RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LENG9 (Homo sapiens)

Ensembl gene IDs: ENSG00000275183

Ensembl transcript IDs: ENST00000611161.2, ENST00000614111.1, ENST00000622419.1, ENST00000622643.1

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTCCTGTGTGGGCTGTTTaGATCCATTGTCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFPVWAV*IHCLLQ
Trigger: CTGGAGGAGACAATGGATGCAAACAGCCCACACAGG...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
3UTR-3UTR GCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGCGTGCACGCTCCTaGTTTGTCTTTCCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYERARS*FVFPVW
Trigger: CCACACAGGAAAGACAAAGCAGGAGCGTGCACGCTC...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
3UTR-3UTR GCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATCCTGTGTGGGCTGTTTaGATCCATTGTCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYPVWAV*IHCLLQ
Trigger: CTGGAGGAGACAATGGATGCAAACAGCCCACACAGG...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
3UTR-3UTR GCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGAGAAAGAGAGAGCGTaGACGCTCCTGCTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFEKERA*TLLLCL
Trigger: AAGACAAAGCAGGAGCGTGCACGCTCTCTCTTTCTC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
3UTR-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGAGCGTGCACGCTCCTaGTTTGTCTTTCCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFERARS*FVFPVW
Trigger: CCACACAGGAAAGACAAAGCAGGAGCGTGCACGCTC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
3UTR-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTTTTGTCTTTCCTGTGTaGGCTGTTTGCATCCATTGT +
Preference number: 2 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFFVFPV*AVCIHC
Trigger: ACAATGGATGCAAACAGCCCACACAGGAAAGACAAA...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
3UTR-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCTGTGTGGGCTGTTTaGATCCATTGTCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFPVWAV*IHCLLQ
Trigger: CTGGAGGAGACAATGGATGCAAACAGCCCACACAGG...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
3UTR-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATTTTGTCTTTCCTGTGTaGGCTGTTTGCATCCATTGT +
Preference number: 2 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYFVFPV*AVCIHC
Trigger: ACAATGGATGCAAACAGCCCACACAGGAAAGACAAA...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
3UTR-3UTR CAA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGGCTGTTTGCATCCATaGTCTCCTCCAGAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFGCLHP*SPPEVW
Trigger: CCAGACCTCTGGAGGAGACAATGGATGCAAACAGCC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
3UTR GCA 72 bp CCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTaGTATGAGTTTGCAAACAGCTGGACTGTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: PSLPLLPCNWRM*YEFANSWTVRL
Trigger: CAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
3UTR CCA 72 bp AGAGAGCGTGCACGCTCCTGCTTTGTCTTTCCTGTGTaGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCT +
Preference number: 3 (lower is better)
Translates to: RERARSCFVFPV*AVCIHCLLQRS
Trigger: AGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCGTGCACGCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
3UTR-3UTR CAA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGGCTGTTTGCATCCATaGTCTCCTCCAGAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFGCLHP*SPPEVW
Trigger: CCAGACCTCTGGAGGAGACAATGGATGCAAACAGCC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGGGGACCACGCCGCGTaGCCTCGCGAGGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFGDHAA*PREDSG
Trigger: GCCAGAGTCCTCGCGAGGGCACGCGGCGTGGTCCCC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTCGGTGCGTCCAGGATaGTGGGCCCGCGTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGSVRPG*WARVPP
Trigger: CGGCGGGACGCGGGCCCACCATCCTGGACGCACCGA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTTCGGTGCGTCCAGGATaGTGGGCCCGCGTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFSVRPG*WARVPP
Trigger: CGGCGGGACGCGGGCCCACCATCCTGGACGCACCGA...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGGGGACCACGCCGCGTaGCCTCGCGAGGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQGDHAA*PREDSG
Trigger: GCCAGAGTCCTCGCGAGGGCACGCGGCGTGGTCCCC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCCACTCGGCACCCTCTaGCCCGTGGGCGCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQPLGTL*PVGALG
Trigger: ACCGAGGGCGCCCACGGGGCAGAGGGTGCCGAGTGG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTAGCCTCACCCGACAGTaGCGTCAGCGGCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGSLTRQ*RQRPAL
Trigger: GAGCGCGGGCCGCTGACGCCACTGTCGGGTGAGGCT...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTATGGGTGCGGGGAACTaGCACGCCCGCCGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGMGAGN*HARRAD
Trigger: GTCTGCGCGGCGGGCGTGCCAGTTCCCCGCACCCAT...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTAAGCGCACGCGGTGCTaGGGCACTGCCAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGKRTRC*GTASTP
Trigger: GGGCGTGCTGGCAGTGCCCCAGCACCGCGTGCGCTT...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGCACCCTCTGCCCCGTaGGCGCCCTCGGTGTTCGGT +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGAPSAP*APSVFG
Trigger: ACCGAACACCGAGGGCGCCCACGGGGCAGAGGGTGC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCCCAGCGCCCTCTCCTaGGCCGCCTCCAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQPSALS*AASSSP
Trigger: CGGAGAGCTGGAGGCGGCCCAGGAGAGGGCGCTGGG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTAGCGGATGCGCTGGATaGCGTCCGCGGCTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFSGCAG*RPRLCA
Trigger: TGCGCACAGCCGCGGACGTCATCCAGCGCATCCGCT...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGCAGCCTGGGCCTCCTaGCCTGTCCCCGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQAAWAS*PVPASV
Trigger: GACACTGGCGGGGACAGGTCAGGAGGCCCAGGCTGC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGCAGCCTGGGCCTCCTaGCCTGTCCCCGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYAAWAS*PVPASV
Trigger: GACACTGGCGGGGACAGGTCAGGAGGCCCAGGCTGC...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCGGCTCTCTGGCCGCTaGCATGGGTGCGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGRLSGR*HGCGEL
Trigger: CAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGCCCTCGGTGTTCGGTaGGTCCAGGATGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGALGVR*VQDGGP
Trigger: GGGCCCACCATCCTGGACGCACCGAACACCGAGGGC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGATGGGTGCGGGGAACTaGCACGCCCGCCGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQMGAGN*HARRAD
Trigger: GTCTGCGCGGCGGGCGTGCCAGTTCCCCGCACCCAT...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTCTCTGGCCGCTGCCATaGGTGCGGGGAACTGGCACG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFLWPLP*VRGTGT
Trigger: CGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAG...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGCAACTCCGGCTCTCTaGCCGCTGCCATGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFATPAL*PLPWVR
Trigger: CCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGCAACTCCGGCTCTCTaGCCGCTGCCATGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGATPAL*PLPWVR
Trigger: CCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTAGCGCCGCCAGCGGCTaGTCCCAGCAAAAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGSAASG*SQQKAL
Trigger: CAGCGCCTTTTGCTGGGACCAGCCGCTGGCGGCGCT...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTAGCGCCGCCAGCGGCTaGTCCCAGCAAAAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFSAASG*SQQKAL
Trigger: CAGCGCCTTTTGCTGGGACCAGCCGCTGGCGGCGCT...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGCACCCTCTGCCCCGTaGGCGCCCTCGGTGTTCGGT +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYAPSAP*APSVFG
