RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LEMD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000161904

Ensembl transcript IDs: ENST00000293760.10, ENST00000421671.6, ENST00000442696.6, ENST00000502643.5, ENST00000504692.1, ENST00000506578.5, ENST00000508327.5, ENST00000510598.5, ENST00000511171.5, ENST00000512368.5, ENST00000513701.1, ENST00000513832.5, ENST00000514636.1, ENST00000614475.4

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGAGGCGGGCCCGCCCGCCCTGGGGCTGCCCGACCCTCCTCTCTaGTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: TEAGPPALGLPDPPL*SQPQSLLRDPPRRL
Trigger: CAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGGGCAGCCCCAGGGCGGGCGGGCCCGCCTCAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR TCA 90 bp AATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTaGGAAGCAACACTGAGGCGGGCCCGCCCGCCCTGGGGCTGCCCG +
Preference number: 1 (lower is better)
Translates to: NRRSGCRPGLESQLL*EATLRRARPPWGCP
Trigger: CGGGCAGCCCCAGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR TCA 90 bp AAGCAAGGCGATCTTCGCACACAGCAAGTGCGAGGCTCTGGGCCCTaGCGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: KQGDLRTQQVRGSGP*RRAPKLPESAFWLQ
Trigger: CTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAAGATCGCCTTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR CCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTaGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGAGGCGGGC +
Preference number: 1 (lower is better)
Translates to: RRAPKLPESAFWLQA*SRVAASVRSNTEAG
Trigger: GCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR CCA 90 bp GTGAGCAAGGCCCGGCTCAGGCGGCAGCCAACACCCATGCGGGGGTaGGCAGATTCCAGGCAGACCACCTTGTCCACAGTCGTCACCAAT +
Preference number: 1 (lower is better)
Translates to: VSKARLRRQPTPMRG*ADSRQTTLSTVVTN
Trigger: ATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGGAATCTGCCCACCCCCGCATGGGTGTTGGCTGCCGCCTGAGCCGGGCCTTGCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 90 bp CCTCTCCTGCAACGCGGTGGGACTCCGTCTGGATCCGGGATTCGTTaGAGGCCAGGAACTCCACAGCTCGGTCCCAGACACGCTTCATGC +
Preference number: 1 (lower is better)
Translates to: PLLQRGGTPSGSGIR*RPGTPQLGPRHASC
Trigger: GCATGAAGCGTGTCTGGGACCGAGCTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 90 bp CTCCACACCAGCATGTCCTCTCCTGCAACGCGGTGGGACTCCGTCTaGATCCGGGATTCGTTGGAGGCCAGGAACTCCACAGCTCGGTCC +
Preference number: 1 (lower is better)
Translates to: LHTSMSSPATRWDSV*IRDSLEARNSTARS
Trigger: GGACCGAGCTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTGGTGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 90 bp CACAGTAAAGCAAGGCGATCTTCGCACACAGCAAGTGCGAGGCTCTaGGCCCTGACGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTG +
Preference number: 1 (lower is better)
Translates to: HSKARRSSHTASARL*ALTQGSQAPGIGVL
Trigger: CAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAAGATCGCCTTGCTTTACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR TCA 90 bp GGGAGCAGAGCCACTCTTGGCCCTGGGGTCTGCACTGCCCTCAGCTaGCATCTGATGCAAGGCTCTGGGTTTCCTTCTGGGGAGCTCAGT +
Preference number: 1 (lower is better)
Translates to: GSRATLGPGVCTALS*HLMQGSGFPSGELS
Trigger: ACTGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCAGTGCAGACCCCAGGGCCAAGAGTGGCTCTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR GCA 90 bp GCCTCCGGCTCTGTGGAGGGATCAAGCTGTCGCGCACGTGCAGGATaGCTACATATGGATAGCGCTCCATGTCCTGCTCCCAGTCCACGT +
Preference number: 1 (lower is better)
Translates to: ASGSVEGSSCRARAG*LHMDSAPCPAPSPR
Trigger: ACGTGGACTGGGAGCAGGACATGGAGCGCTATCCATATGTAGGCATCCTGCACGTGCGCGACAGCTTGATCCCTCCACAGAGCCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR GCA 90 bp CAGCAGGAGTGGGAGCAGAGCCACTCTTGGCCCTGGGGTCTGCACTaGCCTCAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTGG +
Preference number: 1 (lower is better)
Translates to: QQEWEQSHSWPWGLH*PQLTSDARLWVSFW
Trigger: CCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCAGTGCAGACCCCAGGGCCAAGAGTGGCTCTGCTCCCACTCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR CCA 90 bp GGCTTAGTCCATCTCCACACCAGCATGTCCTCTCCTGCAACGCGGTaGGACTCCGTCTGGATCCGGGATTCGTTGGAGGCCAGGAACTCC +
Preference number: 1 (lower is better)
Translates to: GLVHLHTSMSSPATR*DSVWIRDSLEARNS
Trigger: GGAGTTCCTGGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTGGTGTGGAGATGGACTAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR TCA 90 bp GGACAGGCTGACCGGGAACAAGTCCCCGCCCGGGGCTTATCGCTCTaGGTCAGAGAAGGAAGAGGGCTTAGTCCATCTCCACACCAGCAT +
Preference number: 1 (lower is better)
Translates to: GQADREQVPARGLSL*VREGRGLSPSPHQH
Trigger: ATGCTGGTGTGGAGATGGACTAAGCCCTCTTCCTTCTCTGACTCAGAGCGATAAGCCCCGGGCGGGGACTTGTTCCCGGTCAGCCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR GCA 90 bp GAAGGAAGAGGGCTTAGTCCATCTCCACACCAGCATGTCCTCTCCTaGAACGCGGTGGGACTCCGTCTGGATCCGGGATTCGTTGGAGGC +
Preference number: 1 (lower is better)
Translates to: EGRGLSPSPHQHVLS*NAVGLRLDPGFVGG
Trigger: GCCTCCAACGAATCCCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTGGTGTGGAGATGGACTAAGCCCTCTTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 90 bp CACTGCCCTCAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTaGGGAGCTCAGTGGGGTCGGACCCCATCTTACCTCACACCCAGC +
Preference number: 1 (lower is better)
Translates to: HCPQLTSDARLWVSF*GAQWGRTPSYLTPS
Trigger: GCTGGGTGTGAGGTAAGATGGGGTCCGACCCCACTGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR TCA 90 bp ACAGGCTTTCTCCCTTCACCCTGGAGCTCTCAAGTAACAACCCCCTaGAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAAC +
Preference number: 1 (lower is better)
Translates to: TGFLPSPWSSQVTTP*RHMDQAAPHPATRN
Trigger: GTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAGGGGGTTGTTACTTGAGAGCTCCAGGGTGAAGGGAGAAAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR TCA 90 bp GCTGTGGAATTTCCTGTTTGCTCCCCCTCTCCTGCCTGCCGCAGATaGGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTTA +
Preference number: 1 (lower is better)
Translates to: AVEFPVCSPSPACRR*GHTGKTRWRGFSHL
Trigger: TAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR CCA 90 bp CTGTGGAGGGATCAAGCTGTCGCGCACGTGCAGGATGCCTACATATaGATAGCGCTCCATGTCCTGCTCCCAGTCCACGTAATGGTCCTG +
Preference number: 1 (lower is better)
Translates to: LWRDQAVAHVQDAYI*IALHVLLPVHVMVL
Trigger: CAGGACCATTACGTGGACTGGGAGCAGGACATGGAGCGCTATCCATATGTAGGCATCCTGCACGTGCGCGACAGCTTGATCCCTCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 90 bp TGCGGTGTTTCTTATTTTTCTGGCTGGAGCCTGATTATGAGAACATaGCCTCACCACGGGGCCAGCGCTCAGATTCCTGCCCTGCCGATC +
Preference number: 1 (lower is better)
Translates to: CGVSYFSGWSLIMRT*PHHGASAQIPALPI
Trigger: GATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAGGCCATGTTCTCATAATCAGGCTCCAGCCAGAAAAATAAGAAACACCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR GCA 90 bp CAACCAGATGCCCACGTCCTTGTTACTGCTCAGTATCCAGGTCAGTaGGGCTTCAAACTTGGCGGAGGAGCTGCTGGTCACATTGGCTAT +
Preference number: 1 (lower is better)
Translates to: QPDAHVLVTAQYPGQ*GFKLGGGAAGHIGY
Trigger: ATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 90 bp AGATCCTTCACTACTTGTGCCCTGGGGGAGGGAGCTGCTATTACTTaGAGCCCAAGGCCTCCTAACTGGTATCACCACTGCCAGTGTTCT +
Preference number: 1 (lower is better)
Translates to: RSFTTCALGEGAAIT*SPRPPNWYHHCQCS
Trigger: AGAACACTGGCAGTGGTGATACCAGTTAGGAGGCCTTGGGCTCCAAGTAATAGCAGCTCCCTCCCCCAGGGCACAAGTAGTGAAGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR GCA 90 bp GATTATGAGAACATGGCCTCACCACGGGGCCAGCGCTCAGATTCCTaGCCTGCCGATCATCCAGACATCAGAGGAAATGAGAGTATTGCT +
Preference number: 1 (lower is better)
Translates to: DYENMASPRGQRSDS*PADHPDIRGNESIA
Trigger: AGCAATACTCTCATTTCCTCTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAGGCCATGTTCTCATAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR CCA 90 bp AGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTGGCTaGAGCCTGATTATGAGAACATGGCCTCACCACGGGGCCAGCGCT +
Preference number: 1 (lower is better)
Translates to: SPDTEACCGVSYFSG*SLIMRTWPHHGASA
Trigger: AGCGCTGGCCCCGTGGTGAGGCCATGTTCTCATAATCAGGCTCCAGCCAGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR CCA 90 bp CGTCCTTGTTACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTTaGCGGAGGAGCTGCTGGTCACATTGGCTATATATTCTTGGGCTT +
Preference number: 1 (lower is better)
Translates to: RPCYCSVSRSVRLQT*RRSCWSHWLYILGL
Trigger: AAGCCCAAGAATATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR GCA 90 bp GATGGCCAGGAAATTGTAGAGTTCATGCAGCAGCTCCAGCAAGGCTaGCTTCTGCTTGGCCTGACAGAACTCATCTGTTTTTCTCTCACA +
Preference number: 1 (lower is better)
Translates to: DGQEIVEFMQQLQQG*LLLGLTELICFSLT
Trigger: TGTGAGAGAAAAACAGATGAGTTCTGTCAGGCCAAGCAGAAGGCAGCCTTGCTGGAGCTGCTGCATGAACTCTACAATTTCCTGGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 90 bp CATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAAT +
Preference number: 1 (lower is better)
Translates to: HFPASRTPLKSMADL*NRVRTRLKVKASVN
Trigger: ATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR TCA 90 bp GCGCTCAGATTCCTGCCCTGCCGATCATCCAGACATCAGAGGAAATaGGAGTATTGCTCAAATGAGGGAGACTGGAGCTTTATTAAGGAA +
Preference number: 1 (lower is better)
Translates to: ALRFLPCRSSRHQRK*EYCSNEGDWSFIKE
Trigger: TTCCTTAATAAAGCTCCAGTCTCCCTCATTTGAGCAATACTCTCATTTCCTCTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR GCA 90 bp TGGTATCACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTaGTTTCATATGTCTTTTCTAGCTCATCCTGCCATAAAGAGCCGA +
Preference number: 1 (lower is better)
Translates to: WYHHCQCSLYRGVGL*FHMSFLAHPAIKSR
Trigger: TCGGCTCTTTATGGCAGGATGAGCTAGAAAAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGTGATACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR GCA 90 bp ATAGTTTATTCATCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTaGGGTGTTTCTTATTTTTCTGGCTGGAGCCTGATTATGAGAACA +
Preference number: 1 (lower is better)
Translates to: IVYSSSSFSPDTEAC*GVSYFSGWSLIMRT
Trigger: TGTTCTCATAATCAGGCTCCAGCCAGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGATGAATAAACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CTGAGGCGGGCCCGCCCGCCCTGGGGCTGCCCGACCCTCCTCTCTGCTCTCAGCGCGCCTCCGGCTCTGTaGAGGGATCAAGCTGTCGCG +
Preference number: 2 (lower is better)
Translates to: LRRARPPWGCPTLLSALSAPPAL*RDQAVA
Trigger: CGCGACAGCTTGATCCCTCCACAGAGCCGGAGGCGC...GCTGAGAGCAGAGAGGAGGGTCGGGCAGCCCCAGGGCGGGCGGGCCCGCCTCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR TCA 90 bp CTGAGGCGGGCCCGCCCGCCCTGGGGCTGCCCGACCCTCCTCTCTGCTCTCAGCTCACTCCTCCTGACCTaGGGGACCGTGTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: LRRARPPWGCPTLLSALSSLLLT*GTVCLG
Trigger: GCCCAGACACACGGTCCCTCAGGTCAGGAGGAGTGA...GCTGAGAGCAGAGAGGAGGGTCGGGCAGCCCCAGGGCGGGCGGGCCCGCCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp CATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCCGAGGCTCTGGGCCCTaGCGCAGGGCTCCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: HPCPTSQVTDSLAWPCPSRGSGP*RRAPKL
Trigger: GAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCTCG...GCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp CATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCGCACCGCAGGCCTGGTaGCCCTCCTGTGCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: HPCPTSQVTDSLAWPCPSAPQAW*PSCASG
Trigger: TCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGC...GCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp CCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCGCCCCACCTCCCAGGTaGCAGACTCCCTGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: PIPPPETPSLPHLPGDRLAPPPR*QTPWRG
Trigger: GCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGC...GAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp TCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGAGGCGGGCCCGCCCGCCCTGCGGCAGGGGGCAGCCTaGAGCCACTGCGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SRVAASVRSNTEAGPPALRQGAA*SHCASP
Trigger: GGGAGAGGCGCAGTGGCTGCAGGCTGCCCCCTGCCG...CAGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
3UTR-3UTR CCA 90 bp AGGCTCTGGGCCCTGACGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTCCGTCGGGGTGCTTCTaGAGCCTGCCTCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RLWALTQGSQAPGIGVLAPSGCF*SLPPRE
Trigger: CTCCCTGGGAGGCAGGCTCCAGAAGCACCCCGACGG...AGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp CACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGGCACCGCAGGCCTGGTaGCCCTCCTGTGCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: HPKHHPCPTSQVTDSLAWAPQAW*PSCASG
Trigger: TCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGC...CCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp ATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGCCCCACCTCCCAGGTaGCAGACTCCCTGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: IPPPETPSLPHLPGDRLPAPPPR*QTPWRG
Trigger: GCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGC...AGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp TCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGAGGCGGGCCCGCCCGCCCTGGCACCGCAGGCCTGGTaGCCCTCCTGTGCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: SRVAASVRSNTEAGPPALAPQAW*PSCASG
Trigger: TCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGC...CAGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp CTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGTGTGAGAAGCAACACTaGGGCGGGCCCGCCCGCCCT +
Preference number: 2 (lower is better)
Translates to: LPSSRNRRSGCRPGLESQCEKQH*GGPARP
Trigger: AGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACA...CTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp CTCCCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGAGCACATGGACCAAGCTaGTCCCCATCCCGCCACCCG +
Preference number: 2 (lower is better)
Translates to: LPIPPPETPSLPHLPGDRAHGPS*SPSRHP
Trigger: CGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGC...TCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp AGGCTCTGGGCCCTGACGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTTGGAGTGGGCTGTCCTaGGACAGGCTGACCGGGAAC +
Preference number: 2 (lower is better)
Translates to: RLWALTQGSQAPGIGVLAWSGLS*DRLTGN
Trigger: GTTCCCGGTCAGCCTGTCCCAGGACAGCCCACTCCA...AGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp AGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCACTCCTCCTGGCAAGTGCGAGGCTCTaGGCCCTGACGCAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: SPYFGILPGGCAGCSLLLASARL*ALTQGS
Trigger: GGAGCCCTGCGTCAGGGCCCAGAGCCTCGCACTTGC...CAGGAGGAGTGAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp AAAGCAAGGCGATCTTCGCACACAGCAAGTGCGAGGCTCTGGGCCCTGACGCAGGCCCCACCTCCCAGGTaGCAGACTCCCTGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: KARRSSHTASARLWALTQAPPPR*QTPWRG
Trigger: GCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGC...CTGCGTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAAGATCGCCTTGCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp ATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGCACATGGACCAAGCTaGTCCCCATCCCGCCACCCG +
Preference number: 2 (lower is better)
Translates to: IPPPETPSLPHLPGDRLPAHGPS*SPSRHP
Trigger: CGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGC...AGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp AGGCTCTGGGCCCTGACGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTTTGCTCCCCCTCTCCTaGCTGCCGCAGATGAGGACA +
Preference number: 2 (lower is better)
Translates to: RLWALTQGSQAPGIGVLALLPLS*LPQMRT
Trigger: TGTCCTCATCTGCGGCAGGCAGGAGAGGGGGAGCAA...AGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CTCCCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGATGGAGTGGGCTGTCCTaGGACAGGCTGACCGGGAAC +
Preference number: 2 (lower is better)
Translates to: LPIPPPETPSLPHLPGDRWSGLS*DRLTGN
Trigger: GTTCCCGGTCAGCCTGTCCCAGGACAGCCCACTCCA...TCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp GCCGGCTGCGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGGGCTGTGGTCACAGCAAGTGCGAGGCTCTaGGCCCTGACGCAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: AGCAEVLVKQPRVGAVVTASARL*ALTQGS
Trigger: GGAGCCCTGCGTCAGGGCCCAGAGCCTCGCACTTGC...TGTGACCACAGCCCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 2 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp TCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGAGGCGGGCCCGCCCGCCCTGTCACTCCTCCTGACCTaGGGGACCGTGTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: SRVAASVRSNTEAGPPALSLLLT*GTVCLG
Trigger: GCCCAGACACACGGTCCCTCAGGTCAGGAGGAGTGA...CAGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp CTCCCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGATTCGCACACAGCAAGTaGGAGGCTCTGGGCCCTGAC +
Preference number: 2 (lower is better)
Translates to: LPIPPPETPSLPHLPGDRFAHSK*EALGPD
Trigger: GTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAA...TCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp CCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCAGCATGTCCTCTCCTaGAACGCGGTGGGACTCCGT +
Preference number: 2 (lower is better)
Translates to: PIPPPETPSLPHLPGDRLQHVLS*NAVGLR
Trigger: ACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTG...GAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CCA 90 bp CCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGATGGAGTGGGCTGTCCTaGGACAGGCTGACCGGGAAC +
Preference number: 2 (lower is better)
Translates to: PTLLSALSPSPYFGILPGWSGLS*DRLTGN
Trigger: GTTCCCGGTCAGCCTGTCCCAGGACAGCCCACTCCA...TCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CCTCTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTCCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: PLLPAADEDTRGRLAGEAPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...AGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp AGGCTCTGGGCCCTGACGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGTGCGGCTTCAAACTTaGCGGAGGAGCTGCTGGTCA +
Preference number: 2 (lower is better)
Translates to: RLWALTQGSQAPGIGVLAVRLQT*RRSCWS
Trigger: TGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCAC...AGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR TCA 90 bp GCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGCCCCACCTCCCAGGTaGCAGACTCCCTGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: AFWLQAWSRVAASVRSNTAPPPR*QTPWRG
Trigger: GCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGC...AGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp CCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCAATCGGCGTTCTGGCTaGAGGCCTGGTCTAGAGTCG +
Preference number: 2 (lower is better)
Translates to: PIPPPETPSLPHLPGDRLNRRSG*RPGLES
Trigger: CGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATT...GAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTGGAGTGGGCTGTCCTaGGACAGGCTGACCGGGAAC +
Preference number: 2 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLWSGLS*DRLTGN
Trigger: GTTCCCGGTCAGCCTGTCCCAGGACAGCCCACTCCA...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp TGGGACTCCGTCTGGATCCGGGATTCGTTGGAGGCCAGGAACTCCACAGCTCGGCCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: WDSVWIRDSLEARNSTARPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...CCGAGCTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CCA 90 bp CTCACCACGGGGCCAGCGCTCAGATTCCTGCCCTGCCGATCATCCAGACATCAGCCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: LTTGPALRFLPCRSSRHQPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...CTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR CAA 90 bp TCCTCTCCTGCAACGCGGTGGGACTCCGTCTGGATCCGGGATTCGTaGGAGGCCAGGAACTCCACAGCTCGGTCCCAGACACGCTTCATG +
Preference number: 2 (lower is better)
Translates to: SSPATRWDSVWIRDS*EARNSTARSQTRFM
Trigger: CATGAAGCGTGTCTGGGACCGAGCTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR TCA 90 bp CAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTATGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 2 (lower is better)
Translates to: QHNRAESGLSPWLLPLPLCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp AGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 2 (lower is better)
Translates to: SQGKCEFSTAGLVTLLCLCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...GAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp AGGCTCTGGGCCCTGACGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTCGAGCCGAACTCCTCTaGAGAGTATGGCAGACCTTT +
Preference number: 2 (lower is better)
Translates to: RLWALTQGSQAPGIGVLARAELL*RVWQTF
Trigger: AAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCG...AGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp CCAAGAGCCGCGGCCGGGGTAACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTATCACTCCTCCTGACCTaGGGGACCGTGTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: PRAAAGVTETPAALKFLLSLLLT*GTVCLG
Trigger: GCCCAGACACACGGTCCCTCAGGTCAGGAGGAGTGA...TAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTTACCCCGGCCGCGGCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp GGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTCCGGCAGGGGGCAGCCTaGAGCCACTGCGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: GVVNVSGGSCGISCLLPLRQGAA*SHCASP
Trigger: GGGAGAGGCGCAGTGGCTGCAGGCTGCCCCCTGCCG...GAGGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
3UTR-3UTR CCA 90 bp CCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCCCACCAGCCAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGA +
Preference number: 2 (lower is better)
Translates to: PTSQVTDSLAWPCPSPPASMADL*NRVRTR
Trigger: TCTCGTCCTGACACGATTCCAAAGGTCTGCCATACT...GGCTGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp TCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCTCTGGGCTATCACCCTaGCTTCTCCCCCTCCCTTTA +
Preference number: 2 (lower is better)
Translates to: SQPQSLLRDPPRRLCRLLSGLSP*LLPLPL
Trigger: TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGA...GAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp GAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCACAGACTCCCTGGCGTaGCCATGCCCCAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: ESAFWLQAWSRVAASVRSTDSLA*PCPSPP
Trigger: TGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGT...GCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCCGGAATCGGCGTTCTaGCTGCAGGCCTGGTCTAGA +
Preference number: 2 (lower is better)
Translates to: LLPAADEDTRGRLAGEASPESAF*LQAWSR
Trigger: TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGG...AGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CTCCCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGAACGGGGAAGACTCGCTaGAGAGGCTTCTCGCACTTA +
Preference number: 2 (lower is better)
Translates to: LPIPPPETPSLPHLPGDRTGKTR*RGFSHL
Trigger: TAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGT...TCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGGTGGGACTCCGTCTaGATCCGGGATTCGTTGGAG +
Preference number: 2 (lower is better)
Translates to: LLPAADEDTRGRLAGEASRWDSV*IRDSLE
Trigger: CTCCAACGAATCCCGGATCCAGACGGAGTCCCACCG...AGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR TCA 90 bp GCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTAAATGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 2 (lower is better)
