGCTaGCCTCGGACGGGAGGCGCTCTCCTCAAGGACCCGGCACCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AALQTRPARTADRGG*PRTGGALLKDPAPA Trigger: CGCTGGTGCCGGGTCCTTGAGGAGAGCGCCTCCCGTCCGAGGCCAGCCGCCTCTGTCAGCCGTCCGCGCGGGCCGGGTCTGAAGCGCCGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS TCA 90 bp | GGTGGCGTCTGGCCTGTGGACCTCTCCTGCCTGAACCAGCAAAGCTaGGGCTGCTGTCTGCTGGGGGAGACGCCCGGGCCCACAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGVWPVDLSCLNQQS*GCCLLGETPGPTGC Trigger: GCAGCCTGTGGGCCCGGGCGTCTCCCCCAGCAGACAGCAGCCTCAGCTTTGCTGGTTCAGGCAGGAGAGGTCCACAGGCCAGACGCCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505551.5 |
||
| CDS GCA 90 bp | GCTGCTGTCTGCTGGGGGAGACGCCCGGGCCCACAGGCTGCTGCATaGAGGTCCTGTGATCCTCTCTCTGCCACAGAAGTGGCCGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: AAVCWGRRPGPQAAA*RSCDPLSATEVAGT Trigger: GGTCCCGGCCACTTCTGTGGCAGAGAGAGGATCACAGGACCTGCATGCAGCAGCCTGTGGGCCCGGGCGTCTCCCCCAGCAGACAGCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505551.5 |
||
| CDS-3UTR CAA 90 bp | GCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACTGGGCCCGCGATGCCGCTAGCGTGGCCTCCAGCTaGGCCTTGTTGTCCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AVRTRMRAGAADWARDAASVASS*ALLSTC Trigger: GCAGGTGGACAACAAGGCCAAGCTGGAGGCCACGCT...AGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS TCA 90 bp | GGGAGCTCGTGGGGGCAGACTCCTGACACTCCACTGGCCCCCGACTaGGCCTCCTGGGTAAACTTTCAAGCGCCAGCCAGCACCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSWGQTPDTPLAPD*ASWVNFQAPASTWG Trigger: CCCCCAGGTGCTGGCTGGCGCTTGAAAGTTTACCCAGGAGGCTCAGTCGGGGGCCAGTGGAGTGTCAGGAGTCTGCCCCCACGAGCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS TCA 90 bp | GGTGTGCTCCTGGGGGCGGCCCTATGCAGCACACCCCCGTGCAGGTaGCTGCAAGCACATCCTTCTTGGCAGCTGGGCGGCCCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVLLGAALCSTPPCR*LQAHPSWQLGGPGK Trigger: CTTTCCTGGGCCGCCCAGCTGCCAAGAAGGATGTGCTTGCAGTCACCTGCACGGGGGTGTGCTGCATAGGGCCGCCCCCAGGAGCACACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000505551.5 |
||
| CDS TCA 90 bp | CCACAGTCCAGGCCTCTGACCAGCCCCTGGGACCTGGGATCTTCTTaGCTGACTCCAGCCAGAGGGCAATGCCCAGCAGAGGAGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQSRPLTSPWDLGSS*LTPARGQCPAEEPG Trigger: GCCGGGCTCCTCTGCTGGGCATTGCCCTCTGGCTGGAGTCAGTCAAGAAGATCCCAGGTCCCAGGGGCTGGTCAGAGGCCTGGACTGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS GCA 90 bp | TCTTGGCAGCTGGGCGGCCCAGGAAAGGTTGGGACGGGCCCCTCCTaGTCTGCAAGGCACGATGTCCTGGGTGAGGCTCCCAAAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SWQLGGPGKVGTGPS*SARHDVLGEAPKAW Trigger: CCATGCTTTGGGAGCCTCACCCAGGACATCGTGCCTTGCAGAGCAGGAGGGGCCCGTCCCAACCTTTCCTGGGCCGCCCAGCTGCCAAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS GCA 90 bp | TGCTCCTGGGGGCGGCCCTATGCAGCACACCCCCGTGCAGGTGACTaGAAGCACATCCTTCTTGGCAGCTGGGCGGCCCAGGAAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSWGRPYAAHPRAGD*KHILLGSWAAQERL Trigger: CAACCTTTCCTGGGCCGCCCAGCTGCCAAGAAGGATGTGCTTGCAGTCACCTGCACGGGGGTGTGCTGCATAGGGCCGCCCCCAGGAGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS CCA 90 bp | GCACACCCCCGTGCAGGTGACTGCAAGCACATCCTTCTTGGCAGCTaGGCGGCCCAGGAAAGGTTGGGACGGGCCCCTCCTGCTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AHPRAGDCKHILLGS*AAQERLGRAPPALQ Trigger: TTGCAGAGCAGGAGGGGCCCGTCCCAACCTTTCCTGGGCCGCCCAGCTGCCAAGAAGGATGTGCTTGCAGTCACCTGCACGGGGGTGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS GCA 90 bp | GGCCACACTGGGAGCAGGCCTGCAGGTGACATTGGGCAGCACACCTaGCACAGAAGGTCCCTAGGGAGGCTCCATGCAGCTGCCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GHTGSRPAGDIGQHT*HRRSLGRLHAAARS Trigger: TGACCTGGCAGCTGCATGGAGCCTCCCTAGGGACCTTCTGTGGCAGGTGTGCTGCCCAATGTCACCTGCAGGCCTGCTCCCAGTGTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510940.1 |
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| CDS GCA 90 bp | GCCTCCCTGACCACTCCAGGAGGAAATAAACATGCAGGACAGAGCTaGAGGGCAAGCATGCGGGAGGCCAAGACTGTGGGCGTGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLTTPGGNKHAGQS*RASMREAKTVGVRG Trigger: CCCCCGCACGCCCACAGTCTTGGCCTCCCGCATGCTTGCCCTGCAGCTCTGTCCTGCATGTTTATTTCCTCCTGGAGTGGTCAGGGAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511977.1 |
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| CDS GCA 90 bp | GCAGCACACCTGCCACAGAAGGTCCCTAGGGAGGCTCCATGCAGCTaGCAGGTCACCTGGGGCCCTCTCCAGAACAGGCTAGAGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: AAHLPQKVPREAPCS*QVTWGPLQNRLEHL Trigger: AAGGTGCTCTAGCCTGTTCTGGAGAGGGCCCCAGGTGACCTGGCAGCTGCATGGAGCCTCCCTAGGGACCTTCTGTGGCAGGTGTGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510940.1 |
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| CDS GCA 90 bp | CATTGGGCAGCACACCTGCCACAGAAGGTCCCTAGGGAGGCTCCATaGAGCTGCCAGGTCACCTGGGGCCCTCTCCAGAACAGGCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HWAAHLPQKVPREAP*SCQVTWGPLQNRLE Trigger: CTCTAGCCTGTTCTGGAGAGGGCCCCAGGTGACCTGGCAGCTGCATGGAGCCTCCCTAGGGACCTTCTGTGGCAGGTGTGCTGCCCAATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510940.1 |
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| CDS GCA 90 bp | GGTCCTGTGATCCTCTCTCTGCCACAGAAGTGGCCGGGACCCTGCTaGTCTGGGGCAGGAAGAGGTGCACCTGTGTGCACCTACATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPVILSLPQKWPGPC*SGAGRGAPVCTYIS Trigger: GGAGATGTAGGTGCACACAGGTGCACCTCTTCCTGCCCCAGAGCAGCAGGGTCCCGGCCACTTCTGTGGCAGAGAGAGGATCACAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505551.5 |
||
| CDS CCA 90 bp | CAGCAGCCCCATGGCTGTGTCGCCTCCTCCCGAGAGGCTTCTCCGTaGTTAGGCCTCAGCCTGGCAGTCTTTTCTGTCAAGGGCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: QQPHGCVASSREASP*LGLSLAVFSVKGQT Trigger: TGTCTGGCCCTTGACAGAAAAGACTGCCAGGCTGAGGCCTAACCACGGAGAAGCCTCTCGGGAGGAGGCGACACAGCCATGGGGCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505551.5 |
||
