RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LEPR (Homo sapiens)

Ensembl gene IDs: ENSG00000116678

Ensembl transcript IDs: ENST00000344610.12, ENST00000349533.11, ENST00000371058.1, ENST00000371059.7, ENST00000371060.7, ENST00000462765.5, ENST00000616738.4

Found 486 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGGTCCCGTCAATCTGACCTGGGTATGTAGGGTCATCCTGATATaGACTGTAACTCCCACTGTCCTGTGGGCAGCACAAACACAACTT +
Preference number: 1 (lower is better)
Translates to: SGPVNLTWVCRVILI*TVTPTVLWAAQTQL
Trigger: AAGTTGTGTTTGTGCTGCCCACAGGACAGTGGGAGTTACAGTTCATATCAGGATGACCCTACATACCCAGGTCAGATTGACGGGACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR TCA 90 bp CATCCACATCTAAGTGAGATGGAACTTTGTGGTTGCAGTATGTCTTaGTCCATCAGCATATTGTCCAACTCCGCCTGTGAGCCCTGTATG +
Preference number: 1 (lower is better)
Translates to: HPHLSEMELCGCSMS*SISILSNSACEPCM
Trigger: CATACAGGGCTCACAGGCGGAGTTGGACAATATGCTGATGGATCAAGACATACTGCAACCACAAAGTTCCATCTCACTTAGATGTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR GCA 90 bp ATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATaGTCAGAGGTCAGTCTTCAATTTCAGAGTGGGGCAAAATTTATT +
Preference number: 1 (lower is better)
Translates to: ILGPRSQENTVSQRT*SEVSLQFQSGAKFI
Trigger: AATAAATTTTGCCCCACTCTGAAATTGAAGACTGACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR GCA 90 bp GAACTGAGGCTGAACCAAGATGGTATCAATGATCTCAGGTTAATGTaGTGTCACTACATTTCTTTACACAGACCTACAGCACTACAGTGG +
Preference number: 1 (lower is better)
Translates to: ELRLNQDGINDLRLM*CHYISLHRPTALQW
Trigger: CCACTGTAGTGCTGTAGGTCTGTGTAAAGAAATGTAGTGACAGCACATTAACCTGAGATCATTGATACCATCTTGGTTCAGCCTCAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR TCA 90 bp TGTTCACTTATCTGGGGAACTGAGGCTGAACCAAGATGGTATCAATaGTCTCAGGTTAATGTGCTGTCACTACATTTCTTTACACAGACC +
Preference number: 1 (lower is better)
Translates to: CSLIWGTEAEPRWYQ*SQVNVLSLHFFTQT
Trigger: GGTCTGTGTAAAGAAATGTAGTGACAGCACATTAACCTGAGATCATTGATACCATCTTGGTTCAGCCTCAGTTCCCCAGATAAGTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR CCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTaGAAACAAGGGACCTTCCCACTAGAGCTTGGGAATAAAATAGAA +
Preference number: 1 (lower is better)
Translates to: NYISQKMVSVGLISS*KQGTFPLELGNKIE
Trigger: TTCTATTTTATTCCCAAGCTCTAGTGGGAAGGTCCCTTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR GCA 90 bp TGCTTGTGTTGTCATCAAAATACTGATTGTGGGCATCACCATTCTTaGAGGTTATTTCATTCTATGGTACATATCTTAGATTTGGTACAT +
Preference number: 1 (lower is better)
Translates to: CLCCHQNTDCGHHHS*RLFHSMVHILDLVH
Trigger: ATGTACCAAATCTAAGATATGTACCATAGAATGAAATAACCTGCAAGAATGGTGATGCCCACAATCAGTATTTTGATGACAACACAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACTGGTCCCGTCAATCTaGCCTGGGTATGTAGGGTCA +
Preference number: 2 (lower is better)
Translates to: LPISLPARGLGWFSGSKLLVPSI*PGYVGS
Trigger: TGACCCTACATACCCAGGTCAGATTGACGGGACCAG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAGGGTCATCCTGATATaGACTGTAACTCCCACTGTC +
Preference number: 2 (lower is better)
Translates to: LPISLPARGLGWFSGSKLRVILI*TVTPTV
Trigger: GACAGTGGGAGTTACAGTTCATATCAGGATGACCCT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR CAA 90 bp CCTCACCATGAACTATTCATAAAAGCTCCAAAGAGTCTCCCTTTTTaGCATCACTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGT +
Preference number: 2 (lower is better)
Translates to: PHHELFIKAPKSLPF*HHCPFPCLPEVLDG
Trigger: ACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAGTGATGCAAAAAAGGGAGACTCTTTGGAGCTTTTATGAATAGTTCATGGTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR GCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCCATCAAGTAATGAGTTaGTATCAGCCCTTTACCTAT +
Preference number: 2 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVHQVMS*YQPFTY
Trigger: ATAGGTAAAGGGCTGATAGCAACTCATTACTTGATG...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAGGGCTTATTTCTAGCTaGAAACAAGGGACCTTCCCA +
Preference number: 2 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGGLISS*KQGTFP
Trigger: TGGGAAGGTCCCTTGTTTCCAGCTAGAAATAAGCCC...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAGACTGTTGGGAAGTTaGCACATTGGGTTCATCTGT +
Preference number: 2 (lower is better)
Translates to: LPISLPARGLGWFSGSKLRLLGS*HIGFIC
Trigger: ACAGATGAACCCAATGTGCCAACTTCCCAACAGTCT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR GCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAAGGCATGCACCACTGTaGCAGCCTCTACTTAATAAA +
Preference number: 2 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGRHAPL*QPLLNK
Trigger: TTTATTAAGTAGAGGCTGGCACAGTGGTGCATGCCT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTATGTCCAGGTGGGGATaGGGGAAGACAATTATTCCG +
Preference number: 2 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFMSRWG*GKTIIP
Trigger: CGGAATAATTGTCTTCCCCCATCCCCACCTGGACAT...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR TCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCCCCTTAGGCCAGGGCTaGATTCTGTTTATCTTAAAC +
Preference number: 2 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLPLGQG*ILFILN
Trigger: GTTTAAGATAAACAGAATTCAGCCCTGGCCTAAGGG...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCTGGTCCCGTCAATCTaGCCTGGGTATGTAGGGTCA +
Preference number: 2 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLVPSI*PGYVGS
Trigger: TGACCCTACATACCCAGGTCAGATTGACGGGACCAG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR GCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAGGGCATCACCATTCTTaGAGGTTATTTCATTCTATG +
Preference number: 2 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGGHHHS*RLFHSM
Trigger: CATAGAATGAAATAACCTGCAAGAATGGTGATGCCC...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGCCCATTTCCCTGCCTaGCAGAGGTCTTGGATGGTT +
Preference number: 2 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKAHFPA*QRSWMV
Trigger: AACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAATCACACATCCAAACTaGACTCAAATCTACATTTTG +
Preference number: 2 (lower is better)
Translates to: LPISLPARGLGWFSGSKLITHPN*TQIYIL
Trigger: CAAAATGTAGATTTGAGTCCAGTTTGGATGTGTGAT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGTCGATGTTCCCTTCTaGTCCCGTCAATCTGACCTG +
Preference number: 2 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKVDVPF*SRQSDL
Trigger: CAGGTCAGATTGACGGGACCAGAAGGGAACATCGAC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAATTAAACAAGAAAGCTaGATTAGAAGTCGATGTTCC +
Preference number: 2 (lower is better)
Translates to: LPISLPARGLGWFSGSKLIKQES*IRSRCS
Trigger: GGAACATCGACTTCTAATCCAGCTTTCTTGTTTAAT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR TCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCTTTAAATCTGAACTCTaGTTCCATCACCCACTGACT +
Preference number: 2 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLFKSEL*FHHPLT
Trigger: AGTCAGTGGGTGATGGAATCAGAGTTCAGATTTAAA...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR GCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTAGATCCAACAGAAGGTaGCTATTCATAGTGACATGT +
Preference number: 2 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFRSNRR*LFIVTC
Trigger: ACATGTCACTATGAATAGGCACCTTCTGTTGGATCT...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGATTGGTACATAACAATTaGCTCATTAGTCTTCACAAG +
Preference number: 2 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGLVHNN*LISLHK
Trigger: CTTGTGAAGACTAATGAGCCAATTGTTATGTACCAA...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAGGGTCATCCTGATATaGACTGTAACTCCCACTGTC +
Preference number: 2 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKRVILI*TVTPTV
Trigger: GACAGTGGGAGTTACAGTTCATATCAGGATGACCCT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR GCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGTGTCTCAGCGGACATaGTCAGAGGTCAGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTVSQRT*SEVSLQ
Trigger: TTGAAGACTGACCTCTGAGCATGTCCGCTGAGACAC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAGACTGTTGGGAAGTTaGCACATTGGGTTCATCTGT +
Preference number: 2 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKRLLGS*HIGFIC
Trigger: ACAGATGAACCCAATGTGCCAACTTCCCAACAGTCT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR TCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTTGGTCCTGGGACTGTTaGATTCACTCAAGTAAGATA +
Preference number: 2 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFWSWDC*IHSSKI
Trigger: TATCTTACTTGAGTGAATTCAACAGTCCCAGGACCA...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR TCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTGTTCAGCACTGTCCATaGAATAGTGCCTTGGAATTT +
Preference number: 2 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFVQHCP*NSALEF
Trigger: AAATTCCAAGGCACTATTTCATGGACAGTGCTGAAC...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGGGCTTCCTTTTAACTaGAACGGAAGTTATCACTTA +
Preference number: 2 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKGLPFN*NGSYHL
Trigger: TAAGTGATAACTTCCGTTTCAGTTAAAAGGAAGCCC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR GCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTCCTGTGAGCCCTGTATaGATAATTCTCAACTCTTAC +
Preference number: 2 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFPVSPV*IILNSY
Trigger: GTAAGAGTTGAGAATTATGCATACAGGGCTCACAGG...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR CAA 90 bp GAGCGTGTCTACATTGGTAGGCTTATGAAGGCTTTCTCAAATTTTTaGTCTATGTTACTAAGAGAGAACAAACAGACAACATTCATTTGG +
Preference number: 2 (lower is better)
Translates to: ERVYIGRLMKAFSNF*SMLLRENKQTTFIW
Trigger: CCAAATGAATGTTGTCTGTTTGTTCTCTCTTAGTAACATAGACAAAAAATTTGAGAAAGCCTTCATAAGCCTACCAATGTAGACACGCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR CAA 90 bp CACCATTCTTGCAGGTTATTTCATTCTATGGTACATATCTTAGATTaGGTACATAACAATTGGCTCATTAGTCTTCACAAGTATAACCCC +
Preference number: 2 (lower is better)
Translates to: HHSCRLFHSMVHILD*VHNNWLISLHKYNP
Trigger: GGGGTTATACTTGTGAAGACTAATGAGCCAATTGTTATGTACCAAATCTAAGATATGTACCATAGAATGAAATAACCTGCAAGAATGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTACATCTCACAAAAGATaGTGTCTGTTGGGCTTATTT +
Preference number: 2 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFTSHKR*CLLGLF
Trigger: AAATAAGCCCAACAGACACCATCTTTTGTGAGATGT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTATCTCACACTGGTATTaGAATTTCATCCAAGTCCTT +
Preference number: 2 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFISHWY*NFIQVL
Trigger: AAGGACTTGGATGAAATTCCAATACCAGTGTGAGAT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAAAAATATCTATCAAGTaGGGTCTGGAATCTTTGTCA +
Preference number: 2 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTKISIK*GLESLS
Trigger: TGACAAAGATTCCAGACCCCACTTGATAGATATTTT...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR GCA 72 bp CCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATaGTCAGAGGTCAGTCTTCAATTTCAGAGTGGGGCA +
Preference number: 3 (lower is better)
Translates to: PRSQENTVSQRT*SEVSLQFQSGA
Trigger: TGCCCCACTCTGAAATTGAAGACTGACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR TCA 72 bp GTCAATCTGACCTGGGTATGTAGGGTCATCCTGATATaGACTGTAACTCCCACTGTCCTGTGGGCAGCACAA +
Preference number: 3 (lower is better)
Translates to: VNLTWVCRVILI*TVTPTVLWAAQ
Trigger: TTGTGCTGCCCACAGGACAGTGGGAGTTACAGTTCATATCAGGATGACCCTACATACCCAGGTCAGATTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTATGGGAAGTTGGCACATaGGGTTCATCTGTAGTGATC +
Preference number: 3 (lower is better)
Translates to: LPISLPARGLGWFSGSKLWEVGT*GSSVVI
Trigger: GATCACTACAGATGAACCCAATGTGCCAACTTCCCA...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAATACTCTATAGACTGTaGGGAAGTTGGCACATTGGG +
Preference number: 3 (lower is better)
Translates to: LPISLPARGLGWFSGSKLILYRL*GSWHIG
Trigger: CCCAATGTGCCAACTTCCCAACAGTCTATAGAGTAT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR CAA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAAGGATAACAGTAAAATaGGGAGTCTCTTGTCTCGGT +
Preference number: 3 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGRITVK*GVSCLG
Trigger: ACCGAGACAAGAGACTCCCAATTTTACTGTTATCCT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CAA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGATGGGGTCTGGAATCTTaGTCATTGTTTAGAACTGCT +
Preference number: 3 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGWGLES*SLFRTA
Trigger: AGCAGTTCTAAACAATGACAAAGATTCCAGACCCCA...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR TCA 72 bp CTAAGTGAGATGGAACTTTGTGGTTGCAGTATGTCTTaGTCCATCAGCATATTGTCCAACTCCGCCTGTGAG +
Preference number: 3 (lower is better)
Translates to: LSEMELCGCSMS*SISILSNSACE
Trigger: CTCACAGGCGGAGTTGGACAATATGCTGATGGATCAAGACATACTGCAACCACAAAGTTCCATCTCACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR CCA 72 bp TCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTaGAAACAAGGGACCTTCCCACTAGAGCTTGGGAAT +
Preference number: 3 (lower is better)
Translates to: SQKMVSVGLISS*KQGTFPLELGN
Trigger: ATTCCCAAGCTCTAGTGGGAAGGTCCCTTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CAA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAATGATACTGATATTCTaGAAGGTCTTCTTGCCACTG +
Preference number: 3 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGMILIF*KVFLPL
Trigger: CAGTGGCAAGAAGACCTTCAAGAATATCAGTATCAT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR CCA 72 bp TCACTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATaGTTCAGTGGAAGTAAATTAGATTTAGGTCATAAT +
Preference number: 3 (lower is better)
Translates to: SLPISLPARGLG*FSGSKLDLGHN
Trigger: ATTATGACCTAAATCTAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAAAAGATGGTGTCTGTaGGGCTTATTTCTAGCTGGA +
Preference number: 3 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLKRWCL*GLFLAG
Trigger: TCCAGCTAGAAATAAGCCCAACAGACACCATCTTTT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CAA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTAGTACTGCACAGTGGTaGGTTTATGTAGACAGAATG +
Preference number: 3 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFSTAQW*VYVDRM
Trigger: CATTCTGTCTACATAAACCAACCACTGTGCAGTACT...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CAA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTTTCTTGAAGGTCTTCTaGCCACTGAACATCCAAATG +
Preference number: 3 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFFLKVF*PLNIQM
Trigger: CATTTGGATGTTCAGTGGCAAGAAGACCTTCAAGAA...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CAA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAAAAATTGGGAGTCTCTaGTCTCGGTCTAAATATGAA +