Trigger: ACCGAACACCGAGGGCGCCCACGGGGCAGAGGGTGC...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGCACCCTCTGCCCCGTaGGCGCCCTCGGTGTTCGGT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQAPSAP*APSVFG
Trigger: ACCGAACACCGAGGGCGCCCACGGGGCAGAGGGTGC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCCCAGCGCCCTCTCCTaGGCCGCCTCCAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVPSALS*AASSSP
Trigger: CGGAGAGCTGGAGGCGGCCCAGGAGAGGGCGCTGGG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCGCAGCCTGGGCCTCCTaGCCTGTCCCCGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVAAWAS*PVPASV
Trigger: GACACTGGCGGGGACAGGTCAGGAGGCCCAGGCTGC...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGTGGCGGGGGCTTCCTaGGGCAACTCCGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYVAGAS*GNSGSL
Trigger: CAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCAC...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTAAGAAGCGCACGCGGTaGTGGGGCACTGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGKKRTR*WGTAST
Trigger: CGTGCTGGCAGTGCCCCAGCACCGCGTGCGCTTCTT...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCAAAGACGAGGTCGGTaGGCGAGGCGCGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGQRRGR*ARRGPT
Trigger: TGTGGGACCGCGCCTCGCGCACCGACCTCGTCTTTG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTCAAAGACGAGGTCGGTaGGCGAGGCGCGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFQRRGR*ARRGPT
Trigger: TGTGGGACCGCGCCTCGCGCACCGACCTCGTCTTTG...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGCCCTCGGTGTTCGGTaGGTCCAGGATGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQALGVR*VQDGGP
Trigger: GGGCCCACCATCCTGGACGCACCGAACACCGAGGGC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTGCAGAGCGGCCTTGTaGTCCCTCGCTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGCRAAL*SLAWGQ
Trigger: CTGCCCCCAAGCGAGGGAGCACAAGGCCGCTCTGCA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCCCTCGCGAGGACTCTaGCCCAGTCCCTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGPSRGL*PSPSLV
Trigger: CACCAAGGAGGGACTGGGCCAGAGTCCTCGCGAGGG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCTCTGGCCGCTGCCATaGGTGCGGGGAACTGGCACG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQLWPLP*VRGTGT
Trigger: CGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGCAACTCCGGCTCTCTaGCCGCTGCCATGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQATPAL*PLPWVR
Trigger: CCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTTCCCAGCGGATGCGCTaGATGACGTCCGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFSQRMR*MTSAAV
Trigger: CACAGCCGCGGACGTCATCCAGCGCATCCGCTGGGA...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTTCCACGCCTGGTTCCTaGTGCCCTGTGCAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFSTPGS*CPVQSG
Trigger: GCCGCTCTGCACAGGGCACCAGGAACCAGGCGTGGA...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTCCACGCCTGGTTCCTaGTGCCCTGTGCAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGSTPGS*CPVQSG
Trigger: GCCGCTCTGCACAGGGCACCAGGAACCAGGCGTGGA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCAGCGGATGCGCTGGATaGCGTCCGCGGCTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVSGCAG*RPRLCA
Trigger: TGCGCACAGCCGCGGACGTCATCCAGCGCATCCGCT...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATCCCAGCAAAAGGCGCTaGAGGGCTCCTCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYPSKRR*RAPRAH
Trigger: GTGTGCGCGAGGAGCCCTTCAGCGCCTTTTGCTGGG...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCGGCTCTCTGGCCGCTaGCATGGGTGCGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVRLSGR*HGCGEL
Trigger: CAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCGTGGCGGGGGCTTCCTaGGGCAACTCCGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVVAGAS*GNSGSL
Trigger: CAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCAC...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCAAAGACGAGGTCGGTaGGCGAGGCGCGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQQRRGR*ARRGPT
Trigger: TGTGGGACCGCGCCTCGCGCACCGACCTCGTCTTTG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCGCCCTCGGTGTTCGGTaGGTCCAGGATGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVALGVR*VQDGGP
Trigger: GGGCCCACCATCCTGGACGCACCGAACACCGAGGGC...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTGCAGAGCGGCCTTGTaGTCCCTCGCTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQCRAAL*SLAWGQ
Trigger: CTGCCCCCAAGCGAGGGAGCACAAGGCCGCTCTGCA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGTTCCTGGTGCCCTGTaGAGAGCGGCCTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGVPGAL*RAALCS
Trigger: GGAGCACAAGGCCGCTCTGCACAGGGCACCAGGAAC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGTTCCTGGTGCCCTGTaGAGAGCGGCCTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFVPGAL*RAALCS
Trigger: GGAGCACAAGGCCGCTCTGCACAGGGCACCAGGAAC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTACGCCTGGTTCCTGGTaGCCTGTGCAGAGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGTPGSW*PVQSGL
Trigger: AAGGCCGCTCTGCACAGGGCACCAGGAACCAGGCGT...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGGGCCTGTGCTTCCTTaGCCCCCAGCAATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFGPVLP*PPAMWS
Trigger: GGACCACATTGCTGGGGGGCAAGGAAGCACAGGCCC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGGGCCTGTGCTTCCTTaGCCCCCAGCAATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGGPVLP*PPAMWS
Trigger: GGACCACATTGCTGGGGGGCAAGGAAGCACAGGCCC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCGGTTGGCAAGGGGCTaGAACACTAAGGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGRLARG*NTKAGP
Trigger: AGGGCCCGCCTTAGTGTTGCAGCCCCTTGCCAACCG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCTGACACCGCTGCTCTaGGACTTCCCGGCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVLTPLL*DFPAAP
Trigger: GGGCGCAGCCGGGAAGTCCCAGAGCAGCGGTGTCAG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611161.2
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCCCTCGCGAGGACTCTaGCCCAGTCCCTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQPSRGL*PSPSLV
Trigger: CACCAAGGAGGGACTGGGCCAGAGTCCTCGCGAGGG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCTCTGGCCGCTGCCATaGGTGCGGGGAACTGGCACG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVLWPLP*VRGTGT
Trigger: CGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATTCCCAGCGGATGCGCTaGATGACGTCCGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYSQRMR*MTSAAV
Trigger: CACAGCCGCGGACGTCATCCAGCGCATCCGCTGGGA...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTCCCAGCGGATGCGCTaGATGACGTCCGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQSQRMR*MTSAAV
Trigger: CACAGCCGCGGACGTCATCCAGCGCATCCGCTGGGA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTCCACGCCTGGTTCCTaGTGCCCTGTGCAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQSTPGS*CPVQSG
Trigger: GCCGCTCTGCACAGGGCACCAGGAACCAGGCGTGGA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCAGTGTGGGGCCACGTaGACCAGGTATTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGQCGAT*TRYSWA
Trigger: GGCCCAGGAATACCTGGTCCACGTGGCCCCACACTG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTCAGTGTGGGGCCACGTaGACCAGGTATTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFQCGAT*TRYSWA
Trigger: GGCCCAGGAATACCTGGTCCACGTGGCCCCACACTG...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGTCTCAGAGCTCCAATaGCAGCGGCCTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFVSELQ*QRPPPQ
Trigger: CTGGGGAGGAGGCCGCTGCCATTGGAGCTCTGAGAC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTCAGTGTGGGAGAGGGTaGGGCACACAGCACATGCGG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFQCGRG*GTQHMR
Trigger: CCGCATGTGCTGTGTGCCCCACCCTCTCCCACACTG...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTGGACCTGGGAACCATaGGGCACCTTGGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGWTWEP*GTLATV