| CDS CCA 90 bp | CCACAGAAGGTCCCTAGGGAGGCTCCATGCAGCTGCCAGGTCACCTaGGGCCCTCTCCAGAACAGGCTAGAGCACCTTATCCATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQKVPREAPCSCQVT*GPLQNRLEHLIHLW Trigger: CCAGAGATGGATAAGGTGCTCTAGCCTGTTCTGGAGAGGGCCCCAGGTGACCTGGCAGCTGCATGGAGCCTCCCTAGGGACCTTCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510940.1 |
||
| CDS TCA 90 bp | ACTCCAAAGTGGCACAAGTCCCTCAAGCCAACAACACCGGCCTCGTaGACCCCATCTAGTCCTCAGGGATCTCGGTCCGTGGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPKWHKSLKPTTPAS*TPSSPQGSRSVAAA Trigger: GGCAGCTGCCACGGACCGAGATCCCTGAGGACTAGATGGGGTTCACGAGGCCGGTGTTGTTGGCTTGAGGGACTTGTGCCACTTTGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS TCA 90 bp | AAGAGGTGCACCTGTGTGCACCTACATCTCCCACGGATGACTGCCTaGGCCTTGGGGGAGGGGTGGCCATCTAGCTCTTTAGGGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRCTCVHLHLPRMTA*ALGEGWPSSSLGRA Trigger: AGCTCTCCCTAAAGAGCTAGATGGCCACCCCTCCCCCAAGGCTCAGGCAGTCATCCGTGGGAGATGTAGGTGCACACAGGTGCACCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS GCA 90 bp | AATCGTAACATGCAGGATGCCAGCTCTGAGACACAATTTCAGGTGTaGTCCTGGGGGCGGCCCTATGCAGCACACCCCCGTGCAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NRNMQDASSETQFQV*SWGRPYAAHPRAGD Trigger: GTCACCTGCACGGGGGTGTGCTGCATAGGGCCGCCCCCAGGAGCACACCTGAAATTGTGTCTCAGAGCTGGCATCCTGCATGTTACGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000505551.5 |
||
| CDS CCA 90 bp | TCCTGCTCTGCAAGGCACGATGTCCTGGGTGAGGCTCCCAAAGCATaGCTCCCCCTAAAACATCTTGCTGGAACCACCACCCACTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSARHDVLGEAPKA*LPLKHLAGTTTHSL Trigger: CAGGGAGTGGGTGGTGGTTCCAGCAAGATGTTTTAGGGGGAGCCATGCTTTGGGAGCCTCACCCAGGACATCGTGCCTTGCAGAGCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505551.5 |
||
| CDS-3UTR CAA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACACCAGCTCAATCACCTaGACGAGGTCGTCGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QQCSAKAVRTRMRAGAADTSSIT*TRSSML Trigger: CAACATCGACGACCTCGTCAAGGTGATTGAGCTGGT...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CAA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACGATCCTCATGCCTCATaGACTAGCCTGCTTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QQCSAKAVRTRMRAGAADDPHAS*TSLLAE Trigger: TTCAGCAAGCAGGCTAGTCAATGAGGCATGAGGATC...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS CCA 90 bp | GCCTCTGTGCTGCAGCGGGAAAACCCCACAGACAACGCACACGCATaGCTGGAGTTTCTAGGCCCTGGTTTAAGCTCTTCCTGCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASVLQRENPTDNAHA*LEFLGPGLSSSCTS Trigger: TGAAGTGCAGGAAGAGCTTAAACCAGGGCCTAGAAACTCCAGCCATGCGTGTGCGTTGTCTGTGGGGTTTTCCCGCTGCAGCACAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000466175.5 ENST00000505551.5 |
||
| CDS GCA 90 bp | CCCAGGCCAGTGGTTCTAGCTCTTCACCTCTGCGACCTCCTTCTCTaGCTTCTCTTTGGCCTTCTCCTTCTCCTCCACCTTCTCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PRPVVLALHLCDLLL*LLFGLLLLLHLLLF Trigger: AAAGAGGAGAAGGTGGAGGAGAAGGAGAAGGCCAAAGAGAAGGCAGAGAAGGAGGTCGCAGAGGTGAAGAGCTAGAACCACTGGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS GCA 90 bp | GCACACGCATGGCTGGAGTTTCTAGGCCCTGGTTTAAGCTCTTCCTaGACTTCAGACACATCCTTCTCACTCCAAAGTGGCACAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AHAWLEFLGPGLSSS*TSDTSFSLQSGTSP Trigger: GGGACTTGTGCCACTTTGGAGTGAGAAGGATGTGTCTGAAGTGCAGGAAGAGCTTAAACCAGGGCCTAGAAACTCCAGCCATGCGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000466175.5 ENST00000505551.5 |