Preference number: 3 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGKIGSL*SRSKYE
Trigger: TTCATATTTAGACCGAGACAAGAGACTCCCAATTTT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGTGCCTGCCAGAGGTCTaGGATGGTTCAGTGGAAGTA +
Preference number: 3 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKCLPEV*DGSVEV
Trigger: TACTTCCACTGAACCATCCAAGACCTCTGGCAGGCA...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCACATCAAGTAATGAGTaGCTATCAGCCCTTTACCTA +
Preference number: 3 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLTSSNE*LSALYL
Trigger: TAGGTAAAGGGCTGATAGCAACTCATTACTTGATGT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR TCA 72 bp ATCTGGGGAACTGAGGCTGAACCAAGATGGTATCAATaGTCTCAGGTTAATGTGCTGTCACTACATTTCTTT +
Preference number: 3 (lower is better)
Translates to: IWGTEAEPRWYQ*SQVNVLSLHFF
Trigger: AAAGAAATGTAGTGACAGCACATTAACCTGAGATCATTGATACCATCTTGGTTCAGCCTCAGTTCCCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR GCA 72 bp TCAGCATATTGTCCAACTCCGCCTGTGAGCCCTGTATaGATAATTCTCAACTCTTACAGCCTAAAGTTTATT +
Preference number: 3 (lower is better)
Translates to: SAYCPTPPVSPV*IILNSYSLKFI
Trigger: AATAAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGTTGGACAATATGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGTGGGAAGTTGGCACATaGGGTTCATCTGTAGTGATC +
Preference number: 3 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKWEVGT*GSSVVI
Trigger: GATCACTACAGATGAACCCAATGTGCCAACTTCCCA...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR GCA 72 bp CTGAACCAAGATGGTATCAATGATCTCAGGTTAATGTaGTGTCACTACATTTCTTTACACAGACCTACAGCA +
Preference number: 3 (lower is better)
Translates to: LNQDGINDLRLM*CHYISLHRPTA
Trigger: TGCTGTAGGTCTGTGTAAAGAAATGTAGTGACAGCACATTAACCTGAGATCATTGATACCATCTTGGTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTGTGTGTGTGTGTGTGTaGGTACAAAACAAAAACTTG +
Preference number: 3 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFVCVCV*VQNKNL
Trigger: CAAGTTTTTGTTTTGTACCAACACACACACACACAC...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTTGGGCATCACCATTCTaGCAGGTTATTTCATTCTAT +
Preference number: 3 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFWASPF*QVISFY
Trigger: ATAGAATGAAATAACCTGCAAGAATGGTGATGCCCA...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR CCA 72 bp TCTATGGTACATATCTTAGATTTGGTACATAACAATTaGCTCATTAGTCTTCACAAGTATAACCCCTTAGGC +
Preference number: 3 (lower is better)
Translates to: SMVHILDLVHNN*LISLHKYNPLG
Trigger: GCCTAAGGGGTTATACTTGTGAAGACTAATGAGCCAATTGTTATGTACCAAATCTAAGATATGTACCATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR CCA 72 bp AAACCTTATTCTAAATCCAGAATCTCACACTGGTATTaGAATTTCATCCAAGTCCTTTTACCATTTGGTGAC +
Preference number: 3 (lower is better)
Translates to: KPYSKSRISHWY*NFIQVLLPFGD
Trigger: GTCACCAAATGGTAAAAGGACTTGGATGAAATTCCAATACCAGTGTGAGATTCTGGATTTAGAATAAGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
3UTR GCA 72 bp TGTCATCAAAATACTGATTGTGGGCATCACCATTCTTaGAGGTTATTTCATTCTATGGTACATATCTTAGAT +
Preference number: 3 (lower is better)
Translates to: CHQNTDCGHHHS*RLFHSMVHILD
Trigger: ATCTAAGATATGTACCATAGAATGAAATAACCTGCAAGAATGGTGATGCCCACAATCAGTATTTTGATGACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATCGCGCGCGCTCGGCTaGCCGTGGGCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQASRALG*PWALRW
Trigger: CCATCGCAGAGCCCACGGCCAGCCGAGCGCGCGCGA...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344610.12
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGACCGAAGGCAGAGATaGCGGCGGCGCCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQADRRQR*RRRRGS
Trigger: CGAGCCCCGGCGCCGCCGCCATCTCTGCCTTCGGTC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344610.12
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGCTGGCCGTGGGCTCTaGGATGGGGCCGCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFAGRGL*DGAAPN
Trigger: GTTCGGAGCGGCCCCATCGCAGAGCCCACGGCCAGC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344610.12
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCCGTGGGCTCTGCGATaGGGCCGCTCCGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFPWALR*GRSELL
Trigger: GAGGAGTTCGGAGCGGCCCCATCGCAGAGCCCACGG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344610.12
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCTCAGGGAGAGCAGGTaGGGCAGCGAGGTAGGACGT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFLRESR*GSEVGR
Trigger: ACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTATCGCGCGCGCTCGGCTaGCCGTGGGCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLSRALG*PWALRW
Trigger: CCATCGCAGAGCCCACGGCCAGCCGAGCGCGCGCGA...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616738.4
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACAGAGAAGTACACCTTaGTCCGGGGGTCCAACTCGA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAQRSTP*SGGPTR
Trigger: TCGAGTTGGACCCCCGGATCAAGGTGTACTTCTCTG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344610.12
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACTCTTGCCCCTCACCTaGACCTCATACGAAGACCCA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQALLPLT*TSYEDP
Trigger: TGGGTCTTCGTATGAGGTTCAGGTGAGGGGCAAGAG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGGCCATCCAGTCTCTTaGCCCTCACCTGAACCTCAT +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAGHPVS*PSPEPH
Trigger: ATGAGGTTCAGGTGAGGGGCAAGAGACTGGATGGCC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACTGCTTCCGGCTTCCTaGCACGGCCCGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLLLPAS*HGPGSL
Trigger: CAGGCTGCCCGGGCCGTGGCAGGAAGCCGGAAGCAG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371060.7
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGTCACTCCAGATTCCTaGGCCATCCAGTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAVTPDS*AIQSLA
Trigger: GGCAAGAGACTGGATGGCCCAGGAATCTGGAGTGAC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAACTGGATGGAGGCAGTaGCTTCACCACAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQATGWRQ*LHHRIR
Trigger: CCTGATTCTGTGGTGAAGCCACTGCCTCCATCCAGT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATGCTTTCACACTGGATaGAGGCAGTGGCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQACFHTG*RQWLHH
Trigger: GTGGTGAAGCCACTGCCTCCATCCAGTGTGAAAGCA...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGGCCATCCAGTCTCTTaGCCCTCACCTGAACCTCAT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFGHPVS*PSPEPH
Trigger: ATGAGGTTCAGGTGAGGGGCAAGAGACTGGATGGCC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGTCACTCCAGATTCCTaGGCCATCCAGTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFVTPDS*AIQSLA
Trigger: GGCAAGAGACTGGATGGCCCAGGAATCTGGAGTGAC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGACTGCACACAAGTCTaGAACTGGGAGACTGACAGA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQADCTQV*NWETDR
Trigger: TCTGTCAGTCTCCCAGTTCCAGACTTGTGTGCAGTC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAACCTCAATTGCAAAGTaGTTTCCGCAAGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQATSIAK*FPQVTG
Trigger: TCCAGTCACTTGCGGAAAGCACTTTGCAATTGAGGT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGTAACAGTATGTGCTTaGTCTGTCCACAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAVTVCA*SVHRKV
Trigger: CACTTTCCTGTGGACAGAGCAAGCACATACTGTTAC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAAACCGTAACAGTATGTaGTTGCTCTGTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQANRNSM*LLCPQE
Trigger: TTCCTGTGGACAGAGCAAGCACATACTGTTACGGTT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATGGAAATGGTACCAATaGTGGGCTGGACCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAWKWYQ*WAGPRN
Trigger: ATTTCTTGGTCCAGCCCACCATTGGTACCATTTCCA...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGACTGCACACAAGTCTaGAACTGGGAGACTGACAGA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFDCTQV*NWETDR
Trigger: TCTGTCAGTCTCCCAGTTCCAGACTTGTGTGCAGTC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGACAACTGTGTAGGCTaGATTGCTCCAATTACTCCA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQADNCVG*IAPITP
Trigger: TGGAGTAATTGGAGCAATCCAGCCTACACAGTTGTC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCCCAGGAACAATTCTTaGGGTTCGGAACATCTTCCC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFPRNNS*GSEHLP
Trigger: GGGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCGTAATCCCAGAACTTTaGGAGGCCAATGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVVIPEL*EANEGG
Trigger: TCCGCCCTCATTGGCCTCCCAAAGTTCTGGGATTAC...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGAAGTAGTCATAGGTTaGATTTGGTGGCATGCAAGA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAEVVIG*IWWHAR
Trigger: TCTTGCATGCCACCAAATTCAACCTATGACTACTTC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAACCATATTTATGGGCTaGACTGACATTAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQATIFMG*TDIRGD
Trigger: GTCACCTCTAATGTCAGTTCAGCCCATAAATATGGT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACCAGGCATTTTCTTCTaGAAATTAAGTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAPGIFF*KLSPCA
Trigger: GGCACAAGGACTTAATTTTCAGAAGAAAATGCCTGG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGGCATTCATGTTCATTaGAGCAGTACACTGCATCAT +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAGIHVH*SSTLHH
Trigger: ATGATGCAGTGTACTGCTGCAATGAACATGAATGCC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCTGAACAGCATAGACTaGACACAAGTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFLNSID*TQVWNW
Trigger: CCAGTTCCAGACTTGTGTGCAGTCTATGCTGTTCAG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACTGTGTAGGCTGGATTaGTCCAATTACTCCAATATC +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQALCRLD*SNYSNI
Trigger: GATATTGGAGTAATTGGAGCAATCCAGCCTACACAG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACCAGTAGTTCCTTTGTaGCAGGCATTTTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAPVVPL*QAFSSE
Trigger: TTCAGAAGAAAATGCCTGGCACAAAGGAACTACTGG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGTTGAGTTTGGCTGTTaGCACAGGCACAAGACATTC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFVEFGC*HRHKTF
Trigger: GAATGTCTTGTGCCTGTGCCAACAGCCAAACTCAAC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAAAATGGTACCAATGGTaGGCTGGACCAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAKWYQW*AGPRNL
Trigger: AAGATTTCTTGGTCCAGCCCACCATTGGTACCATTT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCAATAAAAGCTGGGCATaGTGGTGTGCCCGTAATCCC +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVNKSWA*WCARNP
Trigger: GGGATTACGGGCACACCACCATGCCCAGCTTTTATT...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACAGAGAAGTACACCTTaGTCCGGGGGTCCAACTCGA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLQRSTP*SGGPTR
Trigger: TCGAGTTGGACCCCCGGATCAAGGTGTACTTCTCTG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACTCTTGCCCCTCACCTaGACCTCATACGAAGACCCA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLLLPLT*TSYEDP
Trigger: TGGGTCTTCGTATGAGGTTCAGGTGAGGGGCAAGAG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAAGTGAACCTAGAGAGTaGTTGATCCTAATCCACATT +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQASEPRE*LILIHI
Trigger: AATGTGGATTAGGATCAATCACTCTCTAGGTTCACT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCTGAACACTGCACAATaGGTCATTTTTCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFLNTAQ*VIFHQG
Trigger: CCCCTGATGAAAAATGACTCATTGTGCAGTGTTCAG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACCATTGCAGGAAGTATaGTGGTTTATCACATATCTC +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAPLQEV*WFITYL
Trigger: GAGATATGTGATAAACCATCATACTTCCTGCAATGG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTATTTCCCACATCTTCTaGCCATGTTCCATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFISHIF*PCSIAG
Trigger: TCCTGCAATGGAACATGGTCAGAAGATGTGGGAAAT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTAACAGAAGCACCAATTaGATTGATGGCCAGAACCGT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFNRSTN*IDGQNR
Trigger: ACGGTTCTGGCCATCAATTCAATTGGTGCTTCTGTT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAAGGATAAGCACTGAGTaGCTGCACGATATTTACTTT +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQARISTE*LHDIYF
Trigger: AAAGTAAATATCGTGCAGTCACTCAGTGCTTATCCT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAATATTGGGTAAAGACTaGACTGGTACTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAILGKD*TGTSQW
Trigger: CCATTGAGAAGTACCAGTTCAGTCTTTACCCAATAT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGAGCAGTTTCTATCTTaGTCACTCCGAAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFEQFLS*SLRKQQ
Trigger: CTGTTGCTTTCGGAGTGAGCAAGATAGAAACTGCTC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGGCCATCCAGTCTCTTaGCCCTCACCTGAACCTCAT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLGHPVS*PSPEPH
Trigger: ATGAGGTTCAGGTGAGGGGCAAGAGACTGGATGGCC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAATTGCAGCAGTACACTaGATCATAGGTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAIAAVH*IIGKLS
Trigger: GGAAAGTTTACCTATGATGCAGTGTACTGCTGCAAT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTACCTCAATTGCAAAGTaGTTTCCGCAAGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFTSIAK*FPQVTG
Trigger: TCCAGTCACTTGCGGAAAGCACTTTGCAATTGAGGT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACTGACCATGTTCCATTaGAGGAAGTATGATGGTTTA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQALTMFH*RKYDGL
Trigger: TAAACCATCATACTTCCTGCAATGGAACATGGTCAG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTAACCGTAACAGTATGTaGTTGCTCTGTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFNRNSM*LLCPQE
Trigger: TTCCTGTGGACAGAGCAAGCACATACTGTTACGGTT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGCCCATTTCCCTGCCTaGCAGAGGTCTTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLAHFPA*QRSWMV
Trigger: AACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACACTGCCCATTTCCCTaGCTGCCAGAGGTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLHCPFP*LPEVLD
Trigger: ATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAGTG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACTCCGAAAGCAACAGTaGAAAGTTGTTTTGGATAAG +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQALRKQQ*KVVLDK