Trigger: CACCGTGGCCAAGGTGCCCCATGGTTCCCAGGTCCA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTTGGACCTGGGAACCATaGGGCACCTTGGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFWTWEP*GTLATV
Trigger: CACCGTGGCCAAGGTGCCCCATGGTTCCCAGGTCCA...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTCCAGCTTGGGGAGGTaGACCTGGGAACCATGGGGC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGSSLGR*TWEPWG
Trigger: GCCCCATGGTTCCCAGGTCCACCTCCCCAAGCTGGA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTAGTGTCTGCAGGGGCTaGCACCCCACTTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFSVCRG*HPTSWL
Trigger: CAGCCAGGAAGTGGGGTGCCAGCCCCTGCAGACACT...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCCCAGCAAAAGGCGCTaGAGGGCTCCTCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVPSKRR*RAPRAH
Trigger: GTGTGCGCGAGGAGCCCTTCAGCGCCTTTTGCTGGG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGGGGACCACGCCGCGTaGCCTCGCGAGGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFGDHAA*PREDSG
Trigger: GCCAGAGTCCTCGCGAGGGCACGCGGCGTGGTCCCC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCAAGAAGCGCACGCGGTaGTGGGGCACTGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVKKRTR*WGTAST
Trigger: CGTGCTGGCAGTGCCCCAGCACCGCGTGCGCTTCTT...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCACTCGGCACCCTCTaGCCCGTGGGCGCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFPLGTL*PVGALG
Trigger: ACCGAGGGCGCCCACGGGGCAGAGGGTGCCGAGTGG...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGCAGAGCGGCCTTGTaGTCCCTCGCTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVCRAAL*SLAWGQ
Trigger: CTGCCCCCAAGCGAGGGAGCACAAGGCCGCTCTGCA...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGTTCCTGGTGCCCTGTaGAGAGCGGCCTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYVPGAL*RAALCS
Trigger: GGAGCACAAGGCCGCTCTGCACAGGGCACCAGGAAC...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCCAAATCAGCAGCTGTaGCCAGCGCCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQPNQQL*PAPSPG
Trigger: CCCAGGAGAGGGCGCTGGGCACAGCTGCTGATTTGG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCGGTTGGCAAGGGGCTaGAACACTAAGGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQRLARG*NTKAGP
Trigger: AGGGCCCGCCTTAGTGTTGCAGCCCCTTGCCAACCG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCACAGCCAGAGTGTCTaGAGGGGCTGGCACCCCACT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQHSQSV*RGWHPT
Trigger: AGTGGGGTGCCAGCCCCTGCAGACACTCTGGCTGTG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTTCGGTGCGTCCAGGATaGTGGGCCCGCGTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFSVRPG*WARVPP
Trigger: CGGCGGGACGCGGGCCCACCATCCTGGACGCACCGA...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTCCACGCCTGGTTCCTaGTGCCCTGTGCAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVSTPGS*CPVQSG
Trigger: GCCGCTCTGCACAGGGCACCAGGAACCAGGCGTGGA...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGGCGAGGCGTCCTCTTaGGGCCAGTGTTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFGEASS*GQCSQI
Trigger: GATTTGGGAACACTGGCCCCAAGAGGACGCCTCGCC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGGCGAGGCGTCCTCTTaGGGCCAGTGTTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGGEASS*GQCSQI
Trigger: GATTTGGGAACACTGGCCCCAAGAGGACGCCTCGCC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTTGTGTGGGGCGCGGTTaGCAAGGGGCTGCAACACTA +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFCVGRG*QGAATL
Trigger: TAGTGTTGCAGCCCCTTGCCAACCGCGCCCCACACA...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGGGCCACAAAATGTGTaGGGCGCGGTTGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYGPQNV*GAVGKG
Trigger: CCCCTTGCCAACCGCGCCCCACACATTTTGTGGCCC...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGGGCCACAAAATGTGTaGGGCGCGGTTGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQGPQNV*GAVGKG
Trigger: CCCCTTGCCAACCGCGCCCCACACATTTTGTGGCCC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATCAGTGTGGGGCCACGTaGACCAGGTATTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYQCGAT*TRYSWA
Trigger: GGCCCAGGAATACCTGGTCCACGTGGCCCCACACTG...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGAAGTTGGCGCAGTGTaGGGCCACGTGGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGEVGAV*GHVDQV
Trigger: TACCTGGTCCACGTGGCCCCACACTGCGCCAACTTC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGTCTCAGAGCTCCAATaGCAGCGGCCTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQVSELQ*QRPPPQ
Trigger: CTGGGGAGGAGGCCGCTGCCATTGGAGCTCTGAGAC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTGGACCTGGGAACCATaGGGCACCTTGGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQWTWEP*GTLATV
Trigger: CACCGTGGCCAAGGTGCCCCATGGTTCCCAGGTCCA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTTGGGGAGGTGGACCTaGGAACCATGGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGLGRWT*EPWGTL
Trigger: CAAGGTGCCCCATGGTTCCCAGGTCCACCTCCCCAA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTCCAGCTTGGGGAGGTaGACCTGGGAACCATGGGGC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQSSLGR*TWEPWG
Trigger: GCCCCATGGTTCCCAGGTCCACCTCCCCAAGCTGGA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGTGTCTGCAGGGGCTaGCACCCCACTTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQSVCRG*HPTSWL
Trigger: CAGCCAGGAAGTGGGGTGCCAGCCCCTGCAGACACT...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCCTTGGTGGAGAGCCTaGCACCGCTGCTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVPWWRA*HRCSGT
Trigger: AGTCCCAGAGCAGCGGTGTCAGGCTCTCCACCAAGG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611161.2
CDS-3UTR TCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGCAGCCTGGGCCTCCTaGCCTGTCCCCGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFAAWAS*PVPASV
Trigger: GACACTGGCGGGGACAGGTCAGGAGGCCCAGGCTGC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCAGGCTCGGTCACCATaGGGGCCACAAAATGTGTGG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGQARSP*GPQNVW
Trigger: CCACACATTTTGTGGCCCTCATGGTGACCGAGCCTG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCACGCCTGGTTCCTGGTaGCCTGTGCAGAGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVTPGSW*PVQSGL
Trigger: AAGGCCGCTCTGCACAGGGCACCAGGAACCAGGCGT...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTGTGGTCCTGGTGGCTaGTGTTGGCTTCAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGCGPGG*CWLQCL
Trigger: GAGGCACTGAAGCCAACAGCAGCCACCAGGACCACA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTTGTGGTCCTGGTGGCTaGTGTTGGCTTCAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFCGPGG*CWLQCL
Trigger: GAGGCACTGAAGCCAACAGCAGCCACCAGGACCACA...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCGGGCCTGTGCTTCCTTaGCCCCCAGCAATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVGPVLP*PPAMWS
Trigger: GGACCACATTGCTGGGGGGCAAGGAAGCACAGGCCC...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCGGTTGGCAAGGGGCTaGAACACTAAGGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVRLARG*NTKAGP
Trigger: AGGGCCCGCCTTAGTGTTGCAGCCCCTTGCCAACCG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTAGGTGGGGGTGCAGCTaGCCTGGAGACTGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGRWGCS*PGDCSV
Trigger: TACACTACAGTCTCCAGGGCAGCTGCACCCCCACCT...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTAGGTGGGGGTGCAGCTaGCCTGGAGACTGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFRWGCS*PGDCSV
Trigger: TACACTACAGTCTCCAGGGCAGCTGCACCCCCACCT...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTAGCCTCACCCGACAGTaGCGTCAGCGGCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFSLTRQ*RQRPAL
Trigger: GAGCGCGGGCCGCTGACGCCACTGTCGGGTGAGGCT...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTATGGGTGCGGGGAACTaGCACGCCCGCCGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFMGAGN*HARRAD