Translates to: AQQGRVWAITLASPPPFKCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...TTTAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp CCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTTAATTGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 2 (lower is better)
Translates to: PQMRTHGEDSLERLLALNCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...ATTAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp TCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCTGGCACCGCAGGCCTGGTaGCCCTCCTGTGCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: SPPPFKGSPHFPASRTPLAPQAW*PSCASG
Trigger: TCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGC...CAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp AGTGGGCTGTCCTGGGACAGGCTGACCGGGAACAAGTCCCCGCCCGGGGCTTATAAGTCAAGGCAAGTGTaGATTCAGCACCGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: SGLSWDRLTGNKSPPGAYKSRQV*IQHRRP
Trigger: AGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTT...ATAAGCCCCGGGCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACAGCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR TCA 90 bp GGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTCCGAGGCTCTGGGCCCTaGCGCAGGGCTCCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: GVVNVSGGSCGISCLLPLRGSGP*RRAPKL
Trigger: GAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCTCG...GAGGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp GAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCCCTGCCTGCCGCAGATaGGGACACACGGGGAAGACT +
Preference number: 2 (lower is better)
Translates to: ESAFWLQAWSRVAASVRSPACRR*GHTGKT
Trigger: AGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGG...GCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp CTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTAATCGGCGTTCTGGCTaGAGGCCTGGTCTAGAGTCG +
Preference number: 2 (lower is better)
Translates to: LLPAADEDTRGRLAGEASNRRSG*RPGLES
Trigger: CGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATT...AGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGACTCAGATTCCTGCCCTaGCGATCATCCAGACATCAG +
Preference number: 2 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRLRFLP*RSSRHQ
Trigger: CTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAG...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp TTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTGGAGTGGGCTGTCCTaGGACAGGCTGACCGGGAAC +
Preference number: 2 (lower is better)
Translates to: FSPFLPAQQGRVWAITLAWSGLS*DRLTGN
Trigger: GTTCCCGGTCAGCCTGTCCCAGGACAGCCCACTCCA...AGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGACAACAGGGCAGAGTCTaGGCTATCACCCTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: PTLLSALSPSPYFGILPGQQGRV*AITLAS
Trigger: AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTG...TCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CCTCTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTCAACAGGGCAGAGTCTaGGCTATCACCCTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: PLLPAADEDTRGRLAGEAQQGRV*AITLAS
Trigger: AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTG...AGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp AGGCTCTGGGCCCTGACGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTTTCTGGAGGCAGCTGTaGAATTTCCTGTTTGCTCCC +
Preference number: 2 (lower is better)
Translates to: RLWALTQGSQAPGIGVLAFWRQL*NFLFAP
Trigger: GGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAA...AGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp TCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGAGGCGGGCCCGCCCGCCCTGCGAGCCGAACTCCTCTaGAGAGTATGGCAGACCTTT +
Preference number: 2 (lower is better)
Translates to: SRVAASVRSNTEAGPPALRAELL*RVWQTF
Trigger: AAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCG...CAGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp GAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTGTGAGAAGCAACACTaGGGCGGGCCCGCCCGCCCT +
Preference number: 2 (lower is better)
Translates to: EGWLMFLEAAVEFPVCSPCEKQH*GGPARP
Trigger: AGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACA...GGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp TTGGTGACAGCAGTGAGCAAGGCCCGGCTCAGGCGGCAGCCAACACCCATGCGGAAGCCCACATTTTCCTaGGAGCCGAACTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: LVTAVSKARLRRQPTPMRKPTFS*EPNSSE
Trigger: TTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTT...CCGCATGGGTGTTGGCTGCCGCCTGAGCCGGGCCTTGCTCACTGCTGTCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR GCA 90 bp AAAGCAAGGCGATCTTCGCACACAGCAAGTGCGAGGCTCTGGGCCCTGACGCAGAATCGGCGTTCTGGCTaGAGGCCTGGTCTAGAGTCG +
Preference number: 2 (lower is better)
Translates to: KARRSSHTASARLWALTQNRRSG*RPGLES
Trigger: CGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATT...CTGCGTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAAGATCGCCTTGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp TTGGTGACAGCAGTGAGCAAGGCCCGGCTCAGGCGGCAGCCAACACCCATGCGGCCACGTCCTTGTTACTaGTCAGTATCCAGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: LVTAVSKARLRRQPTPMRPRPCY*SVSRSV
Trigger: CACTGACCTGGATACTGAGCAGTAACAAGGACGTGG...CCGCATGGGTGTTGGCTGCCGCCTGAGCCGGGCCTTGCTCACTGCTGTCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CCA 90 bp AACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGGGCTCCGGAATCGGCGTTCTaGCTGCAGGCCTGGTCTAGA +
Preference number: 2 (lower is better)
Translates to: NRNAGCAEVLVKQPRVGAPESAF*LQAWSR
Trigger: TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGG...AGCCCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp CCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGCTGGGCCTGACAGCTaGTGCTCTTGTTTTCTATTC +
Preference number: 2 (lower is better)
Translates to: PTLLSALSPSPYFGILPGAGPDS*CSCFLF
Trigger: GAATAGAAAACAAGAGCAGCAGCTGTCAGGCCCAGC...TCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp ATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTACTTGGCGGAGGAGCTaGTGGTCACATTGGCTATAT +
Preference number: 2 (lower is better)
Translates to: IPPPETPSLPHLPGDRLPTWRRS*WSHWLY
Trigger: ATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGT...AGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGATTTCTCCCTTCACCCTaGAGCTCTCAAGTAACAACC +
Preference number: 2 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRFLPSP*SSQVTT
Trigger: GGTTGTTACTTGAGAGCTCCAGGGTGAAGGGAGAAA...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp TATGAGAACATGGCCTCACCACGGGGCCAGCGCTCAGATTCCTGCCCTGCCGATTTCTGGCTGCAGGCCTaGTCTAGAGTCGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: YENMASPRGQRSDSCPADFWLQA*SRVAAS
Trigger: AGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAA...ATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAGGCCATGTTCTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp ACAGCCCCGCGTCGGGGCTGTGGTCACAGTAAAGCAAGGCGATCTTCGCACACATTCTGGCTGCAGGCCTaGTCTAGAGTCGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: TAPRRGCGHSKARRSSHTFWLQA*SRVAAS
Trigger: AGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAA...TGTGTGCGAAGATCGCCTTGCTTTACTGTGACCACAGCCCCGACGCGGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCAGCTGCTGGTCACATTaGCTATATATTCTTGGGCTT +
Preference number: 2 (lower is better)
Translates to: HPCPTSQVTDSLAWPCPSSCWSH*LYILGL
Trigger: AAGCCCAAGAATATATAGCCAATGTGACCAGCAGCT...GCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR TCA 90 bp CCAAGAGCCGCGGCCGGGGTAACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTACGAGCCGAACTCCTCTaGAGAGTATGGCAGACCTTT +
Preference number: 2 (lower is better)
Translates to: PRAAAGVTETPAALKFLLRAELL*RVWQTF
Trigger: AAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCG...TAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTTACCCCGGCCGCGGCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp CCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCGAGCCGAACTCCTCTaGAGAGTATGGCAGACCTTT +
Preference number: 2 (lower is better)
Translates to: PSPRFCQHNRAESGLSPWRAELL*RVWQTF
Trigger: AAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCG...CCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp AGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCACTCAACAGAAACGCCGGCTaGGCTGAAGTTCTTGTTAAA +
Preference number: 2 (lower is better)
Translates to: SPSPYFGILPGGCAGCSLNRNAG*AEVLVK
Trigger: TTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT...GAGTGAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp GAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCGTGGAATTTCCTGTTTaGTCCCCCTCTCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: ESAFWLQAWSRVAASVRSVEFPV*SPSPAC
Trigger: GCAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCAC...GCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp TGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGCCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: CQDETESQGKCEFSTAGLPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...CAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp TCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCAACAGGGCAGAGTCTaGGCTATCACCCTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: SPFLPAQQGRVWAITLASQQGRV*AITLAS
Trigger: AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTG...AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAAAGACTAGAGAGGGGTaGTTAATGTTTCTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRKTREG*LMFLEA
Trigger: TGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTT...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp TTGGTGACAGCAGTGAGCAAGGCCCGGCTCAGGCGGCAGCCAACACCCATGCGGGTCACCAATTCAGACTaGTCTTCTCCTTTCAACCAG +
Preference number: 2 (lower is better)
Translates to: LVTAVSKARLRRQPTPMRVTNSD*SSPFNQ
Trigger: CTGGTTGAAAGGAGAAGACCAGTCTGAATTGGTGAC...CCGCATGGGTGTTGGCTGCCGCCTGAGCCGGGCCTTGCTCACTGCTGTCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CAA 90 bp CAGCCAACACCCATGCGGGGGTGGGCAGATTCCAGGCAGACCACCTaGTCCACAGTCGTCACCAATTCAGACTGGTCTTCTCCTTTCAAC +
Preference number: 2 (lower is better)
Translates to: QPTPMRGWADSRQTT*STVVTNSDWSSPFN
Trigger: GTTGAAAGGAGAAGACCAGTCTGAATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGGAATCTGCCCACCCCCGCATGGGTGTTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR GCA 90 bp CCAAGAGCCGCGGCCGGGGTAACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTAAAGCCCACATTTTCCTaGGAGCCGAACTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: PRAAAGVTETPAALKFLLKPTFS*EPNSSE
Trigger: TTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTT...TAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTTACCCCGGCCGCGGCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CTGAAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAACACCATCCCAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGA +
Preference number: 2 (lower is better)
Translates to: LKAHGPSCSPSRHPKHHPSMADL*NRVRTR
Trigger: TCTCGTCCTGACACGATTCCAAAGGTCTGCCATACT...GGGATGGTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGATCACCATCTCATACATaGCTTGTTCCTCCTCTTCTA +
Preference number: 2 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRSPSHT*LVPPLL
Trigger: TAGAAGAGGAGGAACAAGCCATGTATGAGATGGTGA...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR GCA 90 bp TTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTAAGCCCACATTTTCCTaGGAGCCGAACTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: FSPFLPAQQGRVWAITLAKPTFS*EPNSSE
Trigger: TTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTT...AGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp GAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCAATCGGCGTTCTGGCTaGAGGCCTGGTCTAGAGTCG +
Preference number: 2 (lower is better)
Translates to: EGWLMFLEAAVEFPVCSPNRRSG*RPGLES
Trigger: CGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATT...GGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp CCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTAACAGAAACGCCGGCTaGGCTGAAGTTCTTGTTAAA +
Preference number: 2 (lower is better)
Translates to: PAADEDTRGRLAGEASRTNRNAG*AEVLVK
Trigger: TTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT...AGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp ATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGCCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: MADLWNRVRTRLKVKASVPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...CACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp AAAACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTAAGTCAAGGCAAGTGTaGATTCAGCACCGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: KTQPFSPFLPAQQGRVWAKSRQV*IQHRRP
Trigger: AGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTT...AGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp ACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCAAGCCCACATTTTCCTaGGAGCCGAACTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: TQPFSPFLPAQQGRVWAIKPTFS*EPNSSE
Trigger: TTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTT...GATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp AGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTGGCACAGACTCCCTGGCGTaGCCATGCCCCAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: SSFSPDTEACCGVSYFSGTDSLA*PCPSPP
Trigger: TGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGT...GCCAGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp TCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACTTTCTCCCTTCACCCTaGAGCTCTCAAGTAACAACC +
Preference number: 2 (lower is better)
Translates to: SAFWLQAWSRVAASVRSNFLPSP*SSQVTT
Trigger: GGTTGTTACTTGAGAGCTCCAGGGTGAAGGGAGAAA...GTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp GGCTGCCCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCTCAAATGAGGGAGACTaGAGCTTTATTAAGGAAACA +
Preference number: 2 (lower is better)
Translates to: GCPTLLSALSPSPYFGILSNEGD*SFIKET
Trigger: TGTTTCCTTAATAAAGCTCCAGTCTCCCTCATTTGA...GAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGATCTTATTTTTCTGGCTaGAGCCTGATTATGAGAACA +
Preference number: 2 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRSYFSG*SLIMRT
Trigger: TGTTCTCATAATCAGGCTCCAGCCAGAAAAATAAGA...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp GCCGGCTGCGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGGGCTGTGGTCACACTTGTTTTCTATTCATaGAAACTCAACCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: AGCAEVLVKQPRVGAVVTLVFYS*KLNPSP
Trigger: GGGAGAAGGGTTGAGTTTTCATGAATAGAAAACAAG...TGTGACCACAGCCCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTTAATAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGA +
Preference number: 2 (lower is better)
Translates to: PQMRTHGEDSLERLLALNSMADL*NRVRTR
Trigger: TCTCGTCCTGACACGATTCCAAAGGTCTGCCATACT...ATTAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp GCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTTGGCGGAGGAGCTGCTaGTCACATTGGCTATATATT +
Preference number: 2 (lower is better)
Translates to: AFWLQAWSRVAASVRSNTWRRSC*SHWLYI
Trigger: AATATATAGCCAATGTGACCAGCAGCTCCTCCGCCA...AGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CCA 90 bp TCACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCAAGAGCCGAGCATGCTaGGGAGCAGCAGGAGTGGGA +
Preference number: 2 (lower is better)
Translates to: SPLPVFSLQRCGIVLSYVKSRAC*GAAGVG
Trigger: TCCCACTCCTGCTGCTCCCCAGCATGCTCGGCTCTT...GACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR-3UTR TCA 90 bp ACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCGAGTCGCAGCTTCTGTaGGAAGCAACACTGAGGCGG +
Preference number: 2 (lower is better)
Translates to: TREGWLMFLEAAVEFPVCESQLL*EATLRR
Trigger: CCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTC...GCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp AATACCAGTAAGACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTCGCACACAGCAAGTaGGAGGCTCTGGGCCCTGAC +
Preference number: 2 (lower is better)
Translates to: NTSKTREGWLMFLEAAVEFAHSK*EALGPD
Trigger: GTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAA...TTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTTACTGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp GAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCTTCTGGCTGCAGGCCTaGTCTAGAGTCGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: EEYGRPLESCQDETESQGFWLQA*SRVAAS
Trigger: AGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAA...GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp AACCCCCTGAAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAACACTTGGCTATATATTCTTaGGCTTCCATAACAGGAATG +
Preference number: 2 (lower is better)
Translates to: NPLKAHGPSCSPSRHPKHLAIYS*ASITGM
Trigger: CATTCCTGTTATGGAAGCCCAAGAATATATAGCCAA...GTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAGGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CAA 90 bp ACGTCCTTGTTACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTaGGCGGAGGAGCTGCTGGTCACATTGGCTATATATTCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: TSLLLLSIQVSAASN*AEELLVTLAIYSWA
Trigger: AGCCCAAGAATATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR TCA 90 bp TCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACCTTGTTTTCTATTCATaGAAACTCAACCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: SAFWLQAWSRVAASVRSNLVFYS*KLNPSP
Trigger: GGGAGAAGGGTTGAGTTTTCATGAATAGAAAACAAG...GTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp AATACCAGTAAGACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAACCTTCTCCCCGTTTCTaGCAGCACAACAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: NTSKTREGWLMFLEAAVEPSPRF*QHNRAE
Trigger: CTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGG...TTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTTACTGGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR GCA 90 bp CACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTATAAAGAGCCGAGCATaGTGGGGAGCAGCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: HHCQCSLYRGVGLCFHMSIKSRA*WGAAGV
Trigger: CACTCCTGCTGCTCCCCAGCATGCTCGGCTCTTTAT...AGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR-3UTR TCA 90 bp ACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTTTGCACTGCCCTCAGCTaGCATCTGATGCAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: TTASVLSTEVWDCAFICLCTALS*HLMQGS
Trigger: AGAGCCTTGCATCAGATGTCAGCTGAGGGCAGTGCA...AAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR-3UTR CCA 90 bp GGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTCAAGACTAGAGAGGGGTaGTTAATGTTTCTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: GVVNVSGGSCGISCLLPLKTREG*LMFLEA
Trigger: TGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTT...GAGGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTTTTTTCTGGGGAGCTCAGTaGGGTCGGACCCCATCTTAC +
Preference number: 2 (lower is better)
Translates to: HCQCSLYRGVGLCFHMSFFWGAQ*GRTPSY
Trigger: GTAAGATGGGGTCCGACCCCACTGAGCTCCCCAGAA...AAAAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR CAA 90 bp ACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAA +
Preference number: 2 (lower is better)
Translates to: TFSCEPNSSEEYGRP*ESCQDETESQGKCE
Trigger: TTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CATCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTGATTATGAGAACATaGCCTCACCACGGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: HPAVSALILKPVAVFLIFLIMRT*PHHGAS
Trigger: GCTGGCCCCGTGGTGAGGCCATGTTCTCATAATCAG...AAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp TCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTAAGTCAAGGCAAGTGTaGATTCAGCACCGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: SSSFSPDTEACCGVSYFSKSRQV*IQHRRP
Trigger: AGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTT...AGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CCA 90 bp CCAGGCAGACCACCTTGTCCACAGTCGTCACCAATTCAGACTGGTCTTCTCCTTAATTACCAGCTTGGATaGCCAGGAAATTGTAGAGTT +
Preference number: 2 (lower is better)
Translates to: PGRPPCPQSSPIQTGLLLNYQLG*PGNCRV
Trigger: AACTCTACAATTTCCTGGCCATCCAAGCTGGTAATT...AAGGAGAAGACCAGTCTGAATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CAA 90 bp AACTGGTATCACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATaGTGCTTTCATATGTCTTTTCTAGCTCATCCTGCCATAAAGAGC +
Preference number: 2 (lower is better)
Translates to: NWYHHCQCSLYRGVG*CFHMSFLAHPAIKS
Trigger: GCTCTTTATGGCAGGATGAGCTAGAAAAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGTGATACCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR-3UTR TCA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCCTTGTTTTCTATTCATaGAAACTCAACCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGLVFYS*KLNPSP
Trigger: GGGAGAAGGGTTGAGTTTTCATGAATAGAAAACAAG...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp TCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTAGAGTATTGCTCAAATaGGGGAGACTGGAGCTTTAT +
Preference number: 2 (lower is better)
Translates to: SSSFSPDTEACCGVSYFSRVLLK*GRLELY
Trigger: ATAAAGCTCCAGTCTCCCTCATTTGAGCAATACTCT...AGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR TCA 90 bp TCTATAATCTTCTTCACCATCTCATACATGGCTTGTTCCTCCTCTTCTAACTTTGCCTTCTGCTTGGCCTaGCAGAACTCATCTGTTTTT +
Preference number: 2 (lower is better)
Translates to: SIIFFTISYMACSSSSNFAFCLA*QNSSVF
Trigger: AAAAACAGATGAGTTCTGTCAGGCCAAGCAGAAGGC...AAAGTTAGAAGAGGAGGAACAAGCCATGTATGAGATGGTGAAGAAGATTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CAA 90 bp GTCACATTGGCTATATATTCTTGGGCTTCCATAACAGGAATGCATTaGCTTTTTAGATTCTCTGGATTTCCACACTCAAAATTACCAGCT +
Preference number: 2 (lower is better)
Translates to: VTLAIYSWASITGMH*LFRFSGFPHSKLPA
Trigger: AGCTGGTAATTTTGAGTGTGGAAATCCAGAGAATCTAAAAAGCAAATGCATTCCTGTTATGGAAGCCCAAGAATATATAGCCAATGTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR GCA 72 bp GGCCCGCCCGCCCTGGGGCTGCCCGACCCTCCTCTCTaGTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCC +
Preference number: 3 (lower is better)
Translates to: GPPALGLPDPPL*SQPQSLLRDPP
Trigger: GGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGGGCAGCCCCAGGGCGGGCGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CAA 90 bp CCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTGCGGACGCTGCTCCCTaGTGGCCGGCAGGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: PAADEDTRGRLAGEASRTADAAP*WPAGGS
Trigger: GCTGCCCCCTGCCGGCCACAAGGGAGCAGCGTCCGC...AGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
3UTR TCA 72 bp GCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTaGCAGACTCCCTGGCGTGGCCATGCCCCAGCCCAC +
Preference number: 3 (lower is better)
Translates to: ATRNTIPAPPPR*QTPWRGHAPAH
Trigger: GTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR CCA 72 bp GCCCGGCTCAGGCGGCAGCCAACACCCATGCGGGGGTaGGCAGATTCCAGGCAGACCACCTTGTCCACAGTC +
Preference number: 3 (lower is better)
Translates to: ARLRRQPTPMRG*ADSRQTTLSTV