Trigger: CTTATCCAAAACAACTTTCCACTGTTGCTTTCGGAG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGACATTAGAGGTGACTaGAAAATTACTCCACCAGAT +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQADIRGD*KITPPD
Trigger: ATCTGGTGGAGTAATTTTCCAGTCACCTCTAATGTC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGCTTCACCATATTTATaGGCTGAACTGACATTAGAG +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAASPYL*AELTLE
Trigger: CTCTAATGTCAGTTCAGCCCATAAATATGGTGAAGC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTTGGAAATGGTACCAATaGTGGGCTGGACCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFWKWYQ*WAGPRN
Trigger: ATTTCTTGGTCCAGCCCACCATTGGTACCATTTCCA...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGTCACTCCAGATTCCTaGGCCATCCAGTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLVTPDS*AIQSLA
Trigger: GGCAAGAGACTGGATGGCCCAGGAATCTGGAGTGAC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGCAAATAGCAATCTTTaGGCTCAGATATGGGATGAA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAANSNL*AQIWDE
Trigger: TTCATCCCATATCTGAGCCCAAAGATTGCTATTTGC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGACAACTGTGTAGGCTaGATTGCTCCAATTACTCCA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFDNCVG*IAPITP
Trigger: TGGAGTAATTGGAGCAATCCAGCCTACACAGTTGTC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACTCTTGCCCCTCACCTaGACCTCATACGAAGACCCA +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGLLPLT*TSYEDP
Trigger: TGGGTCTTCGTATGAGGTTCAGGTGAGGGGCAAGAG...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGTAACTTTGCTAACATaGTCACTCACAACATCATAC +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAVTLLT*SLTTSY
Trigger: GTATGATGTTGTGAGTGATCATGTTAGCAAAGTTAC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCTGGATTGTACTGGTTaGCCATCTGCAAGTCATTTT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFLDCTG*PSASHF
Trigger: AAAATGACTTGCAGATGGTCAACCAGTACAATCCAG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGAGACTGACAGATTTTaGTTTTGCATCATAAACCTC +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAETDRF*FCIINL
Trigger: GAGGTTTATGATGCAAAATCAAAATCTGTCAGTCTC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCAAGGGGGTCATTAGTTaGGTATGTGAGATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVKGVIS*VCEILR
Trigger: TCTCAGGATCTCACATACTCAACTAATGACCCCCTT...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGCTGGCCGTGGGCTCTaGGATGGGGCCGCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKAGRGL*DGAAPN
Trigger: GTTCGGAGCGGCCCCATCGCAGAGCCCACGGCCAGC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616738.4
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATCTGTGATTTCCATATaGAAACCTAATGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQASVISI*KPNGGS
Trigger: TGATCCACCATTAGGTTTGCATATGGAAATCACAGA...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCCAGTAGTTCCTTTGTaGCAGGCATTTTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFPVVPL*QAFSSE
Trigger: TTCAGAAGAAAATGCCTGGCACAAAGGAACTACTGG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTATATTGAAGTGGAAATaGTACCAATGGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFILKWK*YQWWAG
Trigger: TCCAGCCCACCATTGGTACCATTTCCACTTCAATAT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAACTGGATGGAGGCAGTaGCTTCACCACAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLTGWRQ*LHHRIR
Trigger: CCTGATTCTGTGGTGAAGCCACTGCCTCCATCCAGT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTATGCTTTCACACTGGATaGAGGCAGTGGCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLCFHTG*RQWLHH
Trigger: GTGGTGAAGCCACTGCCTCCATCCAGTGTGAAAGCA...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTAGCTTGTAATCACTaGGTGATAGTATCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQALACNH*VIVSRK
Trigger: TTTCCTGGATACTATCACCCAGTGATTACAAGCTAA...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGTCGATGTTCCCTTCTaGTCCCGTCAATCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLVDVPF*SRQSDL
Trigger: CAGGTCAGATTGACGGGACCAGAAGGGAACATCGAC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCCTGGATTGTACTGGTTaGCCATCTGCAAGTCATTTT +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVLDCTG*PSASHF
Trigger: AAAATGACTTGCAGATGGTCAACCAGTACAATCCAG...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGGCTCAGATATGGGATaGATAGATGGAATATCAGAA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFGSDMG*IDGISE
Trigger: TTCTGATATTCCATCTATTCATCCCATATCTGAGCC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTAGTGAACCTAGAGAGTaGTTGATCCTAATCCACATT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFSEPRE*LILIHI
Trigger: AATGTGGATTAGGATCAATCACTCTCTAGGTTCACT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGAACTTTTATATCCATaGCAACTGTGTAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFELLYP*QLCRLD
Trigger: ATCCAGCCTACACAGTTGTCATGGATATAAAAGTTC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCCATTGCAGGAAGTATaGTGGTTTATCACATATCTC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFPLQEV*WFITYL
Trigger: GAGATATGTGATAAACCATCATACTTCCTGCAATGG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTAGGATAAGCACTGAGTaGCTGCACGATATTTACTTT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFRISTE*LHDIYF
Trigger: AAAGTAAATATCGTGCAGTCACTCAGTGCTTATCCT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCAACGTTTCTGGCTTCTaGAAATTAAGTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVNVSGF*KLSPCA
Trigger: GGCACAAGGACTTAATTTTCAGAAGCCAGAAACGTT...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCTGGTCCTGGGACTGTTaGATTCACTCAAGTAAGATA +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVWSWDC*IHSSKI
Trigger: TATCTTACTTGAGTGAATTCAACAGTCCCAGGACCA...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCATGAACACTGCAATTaGAGTGAACCATCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFHEHCN*SEPSEN
Trigger: GTTTTCAGATGGTTCACTGCAATTGCAGTGTTCATG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTATTGCAGCAGTACACTaGATCATAGGTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFIAAVH*IIGKLS
Trigger: GGAAAGTTTACCTATGATGCAGTGTACTGCTGCAAT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACATATCTCTGAACACTaGACAATGAGTCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAHISEH*TMSHFS
Trigger: TGAAAAATGACTCATTGTGCAGTGTTCAGAGATATG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCCGTGGGCTCTGCGATaGGGCCGCTCCGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKPWALR*GRSELL
Trigger: GAGGAGTTCGGAGCGGCCCCATCGCAGAGCCCACGG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616738.4
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCTCCGAAAGCAACAGTaGAAAGTTGTTTTGGATAAG +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFLRKQQ*KVVLDK
Trigger: CTTATCCAAAACAACTTTCCACTGTTGCTTTCGGAG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGACATTAGAGGTGACTaGAAAATTACTCCACCAGAT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFDIRGD*KITPPD
Trigger: ATCTGGTGGAGTAATTTTCCAGTCACCTCTAATGTC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGTACCAATGGTGGGCTaGACCAAGAAATCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFVPMVG*TKKSLN
Trigger: ATTTAAAGATTTCTTGGTCCAGCCCACCATTGGTAC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGCAAATAGCAATCTTTaGGCTCAGATATGGGATGAA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFANSNL*AQIWDE
Trigger: TTCATCCCATATCTGAGCCCAAAGATTGCTATTTGC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAACTGGATGGAGGCAGTaGCTTCACCACAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGTGWRQ*LHHRIR
Trigger: CCTGATTCTGTGGTGAAGCCACTGCCTCCATCCAGT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAATTCTCTGGAAAGACTaGCTTTTCCCAAGATATTTT +
Preference number: 4 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAILWKD*LFPRYF
Trigger: AAAATATCTTGGGAAAAGCCAGTCTTTCCAGAGAAT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGACTGCACACAAGTCTaGAACTGGGAGACTGACAGA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLDCTQV*NWETDR
Trigger: TCTGTCAGTCTCCCAGTTCCAGACTTGTGTGCAGTC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACCCAGGAACAATTCTTaGGGTTCGGAACATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLPRNNS*GSEHLP
Trigger: GGGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAACCATGTCTCCCGAACTaGGGCCGCGGCTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQPCLPN*GRGCFR
Trigger: CCGGAAGCAGCCGCGGCCCCAGTTCGGGAGACATGG...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCCATGTCTCCCGAACTaGGGCCGCGGCTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKPCLPN*GRGCFR
Trigger: CCGGAAGCAGCCGCGGCCCCAGTTCGGGAGACATGG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371060.7
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTACATCATACTGGCTTTaGGGAATTTTCTCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFTSYWL*GIFSAK
Trigger: TTTAGCTGAGAAAATTCCTCAAAGCCAGTATGATGT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGTAACTTTGCTAACATaGTCACTCACAACATCATAC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFVTLLT*SLTTSY
Trigger: GTATGATGTTGTGAGTGATCATGTTAGCAAAGTTAC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGAGACTGACAGATTTTaGTTTTGCATCATAAACCTC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFETDRF*FCIINL
Trigger: GAGGTTTATGATGCAAAATCAAAATCTGTCAGTCTC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCGAACTTTTATATCCATaGCAACTGTGTAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVELLYP*QLCRLD
Trigger: ATCCAGCCTACACAGTTGTCATGGATATAAAAGTTC...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCAGGATAAGCACTGAGTaGCTGCACGATATTTACTTT +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVRISTE*LHDIYF
Trigger: AAAGTAAATATCGTGCAGTCACTCAGTGCTTATCCT...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTTTAAAGGATAAGCACTaGGTGACTGCACGATATTTA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFLKDKH*VTARYL
Trigger: TAAATATCGTGCAGTCACTCAGTGCTTATCCTTTAA...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACTGAACAGCATAGACTaGACACAAGTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLLNSID*TQVWNW
Trigger: CCAGTTCCAGACTTGTGTGCAGTCTATGCTGTTCAG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCCCGAGATCACATCACTaGACTCCAGCTGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLPRSHH*TPAGQQ
Trigger: CTGTTGCCCAGCTGGAGTGCAGTGATGTGATCTCGG...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGTTGAGTTTGGCTGTTaGCACAGGCACAAGACATTC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLVEFGC*HRHKTF
Trigger: GAATGTCTTGTGCCTGTGCCAACAGCCAAACTCAAC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTTTAGCTTGTAATCACTaGGTGATAGTATCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFLACNH*VIVSRK
Trigger: TTTCCTGGATACTATCACCCAGTGATTACAAGCTAA...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACTGAACACTGCACAATaGGTCATTTTTCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLLNTAQ*VIFHQG
Trigger: CCCCTGATGAAAAATGACTCATTGTGCAGTGTTCAG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAATTTCCCACATCTTCTaGCCATGTTCCATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLISHIF*PCSIAG
Trigger: TCCTGCAATGGAACATGGTCAGAAGATGTGGGAAAT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAACAGAAGCACCAATTaGATTGATGGCCAGAACCGT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLNRSTN*IDGQNR
Trigger: ACGGTTCTGGCCATCAATTCAATTGGTGCTTCTGTT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCAAACAACACGCCCTCTaGAAAAACAATTACATCTCA +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVKQHAL*KNNYIS
Trigger: TGAGATGTAATTGTTTTTTCAGAGGGCGTGTTGTTT...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCTCTGTGATTTCCATATaGAAACCTAATGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVSVISI*KPNGGS
Trigger: TGATCCACCATTAGGTTTGCATATGGAAATCACAGA...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTAGATTGGCTGGAAAATaGATTCATAAAAACCATCAC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFRLAGK*IHKNHH
Trigger: GTGATGGTTTTTATGAATGCATTTTCCAGCCAATCT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR GCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTAAACAATCACACAACTaGTGTTTAAAGGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFKQSHN*CLKDKH
Trigger: GTGCTTATCCTTTAAACAGCAGTTGTGTGATTGTTT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTATGGAAATGGTACCAATaGTGGGCTGGACCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLWKWYQ*WAGPRN
Trigger: ATTTCTTGGTCCAGCCCACCATTGGTACCATTTCCA...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTATTCTCTGGAAAGACTaGCTTTTCCCAAGATATTTT +
Preference number: 4 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFILWKD*LFPRYF
Trigger: AAAATATCTTGGGAAAAGCCAGTCTTTCCAGAGAAT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGACAACTGTGTAGGCTaGATTGCTCCAATTACTCCA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLDNCVG*IAPITP
Trigger: TGGAGTAATTGGAGCAATCCAGCCTACACAGTTGTC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCTTAGCTTGTAATCACTaGGTGATAGTATCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVLACNH*VIVSRK
Trigger: TTTCCTGGATACTATCACCCAGTGATTACAAGCTAA...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCATCTCACACTGGTATTaGAATTTCATCCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVISHWY*NFIQVL
Trigger: AAGGACTTGGATGAAATTCCAATACCAGTGTGAGAT...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGAAGTAGTCATAGGTTaGATTTGGTGGCATGCAAGA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLEVVIG*IWWHAR
Trigger: TCTTGCATGCCACCAAATTCAACCTATGACTACTTC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAACCATATTTATGGGCTaGACTGACATTAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLTIFMG*TDIRGD
Trigger: GTCACCTCTAATGTCAGTTCAGCCCATAAATATGGT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACTGGATTGTACTGGTTaGCCATCTGCAAGTCATTTT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLLDCTG*PSASHF
Trigger: AAAATGACTTGCAGATGGTCAACCAGTACAATCCAG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAATTTCCCACATCTTCTaGCCATGTTCCATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGISHIF*PCSIAG
Trigger: TCCTGCAATGGAACATGGTCAGAAGATGTGGGAAAT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTTGGGCACGATACCCTTaGCTTGTCAGTCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFWARYP*LVSQKH