Trigger: GTCTGCGCGGCGGGCGTGCCAGTTCCCCGCACCCAT...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTAAGCGCACGCGGTGCTaGGGCACTGCCAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFKRTRC*GTASTP
Trigger: GGGCGTGCTGGCAGTGCCCCAGCACCGCGTGCGCTT...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTGTGTGGGGCGCGGTTaGCAAGGGGCTGCAACACTA +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQCVGRG*QGAATL
Trigger: TAGTGTTGCAGCCCCTTGCCAACCGCGCCCCACACA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATTGTGTGGGGCGCGGTTaGCAAGGGGCTGCAACACTA +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYCVGRG*QGAATL
Trigger: TAGTGTTGCAGCCCCTTGCCAACCGCGCCCCACACA...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCAGTGTGGGGCCACGTaGACCAGGTATTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVQCGAT*TRYSWA
Trigger: GGCCCAGGAATACCTGGTCCACGTGGCCCCACACTG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAAGTTGGCGCAGTGTaGGGCCACGTGGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYEVGAV*GHVDQV
Trigger: TACCTGGTCCACGTGGCCCCACACTGCGCCAACTTC...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGAAGTTGGCGCAGTGTaGGGCCACGTGGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQEVGAV*GHVDQV
Trigger: TACCTGGTCCACGTGGCCCCACACTGCGCCAACTTC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGGCACTAGGAAGTTaGCGCAGTGTGGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQRALGS*RSVGPR
Trigger: ACGTGGCCCCACACTGCGCCAACTTCCTAGTGCCCT...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCGTCTCAGAGCTCCAATaGCAGCGGCCTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVVSELQ*QRPPPQ
Trigger: CTGGGGAGGAGGCCGCTGCCATTGGAGCTCTGAGAC...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCAGTGTGGGAGAGGGTaGGGCACACAGCACATGCGG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVQCGRG*GTQHMR
Trigger: CCGCATGTGCTGTGTGCCCCACCCTCTCCCACACTG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTCCATGCTTTCCAGTGTaGGAGAGGGTGGGGCACACA +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFPCFPV*ERVGHT
Trigger: TGTGTGCCCCACCCTCTCCCACACTGGAAAGCATGG...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCCATGCTTTCCAGTGTaGGAGAGGGTGGGGCACACA +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGPCFPV*ERVGHT
Trigger: TGTGTGCCCCACCCTCTCCCACACTGGAAAGCATGG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTTCGGCTTCCAGCCTCTaGCTCAGCACTTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFSASSL*LSTCAM
Trigger: CATGGCACAAGTGCTGAGCCAGAGGCTGGAAGCCGA...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTGGCACCCCACTTCCTaGCTGAGGGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQWHPTS*LRVNSS
Trigger: GCTGGAGTTCACCCTCAGCCAGGAAGTGGGGTGCCA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATTGGCACCCCACTTCCTaGCTGAGGGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYWHPTS*LRVNSS
Trigger: GCTGGAGTTCACCCTCAGCCAGGAAGTGGGGTGCCA...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCAGGCTCGGTCACCATaGGGGCCACAAAATGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQQARSP*GPQNVW
Trigger: CCACACATTTTGTGGCCCTCATGGTGACCGAGCCTG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGTGGCGGGGGCTTCCTaGGGCAACTCCGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFVAGAS*GNSGSL
Trigger: CAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCAC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATTGTGGTCCTGGTGGCTaGTGTTGGCTTCAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYCGPGG*CWLQCL
Trigger: GAGGCACTGAAGCCAACAGCAGCCACCAGGACCACA...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCTGGCTCAGCACTTGTaGCATGCTTTCCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGLAQHL*HAFQCG
Trigger: CCCACACTGGAAAGCATGGCACAAGTGCTGAGCCAG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTGGGGGTGCAGCTaGCCTGGAGACTGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQRWGCS*PGDCSV
Trigger: TACACTACAGTCTCCAGGGCAGCTGCACCCCCACCT...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGAGCGTGCACGCTCCTaGTTTGTCTTTCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGERARS*FVFPVW
Trigger: CCACACAGGAAAGACAAAGCAGGAGCGTGCACGCTC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCTCTGGCCGCTGCCATaGGTGCGGGGAACTGGCACG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFLWPLP*VRGTGT
Trigger: CGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAG...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGTGTGGGGCGCGGTTaGCAAGGGGCTGCAACACTA +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVCVGRG*QGAATL
Trigger: TAGTGTTGCAGCCCCTTGCCAACCGCGCCCCACACA...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCAGGGCACTAGGAAGTTaGCGCAGTGTGGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVRALGS*RSVGPR
Trigger: ACGTGGCCCCACACTGCGCCAACTTCCTAGTGCCCT...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCCATGCTTTCCAGTGTaGGAGAGGGTGGGGCACACA +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQPCFPV*ERVGHT
Trigger: TGTGTGCCCCACCCTCTCCCACACTGGAAAGCATGG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATTCGGCTTCCAGCCTCTaGCTCAGCACTTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYSASSL*LSTCAM
Trigger: CATGGCACAAGTGCTGAGCCAGAGGCTGGAAGCCGA...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTCGGCTTCCAGCCTCTaGCTCAGCACTTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQSASSL*LSTCAM
Trigger: CATGGCACAAGTGCTGAGCCAGAGGCTGGAAGCCGA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTTGGGGAGGTGGACCTaGGAACCATGGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVLGRWT*EPWGTL
Trigger: CAAGGTGCCCCATGGTTCCCAGGTCCACCTCCCCAA...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGCACCCCACTTCCTaGCTGAGGGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVWHPTS*LRVNSS
Trigger: GCTGGAGTTCACCCTCAGCCAGGAAGTGGGGTGCCA...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCAGGCTCGGTCACCATaGGGGCCACAAAATGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVQARSP*GPQNVW
Trigger: CCACACATTTTGTGGCCCTCATGGTGACCGAGCCTG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGTCAGGTGTAGGTTCTaGGAGGGCACTAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGVRCRF*EGTRKL
Trigger: CAACTTCCTAGTGCCCTCTCAGAACCTACACCTGAC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGTCAGGTGTAGGTTCTaGGAGGGCACTAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFVRCRF*EGTRKL
Trigger: CAACTTCCTAGTGCCCTCTCAGAACCTACACCTGAC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTCAGCACTTGTGCCATaGTTTCCAGTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGSALVP*FPVWER
Trigger: CCTCTCCCACACTGGAAAGCATGGCACAAGTGCTGA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCTGGCTCAGCACTTGTaGCATGCTTTCCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQLAQHL*HAFQCG
Trigger: CCCACACTGGAAAGCATGGCACAAGTGCTGAGCCAG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCCTGTGTGGGCTGTTTaGATCCATTGTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGPVWAV*IHCLLQ
Trigger: CTGGAGGAGACAATGGATGCAAACAGCCCACACAGG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGAGCGTGCACGCTCCTaGTTTGTCTTTCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQERARS*FVFPVW
Trigger: CCACACAGGAAAGACAAAGCAGGAGCGTGCACGCTC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTTCCCAGCGGATGCGCTaGATGACGTCCGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFSQRMR*MTSAAV
Trigger: CACAGCCGCGGACGTCATCCAGCGCATCCGCTGGGA...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGGTATTCCTGGGCCTTaGTCACTTCTGCTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFGIPGP*SLLLVA
Trigger: GGCTACAAGCAGAAGTGACCAAGGCCCAGGAATACC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTTGGACCAGGTATTCCTaGGCCTTGGTCACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFWTRYS*ALVTSA