||
| CDS-3UTR CAA 90 bp | CAACAGTGCTCAGCCAAGGCAGTGAGGACGAGGATGAGAGCCGGGGCAGCTGACATCTCTAATAAAAACTaGCCCGTAATCCCAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: QQCSAKAVRTRMRAGAADISNKN*PVIPAL Trigger: AAGTGCTGGGATTACGGGCAAGTTTTTATTAGAGAT...GTCAGCTGCCCCGGCTCTCATCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS CCA 90 bp | AAACCCCACAGACAACGCACACGCATGGCTGGAGTTTCTAGGCCCTaGTTTAAGCTCTTCCTGCACTTCAGACACATCCTTCTCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPHRQRTRMAGVSRP*FKLFLHFRHILLTP Trigger: TGGAGTGAGAAGGATGTGTCTGAAGTGCAGGAAGAGCTTAAACCAGGGCCTAGAAACTCCAGCCATGCGTGTGCGTTGTCTGTGGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000466175.5 ENST00000505551.5 |
||
| CDS-3UTR CAA 90 bp | CTTGGACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATCTCGGTCCCCGGCCTTaGGGGAGCAGCTACCACACG | + |
|
Preference number: 5 (lower is better) Translates to: LGQTNTRLLTQGERIHKYLGPRP*GSSYHT Trigger: CGTGTGGTAGCTGCTCCCCAAAGGCCGGGGACCGAG...ATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302787.3 |
||
| CDS-3UTR CAA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTAGGGCAAGCTGGCTTTaGGAGGCCATGCGGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: DKRTPGYLHRVREFINISRASWL*EAMRSP Trigger: TGGACTCCGCATGGCCTCCAAAAGCCAGCTTGCCCT...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CAA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTATGCGTGCCGCGATCTaGGTGTCGATCCATAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: DKRTPGYLHRVREFINISMRAAI*VSIHSR Trigger: CCTGCTATGGATCGACACCAAGATCGCGGCACGCAT...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS-3UTR CAA 90 bp | GACAAACGAACACCAGGCTACTTACACAGGGTGAGAGAATTCATAAATATTAGTTGGCAACTGCAAGACTaGTTCTCAAGGGTAAGTACA | + |
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Preference number: 5 (lower is better) Translates to: DKRTPGYLHRVREFINISWQLQD*FSRVST Trigger: TGTACTTACCCTTGAGAACAAGTCTTGCAGTTGCCA...ACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS CCA 72 bp | CAGACCCGGCCCGCGCGGACGGCTGACAGAGGCGGCTaGCCTCGGACGGGAGGCGCTCTCCTCAAGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: QTRPARTADRGG*PRTGGALLKDP Trigger: CGGGTCCTTGAGGAGAGCGCCTCCCGTCCGAGGCCAGCCGCCTCTGTCAGCCGTCCGCGCGGGCCGGGTCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302787.3 |