Trigger: GTGCTTTTGACTGACAAGTCAAGGGTATCGTGCCCA...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAGGTTGCAGTATGTCTTaGTCCATCAGCATATTGTCC +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGGCSMS*SISILS
Trigger: GGACAATATGCTGATGGATCAAGACATACTGCAACC...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAGTTCGCCTAACATTGTaGTTAGATGCAGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGVRLTL*LDAGVL
Trigger: AAGCACACCTGCATCTAATCACAATGTTAGGCGAAC...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAATGTCCGTTCTCTTCTaGAAATTAAGTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLMSVLF*KLSPCA
Trigger: GGCACAAGGACTTAATTTTCAGAAGAGAACGGACAT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACTGTGTAGGCTGGATTaGTCCAATTACTCCAATATC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLLCRLD*SNYSNI
Trigger: GATATTGGAGTAATTGGAGCAATCCAGCCTACACAG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAGTAACAGTATGTGCTTaGTCTGTCCACAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGVTVCA*SVHRKV
Trigger: CACTTTCCTGTGGACAGAGCAAGCACATACTGTTAC...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAAACCGTAACAGTATGTaGTTGCTCTGTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGNRNSM*LLCPQE
Trigger: TTCCTGTGGACAGAGCAAGCACATACTGTTACGGTT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTGTGTCTCAGCGGACATaGTCAGAGGTCAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFVSQRT*SEVSLQ
Trigger: TTGAAGACTGACCTCTGAGCATGTCCGCTGAGACAC...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAAATGGTACCAATGGTaGGCTGGACCAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLKWYQW*AGPRNL
Trigger: AAGATTTCTTGGTCCAGCCCACCATTGGTACCATTT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGACTGCACACAAGTCTaGAACTGGGAGACTGACAGA +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLDCTQV*NWETDR
Trigger: TCTGTCAGTCTCCCAGTTCCAGACTTGTGTGCAGTC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTCCCAGGAACAATTCTTaGGGTTCGGAACATCTTCCC +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFPRNNS*GSEHLP
Trigger: GGGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGG...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCATGTCCAGGTGGGGATaGGGGAAGACAATTATTCCG +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLMSRWG*GKTIIP
Trigger: CGGAATAATTGTCTTCCCCCATCCCCACCTGGACAT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGATCTTTCCTGTTATTCTaGGTCCCAGATCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGSFLLF*VPDHRR
Trigger: TCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGCCAGAGGTCTTGGATaGTTCAGTGGAAGTAAATTA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLARGLG*FSGSKL
Trigger: TAATTTACTTCCACTGAACCATCCAAGACCTCTGGC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGGCTCAGATATGGGATaGATAGATGGAATATCAGAA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLGSDMG*IDGISE
Trigger: TTCTGATATTCCATCTATTCATCCCATATCTGAGCC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAGTGAACCTAGAGAGTaGTTGATCCTAATCCACATT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLSEPRE*LILIHI
Trigger: AATGTGGATTAGGATCAATCACTCTCTAGGTTCACT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGAACTTTTATATCCATaGCAACTGTGTAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLELLYP*QLCRLD
Trigger: ATCCAGCCTACACAGTTGTCATGGATATAAAAGTTC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACCATTGCAGGAAGTATaGTGGTTTATCACATATCTC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLPLQEV*WFITYL
Trigger: GAGATATGTGATAAACCATCATACTTCCTGCAATGG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAGGATAAGCACTGAGTaGCTGCACGATATTTACTTT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLRISTE*LHDIYF
Trigger: AAAGTAAATATCGTGCAGTCACTCAGTGCTTATCCT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAATATTGGGTAAAGACTaGACTGGTACTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLILGKD*TGTSQW
Trigger: CCATTGAGAAGTACCAGTTCAGTCTTTACCCAATAT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACCAAGATGGTATCAATaGTCTCAGGTTAATGTGCTG +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGPRWYQ*SQVNVL
Trigger: CAGCACATTAACCTGAGATCATTGATACCATCTTGG...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACTGACCATGTTCCATTaGAGGAAGTATGATGGTTTA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLLTMFH*RKYDGL
Trigger: TAAACCATCATACTTCCTGCAATGGAACATGGTCAG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGACATTAGAGGTGACTaGAAAATTACTCCACCAGAT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLDIRGD*KITPPD
Trigger: ATCTGGTGGAGTAATTTTCCAGTCACCTCTAATGTC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGCTTCACCATATTTATaGGCTGAACTGACATTAGAG +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLASPYL*AELTLE
Trigger: CTCTAATGTCAGTTCAGCCCATAAATATGGTGAAGC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGTACCAATGGTGGGCTaGACCAAGAAATCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLVPMVG*TKKSLN
Trigger: ATTTAAAGATTTCTTGGTCCAGCCCACCATTGGTAC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGCAAATAGCAATCTTTaGGCTCAGATATGGGATGAA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLANSNL*AQIWDE
Trigger: TTCATCCCATATCTGAGCCCAAAGATTGCTATTTGC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCTCTTGCCCCTCACCTaGACCTCATACGAAGACCCA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLLPLT*TSYEDP
Trigger: TGGGTCTTCGTATGAGGTTCAGGTGAGGGGCAAGAG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGTAACTTTGCTAACATaGTCACTCACAACATCATAC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLVTLLT*SLTTSY
Trigger: GTATGATGTTGTGAGTGATCATGTTAGCAAAGTTAC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAAGTGAACCTAGAGAGTaGTTGATCCTAATCCACATT +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGSEPRE*LILIHI
Trigger: AATGTGGATTAGGATCAATCACTCTCTAGGTTCACT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGAGACTGACAGATTTTaGTTTTGCATCATAAACCTC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLETDRF*FCIINL
Trigger: GAGGTTTATGATGCAAAATCAAAATCTGTCAGTCTC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTCTGAACACTGCACAATaGGTCATTTTTCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFLNTAQ*VIFHQG
Trigger: CCCCTGATGAAAAATGACTCATTGTGCAGTGTTCAG...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTGAATGTGAGGTGTGGTaGAATTATGTTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFECEVW*NYVGML
Trigger: CAGCATCCCAACATAATTTCACCACACCTCACATTC...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAATCCTTCTGAGAATGTaGGGTGTGGTGAAATTATGT +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGILLRM*GVVKLC
Trigger: ACATAATTTCACCACACCTCACATTCTCAGAAGGAT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTGGCAGGAGAATCGCTTaGACCTGGGAAGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFGRRIA*TWEAGV
Trigger: AACCCCTGCTTCCCAGGTTCAAGCGATTCTCCTGCC...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGAGCAGTTTCTATCTTaGTCACTCCGAAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLEQFLS*SLRKQQ
Trigger: CTGTTGCTTTCGGAGTGAGCAAGATAGAAACTGCTC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTATCTGTGATTTCCATATaGAAACCTAATGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLSVISI*KPNGGS
Trigger: TGATCCACCATTAGGTTTGCATATGGAAATCACAGA...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGGCCATCCAGTCTCTTaGCCCTCACCTGAACCTCAT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKGHPVS*PSPEPH
Trigger: ATGAGGTTCAGGTGAGGGGCAAGAGACTGGATGGCC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACTGACCATGTTCCATTaGAGGAAGTATGATGGTTTA +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGLTMFH*RKYDGL
Trigger: TAAACCATCATACTTCCTGCAATGGAACATGGTCAG...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCACTGCCCATTTCCCTaGCTGCCAGAGGTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKHCPFP*LPEVLD
Trigger: ATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAGTG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCTGGAAATGGTACCAATaGTGGGCTGGACCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLWKWYQ*WAGPRN
Trigger: ATTTCTTGGTCCAGCCCACCATTGGTACCATTTCCA...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGTCACTCCAGATTCCTaGGCCATCCAGTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKVTPDS*AIQSLA
Trigger: GGCAAGAGACTGGATGGCCCAGGAATCTGGAGTGAC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCACCATATTTATGGGCTaGACTGACATTAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLTIFMG*TDIRGD
Trigger: GTCACCTCTAATGTCAGTTCAGCCCATAAATATGGT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAACATCATACTGGCTTTaGGGAATTTTCTCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGTSYWL*GIFSAK
Trigger: TTTAGCTGAGAAAATTCCTCAAAGCCAGTATGATGT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTATTTTCTACAAAGTGTaGGCAACTGTCCTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFIFYKV*ATVLEN
Trigger: GTTCTCCAGGACAGTTGCTCACACTTTGTAGAAAAT...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTTCATCCACATCTAAGTaGGATGGAACTTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFSSTSK*DGTLWL
Trigger: CAACCACAAAGTTCCATCTCACTTAGATGTGGATGA...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTGGCCATCCAGTCTCTTaGCCCTCACCTGAACCTCAT +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFGHPVS*PSPEPH
Trigger: ATGAGGTTCAGGTGAGGGGCAAGAGACTGGATGGCC...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAGATTGGCTGGAAAATaGATTCATAAAAACCATCAC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLRLAGK*IHKNHH
Trigger: GTGATGGTTTTTATGAATGCATTTTCCAGCCAATCT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACATATCTCTGAACACTaGACAATGAGTCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLHISEH*TMSHFS
Trigger: TGAAAAATGACTCATTGTGCAGTGTTCAGAGATATG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAAACAATCACACAACTaGTGTTTAAAGGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLKQSHN*CLKDKH
Trigger: GTGCTTATCCTTTAAACAGCAGTTGTGTGATTGTTT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATCAAGTAATGAGTTaGTATCAGCCCTTTACCTAT +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGHQVMS*YQPFTY
Trigger: ATAGGTAAAGGGCTGATAGCAACTCATTACTTGATG...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAGCAAATACTGTAAATaGCTTCCAATGCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLSKYCK*LPMHSD
Trigger: ATCTGAATGCATTGGAAGGCATTTACAGTATTTGCT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGTCACTCCAGATTCCTaGGCCATCCAGTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTVTPDS*AIQSLA
Trigger: GGCAAGAGACTGGATGGCCCAGGAATCTGGAGTGAC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGACTGGATGGAGGCAGTaGCTTCACCACAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKTGWRQ*LHHRIR
Trigger: CCTGATTCTGTGGTGAAGCCACTGCCTCCATCCAGT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGTGCTTTCACACTGGATaGAGGCAGTGGCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKCFHTG*RQWLHH
Trigger: GTGGTGAAGCCACTGCCTCCATCCAGTGTGAAAGCA...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAATTCTCTGGAAAGACTaGCTTTTCCCAAGATATTTT +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLILWKD*LFPRYF
Trigger: AAAATATCTTGGGAAAAGCCAGTCTTTCCAGAGAAT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAATGCTCAAACGTTTCTaGCTTCTGAAAATTAAGTCC +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGMLKRF*LLKIKS
Trigger: GGACTTAATTTTCAGAAGCCAGAAACGTTTGAGCAT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAATTAAACATAGTCGTTaGTTTGGTTTGAATGTGAGC +
Preference number: 4 (lower is better)
Translates to: LPISLPARGLGWFSGSKLIKHSR*FGLNVS
Trigger: GCTCACATTCAAACCAAACCAACGACTATGTTTAAT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTGGCTCAGATATGGGATaGATAGATGGAATATCAGAA +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFGSDMG*IDGISE
Trigger: TTCTGATATTCCATCTATTCATCCCATATCTGAGCC...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCTTGTCATCAAAATACTaGTTGTGGGCATCACCATTC +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLLSSKY*LWASPF
Trigger: GAATGGTGATGCCCACAATCAGTATTTTGATGACAA...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCATTGCAGCAGTACACTaGATCATAGGTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLIAAVH*IIGKLS
Trigger: GGAAAGTTTACCTATGATGCAGTGTACTGCTGCAAT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAAGATTGGCTGGAAAATaGATTCATAAAAACCATCAC +
Preference number: 4 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGRLAGK*IHKNHH
Trigger: GTGATGGTTTTTATGAATGCATTTTCCAGCCAATCT...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCTGTCATAAAGTACACTaGTTTCTCTGTGACTTTGGG +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLCHKVH*FLCDFG
Trigger: CCCAAAGTCACAGAGAAAGCAGTGTACTTTATGACA...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGACATTAGAGGTGACTaGAAAATTACTCCACCAGAT +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLDIRGD*KITPPD
Trigger: ATCTGGTGGAGTAATTTTCCAGTCACCTCTAATGTC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGCAAATAGCAATCTTTaGGCTCAGATATGGGATGAA +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLANSNL*AQIWDE
Trigger: TTCATCCCATATCTGAGCCCAAAGATTGCTATTTGC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACATGCTTTCACACTGGATaGAGGCAGTGGCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTCFHTG*RQWLHH
Trigger: GTGGTGAAGCCACTGCCTCCATCCAGTGTGAAAGCA...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGACTGCACACAAGTCTaGAACTGGGAGACTGACAGA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKDCTQV*NWETDR
Trigger: TCTGTCAGTCTCCCAGTTCCAGACTTGTGTGCAGTC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCCCAGGAACAATTCTTaGGGTTCGGAACATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKPRNNS*GSEHLP
Trigger: GGGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCTTCACCAGTTTCACTTaGTTTAGAGTTGCTGATCAG +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLFTSFT*FRVADQ
Trigger: CTGATCAGCAACTCTAAACCAAGTGAAACTGGTGAA...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGTAACTTTGCTAACATaGTCACTCACAACATCATAC +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLVTLLT*SLTTSY
Trigger: GTATGATGTTGTGAGTGATCATGTTAGCAAAGTTAC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGAGACTGACAGATTTTaGTTTTGCATCATAAACCTC +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLETDRF*FCIINL