Trigger: AGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCA...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTGGACCAGGTATTCCTaGGCCTTGGTCACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGWTRYS*ALVTSA
Trigger: AGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTCTGGAGGATGTGCTATaGGTTTGCAAACAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFLEDVL*VCKQLD
Trigger: GTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAG...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCTGGAGGATGTGCTATaGGTTTGCAAACAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGLEDVL*VCKQLD
Trigger: GTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCAAATCAGCAGCTGTaGCCAGCGCCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFPNQQL*PAPSPG
Trigger: CCCAGGAGAGGGCGCTGGGCACAGCTGCTGATTTGG...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATTCAGCACTTGTGCCATaGTTTCCAGTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYSALVP*FPVWER
Trigger: CCTCTCCCACACTGGAAAGCATGGCACAAGTGCTGA...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCACAGCCAGAGTGTCTaGAGGGGCTGGCACCCCACT +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFHSQSV*RGWHPT
Trigger: AGTGGGGTGCCAGCCCCTGCAGACACTCTGGCTGTG...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGAGAAAGAGAGAGCGTaGACGCTCCTGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGEKERA*TLLLCL
Trigger: AAGACAAAGCAGGAGCGTGCACGCTCTCTCTTTCTC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCCTCCCTCCCTCTTCTaGCATGTAACTGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQPPSLF*HVTGGC
Trigger: ACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATCCTCCCTCCCTCTTCTaGCATGTAACTGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYPPSLF*HVTGGC
Trigger: ACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGG...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGGGCCACAAAATGTGTaGGGCGCGGTTGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFGPQNV*GAVGKG
Trigger: CCCCTTGCCAACCGCGCCCCACACATTTTGTGGCCC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGGTATTCCTGGGCCTTaGTCACTTCTGCTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQGIPGP*SLLLVA
Trigger: GGCTACAAGCAGAAGTGACCAAGGCCCAGGAATACC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTGGACCAGGTATTCCTaGGCCTTGGTCACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQWTRYS*ALVTSA
Trigger: AGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGTCTCAGAGCTCCAATaGCAGCGGCCTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFVSELQ*QRPPPQ
Trigger: CTGGGGAGGAGGCCGCTGCCATTGGAGCTCTGAGAC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCAGTGTGGGAGAGGGTaGGGCACACAGCACATGCGG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFQCGRG*GTQHMR
Trigger: CCGCATGTGCTGTGTGCCCCACCCTCTCCCACACTG...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTTGGACCTGGGAACCATaGGGCACCTTGGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFWTWEP*GTLATV
Trigger: CACCGTGGCCAAGGTGCCCCATGGTTCCCAGGTCCA...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTTCCAGCTTGGGGAGGTaGACCTGGGAACCATGGGGC +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFSSLGR*TWEPWG
Trigger: GCCCCATGGTTCCCAGGTCCACCTCCCCAAGCTGGA...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCGTCAGGTGTAGGTTCTaGGAGGGCACTAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVVRCRF*EGTRKL
Trigger: CAACTTCCTAGTGCCCTCTCAGAACCTACACCTGAC...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATCTGGAGGATGTGCTATaGGTTTGCAAACAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYLEDVL*VCKQLD
Trigger: GTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAG...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR TCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCTGGAGGATGTGCTATaGGTTTGCAAACAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQLEDVL*VCKQLD
Trigger: GTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCCCTGTGTGGGCTGTTTaGATCCATTGTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVPVWAV*IHCLLQ
Trigger: CTGGAGGAGACAATGGATGCAAACAGCCCACACAGG...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGAGAAAGAGAGAGCGTaGACGCTCCTGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQEKERA*TLLLCL
Trigger: AAGACAAAGCAGGAGCGTGCACGCTCTCTCTTTCTC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGAAAGAGAGAGCGTaGACGCTCCTGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYEKERA*TLLLCL
Trigger: AAGACAAAGCAGGAGCGTGCACGCTCTCTCTTTCTC...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGGCGAGGCGTCCTCTTaGGGCCAGTGTTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFGEASS*GQCSQI
Trigger: GATTTGGGAACACTGGCCCCAAGAGGACGCCTCGCC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGACCAGGTATTCCTaGGCCTTGGTCACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVWTRYS*ALVTSA
Trigger: AGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCA...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGAAGTTGGCGCAGTGTaGGGCCACGTGGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFEVGAV*GHVDQV
Trigger: TACCTGGTCCACGTGGCCCCACACTGCGCCAACTTC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTTTGGGGAGGTGGACCTaGGAACCATGGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFLGRWT*EPWGTL
Trigger: CAAGGTGCCCCATGGTTCCCAGGTCCACCTCCCCAA...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTTGGCACCCCACTTCCTaGCTGAGGGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFWHPTS*LRVNSS
Trigger: GCTGGAGTTCACCCTCAGCCAGGAAGTGGGGTGCCA...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTTGTGGTCCTGGTGGCTaGTGTTGGCTTCAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFCGPGG*CWLQCL
Trigger: GAGGCACTGAAGCCAACAGCAGCCACCAGGACCACA...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTAGGTGGGGGTGCAGCTaGCCTGGAGACTGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFRWGCS*PGDCSV
Trigger: TACACTACAGTCTCCAGGGCAGCTGCACCCCCACCT...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCATGCTTTCCAGTGTaGGAGAGGGTGGGGCACACA +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFPCFPV*ERVGHT
Trigger: TGTGTGCCCCACCCTCTCCCACACTGGAAAGCATGG...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTTCGGCTTCCAGCCTCTaGCTCAGCACTTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFSASSL*LSTCAM
Trigger: CATGGCACAAGTGCTGAGCCAGAGGCTGGAAGCCGA...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGAGTTTGCAAACAGCTaGACTGTCAGGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGEFANS*TVRLLF
Trigger: AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCTGGCTCAGCACTTGTaGCATGCTTTCCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFLAQHL*HAFQCG
Trigger: CCCACACTGGAAAGCATGGCACAAGTGCTGAGCCAG...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTGTAACTGGAGGATGTaGTATGAGTTTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGCNWRM*YEFANS
Trigger: GCTGTTTGCAAACTCATAGCACATCCTCCAGTTACA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTTTTGTCTTTCCTGTGTaGGCTGTTTGCATCCATTGT +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGFVFPV*AVCIHC
Trigger: ACAATGGATGCAAACAGCCCACACAGGAAAGACAAA...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGAGTTTGCAAACAGCTaGACTGTCAGGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQEFANS*TVRLLF
Trigger: AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCTTCTGCCATGTAACTaGAGGATGTGCTATGAGTTT +
Preference number: 4 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGLLPCN*RMCYEF
Trigger: AAACTCATAGCACATCCTCCAGTTACATGGCAGAAG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR TCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGTCAGGTGTAGGTTCTaGGAGGGCACTAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFVRCRF*EGTRKL
Trigger: CAACTTCCTAGTGCCCTCTCAGAACCTACACCTGAC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTTCAGCACTTGTGCCATaGTTTCCAGTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFSALVP*FPVWER