Trigger: GACTGTGGACAAGGTGGTCTGCCTGGAATCTGCCCACCCCCGCATGGGTGTTGGCTGCCGCCTGAGCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CAA 90 bp CCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCCCACCAGCCGCTGCGCTGAAGTTCTaGTTAAACAGCCCCGCGTCG +
Preference number: 3 (lower is better)
Translates to: PTSQVTDSLAWPCPSPPAAALKF*LNSPAS
Trigger: CGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGC...GGCTGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CAA 90 bp CTGAGGCGGGCCCGCCCGCCCTGGGGCTGCCCGACCCTCCTCTCTGCTCTCAGCAAGAAGATGAGCACGTaGGTGACAGCAGTGAGCAAG +
Preference number: 3 (lower is better)
Translates to: LRRARPPWGCPTLLSALSKKMST*VTAVSK
Trigger: CTTGCTCACTGCTGTCACCAACGTGCTCATCTTCTT...GCTGAGAGCAGAGAGGAGGGTCGGGCAGCCCCAGGGCGGGCGGGCCCGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR TCA 72 bp TCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTaGGAAGCAACACTGAGGCGGGCCCGCCCGCCCTGG +
Preference number: 3 (lower is better)
Translates to: SGCRPGLESQLL*EATLRRARPPW
Trigger: CCAGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR TCA 72 bp GATCTTCGCACACAGCAAGTGCGAGGCTCTGGGCCCTaGCGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTC +
Preference number: 3 (lower is better)
Translates to: DLRTQQVRGSGP*RRAPKLPESAF
Trigger: GAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAAGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR GCA 72 bp GCCAAGAGCCGCGGCCGGGGTAACAGAAACGCCGGCTaGGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGG +
Preference number: 3 (lower is better)
Translates to: AKSRGRGNRNAG*AEVLVKQPRVG
Trigger: CCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTTACCCCGGCCGCGGCTCTTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR TCA 72 bp CCAGGAGGCTGTGCCGGCTGCTCACTCCTCCTGACCTaGGGGACCGTGTGTCTGGGCCTGGTGTTTCTAGAC +
Preference number: 3 (lower is better)
Translates to: PGGCAGCSLLLT*GTVCLGLVFLD
Trigger: GTCTAGAAACACCAGGCCCAGACACACGGTCCCTCAGGTCAGGAGGAGTGAGCAGCCGGCACAGCCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR CCA 72 bp CAACGCGGTGGGACTCCGTCTGGATCCGGGATTCGTTaGAGGCCAGGAACTCCACAGCTCGGTCCCAGACAC +
Preference number: 3 (lower is better)
Translates to: QRGGTPSGSGIR*RPGTPQLGPRH
Trigger: GTGTCTGGGACCGAGCTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCACCGCGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CAA 90 bp CCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCTCCAGGCAGACCACCTaGTCCACAGTCGTCACCAAT +
Preference number: 3 (lower is better)
Translates to: PIPPPETPSLPHLPGDRLSRQTT*STVVTN
Trigger: ATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGGA...GAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 72 bp CATCTCCACACCAGCATGTCCTCTCCTGCAACGCGGTaGGACTCCGTCTGGATCCGGGATTCGTTGGAGGCC +
Preference number: 3 (lower is better)
Translates to: HLHTSMSSPATR*DSVWIRDSLEA
Trigger: GGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTGGTGTGGAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 72 bp GATGCAAGGCTCTGGGTTTCCTTCTGGGGAGCTCAGTaGGGTCGGACCCCATCTTACCTCACACCCAGCGCC +
Preference number: 3 (lower is better)
Translates to: DARLWVSFWGAQ*GRTPSYLTPSA
Trigger: GGCGCTGGGTGTGAGGTAAGATGGGGTCCGACCCCACTGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR-3UTR CAA 90 bp TCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAG +
Preference number: 3 (lower is better)
Translates to: SQPQSLLRDPPRRLCRLLEYGRP*ESCQDE
Trigger: CTCGTCCTGACACGATTCCAAAGGTCTGCCATACTC...GAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR TCA 72 bp TTTCCTGTTTGCTCCCCCTCTCCTGCCTGCCGCAGATaGGGACACACGGGGAAGACTCGCTGGAGAGGCTTC +
Preference number: 3 (lower is better)
Translates to: FPVCSPSPACRR*GHTGKTRWRGF
Trigger: GAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAGAGGGGGAGCAAACAGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR GCA 72 bp GGGCTTAGTCCATCTCCACACCAGCATGTCCTCTCCTaGAACGCGGTGGGACTCCGTCTGGATCCGGGATTC +
Preference number: 3 (lower is better)
Translates to: GLSPSPHQHVLS*NAVGLRLDPGF
Trigger: GAATCCCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTGGTGTGGAGATGGACTAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR GCA 72 bp TGGGAGCAGAGCCACTCTTGGCCCTGGGGTCTGCACTaGCCTCAGCTGACATCTGATGCAAGGCTCTGGGTT +
Preference number: 3 (lower is better)
Translates to: WEQSHSWPWGLH*PQLTSDARLWV
Trigger: AACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCAGTGCAGACCCCAGGGCCAAGAGTGGCTCTGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR CCA 72 bp AGCATGTCCTCTCCTGCAACGCGGTGGGACTCCGTCTaGATCCGGGATTCGTTGGAGGCCAGGAACTCCACA +
Preference number: 3 (lower is better)
Translates to: SMSSPATRWDSV*IRDSLEARNST
Trigger: TGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CAA 90 bp CCTCTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAG +
Preference number: 3 (lower is better)
Translates to: PLLPAADEDTRGRLAGEAEYGRP*ESCQDE
Trigger: CTCGTCCTGACACGATTCCAAAGGTCTGCCATACTC...AGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR TCA 72 bp TTGGCCCTGGGGTCTGCACTGCCCTCAGCTGACATCTaGTGCAAGGCTCTGGGTTTCCTTCTGGGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: LALGSALPSADI*CKALGFLLGSS
Trigger: TGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCAGTGCAGACCCCAGGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR GCA 72 bp TCAAGTAACAACCCCCTGAAGGCACATGGACCAAGCTaGTCCCCATCCCGCCACCCGAAACACCATCCCTGC +
Preference number: 3 (lower is better)
Translates to: SSNNPLKAHGPS*SPSRHPKHHPC
Trigger: GCAGGGATGGTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAGGGGGTTGTTACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CAA 90 bp TATGAGAACATGGCCTCACCACGGGGCCAGCGCTCAGATTCCTGCCCTGCCGATTGTGGAATTTCCTGTTaGCTCCCCCTCTCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: YENMASPRGQRSDSCPADCGISC*LPLSCL
Trigger: CAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCACA...ATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAGGCCATGTTCTCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CAA 90 bp CACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGGAGCTGCTGGTCACATaGGCTATATATTCTTGGGCT +
Preference number: 3 (lower is better)
Translates to: HPKHHPCPTSQVTDSLAWELLVT*AIYSWA
Trigger: AGCCCAAGAATATATAGCCAATGTGACCAGCAGCTC...CCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CAA 90 bp ACAGCCCCGCGTCGGGGCTGTGGTCACAGTAAAGCAAGGCGATCTTCGCACACAGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAG +
Preference number: 3 (lower is better)
Translates to: TAPRRGCGHSKARRSSHTEYGRP*ESCQDE
Trigger: CTCGTCCTGACACGATTCCAAAGGTCTGCCATACTC...TGTGTGCGAAGATCGCCTTGCTTTACTGTGACCACAGCCCCGACGCGGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR-3UTR CAA 90 bp CCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAG +
Preference number: 3 (lower is better)
Translates to: PVSASTTGQSLGYHPGFSEYGRP*ESCQDE
Trigger: CTCGTCCTGACACGATTCCAAAGGTCTGCCATACTC...GGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR GCA 72 bp GCCCACGTCCTTGTTACTGCTCAGTATCCAGGTCAGTaGGGCTTCAAACTTGGCGGAGGAGCTGCTGGTCAC +
Preference number: 3 (lower is better)
Translates to: AHVLVTAQYPGQ*GFKLGGGAAGH
Trigger: GTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR GCA 72 bp TCTGTGGAGGGATCAAGCTGTCGCGCACGTGCAGGATaGCTACATATGGATAGCGCTCCATGTCCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: SVEGSSCRARAG*LHMDSAPCPAP
Trigger: GGGAGCAGGACATGGAGCGCTATCCATATGTAGGCATCCTGCACGTGCGCGACAGCTTGATCCCTCCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 72 bp CAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTaGGGAGCTCAGTGGGGTCGGACCCCATCTTACCTC +
Preference number: 3 (lower is better)
Translates to: QLTSDARLWVSF*GAQWGRTPSYL
Trigger: GAGGTAAGATGGGGTCCGACCCCACTGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR CCA 72 bp TTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTaGGCTATCACCCTGGCTTCTCCCCCTCCCTTTAAA +
Preference number: 3 (lower is better)
Translates to: FSPFLPAQQGRV*AITLASPPPFK
Trigger: TTTAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR CCA 72 bp GATCAAGCTGTCGCGCACGTGCAGGATGCCTACATATaGATAGCGCTCCATGTCCTGCTCCCAGTCCACGTA +
Preference number: 3 (lower is better)
Translates to: DQAVAHVQDAYI*IALHVLLPVHV
Trigger: TACGTGGACTGGGAGCAGGACATGGAGCGCTATCCATATGTAGGCATCCTGCACGTGCGCGACAGCTTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CAA 90 bp AACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAG +
Preference number: 3 (lower is better)
Translates to: NSTLLPVSASTTGQSLGYEYGRP*ESCQDE
Trigger: CTCGTCCTGACACGATTCCAAAGGTCTGCCATACTC...ATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR GCA 72 bp TCCAGGTCAGTGCGGCTTCAAACTTGGCGGAGGAGCTaGTGGTCACATTGGCTATATATTCTTGGGCTTCCA +
Preference number: 3 (lower is better)
Translates to: SRSVRLQTWRRS*WSHWLYILGLP
Trigger: TGGAAGCCCAAGAATATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 72 bp GCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCA +
Preference number: 3 (lower is better)
Translates to: ASRTPLKSMADL*NRVRTRLKVKA
Trigger: TGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR CCA 72 bp CAGACCACCTTGTCCACAGTCGTCACCAATTCAGACTaGTCTTCTCCTTTCAACCAGATGCCCACGTCCTTG +
Preference number: 3 (lower is better)
Translates to: QTTLSTVVTNSD*SSPFNQMPTSL
Trigger: CAAGGACGTGGGCATCTGGTTGAAAGGAGAAGACCAGTCTGAATTGGTGACGACTGTGGACAAGGTGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 72 bp GGAGCTGCTATTACTTGGAGCCCAAGGCCTCCTAACTaGTATCACCACTGCCAGTGTTCTCTCTACAGAGGT +
Preference number: 3 (lower is better)
Translates to: GAAITWSPRPPN*YHHCQCSLYRG
Trigger: ACCTCTGTAGAGAGAACACTGGCAGTGGTGATACCAGTTAGGAGGCCTTGGGCTCCAAGTAATAGCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR-3UTR CAA 90 bp CCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTATTGGCTATATATTCTaGGGCTTCCATAACAGGAAT +
Preference number: 3 (lower is better)
Translates to: PAADEDTRGRLAGEASRTIGYIF*GFHNRN
Trigger: ATTCCTGTTATGGAAGCCCAAGAATATATAGCCAAT...AGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR GCA 72 bp CTTCTCCTTTCAACCAGATGCCCACGTCCTTGTTACTaGTCAGTATCCAGGTCAGTGCGGCTTCAAACTTGG +
Preference number: 3 (lower is better)
Translates to: LLLSTRCPRPCY*SVSRSVRLQTW
Trigger: CCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTTGAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR CCA 72 bp TACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTTaGCGGAGGAGCTGCTGGTCACATTGGCTATATATT +
Preference number: 3 (lower is better)
Translates to: YCSVSRSVRLQT*RRSCWSHWLYI
Trigger: AATATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CAA 90 bp GAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCCTCAAAATTACCAGCTaGGATGGCCAGGAAATTGTA +
Preference number: 3 (lower is better)
Translates to: EGWLMFLEAAVEFPVCSPLKITS*DGQEIV
Trigger: TACAATTTCCTGGCCATCCAAGCTGGTAATTTTGAG...GGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR-3UTR CAA 90 bp AATACCAGTAAGACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAACAGATGCCCACGTCCTaGTTACTGCTCAGTATCCAG +
Preference number: 3 (lower is better)
Translates to: NTSKTREGWLMFLEAAVEQMPTS*LLLSIQ
Trigger: CTGGATACTGAGCAGTAACAAGGACGTGGGCATCTG...TTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTTACTGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421671.6
3UTR TCA 72 bp TTCCTGCCCTGCCGATCATCCAGACATCAGAGGAAATaGGAGTATTGCTCAAATGAGGGAGACTGGAGCTTT +
Preference number: 3 (lower is better)
Translates to: FLPCRSSRHQRK*EYCSNEGDWSF
Trigger: AAAGCTCCAGTCTCCCTCATTTGAGCAATACTCTCATTTCCTCTGATGTCTGGATGATCGGCAGGGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR GCA 72 bp CACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTaGTTTCATATGTCTTTTCTAGCTCATCCTGCCATA +
Preference number: 3 (lower is better)
Translates to: HCQCSLYRGVGL*FHMSFLAHPAI
Trigger: TATGGCAGGATGAGCTAGAAAAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR GCA 90 bp ACTGCGCCTCTCCCGCCGCCAAGAGCCGCGGCCGGGGTAACAGAAACGCCGGCTCGGCAGGGGGCAGCCTaGAGCCACTGCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TAPLPPPRAAAGVTETPARQGAA*SHCASP
Trigger: GGGAGAGGCGCAGTGGCTGCAGGCTGCCCCCTGCCG...AGCCGGCGTTTCTGTTACCCCGGCCGCGGCTCTTGGCGGCGGGAGAGGCGCAGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
CDS-3UTR GCA 90 bp CTGAGGCGGGCCCGCCCGCCCTGGGGCTGCCCGACCCTCCTCTCTGCTCTCAGCTTGCTCCCCCTCTCCTaGCTGCCGCAGATGAGGACA +
Preference number: 4 (lower is better)
Translates to: LRRARPPWGCPTLLSALSLLPLS*LPQMRT
Trigger: TGTCCTCATCTGCGGCAGGCAGGAGAGGGGGAGCAA...GCTGAGAGCAGAGAGGAGGGTCGGGCAGCCCCAGGGCGGGCGGGCCCGCCTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCCCACCAGCCGCACATGGACCAAGCTaGTCCCCATCCCGCCACCCG +
Preference number: 4 (lower is better)
Translates to: PTSQVTDSLAWPCPSPPAAHGPS*SPSRHP
Trigger: CGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGC...GGCTGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCCCACCAGCCTGGAGTGGGCTGTCCTaGGACAGGCTGACCGGGAAC +
Preference number: 4 (lower is better)
Translates to: PTSQVTDSLAWPCPSPPAWSGLS*DRLTGN
Trigger: GTTCCCGGTCAGCCTGTCCCAGGACAGCCCACTCCA...GGCTGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCGCACCGCAGGCCTGGTaGCCCTCCTGTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PIPPPETPSLPHLPGDRLAPQAW*PSCASG
Trigger: TCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGC...GAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp AAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCGCCCCACCTCCCAGGTaGCAGACTCCCTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: KHHPCPTSQVTDSLAWPCAPPPR*QTPWRG
Trigger: GCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGC...GCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGATGGAAGCCCAGGGCCTaGAGCTCCCGCCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRWKPRA*SSRRSS
Trigger: GGAACTGCGGCGGGAGCTGCAGGCCCTGGGCTTCCA...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp CTCACCACGGGGCCAGCGCTCAGATTCCTGCCCTGCCGATCATCCAGACATCAGCGGCAGGGGGCAGCCTaGAGCCACTGCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LTTGPALRFLPCRSSRHQRQGAA*SHCASP
Trigger: GGGAGAGGCGCAGTGGCTGCAGGCTGCCCCCTGCCG...CTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000506578.5
CDS-3UTR CCA 90 bp GGCTGCCCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCGCAAGTGCGAGGCTCTaGGCCCTGACGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GCPTLLSALSPSPYFGILASARL*ALTQGS
Trigger: GGAGCCCTGCGTCAGGGCCCAGAGCCTCGCACTTGC...GAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCGCAAGTGCGAGGCTCTaGGCCCTGACGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SQPQSLLRDPPRRLCRLLASARL*ALTQGS
Trigger: GGAGCCCTGCGTCAGGGCCCAGAGCCTCGCACTTGC...GAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCTGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PIPPPETPSLPHLPGDRLCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...GAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGTGGAAGCCCAGGGCCTaGAGCTCCCGCCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LPSSRNRRSGCRPGLESQWKPRA*SSRRSS
Trigger: GGAACTGCGGCGGGAGCTGCAGGCCCTGGGCTTCCA...CTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp CACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGGGCGGCGCAGCTTGTTaGGGTAGACATCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: HPKHHPCPTSQVTDSLAWGGAAC*GRHPGW
Trigger: CCACCCGGGATGTCTACCGCAACAAGCTGCGCCGCC...CCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp TCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCGCACATGGACCAAGCTaGTCCCCATCCCGCCACCCG +
Preference number: 4 (lower is better)
Translates to: SQPQSLLRDPPRRLCRLLAHGPS*SPSRHP
Trigger: CGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGC...GAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CCAAGAGCCGCGGCCGGGGTAACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTACGGCAGGGGGCAGCCTaGAGCCACTGCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PRAAAGVTETPAALKFLLRQGAA*SHCASP
Trigger: GGGAGAGGCGCAGTGGCTGCAGGCTGCCCCCTGCCG...TAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTTACCCCGGCCGCGGCTCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
CDS-3UTR GCA 90 bp CCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCCCACCAGCCCAGCGCTCAGATTCCTaGCCTGCCGATCATCCAGAC +
Preference number: 4 (lower is better)
Translates to: PTSQVTDSLAWPCPSPPAQRSDS*PADHPD
Trigger: GTCTGGATGATCGGCAGGGCAGGAATCTGAGCGCTG...GGCTGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GGCTGCCCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCGTCGGTGATGGGTCCTaGCTGGAAGCCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GCPTLLSALSPSPYFGILVGDGS*LEAQGL
Trigger: CAGGCCCTGGGCTTCCAGCCAGGACCCATCACCGAC...GAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGGGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCACAGACTCCCTGGCGTaGCCATGCCCCAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PIPPPETPSLPHLPGDRLTDSLA*PCPSPP
Trigger: TGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGT...GAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGCAAGTGCGAGGCTCTaGGCCCTGACGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTLLSALSPSPYFGILPGASARL*ALTQGS
Trigger: GGAGCCCTGCGTCAGGGCCCAGAGCCTCGCACTTGC...TCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGACCGTCGGGGTGCTTCTaGAGCCTGCCTCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PTLLSALSPSPYFGILPGPSGCF*SLPPRE
Trigger: CTCCCTGGGAGGCAGGCTCCAGAAGCACCCCGACGG...TCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCCGTCGGGGTGCTTCTaGAGCCTGCCTCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPSSRNRRSGCRPGLESQPSGCF*SLPPRE
Trigger: CTCCCTGGGAGGCAGGCTCCAGAAGCACCCCGACGG...CTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTGAGGCGGGCCCGCCCGCCCTGGGGCTGCCCGACCCTCCTCTCTGCTCTCAGCTTCTGGAGGCAGCTGTaGAATTTCCTGTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LRRARPPWGCPTLLSALSFWRQL*NFLFAP
Trigger: GGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAA...GCTGAGAGCAGAGAGGAGGGTCGGGCAGCCCCAGGGCGGGCGGGCCCGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp AGTGGGCTGTCCTGGGACAGGCTGACCGGGAACAAGTCCCCGCCCGGGGCTTATTCACTCCTCCTGACCTaGGGGACCGTGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGLSWDRLTGNKSPPGAYSLLLT*GTVCLG
Trigger: GCCCAGACACACGGTCCCTCAGGTCAGGAGGAGTGA...ATAAGCCCCGGGCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACAGCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR GCA 90 bp TCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGAGGCGGGCCCGCCCGCCCTGGGCGGCGCAGCTTGTTaGGGTAGACATCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SRVAASVRSNTEAGPPALGGAAC*GRHPGW
Trigger: CCACCCGGGATGTCTACCGCAACAAGCTGCGCCGCC...CAGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp CATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCAATCGGCGTTCTGGCTaGAGGCCTGGTCTAGAGTCG +
Preference number: 4 (lower is better)
Translates to: HPCPTSQVTDSLAWPCPSNRRSG*RPGLES
Trigger: CGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATT...GCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGCGCCTCCGGCTCTGTaGAGGGATCAAGCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: IPPPETPSLPHLPGDRLPAPPAL*RDQAVA
Trigger: CGCGACAGCTTGATCCCTCCACAGAGCCGGAGGCGC...AGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGACCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGAGGCGGGCCCGCCCGCCCTGACAGACTCCCTGGCGTaGCCATGCCCCAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SRVAASVRSNTEAGPPALTDSLA*PCPSPP
Trigger: TGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGT...CAGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CTGAAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAACACCATCCCTGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LKAHGPSCSPSRHPKHHPCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...GGGATGGTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp ACAGCCCCGCGTCGGGGCTGTGGTCACAGTAAAGCAAGGCGATCTTCGCACACAGCACCGCAGGCCTGGTaGCCCTCCTGTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TAPRRGCGHSKARRSSHTAPQAW*PSCASG
Trigger: TCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGC...TGTGTGCGAAGATCGCCTTGCTTTACTGTGACCACAGCCCCGACGCGGGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCCCACCAGCCCGAGCCGAACTCCTCTaGAGAGTATGGCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: PTSQVTDSLAWPCPSPPARAELL*RVWQTF
Trigger: AAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCG...GGCTGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp GGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGAGTTGTGAGAAGCAACACTaGGGCGGGCCCGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GKCEFSTAGLVTLLCLWSCEKQH*GGPARP
Trigger: AGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACA...ACTCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp AGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCCGAGGCTCTGGGCCCTaGCGCAGGGCTCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SQGKCEFSTAGLVTLLCLRGSGP*RRAPKL
Trigger: GAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCTCG...GAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp AGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCACTCCTCCTGCCTGCCTGCCGCAGATaGGGACACACGGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: SPYFGILPGGCAGCSLLLPACRR*GHTGKT
Trigger: AGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGG...CAGGAGGAGTGAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCGCGGCGCTGAGGGCTTaGCCATCTTCACCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SQPQSLLRDPPRRLCRLLAALRA*PSSPKG
Trigger: TCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGC...GAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR GCA 90 bp CACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCAGCATGTCCTCTCCTaGAACGCGGTGGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: HPKHHPCPTSQVTDSLAWQHVLS*NAVGLR
Trigger: ACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTG...CCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGACAGCATGTCCTCTCCTaGAACGCGGTGGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRQHVLS*NAVGLR
Trigger: ACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTG...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GGCTGCCCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCAGCATGTCCTCTCCTaGAACGCGGTGGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: GCPTLLSALSPSPYFGILQHVLS*NAVGLR
Trigger: ACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTG...GAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTGCACATGGACCAAGCTaGTCCCCATCCCGCCACCCG +
Preference number: 4 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLAHGPS*SPSRHP
Trigger: CGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGC...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AGTGGGCTGTCCTGGGACAGGCTGACCGGGAACAAGTCCCCGCCCGGGGCTTATTTCGCACACAGCAAGTaGGAGGCTCTGGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SGLSWDRLTGNKSPPGAYFAHSK*EALGPD
Trigger: GTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAA...ATAAGCCCCGGGCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACAGCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR GCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGATTCGCACACAGCAAGTaGGAGGCTCTGGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRFAHSK*EALGPD