Trigger: GAGGTTTATGATGCAAAATCAAAATCTGTCAGTCTC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGCAAACCCTGACATATaGTTTCTCTTCAAACAATCT +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLANPDI*FLFKQS
Trigger: AGATTGTTTGAAGAGAAATCATATGTCAGGGTTTGC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTAGTTCTCATACAGGCTaGTCATGTTTTAAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFSSHTG*SCFKLF
Trigger: GAACAACTTAAAACATGATCAGCCTGTATGAGAACT...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCTGAACAGCATAGACTaGACACAAGTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLNSID*TQVWNW
Trigger: CCAGTTCCAGACTTGTGTGCAGTCTATGCTGTTCAG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGTCACTGATGCTGTATaGTTGATAAAAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLVTDAV*LIKRCS
Trigger: TGAGCATCTTTTTATCAAGCATACAGCATCAGTGAC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGTTGAGTTTGGCTGTTaGCACAGGCACAAGACATTC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKVEFGC*HRHKTF
Trigger: GAATGTCTTGTGCCTGTGCCAACAGCCAAACTCAAC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACATGTGAGCAACTGTCCTaGAGAACTCTGATGTCCGTG +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTCEQLS*RTLMSV
Trigger: CACGGACATCAGAGTTCTCCAGGACAGTTGCTCACA...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAGGGCTTATTTCTAGCTaGAAACAAGGGACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQGLISS*KQGTFP
Trigger: TGGGAAGGTCCCTTGTTTCCAGCTAGAAATAAGCCC...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCACATCTCACAAAAGATaGTGTCTGTTGGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLTSHKR*CLLGLF
Trigger: AAATAAGCCCAACAGACACCATCTTTTGTGAGATGT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAAATCCAGTATTTCATaGCAGGTAGTTTTCACAAGG +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLKSSIS*QVVFTR
Trigger: CCTTGTGAAAACTACCTGCCATGAAATACTGGATTT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCTGAACACTGCACAATaGGTCATTTTTCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLNTAQ*VIFHQG
Trigger: CCCCTGATGAAAAATGACTCATTGTGCAGTGTTCAG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATTTCCCACATCTTCTaGCCATGTTCCATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKISHIF*PCSIAG
Trigger: TCCTGCAATGGAACATGGTCAGAAGATGTGGGAAAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAACAGAAGCACCAATTaGATTGATGGCCAGAACCGT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKNRSTN*IDGQNR
Trigger: ACGGTTCTGGCCATCAATTCAATTGGTGCTTCTGTT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAACCCTTAGGCCAGGGCTaGATTCTGTTTATCTTAAAC +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQPLGQG*ILFILN
Trigger: GTTTAAGATAAACAGAATTCAGCCCTGGCCTAAGGG...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAAGGTCTTCTTGCCACTaGACATCCAAATGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTRSSCH*TSKCAG
Trigger: ACCTGCACATTTGGATGTTCAGTGGCAAGAAGACCT...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGAGCAGTTTCTATCTTaGTCACTCCGAAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKEQFLS*SLRKQQ
Trigger: CTGTTGCTTTCGGAGTGAGCAAGATAGAAACTGCTC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAACCTCAATTGCAAAGTaGTTTCCGCAAGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQTSIAK*FPQVTG
Trigger: TCCAGTCACTTGCGGAAAGCACTTTGCAATTGAGGT...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGACCTCAATTGCAAAGTaGTTTCCGCAAGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKTSIAK*FPQVTG
Trigger: TCCAGTCACTTGCGGAAAGCACTTTGCAATTGAGGT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACACTGAACAGCATAGACTaGACACAAGTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTLNSID*TQVWNW
Trigger: CCAGTTCCAGACTTGTGTGCAGTCTATGCTGTTCAG...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGTAACAGTATGTGCTTaGTCTGTCCACAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKVTVCA*SVHRKV
Trigger: CACTTTCCTGTGGACAGAGCAAGCACATACTGTTAC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAACCGTAACAGTATGTaGTTGCTCTGTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKNRNSM*LLCPQE
Trigger: TTCCTGTGGACAGAGCAAGCACATACTGTTACGGTT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAAACAATCACACAACTaGTGTTTAAAGGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLKQSHN*CLKDKH
Trigger: GTGCTTATCCTTTAAACAGCAGTTGTGTGATTGTTT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCTTGAGGCATGTAAGATaGAAAAGTCTTCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLLRHVR*KSLLTR
Trigger: TCTAGTAAGAAGACTTTTGCATCTTACATGCCTCAA...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTGATCTCAGGTTAATGTaGTGTCACTACATTTCTTTA +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFDLRLM*CHYISL
Trigger: TAAAGAAATGTAGTGACAGCACATTAACCTGAGATC...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGTTGAGTTTGGCTGTTaGCACAGGCACAAGACATTC +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTVEFGC*HRHKTF
Trigger: GAATGTCTTGTGCCTGTGCCAACAGCCAAACTCAAC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGTGGAAATGGTACCAATaGTGGGCTGGACCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKWKWYQ*WAGPRN
Trigger: ATTTCTTGGTCCAGCCCACCATTGGTACCATTTCCA...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTATTCTCTGGAAAGACTaGCTTTTCCCAAGATATTTT +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFILWKD*LFPRYF
Trigger: AAAATATCTTGGGAAAAGCCAGTCTTTCCAGAGAAT...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGACAACTGTGTAGGCTaGATTGCTCCAATTACTCCA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKDNCVG*IAPITP
Trigger: TGGAGTAATTGGAGCAATCCAGCCTACACAGTTGTC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCTTGGTACATAACAATTaGCTCATTAGTCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLLVHNN*LISLHK
Trigger: CTTGTGAAGACTAATGAGCCAATTGTTATGTACCAA...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTAAAATATCTATCAAGTaGGGTCTGGAATCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFKISIK*GLESLS
Trigger: TGACAAAGATTCCAGACCCCACTTGATAGATATTTT...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGACCATATTTATGGGCTaGACTGACATTAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKTIFMG*TDIRGD
Trigger: GTCACCTCTAATGTCAGTTCAGCCCATAAATATGGT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAACAGAAGCACCAATTaGATTGATGGCCAGAACCGT +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFNRSTN*IDGQNR
Trigger: ACGGTTCTGGCCATCAATTCAATTGGTGCTTCTGTT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAGTTCAGCACTGTCCATaGAATAGTGCCTTGGAATTT +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQVQHCP*NSALEF
Trigger: AAATTCCAAGGCACTATTTCATGGACAGTGCTGAAC...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATGTCCGTTCTCTTCTaGAAATTAAGTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKMSVLF*KLSPCA
Trigger: GGCACAAGGACTTAATTTTCAGAAGAGAACGGACAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGGCATTCATGTTCATTaGAGCAGTACACTGCATCAT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKGIHVH*SSTLHH
Trigger: ATGATGCAGTGTACTGCTGCAATGAACATGAATGCC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCTGTGTAGGCTGGATTaGTCCAATTACTCCAATATC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLCRLD*SNYSNI
Trigger: GATATTGGAGTAATTGGAGCAATCCAGCCTACACAG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAGGCATGCACCACTGTaGCAGCCTCTACTTAATAAA +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFRHAPL*QPLLNK
Trigger: TTTATTAAGTAGAGGCTGGCACAGTGGTGCATGCCT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAACCTGTGAGCCCTGTATaGATAATTCTCAACTCTTAC +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQPVSPV*IILNSY
Trigger: GTAAGAGTTGAGAATTATGCATACAGGGCTCACAGG...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAAAATGGTACCAATGGTaGGCTGGACCAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQKWYQW*AGPRNL
Trigger: AAGATTTCTTGGTCCAGCCCACCATTGGTACCATTT...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAAATGGTACCAATGGTaGGCTGGACCAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKKWYQW*AGPRNL
Trigger: AAGATTTCTTGGTCCAGCCCACCATTGGTACCATTT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATATTGAAGTGGAAATaGTACCAATGGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKILKWK*YQWWAG
Trigger: TCCAGCCCACCATTGGTACCATTTCCACTTCAATAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGACAACTGTGTAGGCTaGATTGCTCCAATTACTCCA +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTDNCVG*IAPITP
Trigger: TGGAGTAATTGGAGCAATCCAGCCTACACAGTTGTC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAATTTGTTCACTTATCTaGGGAACTGAGGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQICSLI*GTEAEP
Trigger: TGGTTCAGCCTCAGTTCCCCAGATAAGTGAACAAAT...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAAGCTGTGGGAAGAAATaGGAAGTTCCTGACCATTCT +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTSCGKK*EVPDHS
Trigger: AGAATGGTCAGGAACTTCCCATTTCTTCCCACAGCT...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGCCAGAGGTCTTGGATaGTTCAGTGGAAGTAAATTA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKARGLG*FSGSKL
Trigger: TAATTTACTTCCACTGAACCATCCAAGACCTCTGGC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGAAGTAGTCATAGGTTaGATTTGGTGGCATGCAAGA +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTEVVIG*IWWHAR
Trigger: TCTTGCATGCCACCAAATTCAACCTATGACTACTTC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGGCTCAGATATGGGATaGATAGATGGAATATCAGAA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKGSDMG*IDGISE
Trigger: TTCTGATATTCCATCTATTCATCCCATATCTGAGCC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAGTGAACCTAGAGAGTaGTTGATCCTAATCCACATT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKSEPRE*LILIHI
Trigger: AATGTGGATTAGGATCAATCACTCTCTAGGTTCACT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGAACTTTTATATCCATaGCAACTGTGTAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKELLYP*QLCRLD
Trigger: ATCCAGCCTACACAGTTGTCATGGATATAAAAGTTC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAACCATTGCAGGAAGTATaGTGGTTTATCACATATCTC +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQPLQEV*WFITYL
Trigger: GAGATATGTGATAAACCATCATACTTCCTGCAATGG...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCCATTGCAGGAAGTATaGTGGTTTATCACATATCTC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKPLQEV*WFITYL
Trigger: GAGATATGTGATAAACCATCATACTTCCTGCAATGG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAGGATAAGCACTGAGTaGCTGCACGATATTTACTTT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKRISTE*LHDIYF
Trigger: AAAGTAAATATCGTGCAGTCACTCAGTGCTTATCCT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAATATTGGGTAAAGACTaGACTGGTACTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQILGKD*TGTSQW
Trigger: CCATTGAGAAGTACCAGTTCAGTCTTTACCCAATAT...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATATTGGGTAAAGACTaGACTGGTACTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKILGKD*TGTSQW
Trigger: CCATTGAGAAGTACCAGTTCAGTCTTTACCCAATAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAGGACCACATGTCACTaGTGCTGTATGCTTGATAAA +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFRTTCH*CCMLDK
Trigger: TTTATCAAGCATACAGCATCAGTGACATGTGGTCCT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGAAGCACTTGGTGACTaGACTATTTATAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTEALGD*TIYKPL
Trigger: CAAGGGCTTATAAATAGTTCAGTCACCAAGTGCTTC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAATTTAAATCTGAACTCTaGTTCCATCACCCACTGACT +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQFKSEL*FHHPLT
Trigger: AGTCAGTGGGTGATGGAATCAGAGTTCAGATTTAAA...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCATGAACACTGCAATTaGAGTGAACCATCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKHEHCN*SEPSEN
Trigger: GTTTTCAGATGGTTCACTGCAATTGCAGTGTTCATG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATTGCAGCAGTACACTaGATCATAGGTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKIAAVH*IIGKLS
Trigger: GGAAAGTTTACCTATGATGCAGTGTACTGCTGCAAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGGCATTCATGTTCATTaGAGCAGTACACTGCATCAT +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTGIHVH*SSTLHH
Trigger: ATGATGCAGTGTACTGCTGCAATGAACATGAATGCC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACACTGTGTAGGCTGGATTaGTCCAATTACTCCAATATC +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTLCRLD*SNYSNI
Trigger: GATATTGGAGTAATTGGAGCAATCCAGCCTACACAG...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCTGACCATGTTCCATTaGAGGAAGTATGATGGTTTA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLTMFH*RKYDGL
Trigger: TAAACCATCATACTTCCTGCAATGGAACATGGTCAG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAAGATCCAACAGAAGGTaGCTATTCATAGTGACATGT +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQRSNRR*LFIVTC
Trigger: ACATGTCACTATGAATAGGCACCTTCTGTTGGATCT...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCTCCGAAAGCAACAGTaGAAAGTTGTTTTGGATAAG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLRKQQ*KVVLDK
Trigger: CTTATCCAAAACAACTTTCCACTGTTGCTTTCGGAG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGACATTAGAGGTGACTaGAAAATTACTCCACCAGAT +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKDIRGD*KITPPD
Trigger: ATCTGGTGGAGTAATTTTCCAGTCACCTCTAATGTC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGCTTCACCATATTTATaGGCTGAACTGACATTAGAG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKASPYL*AELTLE
Trigger: CTCTAATGTCAGTTCAGCCCATAAATATGGTGAAGC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAATATTGAAGTGGAAATaGTACCAATGGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTILKWK*YQWWAG
Trigger: TCCAGCCCACCATTGGTACCATTTCCACTTCAATAT...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGCAAATAGCAATCTTTaGGCTCAGATATGGGATGAA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKANSNL*AQIWDE
Trigger: TTCATCCCATATCTGAGCCCAAAGATTGCTATTTGC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGACATCATACTGGCTTTaGGGAATTTTCTCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKTSYWL*GIFSAK
Trigger: TTTAGCTGAGAAAATTCCTCAAAGCCAGTATGATGT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGTAACTTTGCTAACATaGTCACTCACAACATCATAC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKVTLLT*SLTTSY
Trigger: GTATGATGTTGTGAGTGATCATGTTAGCAAAGTTAC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGTTAAAGGATAAGCACTaGGTGACTGCACGATATTTA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLKDKH*VTARYL