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| CDS GCA 72 bp | CTGGGCGGCCCAGGAAAGGTTGGGACGGGCCCCTCCTaGTCTGCAAGGCACGATGTCCTGGGTGAGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LGGPGKVGTGPS*SARHDVLGEAP Trigger: GGGAGCCTCACCCAGGACATCGTGCCTTGCAGAGCAGGAGGGGCCCGTCCCAACCTTTCCTGGGCCGCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS TCA 72 bp | CTGGGGGCGGCCCTATGCAGCACACCCCCGTGCAGGTaGCTGCAAGCACATCCTTCTTGGCAGCTGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: LGAALCSTPPCR*LQAHPSWQLGG Trigger: GCCGCCCAGCTGCCAAGAAGGATGTGCTTGCAGTCACCTGCACGGGGGTGTGCTGCATAGGGCCGCCCCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS TCA 72 bp | TGGCCTGTGGACCTCTCCTGCCTGAACCAGCAAAGCTaGGGCTGCTGTCTGCTGGGGGAGACGCCCGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: WPVDLSCLNQQS*GCCLLGETPGP Trigger: GGGCCCGGGCGTCTCCCCCAGCAGACAGCAGCCTCAGCTTTGCTGGTTCAGGCAGGAGAGGTCCACAGGCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS GCA 72 bp | GGGCGGCCCTATGCAGCACACCCCCGTGCAGGTGACTaGAAGCACATCCTTCTTGGCAGCTGGGCGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GRPYAAHPRAGD*KHILLGSWAAQ Trigger: CTGGGCCGCCCAGCTGCCAAGAAGGATGTGCTTGCAGTCACCTGCACGGGGGTGTGCTGCATAGGGCCGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS GCA 72 bp | ACCACTGTGGCCATCGGGGAGTCCCCATGTCAGAGTTaGAGCCCTCACACCCGGGCACCCTGCCTCCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: TTVAIGESPCQS*SPHTRAPCLPD Trigger: GTCAGGGAGGCAGGGTGCCCGGGTGTGAGGGCTGCAACTCTGACATGGGGACTCCCCGATGGCCACAGTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511977.1 |
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| CDS CAA 90 bp | CCTATGCAGCACACCCCCGTGCAGGTGACTGCAAGCACATCCTTCTaGGCAGCTGGGCGGCCCAGGAAAGGTTGGGACGGGCCCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PMQHTPVQVTASTSF*AAGRPRKGWDGPLL Trigger: CAGGAGGGGCCCGTCCCAACCTTTCCTGGGCCGCCCAGCTGCCAAGAAGGATGTGCTTGCAGTCACCTGCACGGGGGTGTGCTGCATAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS GCA 72 bp | GCACACCTGCCACAGAAGGTCCCTAGGGAGGCTCCATaGAGCTGCCAGGTCACCTGGGGCCCTCTCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: AHLPQKVPREAP*SCQVTWGPLQN Trigger: GTTCTGGAGAGGGCCCCAGGTGACCTGGCAGCTGCATGGAGCCTCCCTAGGGACCTTCTGTGGCAGGTGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510940.1 |
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| CDS CCA 72 bp | CTCCGGTGCTGGGCTAGCCTGGGGAAAGGTGGCGTCTaGCCTGTGGACCTCTCCTGCCTGAACCAGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LRCWASLGKGGV*PVDLSCLNQQS Trigger: GCTTTGCTGGTTCAGGCAGGAGAGGTCCACAGGCCAGACGCCACCTTTCCCCAGGCTAGCCCAGCACCGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS CAA 72 bp | CACACCCCCGTGCAGGTGACTGCAAGCACATCCTTCTaGGCAGCTGGGCGGCCCAGGAAAGGTTGGGACGGG | + |
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Preference number: 6 (lower is better) Translates to: HTPVQVTASTSF*AAGRPRKGWDG Trigger: CCCGTCCCAACCTTTCCTGGGCCGCCCAGCTGCCAAGAAGGATGTGCTTGCAGTCACCTGCACGGGGGTGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS TCA 72 bp | TGGGGGCAGACTCCTGACACTCCACTGGCCCCCGACTaGGCCTCCTGGGTAAACTTTCAAGCGCCAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: WGQTPDTPLAPD*ASWVNFQAPAS Trigger: GCTGGCTGGCGCTTGAAAGTTTACCCAGGAGGCTCAGTCGGGGGCCAGTGGAGTGTCAGGAGTCTGCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS TCA 72 bp | AGCTTAACTCACTGGGAGCTCGTGGGGGCAGACTCCTaGCACTCCACTGGCCCCCGACTGAGCCTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SLTHWELVGADS*HSTGPRLSLLG Trigger: ACCCAGGAGGCTCAGTCGGGGGCCAGTGGAGTGTCAGGAGTCTGCCCCCACGAGCTCCCAGTGAGTTAAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS GCA 72 bp | CTGCCACAGAAGGTCCCTAGGGAGGCTCCATGCAGCTaGCAGGTCACCTGGGGCCCTCTCCAGAACAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: LPQKVPREAPCS*QVTWGPLQNRL Trigger: TAGCCTGTTCTGGAGAGGGCCCCAGGTGACCTGGCAGCTGCATGGAGCCTCCCTAGGGACCTTCTGTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510940.1 |
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| CDS GCA 72 bp | GGGAGCAGGCCTGCAGGTGACATTGGGCAGCACACCTaGCACAGAAGGTCCCTAGGGAGGCTCCATGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GSRPAGDIGQHT*HRRSLGRLHAA Trigger: AGCTGCATGGAGCCTCCCTAGGGACCTTCTGTGGCAGGTGTGCTGCCCAATGTCACCTGCAGGCCTGCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510940.1 |
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| CDS TCA 72 bp | AGGCCTCTGACCAGCCCCTGGGACCTGGGATCTTCTTaGCTGACTCCAGCCAGAGGGCAATGCCCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RPLTSPWDLGSS*LTPARGQCPAE Trigger: CTCTGCTGGGCATTGCCCTCTGGCTGGAGTCAGTCAAGAAGATCCCAGGTCCCAGGGGCTGGTCAGAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS TCA 72 bp | AGCTGCCGTCTCCCCATCCTCACCTCACTCACCACATaGCCGCAGGAAACCTCAAGGGCCGCTCCTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SCRLPILTSLTT*PQETSRAAPPL Trigger: GAGAGGAGGAGCGGCCCTTGAGGTTTCCTGCGGTCATGTGGTGAGTGAGGTGAGGATGGGGAGACGGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS TCA 72 bp | GTCACCTGCCCAGCTTGGCCTCAAACCACTGACTTCTaGCTCCGGTGCTGGGCTAGCCTGGGGAAAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: VTCPAWPQTTDF*LRCWASLGKGG Trigger: GCCACCTTTCCCCAGGCTAGCCCAGCACCGGAGTCAGAAGTCAGTGGTTTGAGGCCAAGCTGGGCAGGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS CCA 72 bp | GTCCCTAGGGAGGCTCCATGCAGCTGCCAGGTCACCTaGGGCCCTCTCCAGAACAGGCTAGAGCACCTTATC | + |
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Preference number: 6 (lower is better) Translates to: VPREAPCSCQVT*GPLQNRLEHLI Trigger: GATAAGGTGCTCTAGCCTGTTCTGGAGAGGGCCCCAGGTGACCTGGCAGCTGCATGGAGCCTCCCTAGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510940.1 |
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| CDS GCA 72 bp | ATGCAGGATGCCAGCTCTGAGACACAATTTCAGGTGTaGTCCTGGGGGCGGCCCTATGCAGCACACCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: MQDASSETQFQV*SWGRPYAAHPR Trigger: ACGGGGGTGTGCTGCATAGGGCCGCCCCCAGGAGCACACCTGAAATTGTGTCTCAGAGCTGGCATCCTGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS CCA 72 bp | AAACCACTGACTTCTGACTCCGGTGCTGGGCTAGCCTaGGGAAAGGTGGCGTCTGGCCTGTGGACCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: KPLTSDSGAGLA*GKVASGLWTSP Trigger: AGGAGAGGTCCACAGGCCAGACGCCACCTTTCCCCAGGCTAGCCCAGCACCGGAGTCAGAAGTCAGTGGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS TCA 72 bp | TGGCACAAGTCCCTCAAGCCAACAACACCGGCCTCGTaGACCCCATCTAGTCCTCAGGGATCTCGGTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: WHKSLKPTTPAS*TPSSPQGSRSV Trigger: CACGGACCGAGATCCCTGAGGACTAGATGGGGTTCACGAGGCCGGTGTTGTTGGCTTGAGGGACTTGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS GCA 72 bp | AGCCCAGCGCCCGCCATCACACAGAAGCAGTCTTCTTaGTCCCCGAAGCTCAGAACATATGGCAGAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SPAPAITQKQSS*SPKLRTYGRGH Trigger: GTGGCCTCTGCCATATGTTCTGAGCTTCGGGGAGCAAGAAGACTGCTTCTGTGTGATGGCGGGCGCTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510940.1 |
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| CDS CCA 72 bp | CATGGCTGTGTCGCCTCCTCCCGAGAGGCTTCTCCGTaGTTAGGCCTCAGCCTGGCAGTCTTTTCTGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: HGCVASSREASP*LGLSLAVFSVK Trigger: CTTGACAGAAAAGACTGCCAGGCTGAGGCCTAACCACGGAGAAGCCTCTCGGGAGGAGGCGACACAGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS CAA 72 bp | CAGCCCAGCGCCCGCCATCACACAGAAGCAGTCTTCTaGCTCCCCGAAGCTCAGAACATATGGCAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QPSARHHTEAVF*LPEAQNIWQRP Trigger: TGGCCTCTGCCATATGTTCTGAGCTTCGGGGAGCAAGAAGACTGCTTCTGTGTGATGGCGGGCGCTGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510940.1 |
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| CDS TCA 72 bp | AAGCGCCAGCCAGCACCTGGGGGAGCTCCACTCTGCTaGGCACAGCGAAAGGGAAACAGAAAATCAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: KRQPAPGGAPLC*AQRKGNRKSGK Trigger: CTTCCCTGATTTTCTGTTTCCCTTTCGCTGTGCTCAGCAGAGTGGAGCTCCCCCAGGTGCTGGCTGGCGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS TCA 72 bp | AGCTGGGCTAGGAGGGTACCTAGCAGAGGTGACAGATaGGGGAGGACGAGGCTGACTTGGTGCCCAACTCAA | + |
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Preference number: 6 (lower is better) Translates to: SWARRVPSRGDR*GRTRLTWCPTQ Trigger: TTGAGTTGGGCACCAAGTCAGCCTCGTCCTCCCTCATCTGTCACCTCTGCTAGGTACCCTCCTAGCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS TCA 72 bp | ACCTGTGTGCACCTACATCTCCCACGGATGACTGCCTaGGCCTTGGGGGAGGGGTGGCCATCTAGCTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: TCVHLHLPRMTA*ALGEGWPSSSL Trigger: TAAAGAGCTAGATGGCCACCCCTCCCCCAAGGCTCAGGCAGTCATCCGTGGGAGATGTAGGTGCACACAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS GCA 72 bp | TGGCTTTGCAGCCATGGAAACCACTCGCCTCTGTGCTaGAGCGGGAAAACCCCACAGACAACGCACACGCAT | + |
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Preference number: 6 (lower is better) Translates to: WLCSHGNHSPLC*SGKTPQTTHTH Trigger: ATGCGTGTGCGTTGTCTGTGGGGTTTTCCCGCTGCAGCACAGAGGCGAGTGGTTTCCATGGCTGCAAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000466175.5 ENST00000505551.5 |
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| CDS GCA 72 bp | TTCTGGCTTTGCAGCCATGGAAACCACTCGCCTCTGTaGTGCAGCGGGAAAACCCCACAGACAACGCACACG | + |
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Preference number: 6 (lower is better) Translates to: FWLCSHGNHSPL*CSGKTPQTTHT Trigger: CGTGTGCGTTGTCTGTGGGGTTTTCCCGCTGCAGCACAGAGGCGAGTGGTTTCCATGGCTGCAAAGCCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000466175.5 ENST00000505551.5 |