Trigger: GTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAA...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAACACCCATGCGGGGGTaGGCAGATTCCAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: PTLLSALSPSPYFGILPGTPMRG*ADSRQT
Trigger: GGTCTGCCTGGAATCTGCCCACCCCCGCATGGGTGT...TCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGACACCCATGCGGGGGTaGGCAGATTCCAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: LPSSRNRRSGCRPGLESQTPMRG*ADSRQT
Trigger: GGTCTGCCTGGAATCTGCCCACCCCCGCATGGGTGT...CTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CCAAGAGCCGCGGCCGGGGTAACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTACCGTCGGGGTGCTTCTaGAGCCTGCCTCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PRAAAGVTETPAALKFLLPSGCF*SLPPRE
Trigger: CTCCCTGGGAGGCAGGCTCCAGAAGCACCCCGACGG...TAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTTACCCCGGCCGCGGCTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR CAA 72 bp GCAACGCGGTGGGACTCCGTCTGGATCCGGGATTCGTaGGAGGCCAGGAACTCCACAGCTCGGTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: ATRWDSVWIRDS*EARNSTARSQT
Trigger: TGTCTGGGACCGAGCTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCACCGCGTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR TCA 90 bp CCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGTGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSPRFCQHNRAESGLSPWCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...CCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCTGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PRFCQHNRAESGLSPWLLCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...GAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTGCACCGCAGGCCTGGTaGCCCTCCTGTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FSPFLPAQQGRVWAITLAAPQAW*PSCASG
Trigger: TCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGC...AGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp ACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCGCCCCACCTCCCAGGTaGCAGACTCCCTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TQPFSPFLPAQQGRVWAIAPPPR*QTPWRG
Trigger: GCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGC...GATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACTGTGAGAAGCAACACTaGGGCGGGCCCGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: SAFWLQAWSRVAASVRSNCEKQH*GGPARP
Trigger: AGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACA...GTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TTGGTGACAGCAGTGAGCAAGGCCCGGCTCAGGCGGCAGCCAACACCCATGCGGGAGTCGCAGCTTCTGTaGGAAGCAACACTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LVTAVSKARLRRQPTPMRESQLL*EATLRR
Trigger: CCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTC...CCGCATGGGTGTTGGCTGCCGCCTGAGCCGGGCCTTGCTCACTGCTGTCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR TCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTCCTGCCTGCCGCAGATaGGGACACACGGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLPACRR*GHTGKT
Trigger: AGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGG...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGAAGCCCAGGGCCTaGAGCTCCCGCCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SQGKCEFSTAGLVTLLCLWKPRA*SSRRSS
Trigger: GGAACTGCGGCGGGAGCTGCAGGCCCTGGGCTTCCA...GAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp AGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCACTCAATCGGCGTTCTGGCTaGAGGCCTGGTCTAGAGTCG +
Preference number: 4 (lower is better)
Translates to: SPSPYFGILPGGCAGCSLNRRSG*RPGLES
Trigger: CGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATT...GAGTGAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ACAGCCCCGCGTCGGGGCTGTGGTCACAGTAAAGCAAGGCGATCTTCGCACACAGCGCCTCCGGCTCTGTaGAGGGATCAAGCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: TAPRRGCGHSKARRSSHTAPPAL*RDQAVA
Trigger: CGCGACAGCTTGATCCCTCCACAGAGCCGGAGGCGC...TGTGTGCGAAGATCGCCTTGCTTTACTGTGACCACAGCCCCGACGCGGGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp AACCCCCTGAAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAACACTCTCCTGCAACGCGGTaGGACTCCGTCTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: NPLKAHGPSCSPSRHPKHSPATR*DSVWIR
Trigger: CCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGA...GTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAGGGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCCGGCTGCGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGGGCTGTGGTCACACCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: AGCAEVLVKQPRVGAVVTPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...TGTGACCACAGCCCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTTAATTGTGAGAAGCAACACTaGGGCGGGCCCGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PQMRTHGEDSLERLLALNCEKQH*GGPARP
Trigger: AGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACA...ATTAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp AAAACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTCGAGGCTCTGGGCCCTaGCGCAGGGCTCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: KTQPFSPFLPAQQGRVWARGSGP*RRAPKL
Trigger: GAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCTCG...AGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp AACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCGAGGCTCTGGGCCCTaGCGCAGGGCTCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: NSTLLPVSASTTGQSLGYRGSGP*RRAPKL
Trigger: GAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCTCG...ATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTCCTGCCTGCCGCAGATaGGGACACACGGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: PAQQGRVWAITLASPPPFPACRR*GHTGKT
Trigger: AGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGG...AAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCTGCCTGCCGCAGATaGGGACACACGGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: PRFCQHNRAESGLSPWLLPACRR*GHTGKT
Trigger: AGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGG...GAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTAAATTGTCCTCCGCCTCCTaGGGCGCTGAGGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: AQQGRVWAITLASPPPFKLSSAS*GAEGLP
Trigger: GGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAA...TTTAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR GCA 90 bp TATGAGAACATGGCCTCACCACGGGGCCAGCGCTCAGATTCCTGCCCTGCCGATCCCAGACACGCTTCATaGGCCTCCGGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: YENMASPRGQRSDSCPADPRHAS*ASGSVE
Trigger: CTCCACAGAGCCGGAGGCGCATGAAGCGTGTCTGGG...ATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAGGCCATGTTCTCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR GCA 90 bp TCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGAGGCGGGCCCGCCCGCCCTGCCTTCTCCCCGTTTCTaGCAGCACAACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SRVAASVRSNTEAGPPALPSPRF*QHNRAE
Trigger: CTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGG...CAGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCGCACATGGACCAAGCTaGTCCCCATCCCGCCACCCG +
Preference number: 4 (lower is better)
Translates to: SQGKCEFSTAGLVTLLCLAHGPS*SPSRHP
Trigger: CGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGC...GAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp ATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTCAGCGCTCAGATTCCTaGCCTGCCGATCATCCAGAC +
Preference number: 4 (lower is better)
Translates to: IPPPETPSLPHLPGDRLPQRSDS*PADHPD
Trigger: GTCTGGATGATCGGCAGGGCAGGAATCTGAGCGCTG...AGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGGGATCCGGGATTCGTTaGAGGCCAGGAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: LPSSRNRRSGCRPGLESQGSGIR*RPGTPQ
Trigger: CTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCC...CTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTCGGTGGGACTCCGTCTaGATCCGGGATTCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLRWDSV*IRDSLE
Trigger: CTCCAACGAATCCCGGATCCAGACGGAGTCCCACCG...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACAGACTCCCTGGCGTaGCCATGCCCCAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SAFWLQAWSRVAASVRSNTDSLA*PCPSPP
Trigger: TGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGT...GTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAACGGGGAAGACTCGCTaGAGAGGCTTCTCGCACTTA +
Preference number: 4 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRTGKTR*RGFSHL
Trigger: TAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGT...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TGGCTTCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCCGCCTCCTGCGGCGCTaGGGGCTTGCCCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: WLLPLPLKEAHIFLRAELRLLRR*GLAHLH
Trigger: GTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCG...GAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR TCA 90 bp GGCTGCCCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCAAGTCAAGGCAAGTGTaGATTCAGCACCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GCPTLLSALSPSPYFGILKSRQV*IQHRRP
Trigger: AGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTT...GAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp GAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCTCACTCCTCCTGACCTaGGGGACCGTGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ESAFWLQAWSRVAASVRSSLLLT*GTVCLG
Trigger: GCCCAGACACACGGTCCCTCAGGTCAGGAGGAGTGA...GCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CTCCCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGAAAGCTGTCGCGCACGTaGAGGATGCCTACATATGGA +
Preference number: 4 (lower is better)
Translates to: LPIPPPETPSLPHLPGDRKLSRT*RMPTYG
Trigger: TCCATATGTAGGCATCCTGCACGTGCGCGACAGCTT...TCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCAGCATGTCCTCTCCTaGAACGCGGTGGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: PVSASTTGQSLGYHPGFSQHVLS*NAVGLR
Trigger: ACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTG...GGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AACCCCCTGAAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAACACAATCGGCGTTCTGGCTaGAGGCCTGGTCTAGAGTCG +
Preference number: 4 (lower is better)
Translates to: NPLKAHGPSCSPSRHPKHNRRSG*RPGLES
Trigger: CGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATT...GTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGTTGCTCCCCCTCTCCTaGCTGCCGCAGATGAGGACA +
Preference number: 4 (lower is better)
Translates to: QGKCEFSTAGLVTLLCLWLLPLS*LPQMRT
Trigger: TGTCCTCATCTGCGGCAGGCAGGAGAGGGGGAGCAA...CCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTGTGCGGCTTCAAACTTaGCGGAGGAGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLVRLQT*RRSCWS
Trigger: TGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCAC...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTACACCCATGCGGGGGTaGGCAGATTCCAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: SPFLPAQQGRVWAITLASTPMRG*ADSRQT
Trigger: GGTCTGCCTGGAATCTGCCCACCCCCGCATGGGTGT...AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: SPFLPAQQGRVWAITLASPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGATTCTGGCTGCAGGCCTaGTCTAGAGTCGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTLLSALSPSPYFGILPGFWLQA*SRVAAS
Trigger: AGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAA...TCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCACTCCTCCTGTTCTGGCTGCAGGCCTaGTCTAGAGTCGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPYFGILPGGCAGCSLLLFWLQA*SRVAAS
Trigger: AGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAA...CAGGAGGAGTGAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAAGCCCCACCTCCCAGGTaGCAGACTCCCTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PTFSCEPNSSEEYGRPLEAPPPR*QTPWRG
Trigger: GCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGC...TTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp AAAGCAAGGCGATCTTCGCACACAGCAAGTGCGAGGCTCTGGGCCCTGACGCAGGAGTCGCAGCTTCTGTaGGAAGCAACACTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KARRSSHTASARLWALTQESQLL*EATLRR
Trigger: CCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTC...CTGCGTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAAGATCGCCTTGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCCCACGTCCTTGTTACTaGTCAGTATCCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SQPQSLLRDPPRRLCRLLPRPCY*SVSRSV
Trigger: CACTGACCTGGATACTGAGCAGTAACAAGGACGTGG...GAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp TCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCAAGCCCACATTTTCCTaGGAGCCGAACTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SQPQSLLRDPPRRLCRLLKPTFS*EPNSSE
Trigger: TTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTT...GAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTCCTTCTCCCCGTTTCTaGCAGCACAACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PAQQGRVWAITLASPPPFPSPRF*QHNRAE
Trigger: CTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGG...AAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTATTCGCACACAGCAAGTaGGAGGCTCTGGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: QHNRAESGLSPWLLPLPLFAHSK*EALGPD
Trigger: GTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAA...TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTAAAGCAGTAGCCCTAGGCTaGCCCAGAGCAGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: AQQGRVWAITLASPPPFKAVALG*PRAEAE
Trigger: CTCGGCTTCTGCTCTGGGCCAGCCTAGGGCTACTGC...TTTAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCCCACCAGCCTCACCATCTCATACATaGCTTGTTCCTCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: PTSQVTDSLAWPCPSPPASPSHT*LVPPLL
Trigger: TAGAAGAGGAGGAACAAGCCATGTATGAGATGGTGA...GGCTGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTGGATCCGGGATTCGTTaGAGGCCAGGAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: PAQQGRVWAITLASPPPFGSGIR*RPGTPQ
Trigger: CTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCC...AAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCTCTCCTGCAACGCGGTaGGACTCCGTCTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: TQPFSPFLPAQQGRVWAISPATR*DSVWIR
Trigger: CCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGA...GATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACTCTCCTGCAACGCGGTaGGACTCCGTCTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: STLLPVSASTTGQSLGYHSPATR*DSVWIR
Trigger: CCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGA...GTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTTAATCCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: PQMRTHGEDSLERLLALNPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...ATTAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AGGCTCTGGGCCCTGACGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: RLWALTQGSQAPGIGVLASMADL*NRVRTR
Trigger: TCTCGTCCTGACACGATTCCAAAGGTCTGCCATACT...AGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AACCCCCTGAAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAACACCAACAGGGCAGAGTCTaGGCTATCACCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NPLKAHGPSCSPSRHPKHQQGRV*AITLAS
Trigger: AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTG...GTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCACCACGGGGCCAGCGCTCAGATTCCTGCCCTGCCGATCATCCAGACATCAGCAACAGGGCAGAGTCTaGGCTATCACCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTTGPALRFLPCRSSRHQQQGRV*AITLAS
Trigger: AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTG...CTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGCCGTCGGGGTGCTTCTaGAGCCTGCCTCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPHFPASRTPLKSMADLWPSGCF*SLPPRE
Trigger: CTCCCTGGGAGGCAGGCTCCAGAAGCACCCCGACGG...CCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCCGCCTCCTGCGGCGCTaGGGGCTTGCCCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: FPASRTPLKSMADLWNRVRLLRR*GLAHLH
Trigger: GTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCG...GACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR TCA 90 bp AAAACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTTCACTCCTCCTGACCTaGGGGACCGTGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KTQPFSPFLPAQQGRVWASLLLT*GTVCLG
Trigger: GCCCAGACACACGGTCCCTCAGGTCAGGAGGAGTGA...AGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp AACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGGGCTGAGTCGCAGCTTCTGTaGGAAGCAACACTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NRNAGCAEVLVKQPRVGAESQLL*EATLRR
Trigger: CCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTC...AGCCCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTCAGTATCCAGGTCAGTaGGGCTTCAAACTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: PAADEDTRGRLAGEASRTQYPGQ*GFKLGG
Trigger: TCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTG...AGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp TCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCTGCCCAGACACGCTTCATaGGCCTCCGGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SPPPFKGSPHFPASRTPLPRHAS*ASGSVE
Trigger: CTCCACAGAGCCGGAGGCGCATGAAGCGTGTCTGGG...CAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCCCAGACACGCTTCATaGGCCTCCGGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NSTLLPVSASTTGQSLGYPRHAS*ASGSVE
Trigger: CTCCACAGAGCCGGAGGCGCATGAAGCGTGTCTGGG...ATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp ACAGCCCCGCGTCGGGGCTGTGGTCACAGTAAAGCAAGGCGATCTTCGCACACAGTGGAATTTCCTGTTTaGTCCCCCTCTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TAPRRGCGHSKARRSSHTVEFPV*SPSPAC
Trigger: GCAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCAC...TGTGTGCGAAGATCGCCTTGCTTTACTGTGACCACAGCCCCGACGCGGGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTCTCAGATTCCTGCCCTaGCGATCATCCAGACATCAG +
Preference number: 4 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLLRFLP*RSSRHQ
Trigger: CTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAG...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTCGGTGATGGGTCCTaGCTGGAAGCCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CQDETESQGKCEFSTAGLVGDGS*LEAQGL
Trigger: CAGGCCCTGGGCTTCCAGCCAGGACCCATCACCGAC...CAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp AACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATGCAGTAGCCCTAGGCTaGCCCAGAGCAGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: NSTLLPVSASTTGQSLGYAVALG*PRAEAE
Trigger: CTCGGCTTCTGCTCTGGGCCAGCCTAGGGCTACTGC...ATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR CCA 90 bp GAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCACACCCATGCGGGGGTaGGCAGATTCCAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: ETESQGKCEFSTAGLVTLTPMRG*ADSRQT
Trigger: GGTCTGCCTGGAATCTGCCCACCCCCGCATGGGTGT...GAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTCGCGCCTCCGGCTCTGTaGAGGGATCAAGCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: GVVNVSGGSCGISCLLPLAPPAL*RDQAVA
Trigger: CGCGACAGCTTGATCCCTCCACAGAGCCGGAGGCGC...GAGGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp TGGCTTCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCTGGAGTGGGCTGTCCTaGGACAGGCTGACCGGGAAC +
Preference number: 4 (lower is better)
Translates to: WLLPLPLKEAHIFLRAELWSGLS*DRLTGN
Trigger: GTTCCCGGTCAGCCTGTCCCAGGACAGCCCACTCCA...GAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCAACAGGGCAGAGTCTaGGCTATCACCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PRFCQHNRAESGLSPWLLQQGRV*AITLAS
Trigger: AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTG...GAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCACTCCTCCTGTTCTGGAGGCAGCTGTaGAATTTCCTGTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SPYFGILPGGCAGCSLLLFWRQL*NFLFAP
Trigger: GGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAA...CAGGAGGAGTGAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCTGCATGCGCCGGCTCTGTaGAGGGATCAAGCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: SPPPFKGSPHFPASRTPLHAPAL*RDQAVA
Trigger: CGCGACAGCTTGATCCCTCCACAGAGCCGGCGCATG...CAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506578.5
CDS-3UTR TCA 90 bp TTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCTGTCCTGGGACAGGCTaGCCGGGAACAAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: FPASRTPLKSMADLWNRVCPGTG*PGTSPR
Trigger: GCGGGGACTTGTTCCCGGTCAGCCTGTCCCAGGACA...GACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGCGAGCCGAACTCCTCTaGAGAGTATGGCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: QGKCEFSTAGLVTLLCLWRAELL*RVWQTF
Trigger: AAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCG...CCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp ACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGCCCCACCTCCCAGGTaGCAGACTCCCTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TPLKSMADLWNRVRTRLKAPPPR*QTPWRG
Trigger: GCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGC...TTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TGTGGAATTTCCTGTTTGCTCCCCCTCTCCTGCCTGCCGCAGATGAGGACACACGAGTCGCAGCTTCTGTaGGAAGCAACACTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CGISCLLPLSCLPQMRTHESQLL*EATLRR
Trigger: CCGCCTCAGTGTTGCTTCTCACAGAAGCTGCGACTC...GTGTGTCCTCATCTGCGGCAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp ACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAACGAGGCTCTGGGCCCTaGCGCAGGGCTCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: TPLKSMADLWNRVRTRLKRGSGP*RRAPKL
Trigger: GAGCTTGGGAGCCCTGCGTCAGGGCCCAGAGCCTCG...TTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AACCCCCTGAAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAACACACTTGGCGGAGGAGCTaGTGGTCACATTGGCTATAT +
Preference number: 4 (lower is better)
Translates to: NPLKAHGPSCSPSRHPKHTWRRS*WSHWLY
Trigger: ATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGT...GTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAGGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp TTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTCGCGCACGTGCAGGATaGCTACATATGGATAGCGCT +
Preference number: 4 (lower is better)
Translates to: FSPFLPAQQGRVWAITLARARAG*LHMDSA
Trigger: AGCGCTATCCATATGTAGGCATCCTGCACGTGCGCG...AGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTAAGCCCACATTTTCCTaGGAGCCGAACTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLPAADEDTRGRLAGEASKPTFS*EPNSSE
Trigger: TTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTT...AGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGGGCTGTGGAATTTCCTGTTTaGTCCCCCTCTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NRNAGCAEVLVKQPRVGAVEFPV*SPSPAC
Trigger: GCAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCAC...AGCCCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGAGTCTCAGATTCCTGCCCTaGCGATCATCCAGACATCAG +
Preference number: 4 (lower is better)
Translates to: GKCEFSTAGLVTLLCLWSLRFLP*RSSRHQ
Trigger: CTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAG...ACTCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTCAGCGCTCAGATTCCTaGCCTGCCGATCATCCAGAC +