Trigger: CCTCTCCCACACTGGAAAGCATGGCACAAGTGCTGA...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGTGTAACTGGAGGATGTaGTATGAGTTTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQCNWRM*YEFANS
Trigger: GCTGTTTGCAAACTCATAGCACATCCTCCAGTTACA...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCTCCCTCCCTCTTCTaGCATGTAACTGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFPPSLF*HVTGGC
Trigger: ACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGG...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCGAGTTTGCAAACAGCTaGACTGTCAGGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVEFANS*TVRLLF
Trigger: AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTC...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATCTTCTGCCATGTAACTaGAGGATGTGCTATGAGTTT +
Preference number: 4 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYLLPCN*RMCYEF
Trigger: AAACTCATAGCACATCCTCCAGTTACATGGCAGAAG...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCTTCTGCCATGTAACTaGAGGATGTGCTATGAGTTT +
Preference number: 4 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQLLPCN*RMCYEF
Trigger: AAACTCATAGCACATCCTCCAGTTACATGGCAGAAG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGAGAAAGAGAGAGCGTaGACGCTCCTGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFEKERA*TLLLCL
Trigger: AAGACAAAGCAGGAGCGTGCACGCTCTCTCTTTCTC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR GCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGTAACTGGAGGATGTaGTATGAGTTTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVCNWRM*YEFANS
Trigger: GCTGTTTGCAAACTCATAGCACATCCTCCAGTTACA...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CCA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTTTGTCTTTCCTGTGTaGGCTGTTTGCATCCATTGT +
Preference number: 4 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVFVFPV*AVCIHC
Trigger: ACAATGGATGCAAACAGCCCACACAGGAAAGACAAA...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp TGCGGCAACTCCGGCTCTCTGGCCGCTGCCATGGGTGCGGGGAACTaGCACGCCCGCCGCGCAGACGAGGTCGCCCCGCACGGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: CGNSGSLAAAMGAGN*HARRADEVAPHGGR
Trigger: CCGCCCTCCGTGCGGGGCGACCTCGTCTGCGCGGCGGGCGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGCCGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp GCGCGGGTTCCGTGGCGGGGGCTTCCTGCGGCAACTCCGGCTCTCTaGCCGCTGCCATGGGTGCGGGGAACTGGCACGCCCGCCGCGCAG +
Preference number: 5 (lower is better)
Translates to: ARVPWRGLPAATPAL*PLPWVRGTGTPAAQ
Trigger: CTGCGCGGCGGGCGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCACGGAACCCGCGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp TGGCGGGGGCTTCCTGCGGCAACTCCGGCTCTCTGGCCGCTGCCATaGGTGCGGGGAACTGGCACGCCCGCCGCGCAGACGAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: WRGLPAATPALWPLP*VRGTGTPAAQTRSP
Trigger: GGGCGACCTCGTCTGCGCGGCGGGCGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp GGCCTTCCAGGAAGAAGCGGCAGGCCGGCGGGGGCGCGGGTTCCGTaGCGGGGGCTTCCTGCGGCAACTCCGGCTCTCTGGCCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GLPGRSGRPAGARVP*RGLPAATPALWPLP
Trigger: TGGCAGCGGCCAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCACGGAACCCGCGCCCCCGCCGGCCTGCCGCTTCTTCCTGGAAGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS TCA 90 bp AGAAGTCGGCGGGGTCGAGGCGCGGGTCCCAGCGGATGCGCTGGATaGCGTCCGCGGCTGTGCGCAGCGGCGGCTTCTTGGCCCCGGCCT +
Preference number: 5 (lower is better)
Translates to: RSRRGRGAGPSGCAG*RPRLCAAAASWPRP
Trigger: AGGCCGGGGCCAAGAAGCCGCCGCTGCGCACAGCCGCGGACGTCATCCAGCGCATCCGCTGGGACCCGCGCCTCGACCCCGCCGACTTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 90 bp CGTCAGCGGCCCGCGCTCCGGCCTAGCTCTGGGGACCACGCCGCGTaGCCTCGCGAGGACTCTGGCCCAGTCCCTCCTTGGTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: RQRPALRPSSGDHAA*PREDSGPVPPWWRA
Trigger: GGCTCTCCACCAAGGAGGGACTGGGCCAGAGTCCTCGCGAGGGCACGCGGCGTGGTCCCCAGAGCTAGGCCGGAGCGCGGGCCGCTGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp ACCGAGAAGTCGGCGGGGTCGAGGCGCGGGTCCCAGCGGATGCGCTaGATGACGTCCGCGGCTGTGCGCAGCGGCGGCTTCTTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: TEKSAGSRRGSQRMR*MTSAAVRSGGFLAP
Trigger: CGGGGCCAAGAAGCCGCCGCTGCGCACAGCCGCGGACGTCATCCAGCGCATCCGCTGGGACCCGCGCCTCGACCCCGCCGACTTCTCGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp CCTCTGCCCCGTGGGCGCCCTCGGTGTTCGGTGCGTCCAGGATGGTaGGCCCGCGTCCCGCCGCCGAGCCAGAGCCAAAGACGAGGTCGG +
Preference number: 5 (lower is better)
Translates to: PLPRGRPRCSVRPGW*ARVPPPSQSQRRGR
Trigger: CCGACCTCGTCTTTGGCTCTGGCTCGGCGGCGGGACGCGGGCCCACCATCCTGGACGCACCGAACACCGAGGGCGCCCACGGGGCAGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 90 bp TTCCGTGGCGGGGGCTTCCTGCGGCAACTCCGGCTCTCTGGCCGCTaGCATGGGTGCGGGGAACTGGCACGCCCGCCGCGCAGACGAGGT +
Preference number: 5 (lower is better)
Translates to: FRGGGFLRQLRLSGR*HGCGELARPPRRRG
Trigger: ACCTCGTCTGCGCGGCGGGCGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCACGGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS TCA 90 bp CGCCCGGCCCGAGCGCCGCCAGCGGCTGGTCCCAGCAAAAGGCGCTaGAGGGCTCCTCGCGCACACCCAGAAAGCGGTCGACGTAGCCCA +
Preference number: 5 (lower is better)
Translates to: RPARAPPAAGPSKRR*RAPRAHPESGRRSP
Trigger: TGGGCTACGTCGACCGCTTTCTGGGTGTGCGCGAGGAGCCCTTCAGCGCCTTTTGCTGGGACCAGCCGCTGGCGGCGCTCGGGCCGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 90 bp CTGGGCCTCCTGACCTGTCCCCGCCAGTGTCCACTCGGCACCCTCTaGCCCGTGGGCGCCCTCGGTGTTCGGTGCGTCCAGGATGGTGGG +
Preference number: 5 (lower is better)
Translates to: LGLLTCPRQCPLGTL*PVGALGVRCVQDGG
Trigger: CCCACCATCCTGGACGCACCGAACACCGAGGGCGCCCACGGGGCAGAGGGTGCCGAGTGGACACTGGCGGGGACAGGTCAGGAGGCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS TCA 90 bp TGCCCTCGCGAGGACTCTGGCCCAGTCCCTCCTTGGTGGAGAGCCTaGCACCGCTGCTCTGGGACTTCCCGGCTGCGCCCTCCCCCAGCG +
Preference number: 5 (lower is better)
Translates to: CPREDSGPVPPWWRA*HRCSGTSRLRPPPA
Trigger: CGCTGGGGGAGGGCGCAGCCGGGAAGTCCCAGAGCAGCGGTGTCAGGCTCTCCACCAAGGAGGGACTGGGCCAGAGTCCTCGCGAGGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611161.2
CDS CCA 90 bp CTCTGGCCCAGTCCCTCCTTGGTGGAGAGCCTGACACCGCTGCTCTaGGACTTCCCGGCTGCGCCCTCCCCCAGCGCCAGGAAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: LWPSPSLVESLTPLL*DFPAAPSPSARKAS
Trigger: GCTTGCTTTCCTGGCGCTGGGGGAGGGCGCAGCCGGGAAGTCCCAGAGCAGCGGTGTCAGGCTCTCCACCAAGGAGGGACTGGGCCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611161.2
CDS CCA 90 bp CGGCTTCCAGCCTCTGGCTCAGCACTTGTGCCATGCTTTCCAGTGTaGGAGAGGGTGGGGCACACAGCACATGCGGGCCCAGGAGGACCA +
Preference number: 5 (lower is better)
Translates to: RLPASGSALVPCFPV*ERVGHTAHAGPGGP
Trigger: TGGTCCTCCTGGGCCCGCATGTGCTGTGTGCCCCACCCTCTCCCACACTGGAAAGCATGGCACAAGTGCTGAGCCAGAGGCTGGAAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 90 bp TACTCAGCCCCTCGGCTTCCAGCCTCTGGCTCAGCACTTGTGCCATaGTTTCCAGTGTGGGAGAGGGTGGGGCACACAGCACATGCGGGC +
Preference number: 5 (lower is better)
Translates to: YSAPRLPASGSALVP*FPVWERVGHTAHAG
Trigger: GCCCGCATGTGCTGTGTGCCCCACCCTCTCCCACACTGGAAAGCATGGCACAAGTGCTGAGCCAGAGGCTGGAAGCCGAGGGGCTGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp TGCCCTGGAGACTGTAGTGTACTCAGCCCCTCGGCTTCCAGCCTCTaGCTCAGCACTTGTGCCATGCTTTCCAGTGTGGGAGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: CPGDCSVLSPSASSL*LSTCAMLSSVGEGG
Trigger: CCCACCCTCTCCCACACTGGAAAGCATGGCACAAGTGCTGAGCCAGAGGCTGGAAGCCGAGGGGCTGAGTACACTACAGTCTCCAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTCTGTGCAGAGCGGCCTaGTGCTCCCTCGCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFLCRAA*CSLAWG
Trigger: CCCCCAAGCGAGGGAGCACAAGGCCGCTCTGCACAG...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTCTAAGGCGGGCCCTTTaGTCCTCGGGCCAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGLRRAL*SSGQAA
Trigger: TGCGGCCTGGCCCGAGGACAAAAGGGCCCGCCTTAG...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGAACCATGGGGCACCTaGGCCACGGTGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGEPWGT*ATVRWG