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| CDS GCA 72 bp | ACCACTCCAGGAGGAAATAAACATGCAGGACAGAGCTaGAGGGCAAGCATGCGGGAGGCCAAGACTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TTPGGNKHAGQS*RASMREAKTVG Trigger: GCCCACAGTCTTGGCCTCCCGCATGCTTGCCCTGCAGCTCTGTCCTGCATGTTTATTTCCTCCTGGAGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511977.1 |
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| CDS CCA 72 bp | GCAAGGCACGATGTCCTGGGTGAGGCTCCCAAAGCATaGCTCCCCCTAAAACATCTTGCTGGAACCACCACC | + |
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Preference number: 6 (lower is better) Translates to: ARHDVLGEAPKA*LPLKHLAGTTT Trigger: GGTGGTGGTTCCAGCAAGATGTTTTAGGGGGAGCCATGCTTTGGGAGCCTCACCCAGGACATCGTGCCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS CCA 72 bp | CTGCAGCGGGAAAACCCCACAGACAACGCACACGCATaGCTGGAGTTTCTAGGCCCTGGTTTAAGCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LQRENPTDNAHA*LEFLGPGLSSS Trigger: GGAAGAGCTTAAACCAGGGCCTAGAAACTCCAGCCATGCGTGTGCGTTGTCTGTGGGGTTTTCCCGCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000466175.5 ENST00000505551.5 |
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| CDS CCA 72 bp | TTCCTGCACTTCAGACACATCCTTCTCACTCCAAAGTaGCACAAGTCCCTCAAGCCAACAACACCGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: FLHFRHILLTPK*HKSLKPTTPAS Trigger: CGAGGCCGGTGTTGTTGGCTTGAGGGACTTGTGCCACTTTGGAGTGAGAAGGATGTGTCTGAAGTGCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000466175.5 ENST00000505551.5 ENST00000512669.1 |
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| CDS CAA 90 bp | TGGCAGTCTTTTCTGTCAAGGGCCAGACAGCAAGTATTTCTGGCTTaGCAGCCATGGAAACCACTCGCCTCTGTGCTGCAGCGGGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: WQSFLSRARQQVFLA*QPWKPLASVLQREN Trigger: GTTTTCCCGCTGCAGCACAGAGGCGAGTGGTTTCCATGGCTGCAAAGCCAGAAATACTTGCTGTCTGGCCCTTGACAGAAAAGACTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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| CDS CCA 72 bp | AGACAACGCACACGCATGGCTGGAGTTTCTAGGCCCTaGTTTAAGCTCTTCCTGCACTTCAGACACATCCTT | + |
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Preference number: 6 (lower is better) Translates to: RQRTRMAGVSRP*FKLFLHFRHIL Trigger: AAGGATGTGTCTGAAGTGCAGGAAGAGCTTAAACCAGGGCCTAGAAACTCCAGCCATGCGTGTGCGTTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000466175.5 ENST00000505551.5 |
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| CDS GCA 72 bp | ACGAGGCTGACTTGGTGCCCAACTCAAATCGTAACATaGAGGATGCCAGCTCTGAGACACAATTTCAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TRLTWCPTQIVT*RMPALRHNFRC Trigger: ACACCTGAAATTGTGTCTCAGAGCTGGCATCCTGCATGTTACGATTTGAGTTGGGCACCAAGTCAGCCTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505551.5 |
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