Preference number: 4 (lower is better)
Translates to: AFWLQAWSRVAASVRSNTQRSDS*PADHPD
Trigger: GTCTGGATGATCGGCAGGGCAGGAATCTGAGCGCTG...AGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCTCTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTGGCGGAGGAGCTGCTaGTCACATTGGCTATATATT +
Preference number: 4 (lower is better)
Translates to: PLLPAADEDTRGRLAGEAWRRSC*SHWLYI
Trigger: AATATATAGCCAATGTGACCAGCAGCTCCTCCGCCA...AGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp TCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACGTGCGGCTTCAAACTTaGCGGAGGAGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: STLLPVSASTTGQSLGYHVRLQT*RRSCWS
Trigger: TGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCAC...GTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCCCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGAGTCACCAATTCAGACTaGTCTTCTCCTTTCAACCAG +
Preference number: 4 (lower is better)
Translates to: LPIPPPETPSLPHLPGDRVTNSD*SSPFNQ
Trigger: CTGGTTGAAAGGAGAAGACCAGTCTGAATTGGTGAC...TCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTCAGGATGCCTACATATaGATAGCGCTCCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLQDAYI*IALHVL
Trigger: CAGGACATGGAGCGCTATCCATATGTAGGCATCCTG...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAAGCGCCTCCGGCTCTGTaGAGGGATCAAGCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: PTFSCEPNSSEEYGRPLEAPPAL*RDQAVA
Trigger: CGCGACAGCTTGATCCCTCCACAGAGCCGGAGGCGC...TTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AAAACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTCGGTGGGACTCCGTCTaGATCCGGGATTCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KTQPFSPFLPAQQGRVWARWDSV*IRDSLE
Trigger: CTCCAACGAATCCCGGATCCAGACGGAGTCCCACCG...AGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGAAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: PTLLSALSPSPYFGILPGSMADL*NRVRTR
Trigger: TCTCGTCCTGACACGATTCCAAAGGTCTGCCATACT...TCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACCAACAGGGCAGAGTCTaGGCTATCACCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SAFWLQAWSRVAASVRSNQQGRV*AITLAS
Trigger: AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTG...GTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCCGGAATCGGCGTTCTaGCTGCAGGCCTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: ETESQGKCEFSTAGLVTLPESAF*LQAWSR
Trigger: TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGG...GAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCGCAAGTGCGAGGCTCTaGGCCCTGACGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EEYGRPLESCQDETESQGASARL*ALTQGS
Trigger: GGAGCCCTGCGTCAGGGCCCAGAGCCTCGCACTTGC...GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCACGGGGAAGACTCGCTaGAGAGGCTTCTCGCACTTA +
Preference number: 4 (lower is better)
Translates to: ESAFWLQAWSRVAASVRSTGKTR*RGFSHL
Trigger: TAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGT...GCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTTCTGGAGGCAGCTGTaGAATTTCCTGTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLFWRQL*NFLFAP
Trigger: GGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAA...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGAAGACTAGAGAGGGGTaGTTAATGTTTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HPKHHPCPTSQVTDSLAWKTREG*LMFLEA
Trigger: TGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTT...CCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
3UTR CAA 72 bp CCCATGCGGGGGTGGGCAGATTCCAGGCAGACCACCTaGTCCACAGTCGTCACCAATTCAGACTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PMRGWADSRQTT*STVVTNSDWSS
Trigger: AGAAGACCAGTCTGAATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGGAATCTGCCCACCCCCGCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR TCA 90 bp ACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTGTGAGAAGCAACACTaGGGCGGGCCCGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: TREGWLMFLEAAVEFPVCCEKQH*GGPARP
Trigger: AGGGCGGGCGGGCCCGCCTCAGTGTTGCTTCTCACA...GCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TGCCCTCAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTGGGGAGCTCAGTGCACTGCCCTCAGCTaGCATCTGATGCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CPQLTSDARLWVSFWGAQCTALS*HLMQGS
Trigger: AGAGCCTTGCATCAGATGTCAGCTGAGGGCAGTGCA...CTGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR GCA 90 bp CCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCACTTGGCGGAGGAGCTaGTGGTCACATTGGCTATAT +
Preference number: 4 (lower is better)
Translates to: PRFCQHNRAESGLSPWLLTWRRS*WSHWLY
Trigger: ATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGT...GAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCCAGTATCCAGGTCAGTaGGGCTTCAAACTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: ESAFWLQAWSRVAASVRSQYPGQ*GFKLGG
Trigger: TCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTG...GCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp CAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGCCACGTCCTTGTTACTaGTCAGTATCCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QGKCEFSTAGLVTLLCLWPRPCY*SVSRSV
Trigger: CACTGACCTGGATACTGAGCAGTAACAAGGACGTGG...CCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGAGTCTCCTTTCAACCAGATaGCCACGTCCTTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: GKCEFSTAGLVTLLCLWSLLSTR*PRPCYC
Trigger: GCAGTAACAAGGACGTGGGCATCTGGTTGAAAGGAG...ACTCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TGCCCTCAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTGGGGAGCTCAGCGCGCACGTGCAGGATaGCTACATATGGATAGCGCT +
Preference number: 4 (lower is better)
Translates to: CPQLTSDARLWVSFWGAQRARAG*LHMDSA
Trigger: AGCGCTATCCATATGTAGGCATCCTGCACGTGCGCG...CTGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR GCA 90 bp AGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTCGCACACAGCAAGTaGGAGGCTCTGGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RKPTFSCEPNSSEEYGRPFAHSK*EALGPD
Trigger: GTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAA...AGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TCCTTGTTACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTTGGCGGAGGAGTTGCTCCCCCTCTCCTaGCTGCCGCAGATGAGGACA +
Preference number: 4 (lower is better)
Translates to: SLLLLSIQVSAASNLAEELLPLS*LPQMRT
Trigger: TGTCCTCATCTGCGGCAGGCAGGAGAGGGGGAGCAA...CTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR GCA 90 bp GCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGTGGAATTTCCTGTTTaGTCCCCCTCTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AFWLQAWSRVAASVRSNTVEFPV*SPSPAC
Trigger: GCAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCAC...AGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCCGGCTGCGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGGGCTGTGGTCACATGGCGGAGGAGCTGCTaGTCACATTGGCTATATATT +
Preference number: 4 (lower is better)
Translates to: AGCAEVLVKQPRVGAVVTWRRSC*SHWLYI
Trigger: AATATATAGCCAATGTGACCAGCAGCTCCTCCGCCA...TGTGACCACAGCCCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGGTCACCAATTCAGACTaGTCTTCTCCTTTCAACCAG +
Preference number: 4 (lower is better)
Translates to: LPSSRNRRSGCRPGLESQVTNSD*SSPFNQ
Trigger: CTGGTTGAAAGGAGAAGACCAGTCTGAATTGGTGAC...CTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCCCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGATCACCATCTCATACATaGCTTGTTCCTCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LPIPPPETPSLPHLPGDRSPSHT*LVPPLL
Trigger: TAGAAGAGGAGGAACAAGCCATGTATGAGATGGTGA...TCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGCAGGATGCCTACATATaGATAGCGCTCCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: QGKCEFSTAGLVTLLCLWQDAYI*IALHVL
Trigger: CAGGACATGGAGCGCTATCCATATGTAGGCATCCTG...CCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCGGATCCGGGATTCGTTaGAGGCCAGGAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: ETESQGKCEFSTAGLVTLGSGIR*RPGTPQ
Trigger: CTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCC...GAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCTCCTGCAACGCGGTaGGACTCCGTCTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: PTFSCEPNSSEEYGRPLESPATR*DSVWIR
Trigger: CCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGA...TTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTTCTGGGCTATCACCCTaGCTTCTCCCCCTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: AFWLQAWSRVAASVRSNTSGLSP*LLPLPL
Trigger: TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGA...AGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGACAGACTCCCTGGCGTaGCCATGCCCCAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: MADLWNRVRTRLKVKASVTDSLA*PCPSPP
Trigger: TGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGT...CACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTTTCTCCCTTCACCCTaGAGCTCTCAAGTAACAACC +
Preference number: 4 (lower is better)
Translates to: ASTTGQSLGYHPGFSPSLFLPSP*SSQVTT
Trigger: GGTTGTTACTTGAGAGCTCCAGGGTGAAGGGAGAAA...AAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTGAAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAACACCATCCCTTTCTCCCTTCACCCTaGAGCTCTCAAGTAACAACC +
Preference number: 4 (lower is better)
Translates to: LKAHGPSCSPSRHPKHHPFLPSP*SSQVTT
Trigger: GGTTGTTACTTGAGAGCTCCAGGGTGAAGGGAGAAA...GGGATGGTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCATTCTGGCTGCAGGCCTaGTCTAGAGTCGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LNPSPRFCQHNRAESGLSFWLQA*SRVAAS
Trigger: AGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAA...TGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACTGATTATGAGAACATaGCCTCACCACGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LNPSPRFCQHNRAESGLSLIMRT*PHHGAS
Trigger: GCTGGCCCCGTGGTGAGGCCATGTTCTCATAATCAG...TGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAGGGAGCTGCTATTACTTGGAGCCCAAGGCCTCCTAACTGGTATCACCACTGCTTCTGGGGAGCTCAGTaGGGTCGGACCCCATCTTAC +
Preference number: 4 (lower is better)
Translates to: EGAAITWSPRPPNWYHHCFWGAQ*GRTPSY
Trigger: GTAAGATGGGGTCCGACCCCACTGAGCTCCCCAGAA...GCAGTGGTGATACCAGTTAGGAGGCCTTGGGCTCCAAGTAATAGCAGCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR TCA 90 bp CCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGGCCTTCTGCTTGGCCTaGCAGAACTCATCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PSPRFCQHNRAESGLSPWAFCLA*QNSSVF
Trigger: AAAAACAGATGAGTTCTGTCAGGCCAAGCAGAAGGC...CCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCGCCTTCTGCTTGGCCTaGCAGAACTCATCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PRFCQHNRAESGLSPWLLAFCLA*QNSSVF
Trigger: AAAAACAGATGAGTTCTGTCAGGCCAAGCAGAAGGC...GAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCAAAGTCAAGGCAAGTGTaGATTCAGCACCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LNPSPRFCQHNRAESGLSKSRQV*IQHRRP
Trigger: AGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTT...TGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGGGCTTCTTCACCCAAAGGATaGCCAGGAAGACGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: NRNAGCAEVLVKQPRVGASSPKG*PGRRAV
Trigger: TACTGCTCGTCTTCCTGGGCATCCTTTGGGTGAAGA...AGCCCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR GCA 90 bp CTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACAGTATCCAGGTCAGTaGGGCTTCAAACTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LNPSPRFCQHNRAESGLSQYPGQ*GFKLGG
Trigger: TCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTG...TGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCCCACGTCCTTGTTACTaGTCAGTATCCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SQGKCEFSTAGLVTLLCLPRPCY*SVSRSV
Trigger: CACTGACCTGGATACTGAGCAGTAACAAGGACGTGG...GAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAACAGCATGTCCTCTCCTaGAACGCGGTGGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: PTFSCEPNSSEEYGRPLEQHVLS*NAVGLR
Trigger: ACGGAGTCCCACCGCGTTGCAGGAGAGGACATGCTG...TTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCCCTTCTCCCCGTTTCTaGCAGCACAACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EGWLMFLEAAVEFPVCSPPSPRF*QHNRAE
Trigger: CTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGG...GGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTCGTGCGGCTTCAAACTTaGCGGAGGAGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GVVNVSGGSCGISCLLPLVRLQT*RRSCWS
Trigger: TGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCAC...GAGGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCCCAGGATCACCATCTCATACATaGCTTGTTCCTCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: PTLLSALSPSPYFGILPGSPSHT*LVPPLL
Trigger: TAGAAGAGGAGGAACAAGCCATGTATGAGATGGTGA...TCCTGGGAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp TCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCAGGATGCCTACATATaGATAGCGCTCCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SPFLPAQQGRVWAITLASQDAYI*IALHVL
Trigger: CAGGACATGGAGCGCTATCCATATGTAGGCATCCTG...AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCGGATCCGGGATTCGTTaGAGGCCAGGAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: EGWLMFLEAAVEFPVCSPGSGIR*RPGTPQ
Trigger: CTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCC...GGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCTCTCCTGCAACGCGGTaGGACTCCGTCTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: EEYGRPLESCQDETESQGSPATR*DSVWIR
Trigger: CCGGATCCAGACGGAGTCCCACCGCGTTGCAGGAGA...GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCTGGAGTGGGCTGTCCTaGGACAGGCTGACCGGGAAC +
Preference number: 4 (lower is better)
Translates to: EEYGRPLESCQDETESQGWSGLS*DRLTGN
Trigger: GTTCCCGGTCAGCCTGTCCCAGGACAGCCCACTCCA...GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ACAGCCCCGCGTCGGGGCTGTGGTCACAGTAAAGCAAGGCGATCTTCGCACACATTTCTCCCTTCACCCTaGAGCTCTCAAGTAACAACC +
Preference number: 4 (lower is better)
Translates to: TAPRRGCGHSKARRSSHTFLPSP*SSQVTT
Trigger: GGTTGTTACTTGAGAGCTCCAGGGTGAAGGGAGAAA...TGTGTGCGAAGATCGCCTTGCTTTACTGTGACCACAGCCCCGACGCGGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTCCAGCAAGGCTGCCTTCTGCTTGGCCTGACAGAACTCATCTGTTTTTCTCTCCCGGAATCGGCGTTCTaGCTGCAGGCCTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: LQQGCLLLGLTELICFSLPESAF*LQAWSR
Trigger: TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGG...GAGAGAAAAACAGATGAGTTCTGTCAGGCCAAGCAGAAGGCAGCCTTGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR CCA 90 bp TGGCTTCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCACGGGGAAGACTCGCTaGAGAGGCTTCTCGCACTTA +
Preference number: 4 (lower is better)
Translates to: WLLPLPLKEAHIFLRAELTGKTR*RGFSHL
Trigger: TAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGT...GAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCTGATTATGAGAACATaGCCTCACCACGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NSTLLPVSASTTGQSLGYLIMRT*PHHGAS
Trigger: GCTGGCCCCGTGGTGAGGCCATGTTCTCATAATCAG...ATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CATCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTGCACCGCAGGCCTGGTaGCCCTCCTGTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HPAVSALILKPVAVFLIFAPQAW*PSCASG
Trigger: TCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGC...AAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TCTGTGGAGGGATCAAGCTGTCGCGCACGTGCAGGATGCCTACATATGGATAGCCGAGCCGAACTCCTCTaGAGAGTATGGCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: SVEGSSCRARAGCLHMDSRAELL*RVWQTF
Trigger: AAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCG...GCTATCCATATGTAGGCATCCTGCACGTGCGCGACAGCTTGATCCCTCCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR TCA 90 bp CCTCTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTCTTGTTTTCTATTCATaGAAACTCAACCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PLLPAADEDTRGRLAGEALVFYS*KLNPSP
Trigger: GGGAGAAGGGTTGAGTTTTCATGAATAGAAAACAAG...AGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp ACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACTTGGCGGAGGAGCTaGTGGTCACATTGGCTATAT +
Preference number: 4 (lower is better)
Translates to: TQPFSPFLPAQQGRVWAITWRRS*WSHWLY
Trigger: ATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGT...GATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGCGCGCACGTGCAGGATaGCTACATATGGATAGCGCT +
Preference number: 4 (lower is better)
Translates to: SPHFPASRTPLKSMADLWRARAG*LHMDSA
Trigger: AGCGCTATCCATATGTAGGCATCCTGCACGTGCGCG...CCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGCGCGCACGTGCAGGATaGCTACATATGGATAGCGCT +
Preference number: 4 (lower is better)
Translates to: CQDETESQGKCEFSTAGLRARAG*LHMDSA
Trigger: AGCGCTATCCATATGTAGGCATCCTGCACGTGCGCG...CAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TGGCTTCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCAAGCTGTCGCGCACGTaGAGGATGCCTACATATGGA +
Preference number: 4 (lower is better)
Translates to: WLLPLPLKEAHIFLRAELKLSRT*RMPTYG
Trigger: TCCATATGTAGGCATCCTGCACGTGCGCGACAGCTT...GAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCCCCAGACACGCTTCATaGGCCTCCGGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGPRHAS*ASGSVE
Trigger: CTCCACAGAGCCGGAGGCGCATGAAGCGTGTCTGGG...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp TTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCCCTTCTCCCCGTTTCTaGCAGCACAACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FPASRTPLKSMADLWNRVPSPRF*QHNRAE
Trigger: CTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGG...GACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTGCTGGGCCTGACAGCTaGTGCTCTTGTTTTCTATTC +
Preference number: 4 (lower is better)
Translates to: AFWLQAWSRVAASVRSNTAGPDS*CSCFLF
Trigger: GAATAGAAAACAAGAGCAGCAGCTGTCAGGCCCAGC...AGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTTAATGCTGGGCCTGACAGCTaGTGCTCTTGTTTTCTATTC +
Preference number: 4 (lower is better)
Translates to: PQMRTHGEDSLERLLALNAGPDS*CSCFLF
Trigger: GAATAGAAAACAAGAGCAGCAGCTGTCAGGCCCAGC...ATTAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TATGAGAACATGGCCTCACCACGGGGCCAGCGCTCAGATTCCTGCCCTGCCGATAACAGAAACGCCGGCTaGGCTGAAGTTCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: YENMASPRGQRSDSCPADNRNAG*AEVLVK
Trigger: TTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT...ATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAGGCCATGTTCTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGAGTAACAGAAACGCCGGCTaGGCTGAAGTTCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: GKCEFSTAGLVTLLCLWSNRNAG*AEVLVK
Trigger: TTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT...ACTCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTATGGCGGAGGAGCTGCTaGTCACATTGGCTATATATT +
Preference number: 4 (lower is better)
Translates to: QHNRAESGLSPWLLPLPLWRRSC*SHWLYI
Trigger: AATATATAGCCAATGTGACCAGCAGCTCCTCCGCCA...TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGGTCACCAATTCAGACTaGTCTTCTCCTTTCAACCAG +
Preference number: 4 (lower is better)
Translates to: QGKCEFSTAGLVTLLCLWVTNSD*SSPFNQ
Trigger: CTGGTTGAAAGGAGAAGACCAGTCTGAATTGGTGAC...CCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTTTCATATGTCTTTTCTAGCTCATCCTGCCATAAAGAGCCGAGCATGCTGGGGACACCCATGCGGGGGTaGGCAGATTCCAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: LSYVFSSSSCHKEPSMLGTPMRG*ADSRQT
Trigger: GGTCTGCCTGGAATCTGCCCACCCCCGCATGGGTGT...CCCCAGCATGCTCGGCTCTTTATGGCAGGATGAGCTAGAAAAGACATATGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR CCA 90 bp TGCCCTCAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTGGGGAGCTCAGCAGGATGCCTACATATaGATAGCGCTCCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: CPQLTSDARLWVSFWGAQQDAYI*IALHVL
Trigger: CAGGACATGGAGCGCTATCCATATGTAGGCATCCTG...CTGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR CCA 90 bp CTCCAGCAAGGCTGCCTTCTGCTTGGCCTGACAGAACTCATCTGTTTTTCTCTCGGATCCGGGATTCGTTaGAGGCCAGGAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: LQQGCLLLGLTELICFSLGSGIR*RPGTPQ
Trigger: CTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCC...GAGAGAAAAACAGATGAGTTCTGTCAGGCCAAGCAGAAGGCAGCCTTGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR CCA 90 bp CATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTCGGTGGGACTCCGTCTaGATCCGGGATTCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: HFPASRTPLKSMADLWNRRWDSV*IRDSLE
Trigger: CTCCAACGAATCCCGGATCCAGACGGAGTCCCACCG...ACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAATGGAGTGGGCTGTCCTaGGACAGGCTGACCGGGAAC +
Preference number: 4 (lower is better)
Translates to: TPLKSMADLWNRVRTRLKWSGLS*DRLTGN
Trigger: GTTCCCGGTCAGCCTGTCCCAGGACAGCCCACTCCA...TTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATCCTGTGCCTCTGGAGTaGGCTGTCCTGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: ADLWNRVRTRLKVKASVNPVPLE*AVLGQA
Trigger: AGCCTGTCCCAGGACAGCCCACTCCAGAGGCACAGG...ATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTCTGGGCTATCACCCTaGCTTCTCCCCCTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: EGWLMFLEAAVEFPVCSPSGLSP*LLPLPL
Trigger: TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGA...GGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGTCTGGGCTATCACCCTaGCTTCTCCCCCTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SPHFPASRTPLKSMADLWSGLSP*LLPLPL
Trigger: TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGA...CCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTCCGGAATCGGCGTTCTaGCTGCAGGCCTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: HFPASRTPLKSMADLWNRPESAF*LQAWSR
Trigger: TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGG...ACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGAAGACTAGAGAGGGGTaGTTAATGTTTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QGKCEFSTAGLVTLLCLWKTREG*LMFLEA
Trigger: TGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTT...CCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTCCTGATTATGAGAACATaGCCTCACCACGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GVVNVSGGSCGISCLLPLLIMRT*PHHGAS
Trigger: GCTGGCCCCGTGGTGAGGCCATGTTCTCATAATCAG...GAGGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGAAGTCAAGGCAAGTGTaGATTCAGCACCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CQDETESQGKCEFSTAGLKSRQV*IQHRRP
Trigger: AGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTT...CAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp AGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTCGAGCCGAACTCCTCTaGAGAGTATGGCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: RKPTFSCEPNSSEEYGRPRAELL*RVWQTF
Trigger: AAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCG...AGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CTCACCACGGGGCCAGCGCTCAGATTCCTGCCCTGCCGATCATCCAGACATCAGCTTGTTTTCTATTCATaGAAACTCAACCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LTTGPALRFLPCRSSRHQLVFYS*KLNPSP
Trigger: GGGAGAAGGGTTGAGTTTTCATGAATAGAAAACAAG...CTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAGCGCTGGCCCCGTGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TGGCTTCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCCTTTCAACCAGATaGCCACGTCCTTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: WLLPLPLKEAHIFLRAELLLSTR*PRPCYC