Trigger: CCCCCACCTCACCGTGGCCAAGGTGCCCCATGGTTC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp ACTAGGAAGTTGGCGCAGTGTGGGGCCACGTGGACCAGGTATTCCTaGGCCTTGGTCACTTCTGCTTGTAGCCCAGGCTCGGTCACCATG +
Preference number: 5 (lower is better)
Translates to: TRKLAQCGATWTRYS*ALVTSACSPGSVTM
Trigger: CATGGTGACCGAGCCTGGGCTACAAGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCACGTGGCCCCACACTGCGCCAACTTCCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp CCTCTGGCTCAGCACTTGTGCCATGCTTTCCAGTGTGGGAGAGGGTaGGGCACACAGCACATGCGGGCCCAGGAGGACCAGCTTTCTAAA +
Preference number: 5 (lower is better)
Translates to: PLAQHLCHAFQCGRG*GTQHMRAQEDQLSK
Trigger: TTTAGAAAGCTGGTCCTCCTGGGCCCGCATGTGCTGTGTGCCCCACCCTCTCCCACACTGGAAAGCATGGCACAAGTGCTGAGCCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATCTGTGCAGAGCGGCCTaGTGCTCCCTCGCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYLCRAA*CSLAWG
Trigger: CCCCCAAGCGAGGGAGCACAAGGCCGCTCTGCACAG...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGCTAAGGCGGGCCCTTTaGTCCTCGGGCCAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQLRRAL*SSGQAA
Trigger: TGCGGCCTGGCCCGAGGACAAAAGGGCCCGCCTTAG...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATCTAAGGCGGGCCCTTTaGTCCTCGGGCCAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYLRRAL*SSGQAA
Trigger: TGCGGCCTGGCCCGAGGACAAAAGGGCCCGCCTTAG...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CAA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGAGGGCACTAGGAAGTaGGCGCAGTGTGGGGCCACG +
Preference number: 5 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGEGTRK*AQCGAT
Trigger: CGTGGCCCCACACTGCGCCAACTTCCTAGTGCCCTC...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTATGTGTGGGGCGCGGTaGGCAAGGGGCTGCAACACT +
Preference number: 5 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFMCGAR*ARGCNT
Trigger: AGTGTTGCAGCCCCTTGCCAACCGCGCCCCACACAT...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp GTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTATGTGTGGGGCGCGGTaGGCAAGGGGCTGCAACACT +
Preference number: 5 (lower is better)
Translates to: VFPVWAVCIHCLLQRSGGMCGAR*ARGCNT
Trigger: AGTGTTGCAGCCCCTTGCCAACCGCGCCCCACACAT...ACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGAGGGCACTAGGAAGTaGGCGCAGTGTGGGGCCACG +
Preference number: 5 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQEGTRK*AQCGAT
Trigger: CGTGGCCCCACACTGCGCCAACTTCCTAGTGCCCTC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCGAACCATGGGGCACCTaGGCCACGGTGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVEPWGT*ATVRWG
Trigger: CCCCCACCTCACCGTGGCCAAGGTGCCCCATGGTTC...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGATGTGTGGGGCGCGGTaGGCAAGGGGCTGCAACACT +
Preference number: 5 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQMCGAR*ARGCNT
Trigger: AGTGTTGCAGCCCCTTGCCAACCGCGCCCCACACAT...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTAGGGTGAACTCCAGCTaGGGGAGGTGGACCTGGGAA +
Preference number: 5 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFRVNSS*GRWTWE
Trigger: TTCCCAGGTCCACCTCCCCAAGCTGGAGTTCACCCT...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGGTGAACTCCAGCTaGGGGAGGTGGACCTGGGAA +
Preference number: 5 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQRVNSS*GRWTWE
Trigger: TTCCCAGGTCCACCTCCCCAAGCTGGAGTTCACCCT...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGTGCACGCTCCTGCTTaGTCTTTCCTGTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFVHAPA*SFLCGL
Trigger: CAGCCCACACAGGAAAGACAAAGCAGGAGCGTGCAC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 90 bp GAGAGAAAGAGAGAGCGTGCACGCTCCTGCTTTGTCTTTCCTGTGTaGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCTGGGGGTGTC +
Preference number: 5 (lower is better)
Translates to: ERKRERARSCFVFPV*AVCIHCLLQRSGGV
Trigger: GACACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCGTGCACGCTCTCTCTTTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGAACCATGGGGCACCTaGGCCACGGTGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFEPWGT*ATVRWG
Trigger: CCCCCACCTCACCGTGGCCAAGGTGCCCCATGGTTC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGTGCACGCTCCTGCTTaGTCTTTCCTGTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQVHAPA*SFLCGL
Trigger: CAGCCCACACAGGAAAGACAAAGCAGGAGCGTGCAC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGAGGGCACTAGGAAGTaGGCGCAGTGTGGGGCCACG +
Preference number: 5 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFEGTRK*AQCGAT
Trigger: CGTGGCCCCACACTGCGCCAACTTCCTAGTGCCCTC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CGCTCCTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGGGCTGTTTGCATCCATaGTCTCCTCCAGAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: RSCFVFPVWAVCIHCLLQGCLHP*SPPEVW
Trigger: CCAGACCTCTGGAGGAGACAATGGATGCAAACAGCC...CTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATTGTCTCCTCCAGAGGTCGTGCACGCTCCTGCTTaGTCTTTCCTGTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LLCLSCVGCLHPLSPPEVVHAPA*SFLCGL
Trigger: CAGCCCACACAGGAAAGACAAAGCAGGAGCGTGCAC...GACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTAGGGTGAACTCCAGCTaGGGGAGGTGGACCTGGGAA +
Preference number: 5 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFRVNSS*GRWTWE
Trigger: TTCCCAGGTCCACCTCCCCAAGCTGGAGTTCACCCT...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp GGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGAGTTTGGATGTGCTATGAGTTaGCAAACAGCTGGACTGTCA +
Preference number: 5 (lower is better)
Translates to: GPPSLPLLPCNWRMCYEFGCAMS*QTAGLS
Trigger: TGACAGTCCAGCTGTTTGCAAACTCATAGCACATCC...AAACTCATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGTGCACGCTCCTGCTTaGTCTTTCCTGTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFVHAPA*SFLCGL
Trigger: CAGCCCACACAGGAAAGACAAAGCAGGAGCGTGCAC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS-3UTR CAA 90 bp CTTTTTGGCCCTCCCTCCCTCCCTCTTCTGCCATGTAACTGGAGGATGTGCTATGGATGTGCTATGAGTTaGCAAACAGCTGGACTGTCA +
Preference number: 5 (lower is better)
Translates to: LFGPPSLPLLPCNWRMCYGCAMS*QTAGLS
Trigger: TGACAGTCCAGCTGTTTGCAAACTCATAGCACATCC...ATAGCACATCCTCCAGTTACATGGCAGAAGAGGGAGGGAGGGAGGGCCAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622643.1
CDS-3UTR CAA 90 bp AACTGGAGGATGTGCTATGAGTTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGGATGTGCTATGAGTTaGCAAACAGCTGGACTGTCA +
Preference number: 5 (lower is better)
Translates to: NWRMCYEFANSWTVRLLFGCAMS*QTAGLS
Trigger: TGACAGTCCAGCTGTTTGCAAACTCATAGCACATCC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAAACTCATAGCACATCCTCCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 72 bp GCCGGCGGGGGCGCGGGTTCCGTGGCGGGGGCTTCCTaGGGCAACTCCGGCTCTCTGGCCGCTGCCATGGGT +
Preference number: 6 (lower is better)
Translates to: AGGGAGSVAGAS*GNSGSLAAAMG
Trigger: ACCCATGGCAGCGGCCAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCACGGAACCCGCGCCCCCGCCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 72 bp GGGGGCTTCCTGCGGCAACTCCGGCTCTCTGGCCGCTaGCATGGGTGCGGGGAACTGGCACGCCCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: GGFLRQLRLSGR*HGCGELARPPR
Trigger: GCGCGGCGGGCGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGCCGCAGGAAGCCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp TCCGGCTCTCTGGCCGCTGCCATGGGTGCGGGGAACTaGCACGCCCGCCGCGCAGACGAGGTCGCCCCGCAC +
Preference number: 6 (lower is better)
Translates to: SGSLAAAMGAGN*HARRADEVAPH
Trigger: GTGCGGGGCGACCTCGTCTGCGCGGCGGGCGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp TCGGCGGGGTCGAGGCGCGGGTCCCAGCGGATGCGCTaGATGACGTCCGCGGCTGTGCGCAGCGGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: SAGSRRGSQRMR*MTSAAVRSGGF