Trigger: TAAATATCGTGCAGTCACTCAGTGCTTATCCTTTAA...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACACATGAACACTGCAATTaGAGTGAACCATCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTHEHCN*SEPSEN
Trigger: GTTTTCAGATGGTTCACTGCAATTGCAGTGTTCATG...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGTCTGTGATTTCCATATaGAAACCTAATGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKSVISI*KPNGGS
Trigger: TGATCCACCATTAGGTTTGCATATGGAAATCACAGA...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGGGCATCACCATTCTTaGAGGTTATTTCATTCTATG +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTGHHHS*RLFHSM
Trigger: CATAGAATGAAATAACCTGCAAGAATGGTGATGCCC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACACTCCGAAAGCAACAGTaGAAAGTTGTTTTGGATAAG +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTLRKQQ*KVVLDK
Trigger: CTTATCCAAAACAACTTTCCACTGTTGCTTTCGGAG...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGCTTCACCATATTTATaGGCTGAACTGACATTAGAG +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTASPYL*AELTLE
Trigger: CTCTAATGTCAGTTCAGCCCATAAATATGGTGAAGC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTGTACCAATGGTGGGCTaGACCAAGAAATCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFVPMVG*TKKSLN
Trigger: ATTTAAAGATTTCTTGGTCCAGCCCACCATTGGTAC...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGTTAGCTTGTAATCACTaGGTGATAGTATCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLACNH*VIVSRK
Trigger: TTTCCTGGATACTATCACCCAGTGATTACAAGCTAA...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR TCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTTTAAAGGATAAGCACTaGGTGACTGCACGATATTTA +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFLKDKH*VTARYL
Trigger: TAAATATCGTGCAGTCACTCAGTGCTTATCCTTTAA...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAACACTGATATCTTCTaGAATTGTTTCAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFNTDIF*NCFRLQ
Trigger: TTGGAGCCTGAAACAATTTCAGAAGATATCAGTGTT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR TCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAGTTCTCATACAGGCTaGATATGTAACAATATCCCA +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFSSHTG*ICNNIP
Trigger: TGGGATATTGTTACATATTCAGCCTGTATGAGAACT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCATATCTCTGAACACTaGACAATGAGTCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKHISEH*TMSHFS
Trigger: TGAAAAATGACTCATTGTGCAGTGTTCAGAGATATG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAAACAATCACACAACTaGTGTTTAAAGGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKKQSHN*CLKDKH
Trigger: GTGCTTATCCTTTAAACAGCAGTTGTGTGATTGTTT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR GCA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAAACATTGTGATTAGATaGAGGTGTGCTTTACTGTTT +
Preference number: 4 (lower is better)
Translates to: NYISQKMVSVGLISSWKQNIVIR*RCALLF
Trigger: AAACAGTAAAGCACACCTGCATCTAATCACAATGTT...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAGAGACCACAGTTGTTaGCATCATCTCATCTTTATT +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFRDHSC*HHLIFI
Trigger: AATAAAGATGAGATGATGCCAACAACTGTGGTCTCT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTTCCAGAATCTCACACTaGTATTGGAATTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFSRISH*YWNFIQ
Trigger: TTGGATGAAATTCCAATACCAGTGTGAGATTCTGGA...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATCACACATCCAAACTaGACTCAAATCTACATTTTG +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKITHPN*TQIYIL
Trigger: CAAAATGTAGATTTGAGTCCAGTTTGGATGTGTGAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CCA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATTAAACAAGAAAGCTaGATTAGAAGTCGATGTTCC +
Preference number: 4 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKIKQES*IRSRCS
Trigger: GGAACATCGACTTCTAATCCAGCTTTCTTGTTTAAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
3UTR CAA 72 bp CTTATTTTGATGATACTGATATTCTTGAAGGTCTTCTaGCCACTGAACATCCAAATGTGCAGGTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: LILMILIFLKVF*PLNIQMCRFLN
Trigger: ATTAAGAAACCTGCACATTTGGATGTTCAGTGGCAAGAAGACCTTCAAGAATATCAGTATCATCAAAATAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR GCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTCATATCTCTGAACACTaGACAATGAGTCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFHISEH*TMSHFS
Trigger: TGAAAAATGACTCATTGTGCAGTGTTCAGAGATATG...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGTGGTGAAATTATGTTaGGATGCTGATCTGATAATA +
Preference number: 4 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTVVKLC*DADLII
Trigger: TATTATCAGATCAGCATCCCAACATAATTTCACCAC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CCA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAGATACATACATCCTTaGGCTGATGAAAACATCTAT +
Preference number: 4 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFRYIHP*ADENIY
Trigger: ATAGATGTTTTCATCAGCCCAAGGATGTATGTATCT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CCA 90 bp GGCGGCGGCGCCGGGGCTCGGGCACCTGCGTCGCGCGCGCTCGGCTaGCCGTGGGCTCTGCGATGGGGCCGCTCCGAACTCCTCGCCCAA +
Preference number: 5 (lower is better)
Translates to: GGGAGARAPASRALG*PWALRWGRSELLAQ
Trigger: TTGGGCGAGGAGTTCGGAGCGGCCCCATCGCAGAGCCCACGGCCAGCCGAGCGCGCGCGACGCAGGTGCCCGAGCCCCGGCGCCGCCGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344610.12
ENST00000462765.5
ENST00000616738.4
CDS CCA 90 bp GAAGTACACCTTGATCCGGGGGTCCAACTCGACCGAAGGCAGAGATaGCGGCGGCGCCGGGGCTCGGGCACCTGCGTCGCGCGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: EVHLDPGVQLDRRQR*RRRRGSGTCVARAR
Trigger: CCGAGCGCGCGCGACGCAGGTGCCCGAGCCCCGGCGCCGCCGCCATCTCTGCCTTCGGTCGAGTTGGACCCCCGGATCAAGGTGTACTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344610.12
ENST00000462765.5
ENST00000616738.4
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAAGAGTGTCGTTGAGTTaGGCTGTTGGCACAGGCACA +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQARVSLS*AVGTGT
Trigger: TGTGCCTGTGCCAACAGCCAAACTCAACGACACTCT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGCCCAGGAACAATTCTaGGGGTTCGGAACATCTTCC +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAAQEQF*GFGTSS
Trigger: GGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGGC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTTCAGAGAAGTACACCTaGATCCGGGGGTCCAACTCG +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFSEKYT*IRGSNS
Trigger: CGAGTTGGACCCCCGGATCAAGGTGTACTTCTCTGA...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344610.12
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACAGGAAGGACACATGTaGGTGGAGAGTCAAGTGAAC +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAQEGHM*VESQVN
Trigger: GTTCACTTGACTCTCCACCAACATGTGTCCTTCCTG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGGAGCAGTTTCTATCTaGCTCACTCCGAAAGCAACA +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAGAVSI*LTPKAT
Trigger: TGTTGCTTTCGGAGTGAGCAAGATAGAAACTGCTCC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTAGAGTGTCGTTGAGTTaGGCTGTTGGCACAGGCACA +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFRVSLS*AVGTGT
Trigger: TGTGCCTGTGCCAACAGCCAAACTCAACGACACTCT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAATAAGGAGAGTGTCGTaGAGTTTGGCTGTTGGCACA +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAIRRVS*SLAVGT
Trigger: TGTGCCAACAGCCAAACTCAACGACACTCTCCTTAT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACGTAACAGTATGTGCTaGCTCTGTCCACAGGAAAGT +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQARNSMC*LCPQES
Trigger: ACTTTCCTGTGGACAGAGCAAGCACATACTGTTACG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGCCCAGGAACAATTCTaGGGGTTCGGAACATCTTCC +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFAQEQF*GFGTSS
Trigger: GGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGGC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGTCTTTCCTTCAATGTaGTCTGCACATAAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAVFPSM*SAHKEQ
Trigger: CTGCTCCTTATGTGCAGACAACATTGAAGGAAAGAC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCAGGAAGGACACATGTaGGTGGAGAGTCAAGTGAAC +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFQEGHM*VESQVN
Trigger: GTTCACTTGACTCTCCACCAACATGTGTCCTTCCTG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAGAAGCACCAATTGAATaGATGGCCAGAACCGTAACA +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAEAPIE*MARTVT
Trigger: TGTTACGGTTCTGGCCATCAATTCAATTGGTGCTTC...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS TCA 90 bp CAGTCACTCCAGATTCCTGGGCCATCCAGTCTCTTGCCCCTCACCTaGACCTCATACGAAGACCCAGGAAGTATACTGTCTACTAGCAGG +
Preference number: 5 (lower is better)
Translates to: QSLQIPGPSSLLPLT*TSYEDPGSILSTSR
Trigger: CCTGCTAGTAGACAGTATACTTCCTGGGTCTTCGTATGAGGTTCAGGTGAGGGGCAAGAGACTGGATGGCCCAGGAATCTGGAGTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS GCA 90 bp GAGGAGTACTCCAGTCACTCCAGATTCCTGGGCCATCCAGTCTCTTaGCCCTCACCTGAACCTCATACGAAGACCCAGGAAGTATACTGT +
Preference number: 5 (lower is better)
Translates to: EEYSSHSRFLGHPVS*PSPEPHTKTQEVYC
Trigger: ACAGTATACTTCCTGGGTCTTCGTATGAGGTTCAGGTGAGGGGCAAGAGACTGGATGGCCCAGGAATCTGGAGTGACTGGAGTACTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAACTGGATTGTACTGGTaGACCATCTGCAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQATGLYW*TICKSF
Trigger: AAATGACTTGCAGATGGTCAACCAGTACAATCCAGT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCACCCAGTAGTTCCTTaGTGCCAGGCATTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFHPVVP*CQAFSS
Trigger: AGAAGAAAATGCCTGGCACAAAGGAACTACTGGGTG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS CCA 90 bp TTGTGTGGTAAAGACACGAGGAGTACTCCAGTCACTCCAGATTCCTaGGCCATCCAGTCTCTTGCCCCTCACCTGAACCTCATACGAAGA +
Preference number: 5 (lower is better)
Translates to: LCGKDTRSTPVTPDS*AIQSLAPHLNLIRR
Trigger: TCTTCGTATGAGGTTCAGGTGAGGGGCAAGAGACTGGATGGCCCAGGAATCTGGAGTGACTGGAGTACTCCTCGTGTCTTTACCACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGGAAGTAGTCATAGGTaGAATTTGGTGGCATGCAAG +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFGSSHR*NLVACK
Trigger: CTTGCATGCCACCAAATTCAACCTATGACTACTTCC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGTCTTTCCTTCAATGTaGTCTGCACATAAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFVFPSM*SAHKEQ
Trigger: CTGCTCCTTATGTGCAGACAACATTGAAGGAAAGAC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTTGGCATTCATGTTCATaGCAGCAGTACACTGCATCA +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFWHSCS*QQYTAS
Trigger: TGATGCAGTGTACTGCTGCAATGAACATGAATGCCA...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGAAGCACCAATTGAATaGATGGCCAGAACCGTAACA +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFEAPIE*MARTVT
Trigger: TGTTACGGTTCTGGCCATCAATTCAATTGGTGCTTC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCACTGAAAATTAAGTCCTaGTGCCCAGGAACAATTCTT +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQALKIKS*CPGTIL
Trigger: AAGAATTGTTCCTGGGCACAAGGACTTAATTTTCAG...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCTCACTTGGTTTAGAGTaGCTGATCAGCGTGGCGTAT +
Preference number: 5 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVSLGLE*LISVAY
Trigger: ATACGCCACGCTGATCAGCAACTCTAAACCAAGTGA...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTAGTCATAGGTTGAATTaGGTGGCATGCAAGACAACT +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFSHRLN*VACKTT
Trigger: AGTTGTCTTGCATGCCACCAAATTCAACCTATGACT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAGAGTGTCGTTGAGTTaGGCTGTTGGCACAGGCACA +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLRVSLS*AVGTGT
Trigger: TGTGCCTGTGCCAACAGCCAAACTCAACGACACTCT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTGTAGCTGAGACAATCTaGTCAGCTTCTCTGATAACT +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFVAETI*SASLIT
Trigger: AGTTATCAGAGAAGCTGACAAGATTGTCTCAGCTAC...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAAACTTTCCTCGAGGTTaGGTTTCATTCAGATTGAAA +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQANFPRG*VSFRLK
Trigger: TTTCAATCTGAATGAAACCAAACCTCGAGGAAAGTT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp GCACACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCAATAGCGAATCTGGAATaGAAGGTTATTCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: AHLRESRCGSEVGRSLQAIANLE*KVILWK
Trigger: TTTCCAGAGAATAACCTTCAATTCCAGATTCGCTAT...TGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGCCCAGGAACAATTCTaGGGGTTCGGAACATCTTCC +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLAQEQF*GFGTSS
Trigger: GGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGGC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCGTATTTAACAAAGGGTaGTCTCTGGCTTTCGTCCTC +
Preference number: 5 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVVFNKG*SLAFVL
Trigger: GAGGACGAAAGCCAGAGACAACCCTTTGTTAAATAC...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTATGCCTGCCAGAGGTCTaGGATGGTTCAGTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLCLPEV*DGSVEV
Trigger: TACTTCCACTGAACCATCCAAGACCTCTGGCAGGCA...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTAAAGTATATGACATCTaGTGTGGTAAAGACACGAGG +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFKVYDI*CGKDTR
Trigger: CCTCGTGTCTTTACCACACAAGATGTCATATACTTT...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTTGCACGATATTTACTTaGCTCATAGGCCATGAAAAG +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFCTIFT*LIGHEK
Trigger: CTTTTCATGGCCTATGAGCAAAGTAAATATCGTGCA...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CACCTCAGGGAGAGCAGGTGCGGCAGCGAGGTAGGACGTAGTCTACAAGCATTTCTGAAAATTAAGTCCTaGTGCCCAGGAACAATTCTT +
Preference number: 5 (lower is better)
Translates to: HLRESRCGSEVGRSLQAFLKIKS*CPGTIL
Trigger: AAGAATTGTTCCTGGGCACAAGGACTTAATTTTCAG...AAATGCTTGTAGACTACGTCCTACCTCGCTGCCGCACCTGCTCTCCCTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344610.12
ENST00000371058.1
CDS-3UTR CAA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCTGGTTGCAGTATGTCTaGATCCATCAGCATATTGTC +
Preference number: 5 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVWLQYV*IHQHIV
Trigger: GACAATATGCTGATGGATCAAGACATACTGCAACCA...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGGAGCAGTTTCTATCTaGCTCACTCCGAAAGCAACA +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLGAVSI*LTPKAT