Trigger: GCAGTAACAAGGACGTGGGCATCTGGTTGAAAGGAG...GAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAAGCTGTCGCGCACGTaGAGGATGCCTACATATGGA +
Preference number: 4 (lower is better)
Translates to: SPHFPASRTPLKSMADLWKLSRT*RMPTYG
Trigger: TCCATATGTAGGCATCCTGCACGTGCGCGACAGCTT...CCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp ACTGAGGAGATCCTTCACTACTTGTGCCCTGGGGGAGGGAGCTGCTATTACTTGAAGCTGTCGCGCACGTaGAGGATGCCTACATATGGA +
Preference number: 4 (lower is better)
Translates to: TEEILHYLCPGGGSCYYLKLSRT*RMPTYG
Trigger: TCCATATGTAGGCATCCTGCACGTGCGCGACAGCTT...CAAGTAATAGCAGCTCCCTCCCCCAGGGCACAAGTAGTGAAGGATCTCCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR GCA 90 bp TCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGCCCACATTTTCCTaGGAGCCGAACTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SPPPFKGSPHFPASRTPLKPTFS*EPNSSE
Trigger: TTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTT...CAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTGTCGGTGATGGGTCCTaGCTGGAAGCCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SSSFSPDTEACCGVSYFSVGDGS*LEAQGL
Trigger: CAGGCCCTGGGCTTCCAGCCAGGACCCATCACCGAC...AGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR CCA 90 bp GCCGGCTGCGCTGAAGTTCTTGTTAAACAGCCCCGCGTCGGGGCTGTGGTCACAAATTACCAGCTTGGATaGCCAGGAAATTGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: AGCAEVLVKQPRVGAVVTNYQLG*PGNCRV
Trigger: AACTCTACAATTTCCTGGCCATCCAAGCTGGTAATT...TGTGACCACAGCCCCGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp ACAGCCCCGCGTCGGGGCTGTGGTCACAGTAAAGCAAGGCGATCTTCGCACACAAGCTGCTGGTCACATTaGCTATATATTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TAPRRGCGHSKARRSSHTSCWSH*LYILGL
Trigger: AAGCCCAAGAATATATAGCCAATGTGACCAGCAGCT...TGTGTGCGAAGATCGCCTTGCTTTACTGTGACCACAGCCCCGACGCGGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCAGCTGCTGGTCACATTaGCTATATATTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PVSASTTGQSLGYHPGFSSCWSH*LYILGL
Trigger: AAGCCCAAGAATATATAGCCAATGTGACCAGCAGCT...GGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAACGGTGGGACTCCGTCTaGATCCGGGATTCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TPLKSMADLWNRVRTRLKRWDSV*IRDSLE
Trigger: CTCCAACGAATCCCGGATCCAGACGGAGTCCCACCG...TTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTTTTCTCCCTTCACCCTaGAGCTCTCAAGTAACAACC +
Preference number: 4 (lower is better)
Translates to: AFWLQAWSRVAASVRSNTFLPSP*SSQVTT
Trigger: GGTTGTTACTTGAGAGCTCCAGGGTGAAGGGAGAAA...AGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCCCGGAATCGGCGTTCTaGCTGCAGGCCTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGPESAF*LQAWSR
Trigger: TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGG...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCTCAAATGAGGGAGACTaGAGCTTTATTAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: KHHPCPTSQVTDSLAWPCSNEGD*SFIKET
Trigger: TGTTTCCTTAATAAAGCTCCAGTCTCCCTCATTTGA...GCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTTCAAATGAGGGAGACTaGAGCTTTATTAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: IPPPETPSLPHLPGDRLPSNEGD*SFIKET
Trigger: TGTTTCCTTAATAAAGCTCCAGTCTCCCTCATTTGA...AGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR CAA 72 bp TGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: CEPNSSEEYGRP*ESCQDETESQG
Trigger: GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
3UTR CAA 72 bp GACTGGTCTTCTCCTTTCAACCAGATGCCCACGTCCTaGTTACTGCTCAGTATCCAGGTCAGTGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: DWSSPFNQMPTS*LLLSIQVSAAS
Trigger: TGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTTGAAAGGAGAAGACCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR TCA 90 bp AAACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTAGCCTTCTGCTTGGCCTaGCAGAACTCATCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KLNPSPRFCQHNRAESGLAFCLA*QNSSVF
Trigger: AAAAACAGATGAGTTCTGTCAGGCCAAGCAGAAGGC...TAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCCGAGCCGAACTCCTCTaGAGAGTATGGCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: FPASRTPLKSMADLWNRVRAELL*RVWQTF
Trigger: AAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCG...GACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTTCACTCCTCCTGACCTaGGGGACCGTGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSSFSPDTEACCGVSYFSSLLLT*GTVCLG
Trigger: GCCCAGACACACGGTCCCTCAGGTCAGGAGGAGTGA...AGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp TCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTAGAGTATTGCTCAAATaGGGGAGACTGGAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SPFLPAQQGRVWAITLASRVLLK*GRLELY
Trigger: ATAAAGCTCCAGTCTCCCTCATTTGAGCAATACTCT...AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTCTTCACCCAAAGGATaGCCAGGAAGACGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: EGWLMFLEAAVEFPVCSPSSPKG*PGRRAV
Trigger: TACTGCTCGTCTTCCTGGGCATCCTTTGGGTGAAGA...GGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR GCA 90 bp AAGACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTGCGGCGCTGAGGGCTTaGCCATCTTCACCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KTREGWLMFLEAAVEFPVAALRA*PSSPKG
Trigger: TCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGC...AACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR GCA 90 bp CCAGGCAGACCACCTTGTCCACAGTCGTCACCAATTCAGACTGGTCTTCTCCTTACTTGGCGGAGGAGCTaGTGGTCACATTGGCTATAT +
Preference number: 4 (lower is better)
Translates to: PGRPPCPQSSPIQTGLLLTWRRS*WSHWLY
Trigger: ATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGT...AAGGAGAAGACCAGTCTGAATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR GCA 90 bp CCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAAAAGCTGTCGCGCACGTaGAGGATGCCTACATATGGA +
Preference number: 4 (lower is better)
Translates to: PTFSCEPNSSEEYGRPLEKLSRT*RMPTYG
Trigger: TCCATATGTAGGCATCCTGCACGTGCGCGACAGCTT...TTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCCCTTCTCCCCGTTTCTaGCAGCACAACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGPSPRF*QHNRAE
Trigger: CTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGG...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCGCTGGGCCTGACAGCTaGTGCTCTTGTTTTCTATTC +
Preference number: 4 (lower is better)
Translates to: EGWLMFLEAAVEFPVCSPAGPDS*CSCFLF
Trigger: GAATAGAAAACAAGAGCAGCAGCTGTCAGGCCCAGC...GGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TGCCCTCAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTGGGGAGCTCAGTTTTCTAGCTCATCCTaGCATAAAGAGCCGAGCATG +
Preference number: 4 (lower is better)
Translates to: CPQLTSDARLWVSFWGAQFSSSS*HKEPSM
Trigger: CATGCTCGGCTCTTTATGGCAGGATGAGCTAGAAAA...CTGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR GCA 90 bp CTGCACTGCCCTCAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTGGGGAAACTGGTATCACCACTaGCAGTGTTCTCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: LHCPQLTSDARLWVSFWGNWYHH*QCSLYR
Trigger: TCTGTAGAGAGAACACTGGCAGTGGTGATACCAGTT...TCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCAGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR GCA 90 bp CACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTCCTGGGGGAGGGAGCTaGTATTACTTGGAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HHCQCSLYRGVGLCFHMSPGGGS*YYLEPK
Trigger: CTTGGGCTCCAAGTAATAGCAGCTCCCTCCCCCAGG...AGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR CCA 90 bp AAAACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTTGGCGGAGGAGCTGCTaGTCACATTGGCTATATATT +
Preference number: 4 (lower is better)
Translates to: KTQPFSPFLPAQQGRVWAWRRSC*SHWLYI
Trigger: AATATATAGCCAATGTGACCAGCAGCTCCTCCGCCA...AGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACGTCACCAATTCAGACTaGTCTTCTCCTTTCAACCAG +
Preference number: 4 (lower is better)
Translates to: STLLPVSASTTGQSLGYHVTNSD*SSPFNQ
Trigger: CTGGTTGAAAGGAGAAGACCAGTCTGAATTGGTGAC...GTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTATCACCATCTCATACATaGCTTGTTCCTCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: QHNRAESGLSPWLLPLPLSPSHT*LVPPLL
Trigger: TAGAAGAGGAGGAACAAGCCATGTATGAGATGGTGA...TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTCAGGATGCCTACATATaGATAGCGCTCCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: RKPTFSCEPNSSEEYGRPQDAYI*IALHVL
Trigger: CAGGACATGGAGCGCTATCCATATGTAGGCATCCTG...AGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: SPPPFKGSPHFPASRTPLSMADL*NRVRTR
Trigger: TCTCGTCCTGACACGATTCCAAAGGTCTGCCATACT...CAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTTTCTGGCTGCAGGCCTaGTCTAGAGTCGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HFPASRTPLKSMADLWNRFWLQA*SRVAAS
Trigger: AGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAA...ACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTTTGACTCACCGGCTCTGTaGAGGGATCAAGCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: PLPVFSLQRCGIVLSYVFDSPAL*RDQAVA
Trigger: CGCGACAGCTTGATCCCTCCACAGAGCCGGTGAGTC...AAAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR TCA 90 bp GAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTCAAGGCAAGTGTaGATTCAGCACCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EEYGRPLESCQDETESQGKSRQV*IQHRRP
Trigger: AGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTT...GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTAAGTCAAGGCAAGTGTaGATTCAGCACCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HFPASRTPLKSMADLWNRKSRQV*IQHRRP
Trigger: AGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTT...ACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTACTTGTTTTCTATTCATaGAAACTCAACCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QHNRAESGLSPWLLPLPLLVFYS*KLNPSP
Trigger: GGGAGAAGGGTTGAGTTTTCATGAATAGAAAACAAG...TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR TCA 90 bp GCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCAACACTAGAGTATTGCTCAAATaGGGGAGACTGGAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: AFWLQAWSRVAASVRSNTRVLLK*GRLELY
Trigger: ATAAAGCTCCAGTCTCCCTCATTTGAGCAATACTCT...AGTGTTGCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp ACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCCGCGCACGTGCAGGATaGCTACATATGGATAGCGCT +
Preference number: 4 (lower is better)
Translates to: TREGWLMFLEAAVEFPVCRARAG*LHMDSA
Trigger: AGCGCTATCCATATGTAGGCATCCTGCACGTGCGCG...GCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCAACAGAAACGCCGGCTaGGCTGAAGTTCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: ETESQGKCEFSTAGLVTLNRNAG*AEVLVK
Trigger: TTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT...GAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTTTGCTCCCCCTCTCCTaGCTGCCGCAGATGAGGACA +
Preference number: 4 (lower is better)
Translates to: SSSFSPDTEACCGVSYFSLLPLS*LPQMRT
Trigger: TGTCCTCATCTGCGGCAGGCAGGAGAGGGGGAGCAA...AGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATGTGGAATTTCCTGTTTaGTCCCCCTCTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ADLWNRVRTRLKVKASVNVEFPV*SPSPAC
Trigger: GCAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCAC...ATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CTTTCATATGTCTTTTCTAGCTCATCCTGCCATAAAGAGCCGAGCATGCTGGGGATAAAGAGCCGAGCATaGTGGGGAGCAGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LSYVFSSSSCHKEPSMLGIKSRA*WGAAGV
Trigger: CACTCCTGCTGCTCCCCAGCATGCTCGGCTCTTTAT...CCCCAGCATGCTCGGCTCTTTATGGCAGGATGAGCTAGAAAAGACATATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR GCA 90 bp ACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTTATCCTTCACTACTTGTaGCCTGGGGGAGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TTASVLSTEVWDCAFICLILHYL*PGGGSC
Trigger: GCAGCTCCCTCCCCCAGGGCACAAGTAGTGAAGGAT...AAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR CCA 90 bp TCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTAATTACCAGCTTGGATaGCCAGGAAATTGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: SPFLPAQQGRVWAITLASNYQLG*PGNCRV
Trigger: AACTCTACAATTTCCTGGCCATCCAAGCTGGTAATT...AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AAAGCAAGGCGATCTTCGCACACAGCAAGTGCGAGGCTCTGGGCCCTGACGCAGTTGGCTATATATTCTTaGGCTTCCATAACAGGAATG +
Preference number: 4 (lower is better)
Translates to: KARRSSHTASARLWALTQLAIYS*ASITGM
Trigger: CATTCCTGTTATGGAAGCCCAAGAATATATAGCCAA...CTGCGTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAAGATCGCCTTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp AATACCAGTAAGACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAAGTGCGGCTTCAAACTTaGCGGAGGAGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NTSKTREGWLMFLEAAVEVRLQT*RRSCWS
Trigger: TGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCAC...TTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTTACTGGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp CTGCACTGCCCTCAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTGGGGATCACCATCTCATACATaGCTTGTTCCTCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LHCPQLTSDARLWVSFWGSPSHT*LVPPLL
Trigger: TAGAAGAGGAGGAACAAGCCATGTATGAGATGGTGA...TCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCAGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR CCA 90 bp TCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTCGGTGGGACTCCGTCTaGATCCGGGATTCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSSFSPDTEACCGVSYFSRWDSV*IRDSLE
Trigger: CTCCAACGAATCCCGGATCCAGACGGAGTCCCACCG...AGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: CQDETESQGKCEFSTAGLSMADL*NRVRTR
Trigger: TCTCGTCCTGACACGATTCCAAAGGTCTGCCATACT...CAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCACGGGGAAGACTCGCTaGAGAGGCTTCTCGCACTTA +
Preference number: 4 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGTGKTR*RGFSHL
Trigger: TAAGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGT...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTTTTAAGAGCCGAGCATGCTaGGGAGCAGCAGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: HCQCSLYRGVGLCFHMSFKSRAC*GAAGVG
Trigger: TCCCACTCCTGCTGCTCCCCAGCATGCTCGGCTCTT...AAAAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR GCA 90 bp AAGACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTCGCGCACGTGCAGGATaGCTACATATGGATAGCGCT +
Preference number: 4 (lower is better)
Translates to: KTREGWLMFLEAAVEFPVRARAG*LHMDSA
Trigger: AGCGCTATCCATATGTAGGCATCCTGCACGTGCGCG...AACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp ACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCAAGCTGTCGCGCACGTaGAGGATGCCTACATATGGA +
Preference number: 4 (lower is better)
Translates to: TREGWLMFLEAAVEFPVCKLSRT*RMPTYG
Trigger: TCCATATGTAGGCATCCTGCACGTGCGCGACAGCTT...GCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTAAGCCCACATTTTCCTaGGAGCCGAACTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HFPASRTPLKSMADLWNRKPTFS*EPNSSE
Trigger: TTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTT...ACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp ATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGGCTGGGCCTGACAGCTaGTGCTCTTGTTTTCTATTC +
Preference number: 4 (lower is better)
Translates to: MADLWNRVRTRLKVKASVAGPDS*CSCFLF
Trigger: GAATAGAAAACAAGAGCAGCAGCTGTCAGGCCCAGC...CACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp TCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTAATCGGCGTTCTGGCTaGAGGCCTGGTCTAGAGTCG +
Preference number: 4 (lower is better)
Translates to: SSSFSPDTEACCGVSYFSNRRSG*RPGLES
Trigger: CGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATT...AGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TGGCTTCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCAGCTGCTGGTCACATTaGCTATATATTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: WLLPLPLKEAHIFLRAELSCWSH*LYILGL
Trigger: AAGCCCAAGAATATATAGCCAATGTGACCAGCAGCT...GAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AATACCAGTAAGACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATCTGGGCTATCACCCTaGCTTCTCCCCCTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: NTSKTREGWLMFLEAAVESGLSP*LLPLPL
Trigger: TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGA...TTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTTACTGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCTCAAATGAGGGAGACTaGAGCTTTATTAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: ESAFWLQAWSRVAASVRSSNEGD*SFIKET
Trigger: TGTTTCCTTAATAAAGCTCCAGTCTCCCTCATTTGA...GCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGAGTCGCAGCTTCTGTGAGAAGCTGTTTCTTATTTTTCTaGCTGGAGCCTGATTATGAG +
Preference number: 4 (lower is better)
Translates to: ESAFWLQAWSRVAASVRSCFLFF*LEPDYE
Trigger: CTCATAATCAGGCTCCAGCCAGAAAAATAAGAAACA...GCTTCTCACAGAAGCTGCGACTCTAGACCAGGCCTGCAGCCAGAACGCCGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CTTTCATATGTCTTTTCTAGCTCATCCTGCCATAAAGAGCCGAGCATGCTGGGGTCACTACTTGTGCCCTaGGGGAGGGAGCTGCTATTA +
Preference number: 4 (lower is better)
Translates to: LSYVFSSSSCHKEPSMLGSLLVP*GRELLL
Trigger: TAATAGCAGCTCCCTCCCCCAGGGCACAAGTAGTGA...CCCCAGCATGCTCGGCTCTTTATGGCAGGATGAGCTAGAAAAGACATATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR CAA 72 bp TTACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTaGGCGGAGGAGCTGCTGGTCACATTGGCTATATAT +
Preference number: 4 (lower is better)
Translates to: LLLSIQVSAASN*AEELLVTLAIY
Trigger: ATATATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR TCA 90 bp GAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCAGAGTATTGCTCAAATaGGGGAGACTGGAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: EGWLMFLEAAVEFPVCSPRVLLK*GRLELY
Trigger: ATAAAGCTCCAGTCTCCCTCATTTGAGCAATACTCT...GGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AATACCAGTAAGACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAACAGTATCCAGGTCAGTaGGGCTTCAAACTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: NTSKTREGWLMFLEAAVEQYPGQ*GFKLGG
Trigger: TCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTG...TTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTTACTGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCCCACGTCCTTGTTACTaGTCAGTATCCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGPRPCY*SVSRSV
Trigger: CACTGACCTGGATACTGAGCAGTAACAAGGACGTGG...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp ACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCCTCCTTTCAACCAGATaGCCACGTCCTTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: TREGWLMFLEAAVEFPVCLLSTR*PRPCYC
Trigger: GCAGTAACAAGGACGTGGGCATCTGGTTGAAAGGAG...GCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR GCA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCCTCCTTTCAACCAGATaGCCACGTCCTTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGLLSTR*PRPCYC
Trigger: GCAGTAACAAGGACGTGGGCATCTGGTTGAAAGGAG...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp AACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATAATTACCAGCTTGGATaGCCAGGAAATTGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: NSTLLPVSASTTGQSLGYNYQLG*PGNCRV
Trigger: AACTCTACAATTTCCTGGCCATCCAAGCTGGTAATT...ATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CATCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTTCTGGGCTATCACCCTaGCTTCTCCCCCTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: HPAVSALILKPVAVFLIFSGLSP*LLPLPL
Trigger: TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGA...AAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGATG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTCAACAGGGCAGAGTCTaGGCTATCACCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSFSPDTEACCGVSYFSQQGRV*AITLAS
Trigger: AGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTG...AGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATTTCTGGAGGCAGCTGTaGAATTTCCTGTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ADLWNRVRTRLKVKASVNFWRQL*NFLFAP
Trigger: GGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAA...ATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTTTTCTGATGCAAGGCTCTaGGTTTCCTTCTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLPVFSLQRCGIVLSYVFSDARL*VSFWGA
Trigger: AGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGA...AAAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR CCA 90 bp CCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTTTCCAAGGCCTCCTAACTaGTATCACCACTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PLPVFSLQRCGIVLSYVFPRPPN*YHHCQC
Trigger: ACACTGGCAGTGGTGATACCAGTTAGGAGGCCTTGG...AAAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR CCA 90 bp ACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCTTGGAGCTGCTATTACTTaGAGCCCAAGGCCTCCTAAC +
Preference number: 4 (lower is better)
Translates to: TTASVLSTEVWDCAFICLGAAIT*SPRPPN
Trigger: GTTAGGAGGCCTTGGGCTCCAAGTAATAGCAGCTCC...AAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504692.1
3UTR CAA 72 bp CACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATaGTGCTTTCATATGTCTTTTCTAGCTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: HHCQCSLYRGVG*CFHMSFLAHPA
Trigger: GGCAGGATGAGCTAGAAAAGACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR TCA 90 bp TGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGCTTGTTTTCTATTCATaGAAACTCAACCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: CQDETESQGKCEFSTAGLLVFYS*KLNPSP
Trigger: GGGAGAAGGGTTGAGTTTTCATGAATAGAAAACAAG...CAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR GCA 90 bp AGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTGGCAAGCCCACATTTTCCTaGGAGCCGAACTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSFSPDTEACCGVSYFSGKPTFS*EPNSSE
Trigger: TTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTT...GCCAGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp GAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAACAGAAACGCCGGCTaGGCTGAAGTTCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: EEYGRPLESCQDETESQGNRNAG*AEVLVK
Trigger: TTTAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTT...GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR GCA 90 bp CATCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTCAGATTCCTGCCCTaGCGATCATCCAGACATCAG +
Preference number: 4 (lower is better)
Translates to: HPAVSALILKPVAVFLIFLRFLP*RSSRHQ
Trigger: CTGATGTCTGGATGATCGGCAGGGCAGGAATCTGAG...AAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCAGTATGGCAGACCTTTaGAATCGTGTCAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGSMADL*NRVRTR
Trigger: TCTCGTCCTGACACGATTCCAAAGGTCTGCCATACT...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AAAACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTTCTTATTTTTCTGGCTaGAGCCTGATTATGAGAACA +
Preference number: 4 (lower is better)
Translates to: KTQPFSPFLPAQQGRVWASYFSG*SLIMRT
Trigger: TGTTCTCATAATCAGGCTCCAGCCAGAAAAATAAGA...AGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AAAACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTTGTTTCTTATTTTTCTaGCTGGAGCCTGATTATGAG +
Preference number: 4 (lower is better)