Trigger: GAAGCCGCCGCTGCGCACAGCCGCGGACGTCATCCAGCGCATCCGCTGGGACCCGCGCCTCGACCCCGCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp CCCCGTGGGCGCCCTCGGTGTTCGGTGCGTCCAGGATaGTGGGCCCGCGTCCCGCCGCCGAGCCAGAGCCAA +
Preference number: 6 (lower is better)
Translates to: PRGRPRCSVRPG*WARVPPPSQSQ
Trigger: TTGGCTCTGGCTCGGCGGCGGGACGCGGGCCCACCATCCTGGACGCACCGAACACCGAGGGCGCCCACGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS TCA 72 bp CGGGGTCGAGGCGCGGGTCCCAGCGGATGCGCTGGATaGCGTCCGCGGCTGTGCGCAGCGGCGGCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: RGRGAGPSGCAG*RPRLCAAAASW
Trigger: CCAAGAAGCCGCCGCTGCGCACAGCCGCGGACGTCATCCAGCGCATCCGCTGGGACCCGCGCCTCGACCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 72 bp CCCGCGCTCCGGCCTAGCTCTGGGGACCACGCCGCGTaGCCTCGCGAGGACTCTGGCCCAGTCCCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PALRPSSGDHAA*PREDSGPVPPW
Trigger: CCAAGGAGGGACTGGGCCAGAGTCCTCGCGAGGGCACGCGGCGTGGTCCCCAGAGCTAGGCCGGAGCGCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp CCGTGGCGGGGGCTTCCTGCGGCAACTCCGGCTCTCTaGCCGCTGCCATGGGTGCGGGGAACTGGCACGCCC +
Preference number: 6 (lower is better)
Translates to: PWRGLPAATPAL*PLPWVRGTGTP
Trigger: GGGCGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCACGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp CTTCCTGCGGCAACTCCGGCTCTCTGGCCGCTGCCATaGGTGCGGGGAACTGGCACGCCCGCCGCGCAGACG +
Preference number: 6 (lower is better)
Translates to: LPAATPALWPLP*VRGTGTPAAQT
Trigger: CGTCTGCGCGGCGGGCGTGCCAGTTCCCCGCACCCATGGCAGCGGCCAGAGAGCCGGAGTTGCCGCAGGAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp CGTGGGCGCCCTCGGTGTTCGGTGCGTCCAGGATGGTaGGCCCGCGTCCCGCCGCCGAGCCAGAGCCAAAGA +
Preference number: 6 (lower is better)
Translates to: RGRPRCSVRPGW*ARVPPPSQSQR
Trigger: TCTTTGGCTCTGGCTCGGCGGCGGGACGCGGGCCCACCATCCTGGACGCACCGAACACCGAGGGCGCCCACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 72 bp CTGACCTGTCCCCGCCAGTGTCCACTCGGCACCCTCTaGCCCGTGGGCGCCCTCGGTGTTCGGTGCGTCCAG +
Preference number: 6 (lower is better)
Translates to: LTCPRQCPLGTL*PVGALGVRCVQ
Trigger: CTGGACGCACCGAACACCGAGGGCGCCCACGGGGCAGAGGGTGCCGAGTGGACACTGGCGGGGACAGGTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp GTCCCCGCCAGTGTCCACTCGGCACCCTCTGCCCCGTaGGCGCCCTCGGTGTTCGGTGCGTCCAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: VPASVHSAPSAP*APSVFGASRMV
Trigger: CACCATCCTGGACGCACCGAACACCGAGGGCGCCCACGGGGCAGAGGGTGCCGAGTGGACACTGGCGGGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CAA 90 bp GGACCACGCCGCGTGCCCTCGCGAGGACTCTGGCCCAGTCCCTCCTaGGTGGAGAGCCTGACACCGCTGCTCTGGGACTTCCCGGCTGCG +
Preference number: 6 (lower is better)
Translates to: GPRRVPSRGLWPSPS*VESLTPLLWDFPAA
Trigger: CGCAGCCGGGAAGTCCCAGAGCAGCGGTGTCAGGCTCTCCACCAAGGAGGGACTGGGCCAGAGTCCTCGCGAGGGCACGCGGCGTGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611161.2
CDS CCA 72 bp AGTCCCTCCTTGGTGGAGAGCCTGACACCGCTGCTCTaGGACTTCCCGGCTGCGCCCTCCCCCAGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: SPSLVESLTPLL*DFPAAPSPSAR
Trigger: CCTGGCGCTGGGGGAGGGCGCAGCCGGGAAGTCCCAGAGCAGCGGTGTCAGGCTCTCCACCAAGGAGGGACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611161.2
CDS CCA 72 bp CTCTGGGGACCACGCCGCGTGCCCTCGCGAGGACTCTaGCCCAGTCCCTCCTTGGTGGAGAGCCTGACACCG +
Preference number: 6 (lower is better)
Translates to: LWGPRRVPSRGL*PSPSLVESLTP
Trigger: CGGTGTCAGGCTCTCCACCAAGGAGGGACTGGGCCAGAGTCCTCGCGAGGGCACGCGGCGTGGTCCCCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611161.2
CDS TCA 72 bp CGAGCGCCGCCAGCGGCTGGTCCCAGCAAAAGGCGCTaGAGGGCTCCTCGCGCACACCCAGAAAGCGGTCGA +
Preference number: 6 (lower is better)
Translates to: RAPPAAGPSKRR*RAPRAHPESGR
Trigger: TCGACCGCTTTCTGGGTGTGCGCGAGGAGCCCTTCAGCGCCTTTTGCTGGGACCAGCCGCTGGCGGCGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 72 bp GGAGAGCCTGACACCGCTGCTCTGGGACTTCCCGGCTaGGCCCTCCCCCAGCGCCAGGAAAGCAAGCTGCGT +
Preference number: 6 (lower is better)
Translates to: GEPDTAALGLPG*ALPQRQESKLR
Trigger: ACGCAGCTTGCTTTCCTGGCGCTGGGGGAGGGCGCAGCCGGGAAGTCCCAGAGCAGCGGTGTCAGGCTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611161.2
CDS CCA 72 bp GCCTCCAGCTCTCCGGGTTCCTCCACGCCTGGTTCCTaGTGCCCTGTGCAGAGCGGCCTTGTGCTCCCTCGC +
Preference number: 6 (lower is better)
Translates to: ASSSPGSSTPGS*CPVQSGLVLPR
Trigger: GCGAGGGAGCACAAGGCCGCTCTGCACAGGGCACCAGGAACCAGGCGTGGAGGAACCCGGAGAGCTGGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS TCA 72 bp GAGGACTCTGGCCCAGTCCCTCCTTGGTGGAGAGCCTaGCACCGCTGCTCTGGGACTTCCCGGCTGCGCCCT +
Preference number: 6 (lower is better)
Translates to: EDSGPVPPWWRA*HRCSGTSRLRP
Trigger: AGGGCGCAGCCGGGAAGTCCCAGAGCAGCGGTGTCAGGCTCTCCACCAAGGAGGGACTGGGCCAGAGTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611161.2
CDS CAA 72 bp GGTTGGCAAGGGGCTGCAACACTAAGGCGGGCCCTTTaGTCCTCGGGCCAGGCCGCAGGACCCCACTCGGCT +
Preference number: 6 (lower is better)
Translates to: GWQGAATLRRAL*SSGQAAGPHSA
Trigger: AGCCGAGTGGGGTCCTGCGGCCTGGCCCGAGGACAAAAGGGCCCGCCTTAGTGTTGCAGCCCCTTGCCAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS GCA 72 bp TCCAGCTCTCCGGGTTCCTCCACGCCTGGTTCCTGGTaGCCTGTGCAGAGCGGCCTTGTGCTCCCTCGCTTG +
Preference number: 6 (lower is better)
Translates to: SSSPGSSTPGSW*PVQSGLVLPRL
Trigger: CAAGCGAGGGAGCACAAGGCCGCTCTGCACAGGGCACCAGGAACCAGGCGTGGAGGAACCCGGAGAGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp TGGCTGAGGGTGAACTCCAGCTTGGGGAGGTGGACCTaGGAACCATGGGGCACCTTGGCCACGGTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: WLRVNSSLGRWT*EPWGTLATVRW
Trigger: CCACCTCACCGTGGCCAAGGTGCCCCATGGTTCCCAGGTCCACCTCCCCAAGCTGGAGTTCACCCTCAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CAA 90 bp AAGTTGGCGCAGTGTGGGGCCACGTGGACCAGGTATTCCTGGGCCTaGGTCACTTCTGCTTGTAGCCCAGGCTCGGTCACCATGAGGGCC +
Preference number: 6 (lower is better)
Translates to: KLAQCGATWTRYSWA*VTSACSPGSVTMRA
Trigger: GGCCCTCATGGTGACCGAGCCTGGGCTACAAGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCACGTGGCCCCACACTGCGCCAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp TTGGCGCAGTGTGGGGCCACGTGGACCAGGTATTCCTaGGCCTTGGTCACTTCTGCTTGTAGCCCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: LAQCGATWTRYS*ALVTSACSPGS
Trigger: CGAGCCTGGGCTACAAGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCACGTGGCCCCACACTGCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CAA 72 bp CAGTGTGGGGCCACGTGGACCAGGTATTCCTGGGCCTaGGTCACTTCTGCTTGTAGCCCAGGCTCGGTCACC +
Preference number: 6 (lower is better)
Translates to: QCGATWTRYSWA*VTSACSPGSVT
Trigger: GGTGACCGAGCCTGGGCTACAAGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCACGTGGCCCCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp AGTGTGGGGCCACGTGGACCAGGTATTCCTGGGCCTTaGTCACTTCTGCTTGTAGCCCAGGCTCGGTCACCA +
Preference number: 6 (lower is better)
Translates to: SVGPRGPGIPGP*SLLLVAQARSP
Trigger: TGGTGACCGAGCCTGGGCTACAAGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCACGTGGCCCCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp GAGGGCACTAGGAAGTTGGCGCAGTGTGGGGCCACGTaGACCAGGTATTCCTGGGCCTTGGTCACTTCTGCT +
Preference number: 6 (lower is better)
Translates to: EGTRKLAQCGAT*TRYSWALVTSA
Trigger: AGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCACGTGGCCCCACACTGCGCCAACTTCCTAGTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CCA 72 bp GACTGTAGTGTACTCAGCCCCTCGGCTTCCAGCCTCTaGCTCAGCACTTGTGCCATGCTTTCCAGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: DCSVLSPSASSL*LSTCAMLSSVG
Trigger: TCCCACACTGGAAAGCATGGCACAAGTGCTGAGCCAGAGGCTGGAAGCCGAGGGGCTGAGTACACTACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1
CDS CAA 72 bp CTGCTTTGTCTTTCCTGTGTGGGCTGTTTGCATCCATaGTCTCCTCCAGAGGTCTGGGGGTGTCACTCCAGG +
Preference number: 6 (lower is better)
Translates to: LLCLSCVGCLHP*SPPEVWGCHSR
Trigger: CCTGGAGTGACACCCCCAGACCTCTGGAGGAGACAATGGATGCAAACAGCCCACACAGGAAAGACAAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611161.2
ENST00000614111.1
ENST00000622419.1
ENST00000622643.1