Trigger: TGTTGCTTTCGGAGTGAGCAAGATAGAAACTGCTCC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACGTAACAGTATGTGCTaGCTCTGTCCACAGGAAAGT +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLRNSMC*LCPQES
Trigger: ACTTTCCTGTGGACAGAGCAAGCACATACTGTTACG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCTGCACGATATTTACTTaGCTCATAGGCCATGAAAAG +
Preference number: 5 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVCTIFT*LIGHEK
Trigger: CTTTTCATGGCCTATGAGCAAAGTAAATATCGTGCA...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGACATGCTCAGAGGTCAATCTCACACTGGTATaGGAATTTCATCCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LGPRSQENTVSQRTCSEVNLTLV*EFHPSP
Trigger: AGGACTTGGATGAAATTCCAATACCAGTGTGAGATT...GACCTCTGAGCATGTCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAAGAGTCTCCCTTTTTaGCATCACTGCCCATTTCCC +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLKSLPF*HHCPFP
Trigger: GGGAAATGGGCAGTGATGCAAAAAAGGGAGACTCTT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAGTCGTTGGTTTGGTTaGAATGTGAGCAACGCAGCA +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLSRWFG*NVSNAA
Trigger: TGCTGCGTTGCTCACATTCAAACCAAACCAACGACT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGGAAGTAGTCATAGGTaGAATTTGGTGGCATGCAAG +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLGSSHR*NLVACK
Trigger: CTTGCATGCCACCAAATTCAACCTATGACTACTTCC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGTCTTTCCTTCAATGTaGTCTGCACATAAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLVFPSM*SAHKEQ
Trigger: CTGCTCCTTATGTGCAGACAACATTGAAGGAAAGAC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGAGTGTCGTTGAGTTaGGCTGTTGGCACAGGCACA +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLRVSLS*AVGTGT
Trigger: TGTGCCTGTGCCAACAGCCAAACTCAACGACACTCT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTATGGCATTCATGTTCATaGCAGCAGTACACTGCATCA +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLWHSCS*QQYTAS
Trigger: TGATGCAGTGTACTGCTGCAATGAACATGAATGCCA...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGAAGCACCAATTGAATaGATGGCCAGAACCGTAACA +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLEAPIE*MARTVT
Trigger: TGTTACGGTTCTGGCCATCAATTCAATTGGTGCTTC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAGTCATAGGTTGAATTaGGTGGCATGCAAGACAACT +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLSHRLN*VACKTT
Trigger: AGTTGTCTTGCATGCCACCAAATTCAACCTATGACT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGAGGAAGTAGTCATAGGTaGAATTTGGTGGCATGCAAG +
Preference number: 5 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGGSSHR*NLVACK
Trigger: CTTGCATGCCACCAAATTCAACCTATGACTACTTCC...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAGTAGCTGAGACAATCTaGTCAGCTTCTCTGATAACT +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLVAETI*SASLIT
Trigger: AGTTATCAGAGAAGCTGACAAGATTGTCTCAGCTAC...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCCAGGAAGGACACATGTaGGTGGAGAGTCAAGTGAAC +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLQEGHM*VESQVN
Trigger: GTTCACTTGACTCTCCACCAACATGTGTCCTTCCTG...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTCGTAACAGTATGTGCTaGCTCTGTCCACAGGAAAGT +
Preference number: 5 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFRNSMC*LCPQES
Trigger: ACTTTCCTGTGGACAGAGCAAGCACATACTGTTACG...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTATGCACGATATTTACTTaGCTCATAGGCCATGAAAAG +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLCTIFT*LIGHEK
Trigger: CTTTTCATGGCCTATGAGCAAAGTAAATATCGTGCA...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTACTGAAAATTAAGTCCTaGTGCCCAGGAACAATTCTT +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLLKIKS*CPGTIL
Trigger: AAGAATTGTTCCTGGGCACAAGGACTTAATTTTCAG...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGATTCAACGGAGAATTTTaGCTAGAGAAGCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGFNGEF*LEKHLV
Trigger: CACCAAGTGCTTCTCTAGCAAAAATTCTCCGTTGAA...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGTCAGAGAAGTACACCTaGATCCGGGGGTCCAACTCG +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKSEKYT*IRGSNS
Trigger: CGAGTTGGACCCCCGGATCAAGGTGTACTTCTCTGA...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGCCCATTTCCCTGCCTGCCAGAGGTCTTGGATGGTTCAGTGGAAGTAAATTAAACTTTCCTCGAGGTTaGGTTTCATTCAGATTGAAA +
Preference number: 5 (lower is better)
Translates to: LPISLPARGLGWFSGSKLNFPRG*VSFRLK
Trigger: TTTCAATCTGAATGAAACCAAACCTCGAGGAAAGTT...TAATTTACTTCCACTGAACCATCCAAGACCTCTGGCAGGCAGGGAAATGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGTAGCTGAGACAATCTaGTCAGCTTCTCTGATAACT +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLVAETI*SASLIT
Trigger: AGTTATCAGAGAAGCTGACAAGATTGTCTCAGCTAC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGCCCAGGAACAATTCTaGGGGTTCGGAACATCTTCC +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKAQEQF*GFGTSS
Trigger: GGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGGC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp TCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGCGGATTGCTAGAGAAGCACTaGGTGACTGAACTATTTATA +
Preference number: 5 (lower is better)
Translates to: SFLLFWVPDHRRILCLSGLLEKH*VTELFI
Trigger: TATAAATAGTTCAGTCACCAAGTGCTTCTCTAGCAA...TCCGCTGAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGATGGAACTTTGTGGTaGCAGTATGTCTTGATCCAT +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLDGTLW*QYVLIH
Trigger: ATGGATCAAGACATACTGCAACCACAAAGTTCCATC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCAGGAAGGACACATGTaGGTGGAGAGTCAAGTGAAC +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKQEGHM*VESQVN
Trigger: GTTCACTTGACTCTCCACCAACATGTGTCCTTCCTG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGCCCAGGAACAATTCTaGGGGTTCGGAACATCTTCC +
Preference number: 5 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTAQEQF*GFGTSS
Trigger: GGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGGC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCCTGAAAATTAAGTCCTaGTGCCCAGGAACAATTCTT +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLLKIKS*CPGTIL
Trigger: AAGAATTGTTCCTGGGCACAAGGACTTAATTTTCAG...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCGTGTGTGTGTGTGTGTaGGTACAAAACAAAAACTTG +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLVCVCV*VQNKNL
Trigger: CAAGTTTTTGTTTTGTACCAACACACACACACACAC...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCTGGGCATCACCATTCTaGCAGGTTATTTCATTCTAT +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLWASPF*QVISFY
Trigger: ATAGAATGAAATAACCTGCAAGAATGGTGATGCCCA...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTATGATACTGATATTCTaGAAGGTCTTCTTGCCACTG +
Preference number: 5 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFMILIF*KVFLPL
Trigger: CAGTGGCAAGAAGACCTTCAAGAATATCAGTATCAT...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCCTGGAATCTTTGTCATaGTTTAGAACTGCTCACTTC +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLLESLS*FRTAHF
Trigger: GAAGTGAGCAGTTCTAAACAATGACAAAGATTCCAG...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS TCA 90 bp CCAATGGTGGGCTGGACCAAGAAATCTTTAAATTACCATCATCTGTaGTTTCCATATGCAAACCTAATGGTGGATCAGGCTTCACCATAT +
Preference number: 5 (lower is better)
Translates to: PMVGWTKKSLNYHHL*FPYANLMVDQASPY
Trigger: ATATGGTGAAGCCTGATCCACCATTAGGTTTGCATATGGAAATCACAGATGATGGTAATTTAAAGATTTCTTGGTCCAGCCCACCATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS TCA 90 bp CTCTGTCCACAGGAAAGTGAATTTCGTGTGATTTCCCACATCTTCTaGCCATGTTCCATTGCAGGAAGTATGATGGTTTATCACATATCT +
Preference number: 5 (lower is better)
Translates to: LCPQESEFRVISHIF*PCSIAGSMMVYHIS
Trigger: AGATATGTGATAAACCATCATACTTCCTGCAATGGAACATGGTCAGAAGATGTGGGAAATCACACGAAATTCACTTTCCTGTGGACAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAATAAGGAGAGTGTCGTaGAGTTTGGCTGTTGGCACA +
Preference number: 5 (lower is better)
Translates to: NYISQKMVSVGLISSWKQIRRVS*SLAVGT
Trigger: TGTGCCAACAGCCAAACTCAACGACACTCTCCTTAT...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATAAGGAGAGTGTCGTaGAGTTTGGCTGTTGGCACA +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKIRRVS*SLAVGT
Trigger: TGTGCCAACAGCCAAACTCAACGACACTCTCCTTAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCGTAACAGTATGTGCTaGCTCTGTCCACAGGAAAGT +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKRNSMC*LCPQES
Trigger: ACTTTCCTGTGGACAGAGCAAGCACATACTGTTACG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCACTATTTATAAGCCCTaGTTCTTCACCAGTTTCACT +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLTIYKP*FFTSFT
Trigger: AGTGAAACTGGTGAAGAACAAGGGCTTATAAATAGT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAACACGATACCCTTGACTaGTCAGTCAAAAGCACACCA +
Preference number: 5 (lower is better)
Translates to: NYISQKMVSVGLISSWKQHDTLD*SVKSTP
Trigger: TGGTGTGCTTTTGACTGACAAGTCAAGGGTATCGTG...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp AGTTTCTCTTTCCTGTTATTCTGGGTCCCAGATCACAGGAGAATACTGTGTCTCAGAACAAGTTTGGAATaGAGGCATGTAAGATGCAAA +
Preference number: 5 (lower is better)
Translates to: SFSFLLFWVPDHRRILCLRTSLE*RHVRCK
Trigger: TTTGCATCTTACATGCCTCAATTCCAAACTTGTTCT...GAGACACAGTATTCTCCTGTGATCTGGGACCCAGAATAACAGGAAAGAGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp ACTCCGCCTGTGAGCCCTGTATGCATAATTCTCAACTCTTACAGCCTAAAGTTTAAAATTGGGAGTCTCTaGTCTCGGTCTAAATATGAA +
Preference number: 5 (lower is better)
Translates to: TPPVSPVCIILNSYSLKFKIGSL*SRSKYE
Trigger: TTCATATTTAGACCGAGACAAGAGACTCCCAATTTT...AAACTTTAGGCTGTAAGAGTTGAGAATTATGCATACAGGGCTCACAGGCGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CCA 90 bp ACTCTGCAAATAGCAATCTTTGGGCTCAGATATGGGATGAATAGATaGAATATCAGAACAGTAAAGGCTGCTCCTATGATACCTCAATTG +
Preference number: 5 (lower is better)
Translates to: TLQIAIFGLRYGMNR*NIRTVKAAPMIPQL
Trigger: CAATTGAGGTATCATAGGAGCAGCCTTTACTGTTCTGATATTCCATCTATTCATCCCATATCTGAGCCCAAAGATTGCTATTTGCAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGGAAGTAGTCATAGGTaGAATTTGGTGGCATGCAAG +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKGSSHR*NLVACK
Trigger: CTTGCATGCCACCAAATTCAACCTATGACTACTTCC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAGGAGCAGTTTCTATCTaGCTCACTCCGAAAGCAACA +
Preference number: 5 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTGAVSI*LTPKAT
Trigger: TGTTGCTTTCGGAGTGAGCAAGATAGAAACTGCTCC...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAGAAGCACCAATTGAATaGATGGCCAGAACCGTAACA +
Preference number: 5 (lower is better)
Translates to: NYISQKMVSVGLISSWKQEAPIE*MARTVT
Trigger: TGTTACGGTTCTGGCCATCAATTCAATTGGTGCTTC...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGAAGCACCAATTGAATaGATGGCCAGAACCGTAACA +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKEAPIE*MARTVT
Trigger: TGTTACGGTTCTGGCCATCAATTCAATTGGTGCTTC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTATGGGCACGATACCCTaGACTTGTCAGTCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFMGTIP*TCQSKA
Trigger: TGCTTTTGACTGACAAGTCAAGGGTATCGTGCCCAT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATACTCTATAGACTGTaGGGAAGTTGGCACATTGGG +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKILYRL*GSWHIG
Trigger: CCCAATGTGCCAACTTCCCAACAGTCTATAGAGTAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS TCA 90 bp AGCATAGACTGCACACAAGTCTGGAACTGGGAGACTGACAGATTTTaGTTTTGCATCATAAACCTCATACATCTTCCATTGTACTTCTTT +
Preference number: 5 (lower is better)
Translates to: SIDCTQVWNWETDRF*FCIINLIHLPLYFF
Trigger: AAAGAAGTACAATGGAAGATGTATGAGGTTTATGATGCAAAATCAAAATCTGTCAGTCTCCCAGTTCCAGACTTGTGTGCAGTCTATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS-3UTR CAA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAAGTCATAGGTTGAATTaGGTGGCATGCAAGACAACT +
Preference number: 5 (lower is better)
Translates to: NYISQKMVSVGLISSWKQSHRLN*VACKTT
Trigger: AGTTGTCTTGCATGCCACCAAATTCAACCTATGACT...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTGTCTTTCCTTCAATGTaGTCTGCACATAAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFVFPSM*SAHKEQ
Trigger: CTGCTCCTTATGTGCAGACAACATTGAAGGAAAGAC...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGGTAGCTGAGACAATCTaGTCAGCTTCTCTGATAACT +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKVAETI*SASLIT
Trigger: AGTTATCAGAGAAGCTGACAAGATTGTCTCAGCTAC...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACATGGCATTCATGTTCATaGCAGCAGTACACTGCATCA +
Preference number: 5 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTWHSCS*QQYTAS
Trigger: TGATGCAGTGTACTGCTGCAATGAACATGAATGCCA...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGACTGGATTGTACTGGTaGACCATCTGCAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKTGLYW*TICKSF
Trigger: AAATGACTTGCAGATGGTCAACCAGTACAATCCAGT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTCCACTCTCTCTCTTTTaGATTGAGGTGACCCCTAAA +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFPLSLF*IEVTPK
Trigger: TTTAGGGGTCACCTCAATCAAAAAGAGAGAGAGTGG...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp AATTACATCTCACAAAAGATGGTGTCTGTTGGGCTTATTTCTAGCTGGAAACAAAGTACTGCACAGTGGTaGGTTTATGTAGACAGAATG +
Preference number: 5 (lower is better)
Translates to: NYISQKMVSVGLISSWKQSTAQW*VYVDRM
Trigger: CATTCTGTCTACATAAACCAACCACTGTGCAGTACT...TTGTTTCCAGCTAGAAATAAGCCCAACAGACACCATCTTTTGTGAGATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAAAGTATATGACATCTaGTGTGGTAAAGACACGAGG +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKKVYDI*CGKDTR
Trigger: CCTCGTGTCTTTACCACACAAGATGTCATATACTTT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTACTGGATTGTACTGGTaGACCATCTGCAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFTGLYW*TICKSF
Trigger: AAATGACTTGCAGATGGTCAACCAGTACAATCCAGT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGCTGAAAATTAAGTCCTaGTGCCCAGGAACAATTCTT +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKLKIKS*CPGTIL
Trigger: AAGAATTGTTCCTGGGCACAAGGACTTAATTTTCAG...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACATTCTTGAAGGTCTTCTaGCCACTGAACATCCAAATG +
Preference number: 5 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTFLKVF*PLNIQM
Trigger: CATTTGGATGTTCAGTGGCAAGAAGACCTTCAAGAA...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAGGATAACAGTAAAATaGGGAGTCTCTTGTCTCGGT +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFRITVK*GVSCLG