Translates to: KTQPFSPFLPAQQGRVWACFLFF*LEPDYE
Trigger: CTCATAATCAGGCTCCAGCCAGAAAAATAAGAAACA...AGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR TCA 90 bp CTTTCATATGTCTTTTCTAGCTCATCCTGCCATAAAGAGCCGAGCATGCTGGGGTCCACTTACAGAGACTaGGGAGATCCTTCACTACTT +
Preference number: 4 (lower is better)
Translates to: LSYVFSSSSCHKEPSMLGSTYRD*GDPSLL
Trigger: AAGTAGTGAAGGATCTCCTCAGTCTCTGTAAGTGGA...CCCCAGCATGCTCGGCTCTTTATGGCAGGATGAGCTAGAAAAGACATATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR CCA 90 bp TCCTTGTTACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTTGGCGGAGGAGTTGGCTATATATTCTTaGGCTTCCATAACAGGAATG +
Preference number: 4 (lower is better)
Translates to: SLLLLSIQVSAASNLAEELAIYS*ASITGM
Trigger: CATTCCTGTTATGGAAGCCCAAGAATATATAGCCAA...CTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR CCA 90 bp GAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAATTACCAGCTTGGATaGCCAGGAAATTGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: EEYGRPLESCQDETESQGNYQLG*PGNCRV
Trigger: AACTCTACAATTTCCTGGCCATCCAAGCTGGTAATT...GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAAGCTGCTGGTCACATTaGCTATATATTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TPLKSMADLWNRVRTRLKSCWSH*LYILGL
Trigger: AAGCCCAAGAATATATAGCCAATGTGACCAGCAGCT...TTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp TCACCACTGCCAGTGTTCTCTCTACAGAGGTGTGGGATTGTGCTTTCATATGTCCTCTCTACAGAGGTGTaGGATTGTGCTTTCATATGT +
Preference number: 4 (lower is better)
Translates to: SPLPVFSLQRCGIVLSYVLSTEV*DCAFIC
Trigger: ACATATGAAAGCACAATCCCACACCTCTGTAGAGAG...GACATATGAAAGCACAATCCCACACCTCTGTAGAGAGAACACTGGCAGTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS-3UTR TCA 90 bp ACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAACTTGTTTTCTATTCATaGAAACTCAACCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TPLKSMADLWNRVRTRLKLVFYS*KLNPSP
Trigger: GGGAGAAGGGTTGAGTTTTCATGAATAGAAAACAAG...TTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp ATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGTCTTATTTTTCTGGCTaGAGCCTGATTATGAGAACA +
Preference number: 4 (lower is better)
Translates to: MADLWNRVRTRLKVKASVSYFSG*SLIMRT
Trigger: TGTTCTCATAATCAGGCTCCAGCCAGAAAAATAAGA...CACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CCA 90 bp GCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGAATTTGGCTATATATTCTTaGGCTTCCATAACAGGAATG +
Preference number: 4 (lower is better)
Translates to: ADLWNRVRTRLKVKASVNLAIYS*ASITGM
Trigger: CATTCCTGTTATGGAAGCCCAAGAATATATAGCCAA...ATTCACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CCA 90 bp AAGACTAGAGAGGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTTGGCTATATATTCTTaGGCTTCCATAACAGGAATG +
Preference number: 4 (lower is better)
Translates to: KTREGWLMFLEAAVEFPVLAIYS*ASITGM
Trigger: CATTCCTGTTATGGAAGCCCAAGAATATATAGCCAA...AACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCCTCTCTAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CCA 90 bp TCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTTGTTTCTTATTTTTCTaGCTGGAGCCTGATTATGAG +
Preference number: 4 (lower is better)
Translates to: SSSFSPDTEACCGVSYFSCFLFF*LEPDYE
Trigger: CTCATAATCAGGCTCCAGCCAGAAAAATAAGAAACA...AGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
3UTR CAA 72 bp GCTATATATTCTTGGGCTTCCATAACAGGAATGCATTaGCTTTTTAGATTCTCTGGATTTCCACACTCAAAA +
Preference number: 4 (lower is better)
Translates to: AIYSWASITGMH*LFRFSGFPHSK
Trigger: TTTTGAGTGTGGAAATCCAGAGAATCTAAAAAGCAAATGCATTCCTGTTATGGAAGCCCAAGAATATATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS GCA 90 bp TCCCGGGTGGTGTCGGTGATGGGTCCTGGCTGGAAGCCCAGGGCCTaGAGCTCCCGCCGCAGTTCCAGGTCCGACAGGCCGGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: SRVVSVMGPGWKPRA*SSRRSSRSDRPAMA
Trigger: GGCCATGGCCGGCCTGTCGGACCTGGAACTGCGGCGGGAGCTGCAGGCCCTGGGCTTCCAGCCAGGACCCATCACCGACACCACCCGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000421671.6
CDS-3UTR CAA 90 bp CTGAGGCGGGCCCGCCCGCCCTGGGGCTGCCCGACCCTCCTCTCTGCTCTCAGCAGTGCGGCTTCAAACTaGGCGGAGGAGCTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LRRARPPWGCPTLLSALSSAASN*AEELLV
Trigger: GACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACT...GCTGAGAGCAGAGAGGAGGGTCGGGCAGCCCCAGGGCGGGCGGGCCCGCCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS CCA 90 bp CACCAGGCTCTCCGAGGCCAGACCCCAGCCACGGCGCCTCCACCATaGTCTCTGGCCAGGAGGTGTCAGGACCTGCAGAGGTGGGGACAC +
Preference number: 5 (lower is better)
Translates to: HQALRGQTPATAPPP*SLARRCQDLQRWGH
Trigger: GTGTCCCCACCTCTGCAGGTCCTGACACCTCCTGGCCAGAGACCATGGTGGAGGCGCCGTGGCTGGGGTCTGGCCTCGGAGAGCCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS-3UTR CAA 90 bp CCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTCGCACTGGCGCGGCGCCTGAGTaGCGCCGGGCGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: PAADEDTRGRLAGEASRTGAAPE*RRAGRI
Trigger: TATCCTGCCCGCCCGGCGCAACTCAGGCGCCGCGCC...AGTGCGAGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR CAA 90 bp GGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGAGTGGCGCGGCGCCTGAGTaGCGCCGGGCGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: GKCEFSTAGLVTLLCLWSGAAPE*RRAGRI
Trigger: TATCCTGCCCGCCCGGCGCAACTCAGGCGCCGCGCC...ACTCCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS GCA 90 bp GCACAGCACGCCAAGGGGCAGCTCCCCCGAGTGGCTTTGGAGGCCTaGTCCCATAGGATGGAGCTGGCAGCCTCCCACTTAGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: AQHAKGQLPRVALEA*SHRMELAASHLVLP
Trigger: GGGCAGGACTAAGTGGGAGGCTGCCAGCTCCATCCTATGGGAGCAGGCCTCCAAAGCCACTCGGGGGAGCTGCCCCTTGGCGTGCTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS-3UTR CAA 90 bp CATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCGCTGCGCTGAAGTTCTaGTTAAACAGCCCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: HPCPTSQVTDSLAWPCPSAALKF*LNSPAS
Trigger: CGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGC...GCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CAA 90 bp CTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCAGCGGACGCTGCTCCCTaGTGGCCGGCAGGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LNPSPRFCQHNRAESGLSADAAP*WPAGGS
Trigger: GCTGCCCCCTGCCGGCCACAAGGGAGCAGCGTCCGC...TGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
CDS-3UTR CAA 90 bp CCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCCCCAGCCCACCAGCCTGTGGAATTTCCTGTTaGCTCCCCCTCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PTSQVTDSLAWPCPSPPACGISC*LPLSCL
Trigger: CAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCACA...GGCTGGTGGGCTGGGGCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS GCA 90 bp CCGCCTCCTGCGGCGCTGAGGGCTTGCCCATCTTCACCCAAAGGATaGCCAGGAAGACGAGCAGTAGCCCTAGGCTGGCCCAGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: PPPAALRACPSSPKG*PGRRAVALGWPRAE
Trigger: TTCTGCTCTGGGCCAGCCTAGGGCTACTGCTCGTCTTCCTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000442696.6
ENST00000614475.4
CDS GCA 90 bp GCCCCAGATTTGGTGACCTGCCATAGCCCTTGGTCCTCGCTCCTGTaGTGTGGTTTGCCTGACTCCCCGAGAGCAGGGAGGGTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: APDLVTCHSPWSSLL*CGLPDSPRAGRVQG
Trigger: GCCCTGCACCCTCCCTGCTCTCGGGGAGTCAGGCAAACCACAGCACAGGAGCGAGGACCAAGGGCTATGGCAGGTCACCAAATCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 90 bp GGGCCACGCACGCATACACTATTTAACACGTGTGCGTGGCCTGACTaGCCTGACCCAGCACAGCCTGGGGGACTTCGGGTGGCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: GPRTHTLFNTCAWPD*PDPAQPGGLRVASE
Trigger: CTCACTGGCCACCCGAAGTCCCCCAGGCTGTGCTGGGTCAGGGCAGTCAGGCCACGCACACGTGTTAAATAGTGTATGCGTGCGTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 90 bp GAGGGTGCAGGGCCACGCACGCATACACTATTTAACACGTGTGCGTaGCCTGACTGCCCTGACCCAGCACAGCCTGGGGGACTTCGGGTG +
Preference number: 5 (lower is better)
Translates to: EGAGPRTHTLFNTCA*PDCPDPAQPGGLRV
Trigger: CACCCGAAGTCCCCCAGGCTGTGCTGGGTCAGGGCAGTCAGGCCACGCACACGTGTTAAATAGTGTATGCGTGCGTGGCCCTGCACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 90 bp GACAGCTCTGTTGGAGCACGGGTGTTAGCTGACGAGCGAGGACAGTaGTTGCAGGCACCCATGCTGCGTCGCCACCCTGCCCACACTCAC +
Preference number: 5 (lower is better)
Translates to: DSSVGARVLADERGQ*LQAPMLRRHPAHTH
Trigger: GTGAGTGTGGGCAGGGTGGCGACGCAGCATGGGTGCCTGCAACCACTGTCCTCGCTCGTCAGCTAACACCCGTGCTCCAACAGAGCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS-3UTR CAA 90 bp AAACACCATCCCTGCCCCACCTCCCAGGTGACAGACTCCCTGGCGTGGCCATGCAGTGCGGCTTCAAACTaGGCGGAGGAGCTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: KHHPCPTSQVTDSLAWPCSAASN*AEELLV
Trigger: GACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACT...GCATGGCCACGCCAGGGAGTCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CAA 90 bp GGCTGCCCGACCCTCCTCTCTGCTCTCAGCCCCAGTCCCTACTTCGGGATCCTCTGGATCCGGGATTCGTaGGAGGCCAGGAACTCCACA +
Preference number: 5 (lower is better)
Translates to: GCPTLLSALSPSPYFGILWIRDS*EARNST
Trigger: TGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCA...GAGGATCCCGAAGTAGGGACTGGGGCTGAGAGCAGAGAGGAGGGTCGGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CAA 90 bp CTCCCCATCCCGCCACCCGAAACACCATCCCTGCCCCACCTCCCAGGTGACAGAGCTGCGCTGAAGTTCTaGTTAAACAGCCCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: LPIPPPETPSLPHLPGDRAALKF*LNSPAS
Trigger: CGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGC...TCTGTCACCTGGGAGGTGGGGCAGGGATGGTGTTTCGGGTGGCGGGATGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS CCA 90 bp TCTTACCTCACACCCAGCGCCCCAGCCAGGGACTCACCGGCTCTGTaGAGGGATCAAGCTGTCGCGCACGTGCAGGATGCCTACATATGG +
Preference number: 5 (lower is better)
Translates to: SYLTPSAPARDSPAL*RDQAVAHVQDAYIW
Trigger: CCATATGTAGGCATCCTGCACGTGCGCGACAGCTTGATCCCTCCACAGAGCCGGTGAGTCCCTGGCTGGGGCGCTGGGTGTGAGGTAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS TCA 90 bp CCAGCTTCAGACCTGAGACAGCTCTGTTGGAGCACGGGTGTTAGCTaGCGAGCGAGGACAGTGGTTGCAGGCACCCATGCTGCGTCGCCA +
Preference number: 5 (lower is better)
Translates to: PASDLRQLCWSTGVS*RARTVVAGTHAASP
Trigger: TGGCGACGCAGCATGGGTGCCTGCAACCACTGTCCTCGCTCGTCAGCTAACACCCGTGCTCCAACAGAGCTGTCTCAGGTCTGAAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 90 bp TGCGCCGGCTCTGTGGAGGGATCAAGCTGTCGCGCACGTGCAGGATaGCTACATATGGATAGCGCTCCATGTCCTGCTCCCAGTCCACGT +
Preference number: 5 (lower is better)
Translates to: CAGSVEGSSCRARAG*LHMDSAPCPAPSPR
Trigger: ACGTGGACTGGGAGCAGGACATGGAGCGCTATCCATATGTAGGCATCCTGCACGTGCGCGACAGCTTGATCCCTCCACAGAGCCGGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506578.5
CDS GCA 90 bp TGCAGGCACCCATGCTGCGTCGCCACCCTGCCCACACTCACCAGATaGCCACGTCCTTGTTACTGCTCAGTATCCAGGTCAGTGCGGCTT +
Preference number: 5 (lower is better)
Translates to: CRHPCCVATLPTLTR*PRPCYCSVSRSVRL
Trigger: AAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTGAGTGTGGGCAGGGTGGCGACGCAGCATGGGTGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS GCA 90 bp CGAGCGAGGACAGTGGTTGCAGGCACCCATGCTGCGTCGCCACCCTaGCCACACTCACCAGATGCCCACGTCCTTGTTACTGCTCAGTAT +
Preference number: 5 (lower is better)
Translates to: RARTVVAGTHAASPP*PHSPDAHVLVTAQY
Trigger: ATACTGAGCAGTAACAAGGACGTGGGCATCTGGTGAGTGTGGGCAGGGTGGCGACGCAGCATGGGTGCCTGCAACCACTGTCCTCGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS-3UTR CAA 90 bp CGCAGGGCTCCCAAGCTCCCGGAATCGGCGTTCTGGCTGCAGGCCTGGTCTAGACAGATGCCCACGTCCTaGTTACTGCTCAGTATCCAG +
Preference number: 5 (lower is better)
Translates to: RRAPKLPESAFWLQAWSRQMPTS*LLLSIQ
Trigger: CTGGATACTGAGCAGTAACAAGGACGTGGGCATCTG...TCTAGACCAGGCCTGCAGCCAGAACGCCGATTCCGGGAGCTTGGGAGCCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CAA 90 bp GAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCGCGGACGCTGCTCCCTaGTGGCCGGCAGGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: EEYGRPLESCQDETESQGADAAP*WPAGGS
Trigger: GCTGCCCCCTGCCGGCCACAAGGGAGCAGCGTCCGC...GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
CDS GCA 90 bp CTCACCGGCTCTGTGGAGGGATCAAGCTGTCGCGCACGTGCAGGATaGCTACATATGGATAGCGCTCCATGTCCTGCTCCCAGTCCACGT +
Preference number: 5 (lower is better)
Translates to: LTGSVEGSSCRARAG*LHMDSAPCPAPSPR
Trigger: ACGTGGACTGGGAGCAGGACATGGAGCGCTATCCATATGTAGGCATCCTGCACGTGCGCGACAGCTTGATCCCTCCACAGAGCCGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS GCA 90 bp GTCGCCACCCTGCCCACACTCACCAGATGCCCACGTCCTTGTTACTaGTCAGTATCCAGGTCAGTGCGGCTTCAAACTTGGCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: VATLPTLTRCPRPCY*SVSRSVRLQTWRRS
Trigger: GCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTGAGTGTGGGCAGGGTGGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS-3UTR CAA 90 bp AAAGCAAGGCGATCTTCGCACACAGCAAGTGCGAGGCTCTGGGCCCTGACGCAGGGCAATAACTTCATGTaGTCCTCCGCCTCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: KARRSSHTASARLWALTQGNNFM*SSASCG
Trigger: GCCGCAGGAGGCGGAGGACAACATGAAGTTATTGCC...CTGCGTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAAGATCGCCTTGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR CAA 90 bp CCAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTTGGATCCGGGATTCGTaGGAGGCCAGGAACTCCACA +
Preference number: 5 (lower is better)
Translates to: PAQQGRVWAITLASPPPFWIRDS*EARNST
Trigger: TGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCA...AAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp AGTCCCTACTTCGGGATCCTCCCAGGAGGCTGTGCCGGCTGCTCACTCCTCCTGGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAG +
Preference number: 5 (lower is better)
Translates to: SPYFGILPGGCAGCSLLLEYGRP*ESCQDE
Trigger: CTCGTCCTGACACGATTCCAAAGGTCTGCCATACTC...CAGGAGGAGTGAGCAGCCGGCACAGCCTCCTGGGAGGATCCCGAAGTAGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CAA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCGCGGACGCTGCTCCCTaGTGGCCGGCAGGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGADAAP*WPAGGS
Trigger: GCTGCCCCCTGCCGGCCACAAGGGAGCAGCGTCCGC...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
CDS GCA 90 bp GCAATAACTTCATGTTGTCCTCCGCCTCCTGCGGCGCTGAGGGCTTaGCCATCTTCACCCAAAGGATGCCCAGGAAGACGAGCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: AITSCCPPPPAALRA*PSSPKGCPGRRAVA
Trigger: GGCTACTGCTCGTCTTCCTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACATGAAGTTATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS GCA 90 bp TGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTTGGCGGAGGAGCTaGTGGTCACATTCTGTGGGAGGGCGCGGGAGAAGGTTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: CSVSRSVRLQTWRRS*WSHSVGGRGRRLVR
Trigger: CCGAACTAACCTTCTCCCGCGCCCTCCCACAGAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CCA 90 bp TCAGTATCCAGGTCAGTGCGGCTTCAAACTTGGCGGAGGAGCTGCTaGTCACATTCTGTGGGAGGGCGCGGGAGAAGGTTAGTTCGGCGT +
Preference number: 5 (lower is better)
Translates to: SVSRSVRLQTWRRSC*SHSVGGRGRRLVRR
Trigger: ACGCCGAACTAACCTTCTCCCGCGCCCTCCCACAGAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CCA 90 bp CGTCCTTGTTACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTTaGCGGAGGAGCTGCTGGTCACATTCTGTGGGAGGGCGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: RPCYCSVSRSVRLQT*RRSCWSHSVGGRGR
Trigger: TCTCCCGCGCCCTCCCACAGAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CCA 90 bp CTAGGACTCTTCCTGCCCTTGCCAGGCCTGCCTGGACCACGTAGATaGCCTCTCGATTCGGTTCCTCCTCTCCCTTTCCCAATCCAGTTG +
Preference number: 5 (lower is better)
Translates to: LGLFLPLPGLPGPRR*PLDSVPPLPFPIQL
Trigger: CAACTGGATTGGGAAAGGGAGAGGAGGAACCGAATCGAGAGGCCATCTACGTGGTCCAGGCAGGCCTGGCAAGGGCAGGAAGAGTCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS-3UTR CAA 90 bp GAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCTGCGGCGCTGAGGGCTaGCCCATCTTCACCCAAAGG +
Preference number: 5 (lower is better)
Translates to: ETESQGKCEFSTAGLVTLCGAEG*PIFTQR
Trigger: CCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCA...GAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR CAA 90 bp CTGAAGGCACATGGACCAAGCTGCTCCCCATCCCGCCACCCGAAACACCATCCCCAGATGCCCACGTCCTaGTTACTGCTCAGTATCCAG +
Preference number: 5 (lower is better)
Translates to: LKAHGPSCSPSRHPKHHPQMPTS*LLLSIQ
Trigger: CTGGATACTGAGCAGTAACAAGGACGTGGGCATCTG...GGGATGGTGTTTCGGGTGGCGGGATGGGGAGCAGCTTGGTCCATGTGCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CAA 90 bp CAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTATGGATCCGGGATTCGTaGGAGGCCAGGAACTCCACA +
Preference number: 5 (lower is better)
Translates to: QHNRAESGLSPWLLPLPLWIRDS*EARNST
Trigger: TGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCA...TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp TGCCCTCAGCTGACATCTGATGCAAGGCTCTGGGTTTCCTTCTGGGGAGCTCAGGAGATCCTTCACTACTaGTGCCCTGGGGGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: CPQLTSDARLWVSFWGAQEILHY*CPGGGS
Trigger: GCTCCCTCCCCCAGGGCACAAGTAGTGAAGGATCTC...CTGAGCTCCCCAGAAGGAAACCCAGAGCCTTGCATCAGATGTCAGCTGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS TCA 90 bp AACCCACATGATTCTGCTGGGAGACCCAGCCTCCAGCTTCAGACCTaGGACAGCTCTGTTGGAGCACGGGTGTTAGCTGACGAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: NPHDSAGRPSLQLQT*DSSVGARVLADERG
Trigger: TCCTCGCTCGTCAGCTAACACCCGTGCTCCAACAGAGCTGTCTCAGGTCTGAAGCTGGAGGCTGGGTCTCCCAGCAGAATCATGTGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 90 bp ACTCAAAATTACTGTTGTCCTCCGCCTCCTGCGGCGCTGAGGGCTTaGCCATCTTCACCCAAAGGATGCCCAGGAAGACGAGCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: TQNYCCPPPPAALRA*PSSPKGCPGRRAVA
Trigger: GGCTACTGCTCGTCTTCCTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACAGTAATTTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442696.6
CDS GCA 90 bp AGAAGGTTAGTTCGGCGTCTGGGCGGAGCAGCTGGAACATTATTCTaGTGCTGGATTAAGGAAGCCCTCTCCCGTGTCCTCCACAGCCCC +
Preference number: 5 (lower is better)
Translates to: RRLVRRLGGAAGTLF*CWIKEALSRVLHSP
Trigger: GGGGCTGTGGAGGACACGGGAGAGGGCTTCCTTAATCCAGCAGCAGAATAATGTTCCAGCTGCTCCGCCCAGACGCCGAACTAACCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CCA 90 bp AGAACTGGAAAGGCACGGGACAAGTGGTCAGCAAGGAGGGGTGGGTaGGAGGGGTCCGTCTGTCCATCTTTACTTCTCCAGCCACACTGT +
Preference number: 5 (lower is better)
Translates to: RTGKARDKWSARRGG*EGSVCPSLLLQPHC
Trigger: ACAGTGTGGCTGGAGAAGTAAAGATGGACAGACGGACCCCTCCCACCCACCCCTCCTTGCTGACCACTTGTCCCGTGCCTTTCCAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512368.5
ENST00000514636.1
CDS-3UTR CAA 90 bp AGGAAGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTGCGGCGCTGAGGGCTaGCCCATCTTCACCCAAAGG +
Preference number: 5 (lower is better)
Translates to: RKPTFSCEPNSSEEYGRPCGAEG*PIFTQR
Trigger: CCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCA...AGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS-3UTR CAA 90 bp CAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCTGGCAGATGCCCACGTCCTaGTTACTGCTCAGTATCCAG +
Preference number: 5 (lower is better)
Translates to: QGKCEFSTAGLVTLLCLWQMPTS*LLLSIQ
Trigger: CTGGATACTGAGCAGTAACAAGGACGTGGGCATCTG...CCAGAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS GCA 90 bp AGGTTAGTTCGGCGTCTGGGCGGAGCAGCTGGAACATTATTCTGCTaGTGGATTAAGGAAGCCCTCTCCCGTGTCCTCCACAGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: RLVRRLGGAAGTLFC*WIKEALSRVLHSPK
Trigger: TTTGGGGCTGTGGAGGACACGGGAGAGGGCTTCCTTAATCCAGCAGCAGAATAATGTTCCAGCTGCTCCGCCCAGACGCCGAACTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CCA 90 bp TTAGTTCGGCGTCTGGGCGGAGCAGCTGGAACATTATTCTGCTGCTaGATTAAGGAAGCCCTCTCCCGTGTCCTCCACAGCCCCAAAACC +
Preference number: 5 (lower is better)
Translates to: LVRRLGGAAGTLFCC*IKEALSRVLHSPKT
Trigger: GGTTTTGGGGCTGTGGAGGACACGGGAGAGGGCTTCCTTAATCCAGCAGCAGAATAATGTTCCAGCTGCTCCGCCCAGACGCCGAACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS-3UTR CAA 90 bp TGGGACTCCGTCTGGATCCGGGATTCGTTGGAGGCCAGGAACTCCACAGCTCGGGAGCTGCTGGTCACATaGGCTATATATTCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: WDSVWIRDSLEARNSTARELLVT*AIYSWA
Trigger: AGCCCAAGAATATATAGCCAATGTGACCAGCAGCTC...CCGAGCTGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCAGACGGAGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421671.6
CDS-3UTR CAA 90 bp AGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAGTGCGGCTTCAAACTaGGCGGAGGAGCTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: SPHFPASRTPLKSMADLWSAASN*AEELLV
Trigger: GACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACT...CCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp CAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTACAGATGCCCACGTCCTaGTTACTGCTCAGTATCCAG +
Preference number: 5 (lower is better)
Translates to: QHNRAESGLSPWLLPLPLQMPTS*LLLSIQ
Trigger: CTGGATACTGAGCAGTAACAAGGACGTGGGCATCTG...TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp TGTGGAATTTCCTGTTTGCTCCCCCTCTCCTGCCTGCCGCAGATGAGGACACACTCCAGGCAGACCACCTaGTCCACAGTCGTCACCAAT +
Preference number: 5 (lower is better)
Translates to: CGISCLLPLSCLPQMRTHSRQTT*STVVTN
Trigger: ATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGGA...GTGTGTCCTCATCTGCGGCAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CAA 90 bp CCAAGAGCCGCGGCCGGGGTAACAGAAACGCCGGCTGCGCTGAAGTTCTTGTTAAAGAAGATGAGCACGTaGGTGACAGCAGTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: PRAAAGVTETPAALKFLLKKMST*VTAVSK
Trigger: CTTGCTCACTGCTGTCACCAACGTGCTCATCTTCTT...TAACAAGAACTTCAGCGCAGCCGGCGTTTCTGTTACCCCGGCCGCGGCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CAA 90 bp TGGCTTCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCTGGATCCGGGATTCGTaGGAGGCCAGGAACTCCACA +
Preference number: 5 (lower is better)
Translates to: WLLPLPLKEAHIFLRAELWIRDS*EARNST
Trigger: TGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCA...GAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp AGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAG +
Preference number: 5 (lower is better)
Translates to: SQGKCEFSTAGLVTLLCLEYGRP*ESCQDE
Trigger: CTCGTCCTGACACGATTCCAAAGGTCTGCCATACTC...GAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS GCA 90 bp CAACCAGATGCCCACGTCCTTGTTACTGCTCAGTATCCAGGTCAGTaGGGCTTCAAACTTGGCGGAGGAGCTGCTGGTCACATTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QPDAHVLVTAQYPGQ*GFKLGGGAAGHILW
Trigger: CCACAGAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS GCA 90 bp CAGCTAGGTGACCCAGGGCGAGAATATCATGCTCTTGAGGCTGCATaGTGGAATGGCTGGCATCCCAAGTGTCCTGATTTCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: QLGDPGREYHALEAA*WNGWHPKCPDFSGP
Trigger: GGGTCCTGAGAAATCAGGACACTTGGGATGCCAGCCATTCCAGCATGCAGCCTCAAGAGCATGATATTCTCGCCCTGGGTCACCTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 90 bp TTGTTTGATGAAATGGCCCCAGATTTGGTGACCTGCCATAGCCCTTaGTCCTCGCTCCTGTGCTGTGGTTTGCCTGACTCCCCGAGAGCA +
Preference number: 5 (lower is better)
Translates to: LFDEMAPDLVTCHSP*SSLLCCGLPDSPRA
Trigger: TGCTCTCGGGGAGTCAGGCAAACCACAGCACAGGAGCGAGGACCAAGGGCTATGGCAGGTCACCAAATCTGGGGCCATTTCATCAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS-3UTR CAA 90 bp ACAGCCCCGCGTCGGGGCTGTGGTCACAGTAAAGCAAGGCGATCTTCGCACACAGAGCTGCTGGTCACATaGGCTATATATTCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: TAPRRGCGHSKARRSSHTELLVT*AIYSWA
Trigger: AGCCCAAGAATATATAGCCAATGTGACCAGCAGCTC...TGTGTGCGAAGATCGCCTTGCTTTACTGTGACCACAGCCCCGACGCGGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CAA 90 bp TGGCTTCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCTCCAGGCAGACCACCTaGTCCACAGTCGTCACCAAT +