Trigger: ACCGAGACAAGAGACTCCCAATTTTACTGTTATCCT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACATGGGGTCTGGAATCTTaGTCATTGTTTAGAACTGCT +
Preference number: 5 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTWGLES*SLFRTA
Trigger: AGCAGTTCTAAACAATGACAAAGATTCCAGACCCCA...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CAGTATTTCATGGCAGGTAGTTTTCACAAGGTCCCAATAAAATGTAATGATACAAGACTGATTAGTAGCTaGTGTTTCGGTTTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: QYFMAGSFHKVPIKCNDTRLISS*CFGLRP
Trigger: AGGCCTTAAACCGAAACACAAGCTACTAATCAGTCT...TGTATCATTACATTTTATTGGGACCTTGTGAAAACTACCTGCCATGAAATACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAAAGTATATGACATCTaGTGTGGTAAAGACACGAGG +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFKVYDI*CGKDTR
Trigger: CCTCGTGTCTTTACCACACAAGATGTCATATACTTT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGAACTTTCCTCGAGGTTaGGTTTCATTCAGATTGAAA +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKNFPRG*VSFRLK
Trigger: TTTCAATCTGAATGAAACCAAACCTCGAGGAAAGTT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp CTGAAAGTAGAAAAGTTCTGTCCTCACCATGAACTATTCATAAAAGCTCCAAAGATAGCGAATCTGGAATaGAAGGTTATTCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LKVEKFCPHHELFIKAPKIANLE*KVILWK
Trigger: TTTCCAGAGAATAACCTTCAATTCCAGATTCGCTAT...CTTTGGAGCTTTTATGAATAGTTCATGGTGAGGACAGAACTTTTCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371060.7
ENST00000616738.4
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTCCTTTTCAAGATCTGTaGTTGAAAGTAGAGAGACCA +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFPFQDL*LKVERP
Trigger: TGGTCTCTCTACTTTCAACAACAGATCTTGAAAAGG...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTCTGAGTAGAACAAGTTaGGAATTGAGGCATGTAAGA +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFLSRTS*ELRHVR
Trigger: TCTTACATGCCTCAATTCCAAACTTGTTCTACTCAG...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTACATCAAGTAATGAGTaGCTATCAGCCCTTTACCTA +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFTSSNE*LSALYL
Trigger: TAGGTAAAGGGCTGATAGCAACTCATTACTTGATGT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTAACTTTCCTCGAGGTTaGGTTTCATTCAGATTGAAA +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFNFPRG*VSFRLK
Trigger: TTTCAATCTGAATGAAACCAAACCTCGAGGAAAGTT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS-3UTR CAA 90 bp GTTGTGACTAAAGAGAAAGTATTAACCACATGCCAAACACTTAATGACAGGTTTATAGCGAATCTGGAATaGAAGGTTATTCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: VVTKEKVLTTCQTLNDRFIANLE*KVILWK
Trigger: TTTCCAGAGAATAACCTTCAATTCCAGATTCGCTAT...AAACCTGTCATTAAGTGTTTGGCATGTGGTTAATACTTTCTCTTTAGTCACAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CCA 72 bp GCCGGGGCTCGGGCACCTGCGTCGCGCGCGCTCGGCTaGCCGTGGGCTCTGCGATGGGGCCGCTCCGAACTC +
Preference number: 6 (lower is better)
Translates to: AGARAPASRALG*PWALRWGRSEL
Trigger: GAGTTCGGAGCGGCCCCATCGCAGAGCCCACGGCCAGCCGAGCGCGCGCGACGCAGGTGCCCGAGCCCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344610.12
ENST00000462765.5
ENST00000616738.4
CDS CCA 72 bp GCTCGGGCACCTGCGTCGCGCGCGCTCGGCTGGCCGTaGGCTCTGCGATGGGGCCGCTCCGAACTCCTCGCC +
Preference number: 6 (lower is better)
Translates to: ARAPASRALGWP*ALRWGRSELLA
Trigger: GGCGAGGAGTTCGGAGCGGCCCCATCGCAGAGCCCACGGCCAGCCGAGCGCGCGCGACGCAGGTGCCCGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344610.12
ENST00000462765.5
ENST00000616738.4
CDS CCA 72 bp CTTGATCCGGGGGTCCAACTCGACCGAAGGCAGAGATaGCGGCGGCGCCGGGGCTCGGGCACCTGCGTCGCG +
Preference number: 6 (lower is better)
Translates to: LDPGVQLDRRQR*RRRRGSGTCVA
Trigger: CGCGACGCAGGTGCCCGAGCCCCGGCGCCGCCGCCATCTCTGCCTTCGGTCGAGTTGGACCCCCGGATCAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344610.12
ENST00000462765.5
ENST00000616738.4
CDS TCA 72 bp CAGATTCCTGGGCCATCCAGTCTCTTGCCCCTCACCTaGACCTCATACGAAGACCCAGGAAGTATACTGTCT +
Preference number: 6 (lower is better)
Translates to: QIPGPSSLLPLT*TSYEDPGSILS
Trigger: AGACAGTATACTTCCTGGGTCTTCGTATGAGGTTCAGGTGAGGGGCAAGAGACTGGATGGCCCAGGAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CCA 72 bp GGAGGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTaGTTTTCCTATGCAGAGGACCCTGTGGCCTTCCGC +
Preference number: 6 (lower is better)
Translates to: GGSADKQVNKGL*FSYAEDPVAFR
Trigger: GCGGAAGGCCACAGGGTCCTCTGCATAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371059.7
CDS CCA 72 bp TTGATCATTCTTGGGTGTTTCTCACAGAGGGGGATTTaGCAGGGTCATAGGACAATAGTGGAGGGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: LIILGCFSQRGI*QGHRTIVEGGS
Trigger: TGACCCTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATGATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371059.7
CDS CAA 90 bp ACTTGGTTTAGAGTTGCTGATCAGCGTGGCGTATTTAACAAAGGGTaGTCTCTGGCTTTCGTCCTCATAGGTTACCTCAGTACCCTCAGC +
Preference number: 6 (lower is better)
Translates to: TWFRVADQRGVFNKG*SLAFVLIGYLSTLS
Trigger: GCTGAGGGTACTGAGGTAACCTATGAGGACGAAAGCCAGAGACAACCCTTTGTTAAATACGCCACGCTGATCAGCAACTCTAAACCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS GCA 72 bp AGTAAAGGCTGCTCCTATGATACCTCAATTGCAAAGTaGTTTCCGCAAGTGACTGGATTGTACTGGTTGACC +
Preference number: 6 (lower is better)
Translates to: SKGCSYDTSIAK*FPQVTGLYWLT
Trigger: GGTCAACCAGTACAATCCAGTCACTTGCGGAAAGCACTTTGCAATTGAGGTATCATAGGAGCAGCCTTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CAA 72 bp CATGCTGCCTTCAAGCATCTTCTGAAAATTAAGTCCTaGTGCCCAGGAACAATTCTTGGGGTTCGGAACATC +
Preference number: 6 (lower is better)
Translates to: HAAFKHLLKIKS*CPGTILGVRNI
Trigger: GATGTTCCGAACCCCAAGAATTGTTCCTGGGCACAAGGACTTAATTTTCAGAAGATGCTTGAAGGCAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371059.7
CDS GCA 72 bp GCGATGATGGCATTCATGTTCATTGCAGCAGTACACTaGATCATAGGTAAACTTTCCTCGAGGTTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: AMMAFMFIAAVH*IIGKLSSRFGF
Trigger: GAAACCAAACCTCGAGGAAAGTTTACCTATGATGCAGTGTACTGCTGCAATGAACATGAATGCCATCATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CAA 72 bp CCAGATGTGATTTTCAAACACATAAGGAGAGTGTCGTaGAGTTTGGCTGTTGGCACAGGCACAAGACATTCA +
Preference number: 6 (lower is better)
Translates to: PDVIFKHIRRVS*SLAVGTGTRHS
Trigger: TGAATGTCTTGTGCCTGTGCCAACAGCCAAACTCAACGACACTCTCCTTATGTGTTTGAAAATCACATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CAA 90 bp CTTAACGAACATGCTGCCTTCAAGCATCTTCTGAAAATTAAGTCCTaGTGCCCAGGAACAATTCTTGGGGTTCGGAACATCTTCCCAAAA +
Preference number: 6 (lower is better)
Translates to: LNEHAAFKHLLKIKS*CPGTILGVRNIFPK
Trigger: TTTTGGGAAGATGTTCCGAACCCCAAGAATTGTTCCTGGGCACAAGGACTTAATTTTCAGAAGATGCTTGAAGGCAGCATGTTCGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371059.7
CDS TCA 72 bp CCTAATGGTGGATCAGGCTTCACCATATTTATGGGCTaGACTGACATTAGAGGTGACTGGAAAATTACTCCA +
Preference number: 6 (lower is better)
Translates to: PNGGSGFTIFMG*TDIRGDWKITP
Trigger: TGGAGTAATTTTCCAGTCACCTCTAATGTCAGTTCAGCCCATAAATATGGTGAAGCCTGATCCACCATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CAA 72 bp GTGATTTTCAAACACATAAGGAGAGTGTCGTTGAGTTaGGCTGTTGGCACAGGCACAAGACATTCACAACAT +
Preference number: 6 (lower is better)
Translates to: VIFKHIRRVSLS*AVGTGTRHSQH
Trigger: ATGTTGTGAATGTCTTGTGCCTGTGCCAACAGCCAAACTCAACGACACTCTCCTTATGTGTTTGAAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CAA 90 bp ATTACTCCACCAGATGTGATTTTCAAACACATAAGGAGAGTGTCGTaGAGTTTGGCTGTTGGCACAGGCACAAGACATTCACAACATTCA +
Preference number: 6 (lower is better)
Translates to: ITPPDVIFKHIRRVS*SLAVGTGTRHSQHS
Trigger: TGAATGTTGTGAATGTCTTGTGCCTGTGCCAACAGCCAAACTCAACGACACTCTCCTTATGTGTTTGAAAATCACATCTGGTGGAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CAA 90 bp CTATTTATAAGCCCTTGTTCTTCACCAGTTTCACTTGGTTTAGAGTaGCTGATCAGCGTGGCGTATTTAACAAAGGGTTGTCTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: LFISPCSSPVSLGLE*LISVAYLTKGCLWL
Trigger: AAGCCAGAGACAACCCTTTGTTAAATACGCCACGCTGATCAGCAACTCTAAACCAAGTGAAACTGGTGAAGAACAAGGGCTTATAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS TCA 72 bp TGTTTCAGGCTCCAAAAGAAGAGGACCACATGTCACTaGTGCTGTATGCTTGATAAAAAGATGCTCAAACGT +
Preference number: 6 (lower is better)
Translates to: CFRLQKKRTTCH*CCMLDKKMLKR
Trigger: ACGTTTGAGCATCTTTTTATCAAGCATACAGCATCAGTGACATGTGGTCCTCTTCTTTTGGAGCCTGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS GCA 72 bp TCCAAAAGAAGAGGACCACATGTCACTGATGCTGTATaGTTGATAAAAAGATGCTCAAACGTTTCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: SKRRGPHVTDAV*LIKRCSNVSGF
Trigger: GAAGCCAGAAACGTTTGAGCATCTTTTTATCAAGCATACAGCATCAGTGACATGTGGTCCTCTTCTTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CCA 72 bp CATAGGAACTTTTATATCCATGACAACTGTGTAGGCTaGATTGCTCCAATTACTCCAATATCCCAGTCCATC +
Preference number: 6 (lower is better)
Translates to: HRNFYIHDNCVG*IAPITPISQSI
Trigger: GATGGACTGGGATATTGGAGTAATTGGAGCAATCCAGCCTACACAGTTGTCATGGATATAAAAGTTCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CCA 72 bp GTACCCTCAGCCTCAGAGAAGTTAACACTGTTGAACTaGTCACTAATACAAACAGAACCCTTTTCAAGATCT +
Preference number: 6 (lower is better)
Translates to: VPSASEKLTLLN*SLIQTEPFSRS
Trigger: AGATCTTGAAAAGGGTTCTGTTTGTATTAGTGACCAGTTCAACAGTGTTAACTTCTCTGAGGCTGAGGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CCA 72 bp TTGATATTATTTTCTACAAAGTGTGAGCAACTGTCCTaGAGAACTCTGATGTCCGTGAATAAACAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: LILFSTKCEQLS*RTLMSVNKQGA
Trigger: AGCCCCCTGTTTATTCACGGACATCAGAGTTCTCCAGGACAGTTGCTCACACTTTGTAGAAAATAATATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CAA 90 bp CATGAAAAGGTTAAATTAAAATTTGCAACAGAAGCACCAATTGAATaGATGGCCAGAACCGTAACAGTATGTGCTTGCTCTGTCCACAGG +
Preference number: 6 (lower is better)
Translates to: HEKVKLKFATEAPIE*MARTVTVCACSVHR
Trigger: CCTGTGGACAGAGCAAGCACATACTGTTACGGTTCTGGCCATCAATTCAATTGGTGCTTCTGTTGCAAATTTTAATTTAACCTTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000616738.4
CDS TCA 72 bp CAGGAAAGTGAATTTCGTGTGATTTCCCACATCTTCTaGCCATGTTCCATTGCAGGAAGTATGATGGTTTAT +
Preference number: 6 (lower is better)
Translates to: QESEFRVISHIF*PCSIAGSMMVY
Trigger: ATAAACCATCATACTTCCTGCAATGGAACATGGTCAGAAGATGTGGGAAATCACACGAAATTCACTTTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000616738.4
CDS TCA 72 bp CCAATTTCAAAAGTTCATCCAATCCTTCTGAGAATGTaGGGTGTGGTGAAATTATGTTGGGATGCTGATCTG +
Preference number: 6 (lower is better)
Translates to: PISKVHPILLRM*GVVKLCWDADL
Trigger: CAGATCAGCATCCCAACATAATTTCACCACACCTCACATTCTCAGAAGGATTGGATGAACTTTTGAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CCA 72 bp ACTATTTATAAGCCCTTGTTCTTCACCAGTTTCACTTaGTTTAGAGTTGCTGATCAGCGTGGCGTATTTAAC +
Preference number: 6 (lower is better)
Translates to: TIYKPLFFTSFT*FRVADQRGVFN
Trigger: GTTAAATACGCCACGCTGATCAGCAACTCTAAACCAAGTGAAACTGGTGAAGAACAAGGGCTTATAAATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CAA 90 bp GTTCAACAGCTGTCTCATAATGTCCATTCGAATTTGAAGTATTCTTaGAGAGTCCAGCAGGCAAAAGGAAGTAGTCATAGGTTGAATTTG +
Preference number: 6 (lower is better)
Translates to: VQQLSHNVHSNLKYS*RVQQAKGSSHRLNL
Trigger: CAAATTCAACCTATGACTACTTCCTTTTGCCTGCTGGACTCTCAAAGAATACTTCAAATTCGAATGGACATTATGAGACAGCTGTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CAA 90 bp ATCTCCCATGAGCTATTAGAGAAAGAATCCTTCAACGGAGAATTTTaGCTAGAGAAGCACTTGGTGACTGAACTATTTATAAGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: ISHELLEKESFNGEF*LEKHLVTELFISPC
Trigger: ACAAGGGCTTATAAATAGTTCAGTCACCAAGTGCTTCTCTAGCAAAAATTCTCCGTTGAAGGATTCTTTCTCTAATAGCTCATGGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CCA 72 bp ATAGCAATCTTTGGGCTCAGATATGGGATGAATAGATaGAATATCAGAACAGTAAAGGCTGCTCCTATGATA +
Preference number: 6 (lower is better)
Translates to: IAIFGLRYGMNR*NIRTVKAAPMI
Trigger: TATCATAGGAGCAGCCTTTACTGTTCTGATATTCCATCTATTCATCCCATATCTGAGCCCAAAGATTGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4
CDS CAA 90 bp CAGAACCCTTTTCAAGATCTGTTGTTGAAAGTAGAGAGACCACAGTaGTTGGCATCATCTCATCTTTATTTTTCCATGATGTATCAACAC +
Preference number: 6 (lower is better)
Translates to: QNPFQDLLLKVERPQ*LASSHLYFSMMYQH
Trigger: GTGTTGATACATCATGGAAAAATAAAGATGAGATGATGCCAACAACTGTGGTCTCTCTACTTTCAACAACAGATCTTGAAAAGGGTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CAA 72 bp GTTAAATTAAAATTTGCAACAGAAGCACCAATTGAATaGATGGCCAGAACCGTAACAGTATGTGCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: VKLKFATEAPIE*MARTVTVCACS
Trigger: AGAGCAAGCACATACTGTTACGGTTCTGGCCATCAATTCAATTGGTGCTTCTGTTGCAAATTTTAATTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000616738.4
CDS CAA 72 bp CAAGATCTGTTGTTGAAAGTAGAGAGACCACAGTTGTaGGCATCATCTCATCTTTATTTTTCCATGATGTAT +
Preference number: 6 (lower is better)
Translates to: QDLLLKVERPQL*ASSHLYFSMMY
Trigger: ATACATCATGGAAAAATAAAGATGAGATGATGCCAACAACTGTGGTCTCTCTACTTTCAACAACAGATCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CAA 72 bp TTTCAAGATCTGTTGTTGAAAGTAGAGAGACCACAGTaGTTGGCATCATCTCATCTTTATTTTTCCATGATG +
Preference number: 6 (lower is better)
Translates to: FQDLLLKVERPQ*LASSHLYFSMM
Trigger: CATCATGGAAAAATAAAGATGAGATGATGCCAACAACTGTGGTCTCTCTACTTTCAACAACAGATCTTGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CAA 72 bp GAGCTATTAGAGAAAGAATCCTTCAACGGAGAATTTTaGCTAGAGAAGCACTTGGTGACTGAACTATTTATA +
Preference number: 6 (lower is better)
Translates to: ELLEKESFNGEF*LEKHLVTELFI
Trigger: TATAAATAGTTCAGTCACCAAGTGCTTCTCTAGCAAAAATTCTCCGTTGAAGGATTCTTTCTCTAATAGCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CAA 72 bp CATGATCTTATGAGTCTGAGTAGAACAAGTTTGGAATaGAGGCATGTAAGATGCAAAAGTCTTCTTACTAGA +
Preference number: 6 (lower is better)
Translates to: HDLMSLSRTSLE*RHVRCKSLLTR
Trigger: TCTAGTAAGAAGACTTTTGCATCTTACATGCCTCAATTCCAAACTTGTTCTACTCAGACTCATAAGATCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS CAA 72 bp GTTTTCCATGATCTTATGAGTCTGAGTAGAACAAGTTaGGAATTGAGGCATGTAAGATGCAAAAGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: VFHDLMSLSRTS*ELRHVRCKSLL
Trigger: AAGAAGACTTTTGCATCTTACATGCCTCAATTCCAAACTTGTTCTACTCAGACTCATAAGATCATGGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349533.11
CDS TCA 72 bp CAACAGTGGAAAGTTGTTTTGGATAAGTTAGAAAAGTaGGTACCACTTGAATTAAACTTAGGTTCAACAGCT +
Preference number: 6 (lower is better)
Translates to: QQWKVVLDKLEK*VPLELNLGSTA
Trigger: AGCTGTTGAACCTAAGTTTAATTCAAGTGGTACTCACTTTTCTAACTTATCCAAAACAACTTTCCACTGTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344610.12
ENST00000349533.11
ENST00000371058.1
ENST00000371059.7
ENST00000371060.7
ENST00000462765.5
ENST00000616738.4