Preference number: 5 (lower is better)
Translates to: WLLPLPLKEAHIFLRAELSRQTT*STVVTN
Trigger: ATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGGA...GAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp AACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATTCCAGGCAGACCACCTaGTCCACAGTCGTCACCAAT +
Preference number: 5 (lower is better)
Translates to: NSTLLPVSASTTGQSLGYSRQTT*STVVTN
Trigger: ATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGGA...ATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS GCA 90 bp TCACCAGATGCCCACGTCCTTGTTACTGCTCAGTATCCAGGTCAGTaGGGCTTCAAACTTGGCGGAGGAGCTGCTGGTCACATTGGCTAT +
Preference number: 5 (lower is better)
Translates to: SPDAHVLVTAQYPGQ*GFKLGGGAAGHIGY
Trigger: ATAGCCAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS CCA 90 bp CTAGGTGACCCAGGGCGAGAATATCATGCTCTTGAGGCTGCATGCTaGAATGGCTGGCATCCCAAGTGTCCTGATTTCTCAGGACCCACT +
Preference number: 5 (lower is better)
Translates to: LGDPGREYHALEAAC*NGWHPKCPDFSGPT
Trigger: AGTGGGTCCTGAGAAATCAGGACACTTGGGATGCCAGCCATTCCAGCATGCAGCCTCAAGAGCATGATATTCTCGCCCTGGGTCACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS-3UTR CAA 90 bp CAGCACAACAGGGCAGAGTCTGGGCTATCACCCTGGCTTCTCCCCCTCCCTTTAGAGCTGCTGGTCACATaGGCTATATATTCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: QHNRAESGLSPWLLPLPLELLVT*AIYSWA
Trigger: AGCCCAAGAATATATAGCCAATGTGACCAGCAGCTC...TAAAGGGAGGGGGAGAAGCCAGGGTGATAGCCCAGACTCTGCCCTGTTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp GAAGAGTATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAGTGCGGCTTCAAACTaGGCGGAGGAGCTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: EEYGRPLESCQDETESQGSAASN*AEELLV
Trigger: GACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACT...GCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCATACTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp AGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGTCCAGGCAGACCACCTaGTCCACAGTCGTCACCAAT +
Preference number: 5 (lower is better)
Translates to: SPHFPASRTPLKSMADLWSRQTT*STVVTN
Trigger: ATTGGTGACGACTGTGGACAAGGTGGTCTGCCTGGA...CCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp TCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCACAAGAAGATGAGCACGTaGGTGACAGCAGTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: STLLPVSASTTGQSLGYHKKMST*VTAVSK
Trigger: CTTGCTCACTGCTGTCACCAACGTGCTCATCTTCTT...GTGATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp GAGACTGAAAGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAG +
Preference number: 5 (lower is better)
Translates to: ETESQGKCEFSTAGLVTLEYGRP*ESCQDE
Trigger: CTCGTCCTGACACGATTCCAAAGGTCTGCCATACTC...GAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACTTTCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp GGGGTGGTTAATGTTTCTGGAGGCAGCTGTGGAATTTCCTGTTTGCTCCCCCTCTGTGGAATTTCCTGTTaGCTCCCCCTCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GVVNVSGGSCGISCLLPLCGISC*LPLSCL
Trigger: CAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCACA...GAGGGGGAGCAAACAGGAAATTCCACAGCTGCCTCCAGAAACATTAACCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS GCA 90 bp GCATGTTGCCCAGCGGCTCCTGGCTTCTGTGGGGCATCTTCACTCTaGAGCAAGATCAAAAGCCACTTAGCTTGGATCGATTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: ACCPAAPGFCGASSL*SKIKSHLAWIDSRS
Trigger: TGATCTGGAATCGATCCAAGCTAAGTGGCTTTTGATCTTGCTGCAGAGTGAAGATGCCCCACAGAAGCCAGGAGCCGCTGGGCAACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000513832.5
CDS-3UTR CAA 90 bp ATGGCAGACCTTTGGAATCGTGTCAGGACGAGACTGAAAGTCAAGGCAAGTGTGGCTGCGCTGAAGTTCTaGTTAAACAGCCCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: MADLWNRVRTRLKVKASVAALKF*LNSPAS
Trigger: CGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGC...CACACTTGCCTTGACTTTCAGTCTCGTCCTGACACGATTCCAAAGGTCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS TCA 90 bp TCAGACTGGTCTTCTCCTTTCAACCTGAAACAGGACACAGGGCTCTaGACATGTTGGAAAGCTCCAAGGAGAGGCAGTGCAAGCCCCACT +
Preference number: 5 (lower is better)
Translates to: SDWSSPFNLKQDTGL*TCWKAPRRGSASPT
Trigger: AGTGGGGCTTGCACTGCCTCTCCTTGGAGCTTTCCAACATGTTCAGAGCCCTGTGTCCTGTTTCAGGTTGAAAGGAGAAGACCAGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 90 bp TCAGCTCTAATAAGGAGCATGTTGCCCAGCGGCTCCTGGCTTCTGTaGGGCATCTTCACTCTGCAGCAAGATCAAAAGCCACTTAGCTTG +
Preference number: 5 (lower is better)
Translates to: SALIRSMLPSGSWLL*GIFTLQQDQKPLSL
Trigger: CAAGCTAAGTGGCTTTTGATCTTGCTGCAGAGTGAAGATGCCCCACAGAAGCCAGGAGCCGCTGGGCAACATGCTCCTTATTAGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000513832.5
CDS CCA 90 bp ATCAAGCCATCAGCTCTAATAAGGAGCATGTTGCCCAGCGGCTCCTaGCTTCTGTGGGGCATCTTCACTCTGCAGCAAGATCAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: IKPSALIRSMLPSGS*LLWGIFTLQQDQKP
Trigger: TGGCTTTTGATCTTGCTGCAGAGTGAAGATGCCCCACAGAAGCCAGGAGCCGCTGGGCAACATGCTCCTTATTAGAGCTGATGGCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000513832.5
CDS-3UTR CAA 90 bp CTCCTGCCTGCCGCAGATGAGGACACACGGGGAAGACTCGCTGGAGAGGCTTCTATTGGCTATATATTCTaGGGCTTCCATAACAGGAAT +
Preference number: 5 (lower is better)
Translates to: LLPAADEDTRGRLAGEASIGYIF*GFHNRN
Trigger: ATTCCTGTTATGGAAGCCCAAGAATATATAGCCAAT...AGAAGCCTCTCCAGCGAGTCTTCCCCGTGTGTCCTCATCTGCGGCAGGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CAA 90 bp AGCCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAAGAAGATGAGCACGTaGGTGACAGCAGTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: SPHFPASRTPLKSMADLWKKMST*VTAVSK
Trigger: CTTGCTCACTGCTGTCACCAACGTGCTCATCTTCTT...CCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp CCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAAGAGTATGGCAGACCTTaGGAATCGTGTCAGGACGAG +
Preference number: 5 (lower is better)
Translates to: PTFSCEPNSSEEYGRPLEEYGRP*ESCQDE
Trigger: CTCGTCCTGACACGATTCCAAAGGTCTGCCATACTC...TTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp CCCCTACAGTCACTTGTTCTAATTTCTAGCACCTTCCCTCTTCAGGATAGAGGCGCTGCGCTGAAGTTCTaGTTAAACAGCCCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: PLQSLVLISSTFPLQDRGAALKF*LNSPAS
Trigger: CGACGCGGGGCTGTTTAACAAGAACTTCAGCGCAGC...GCCTCTATCCTGAAGAGGGAAGGTGCTAGAAATTAGAACAAGTGACTGTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CAA 90 bp CATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTTGTGGAATTTCCTGTTaGCTCCCCCTCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: HFPASRTPLKSMADLWNRCGISC*LPLSCL
Trigger: CAGGCAGGAGAGGGGGAGCAAACAGGAAATTCCACA...ACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CAA 90 bp AGTCAAGGCAAGTGTGAATTCAGCACCGCAGGCCTGGTGACCCTCCTGTGCCTCGACTACTCACAACATTaGGAGGGAGTAAAGCATTAC +
Preference number: 5 (lower is better)
Translates to: SQGKCEFSTAGLVTLLCLDYSQH*EGVKHY
Trigger: GTAATGCTTTACTCCCTCCAAATGTTGTGAGTAGTC...GAGGCACAGGAGGGTCACCAGGCCTGCGGTGCTGAATTCACACTTGCCTTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508327.5
CDS GCA 90 bp CACTTTCAATATGGTCATCCTGAGCGGCTCTGCCACCCTCCAGGCTaGCTTCCCCAACATGAAAAGGTGAGTGTCATCATTCTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: HFQYGHPERLCHPPG*LPQHEKVSVIILLC
Trigger: ACACAGAAGAATGATGACACTCACCTTTTCATGTTGGGGAAGGCAGCCTGGAGGGTGGCAGAGCCGCTCAGGATGACCATATTGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 90 bp CCAGGGCGAGAATATCATGCTCTTGAGGCTGCATGCTGGAATGGCTaGCATCCCAAGTGTCCTGATTTCTCAGGACCCACTTTCAATATG +
Preference number: 5 (lower is better)
Translates to: PGREYHALEAACWNG*HPKCPDFSGPTFNM
Trigger: CATATTGAAAGTGGGTCCTGAGAAATCAGGACACTTGGGATGCCAGCCATTCCAGCATGCAGCCTCAAGAGCATGATATTCTCGCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS-3UTR CAA 90 bp ACTCAACCCTTCTCCCCGTTTCTGCCAGCACAACAGGGCAGAGTCTGGGCTATCCTCAAAATTACCAGCTaGGATGGCCAGGAAATTGTA +
Preference number: 5 (lower is better)
Translates to: TQPFSPFLPAQQGRVWAILKITS*DGQEIV
Trigger: TACAATTTCCTGGCCATCCAAGCTGGTAATTTTGAG...GATAGCCCAGACTCTGCCCTGTTGTGCTGGCAGAAACGGGGAGAAGGGTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp ACAGCCCCGCGTCGGGGCTGTGGTCACAGTAAAGCAAGGCGATCTTCGCACACAATTGGCTATATATTCTaGGGCTTCCATAACAGGAAT +
Preference number: 5 (lower is better)
Translates to: TAPRRGCGHSKARRSSHTIGYIF*GFHNRN
Trigger: ATTCCTGTTATGGAAGCCCAAGAATATATAGCCAAT...TGTGTGCGAAGATCGCCTTGCTTTACTGTGACCACAGCCCCGACGCGGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CAA 90 bp AAAGCAAGGCGATCTTCGCACACAGCAAGTGCGAGGCTCTGGGCCCTGACGCAGATTGGCTATATATTCTaGGGCTTCCATAACAGGAAT +
Preference number: 5 (lower is better)
Translates to: KARRSSHTASARLWALTQIGYIF*GFHNRN
Trigger: ATTCCTGTTATGGAAGCCCAAGAATATATAGCCAAT...CTGCGTCAGGGCCCAGAGCCTCGCACTTGCTGTGTGCGAAGATCGCCTTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS-3UTR CAA 90 bp CCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAAAAGAAGATGAGCACGTaGGTGACAGCAGTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: PTFSCEPNSSEEYGRPLEKKMST*VTAVSK
Trigger: CTTGCTCACTGCTGTCACCAACGTGCTCATCTTCTT...TTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS TCA 90 bp GTGCTGGGCCTAGGGAGAGAGTTGATAAATATTGGGTTAACTGCCTaGGAAAGACCCTGGAGAAGCAGAGGCAAAGCTGAAAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: VLGLGRELINIGLTA*ERPWRSRGKAESRH
Trigger: GTGTCTGCTTTCAGCTTTGCCTCTGCTTCTCCAGGGTCTTTCTCAGGCAGTTAACCCAATATTTATCAACTCTCTCCCTAGGCCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512368.5
CDS-3UTR CAA 90 bp CCCACATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAAGAGCTGCTGGTCACATaGGCTATATATTCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: PTFSCEPNSSEEYGRPLEELLVT*AIYSWA
Trigger: AGCCCAAGAATATATAGCCAATGTGACCAGCAGCTC...TTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp CATCCAGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTTGGATCCGGGATTCGTaGGAGGCCAGGAACTCCACA +
Preference number: 5 (lower is better)
Translates to: HPAVSALILKPVAVFLIFWIRDS*EARNST
Trigger: TGTGGAGTTCCTGGCCTCCAACGAATCCCGGATCCA...AAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCTGGATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000506578.5
ENST00000614475.4
CDS-3UTR CAA 90 bp CTTTCATATGTCTTTTCTAGCTCATCCTGCCATAAAGAGCCGAGCATGCTGGGGAAGAAGATGAGCACGTaGGTGACAGCAGTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: LSYVFSSSSCHKEPSMLGKKMST*VTAVSK
Trigger: CTTGCTCACTGCTGTCACCAACGTGCTCATCTTCTT...CCCCAGCATGCTCGGCTCTTTATGGCAGGATGAGCTAGAAAAGACATATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS CCA 90 bp AAAATTCTGCCAAGTGCTGGGCCTAGGGAGAGAGTTGATAAATATTaGGTTAACTGCCTGAGAAAGACCCTGGAGAAGCAGAGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: KILPSAGPRERVDKY*VNCLRKTLEKQRQS
Trigger: GCTTTGCCTCTGCTTCTCCAGGGTCTTTCTCAGGCAGTTAACCCAATATTTATCAACTCTCTCCCTAGGCCCAGCACTTGGCAGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512368.5
CDS-3UTR CAA 90 bp TGGCTTCTCCCCCTCCCTTTAAAGGAAGCCCACATTTTCCTGCGAGCCGAACTCATTGGCTATATATTCTaGGGCTTCCATAACAGGAAT +
Preference number: 5 (lower is better)
Translates to: WLLPLPLKEAHIFLRAELIGYIF*GFHNRN
Trigger: ATTCCTGTTATGGAAGCCCAAGAATATATAGCCAAT...GAGTTCGGCTCGCAGGAAAATGTGGGCTTCCTTTAAAGGGAGGGGGAGAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS-3UTR CAA 90 bp ACTGAGGAGATCCTTCACTACTTGTGCCCTGGGGGAGGGAGCTGCTATTACTTGTACAGAGGTGTGGGATaGTGCTTTCATATGTCTTTT +
Preference number: 5 (lower is better)
Translates to: TEEILHYLCPGGGSCYYLYRGVG*CFHMSF
Trigger: AAAAGACATATGAAAGCACAATCCCACACCTCTGTA...CAAGTAATAGCAGCTCCCTCCCCCAGGGCACAAGTAGTGAAGGATCTCCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504692.1
CDS CCA 90 bp ATCACTAGCTTTGCAATTGCATGGCAAGAACTGAAAGACAGAATCTaGGAGGTTGCACTTTTCCTCGGTGACAAGGAGGCACATAAGCTG +
Preference number: 5 (lower is better)
Translates to: ITSFAIAWQELKDRI*EVALFLGDKEAHKL
Trigger: CAGCTTATGTGCCTCCTTGTCACCGAGGAAAAGTGCAACCTCCCAGATTCTGTCTTTCAGTTCTTGCCATGCAATTGCAAAGCTAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS-3UTR CAA 90 bp CATTTTCCTGCGAGCCGAACTCCTCTGAAGAGTATGGCAGACCTTTGGAATCGTCTCAAAATTACCAGCTaGGATGGCCAGGAAATTGTA +
Preference number: 5 (lower is better)
Translates to: HFPASRTPLKSMADLWNRLKITS*DGQEIV
Trigger: TACAATTTCCTGGCCATCCAAGCTGGTAATTTTGAG...ACGATTCCAAAGGTCTGCCATACTCTTCAGAGGAGTTCGGCTCGCAGGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000508327.5
ENST00000614475.4
CDS TCA 90 bp CAGAAAAATGCCTTCCCCAACAAACCATGTGGTGTTGTTGATGAATaGGAAAGGCACAGACTGAGTTACCTGAGACAGGATTTAGCTGGA +
Preference number: 5 (lower is better)
Translates to: QKNAFPNKPCGVVDE*ERHRLSYLRQDLAG
Trigger: TCCAGCTAAATCCTGTCTCAGGTAACTCAGTCTGTGCCTTTCTCATTCATCAACAACACCACATGGTTTGTTGGGGAAGGCATTTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS-3UTR CAA 90 bp AGCAGTTTCAGCCCTGATACTGAAGCCTGTTGCGGTGTTTCTTATTTTTCTGGCCTCAAAATTACCAGCTaGGATGGCCAGGAAATTGTA +
Preference number: 5 (lower is better)
Translates to: SSFSPDTEACCGVSYFSGLKITS*DGQEIV
Trigger: TACAATTTCCTGGCCATCCAAGCTGGTAATTTTGAG...GCCAGAAAAATAAGAAACACCGCAACAGGCTTCAGTATCAGGGCTGAAACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS TCA 90 bp GAACACCAGGCTAACATCCTAACACCTGGATTTTGTGTCTCATCTTaGAGCTGCTCCTTACACTGCATTCCAAATGCTTCTTGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: EHQANILTPGFCVSS*SCSLHCIPNASCFC
Trigger: ACAAAAGCAAGAAGCATTTGGAATGCAGTGTAAGGAGCAGCTTCAAGATGAGACACAAAATCCAGGTGTTAGGATGTTAGCCTGGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS TCA 90 bp GAAATGTTTACTGAATCACTAGCTTTGCAATTGCATGGCAAGAACTaGAAGACAGAATCTGGGAGGTTGCACTTTTCCTCGGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: EMFTESLALQLHGKN*KTESGRLHFSSVTR
Trigger: CCTTGTCACCGAGGAAAAGTGCAACCTCCCAGATTCTGTCTTTCAGTTCTTGCCATGCAATTGCAAAGCTAGTGATTCAGTAAACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 72 bp GTGTCGGTGATGGGTCCTGGCTGGAAGCCCAGGGCCTaGAGCTCCCGCCGCAGTTCCAGGTCCGACAGGCCG +
Preference number: 6 (lower is better)
Translates to: VSVMGPGWKPRA*SSRRSSRSDRP
Trigger: CGGCCTGTCGGACCTGGAACTGCGGCGGGAGCTGCAGGCCCTGGGCTTCCAGCCAGGACCCATCACCGACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS CCA 72 bp GCGGTAGACATCCCGGGTGGTGTCGGTGATGGGTCCTaGCTGGAAGCCCAGGGCCTGCAGCTCCCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: AVDIPGGVGDGS*LEAQGLQLPPQ
Trigger: CTGCGGCGGGAGCTGCAGGCCCTGGGCTTCCAGCCAGGACCCATCACCGACACCACCCGGGATGTCTACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293760.10
ENST00000421671.6
ENST00000614475.4
CDS CCA 72 bp CACAGCACGCCAAGGGGCAGCTCCCCCGAGTGGCTTTaGAGGCCTGCTCCCATAGGATGGAGCTGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: HSTPRGSSPEWL*RPAPIGWSWQP
Trigger: AGGCTGCCAGCTCCATCCTATGGGAGCAGGCCTCCAAAGCCACTCGGGGGAGCTGCCCCTTGGCGTGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 72 bp CCTCAGCACAGCACGCCAAGGGGCAGCTCCCCCGAGTaGCTTTGGAGGCCTGCTCCCATAGGATGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PQHSTPRGSSPE*LWRPAPIGWSW
Trigger: CCAGCTCCATCCTATGGGAGCAGGCCTCCAAAGCCACTCGGGGGAGCTGCCCCTTGGCGTGCTGTGCTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CAA 90 bp TTGGTGACCTGCCATAGCCCTTGGTCCTCGCTCCTGTGCTGTGGTTaGCCTGACTCCCCGAGAGCAGGGAGGGTGCAGGGCCACGCACGC +
Preference number: 6 (lower is better)
Translates to: LVTCHSPWSSLLCCG*PDSPRAGRVQGHAR
Trigger: GCGTGCGTGGCCCTGCACCCTCCCTGCTCTCGGGGAGTCAGGCAAACCACAGCACAGGAGCGAGGACCAAGGGCTATGGCAGGTCACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 72 bp GCCAAGGGGCAGCTCCCCCGAGTGGCTTTGGAGGCCTaGTCCCATAGGATGGAGCTGGCAGCCTCCCACTTA +
Preference number: 6 (lower is better)
Translates to: AKGQLPRVALEA*SHRMELAASHL
Trigger: TAAGTGGGAGGCTGCCAGCTCCATCCTATGGGAGCAGGCCTCCAAAGCCACTCGGGGGAGCTGCCCCTTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 72 bp CTGACGAGCGAGGACAGTGGTTGCAGGCACCCATGCTaGGTCGCCACCCTGCCCACACTCACCAGATGCCCA +
Preference number: 6 (lower is better)
Translates to: LTSEDSGCRHPC*VATLPTLTRCP
Trigger: TGGGCATCTGGTGAGTGTGGGCAGGGTGGCGACGCAGCATGGGTGCCTGCAACCACTGTCCTCGCTCGTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS CCA 72 bp ACTGCCCTGACCCAGCACAGCCTGGGGGACTTCGGGTaGCCAGTGAGTGTGTTTCTGCATGCTGGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: TALTQHSLGDFG*PVSVFLHAGEG
Trigger: CCCTTCCCCAGCATGCAGAAACACACTCACTGGCCACCCGAAGTCCCCCAGGCTGTGCTGGGTCAGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 72 bp TTGGTGACCTGCCATAGCCCTTGGTCCTCGCTCCTGTaGTGTGGTTTGCCTGACTCCCCGAGAGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: LVTCHSPWSSLL*CGLPDSPRAGR
Trigger: CCTCCCTGCTCTCGGGGAGTCAGGCAAACCACAGCACAGGAGCGAGGACCAAGGGCTATGGCAGGTCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 72 bp TCATGTTGTCCTCCGCCTCCTGCGGCGCTGAGGGCTTaGCCATCTTCACCCAAAGGATGCCCAGGAAGACGA +
Preference number: 6 (lower is better)
Translates to: SCCPPPPAALRA*PSSPKGCPGRR
Trigger: TCGTCTTCCTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS GCA 72 bp TACTGTTGTCCTCCGCCTCCTGCGGCGCTGAGGGCTTaGCCATCTTCACCCAAAGGATGCCCAGGAAGACGA +
Preference number: 6 (lower is better)
Translates to: YCCPPPPAALRA*PSSPKGCPGRR
Trigger: TCGTCTTCCTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442696.6
CDS GCA 72 bp ACAGTGGTTGCAGGCACCCATGCTGCGTCGCCACCCTaGCCACACTCACCAGATGCCCACGTCCTTGTTACT +
Preference number: 6 (lower is better)
Translates to: TVVAGTHAASPP*PHSPDAHVLVT
Trigger: AGTAACAAGGACGTGGGCATCTGGTGAGTGTGGGCAGGGTGGCGACGCAGCATGGGTGCCTGCAACCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS CAA 72 bp TTCATGTTGTCCTCCGCCTCCTGCGGCGCTGAGGGCTaGCCCATCTTCACCCAAAGGATGCCCAGGAAGACG +
Preference number: 6 (lower is better)
Translates to: FMLSSASCGAEG*PIFTQRMPRKT
Trigger: CGTCTTCCTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS CAA 72 bp TTACTGTTGTCCTCCGCCTCCTGCGGCGCTGAGGGCTaGCCCATCTTCACCCAAAGGATGCCCAGGAAGACG +
Preference number: 6 (lower is better)
Translates to: LLLSSASCGAEG*PIFTQRMPRKT
Trigger: CGTCTTCCTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442696.6
CDS TCA 72 bp GACCTGAGACAGCTCTGTTGGAGCACGGGTGTTAGCTaGCGAGCGAGGACAGTGGTTGCAGGCACCCATGCT +
Preference number: 6 (lower is better)
Translates to: DLRQLCWSTGVS*RARTVVAGTHA
Trigger: AGCATGGGTGCCTGCAACCACTGTCCTCGCTCGTCAGCTAACACCCGTGCTCCAACAGAGCTGTCTCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS GCA 72 bp ACGCATACACTATTTAACACGTGTGCGTGGCCTGACTaGCCTGACCCAGCACAGCCTGGGGGACTTCGGGTG +
Preference number: 6 (lower is better)
Translates to: THTLFNTCAWPD*PDPAQPGGLRV
Trigger: CACCCGAAGTCCCCCAGGCTGTGCTGGGTCAGGGCAGTCAGGCCACGCACACGTGTTAAATAGTGTATGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 72 bp CCATGCTGCGTCGCCACCCTGCCCACACTCACCAGATaGCCACGTCCTTGTTACTGCTCAGTATCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: PCCVATLPTLTR*PRPCYCSVSRS
Trigger: TGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTGAGTGTGGGCAGGGTGGCGACGCAGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS CCA 72 bp AGGTCAGTGCGGCTTCAAACTTGGCGGAGGAGCTGCTaGTCACATTCTGTGGGAGGGCGCGGGAGAAGGTTA +
Preference number: 6 (lower is better)
Translates to: RSVRLQTWRRSC*SHSVGGRGRRL
Trigger: TAACCTTCTCCCGCGCCCTCCCACAGAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CAA 72 bp CGCCACCCTGCCCACACTCACCAGATGCCCACGTCCTaGTTACTGCTCAGTATCCAGGTCAGTGCGGCTTCA +
Preference number: 6 (lower is better)
Translates to: RHPAHTHQMPTS*LLLSIQVSAAS
Trigger: TGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTGAGTGTGGGCAGGGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS CAA 90 bp GGCAATAACTTCATGTTGTCCTCCGCCTCCTGCGGCGCTGAGGGCTaGCCCATCTTCACCCAAAGGATGCCCAGGAAGACGAGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: GNNFMLSSASCGAEG*PIFTQRMPRKTSSS
Trigger: GCTACTGCTCGTCTTCCTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACATGAAGTTATTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS CAA 90 bp ACGTCCTTGTTACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTaGGCGGAGGAGCTGCTGGTCACATTCTGTGGGAGGGCGCGGGAG +
Preference number: 6 (lower is better)
Translates to: TSLLLLSIQVSAASN*AEELLVTFCGRARE
Trigger: CTCCCGCGCCCTCCCACAGAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CAA 90 bp ATGCTGCGTCGCCACCCTGCCCACACTCACCAGATGCCCACGTCCTaGTTACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTTGGCG +
Preference number: 6 (lower is better)
Translates to: MLRRHPAHTHQMPTS*LLLSIQVSAASNLA
Trigger: CGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTGAGTGTGGGCAGGGTGGCGACGCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS CAA 90 bp CACTCAAAATTACTGTTGTCCTCCGCCTCCTGCGGCGCTGAGGGCTaGCCCATCTTCACCCAAAGGATGCCCAGGAAGACGAGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: HSKLLLSSASCGAEG*PIFTQRMPRKTSSS
Trigger: GCTACTGCTCGTCTTCCTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACAGTAATTTTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442696.6
CDS CAA 90 bp GTGGCTTCTAGCATCCTCCTTTTCCCACTAGGACTCTTCCTGCCCTaGCCAGGCCTGCCTGGACCACGTAGATGGCCTCTCGATTCGGTT +
Preference number: 6 (lower is better)
Translates to: VASSILLFPLGLFLP*PGLPGPRRWPLDSV
Trigger: AACCGAATCGAGAGGCCATCTACGTGGTCCAGGCAGGCCTGGCAAGGGCAGGAAGAGTCCTAGTGGGAAAAGGAGGATGCTAGAAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS TCA 72 bp CTCAAAATTACTGTTGTCCTCCGCCTCCTGCGGCGCTaGGGGCTTGCCCATCTTCACCCAAAGGATGCCCAG +
Preference number: 6 (lower is better)
Translates to: LKITVVLRLLRR*GLAHLHPKDAQ
Trigger: CTGGGCATCCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACAGTAATTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442696.6
CDS GCA 72 bp TCCACTGGCAATAACTTCATGTTGTCCTCCGCCTCCTaGGGCGCTGAGGGCTTGCCCATCTTCACCCAAAGG +
Preference number: 6 (lower is better)
Translates to: STGNNFMLSSAS*GAEGLPIFTQR
Trigger: CCTTTGGGTGAAGATGGGCAAGCCCTCAGCGCCGCAGGAGGCGGAGGACAACATGAAGTTATTGCCAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293760.10
ENST00000614475.4
CDS GCA 72 bp GTTCGGCGTCTGGGCGGAGCAGCTGGAACATTATTCTaGTGCTGGATTAAGGAAGCCCTCTCCCGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: VRRLGGAAGTLF*CWIKEALSRVL
Trigger: GAGGACACGGGAGAGGGCTTCCTTAATCCAGCAGCAGAATAATGTTCCAGCTGCTCCGCCCAGACGCCGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CCA 72 bp CGTCTGGGCGGAGCAGCTGGAACATTATTCTGCTGCTaGATTAAGGAAGCCCTCTCCCGTGTCCTCCACAGC +
Preference number: 6 (lower is better)
Translates to: RLGGAAGTLFCC*IKEALSRVLHS
Trigger: GCTGTGGAGGACACGGGAGAGGGCTTCCTTAATCCAGCAGCAGAATAATGTTCCAGCTGCTCCGCCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CCA 72 bp TACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTTaGCGGAGGAGCTGCTGGTCACATTCTGTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: YCSVSRSVRLQT*RRSCWSHSVGG
Trigger: CCCTCCCACAGAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS CCA 72 bp TTAATCGTGCCATGCATCCAGTTATCCAGCTTGAGGTaGAGCTGCCCGAGGGGCTTCTGCTGGATGCAGTGC +
Preference number: 6 (lower is better)
Translates to: LIVPCIQLSSLR*SCPRGFCWMQC
Trigger: GCACTGCATCCAGCAGAAGCCCCTCGGGCAGCTCCACCTCAAGCTGGATAACTGGATGCATGGCACGATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 72 bp CTGCCCACACTCACCAGATGCCCACGTCCTTGTTACTaGTCAGTATCCAGGTCAGTGCGGCTTCAAACTTGG +
Preference number: 6 (lower is better)
Translates to: LPTLTRCPRPCY*SVSRSVRLQTW
Trigger: CCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAACAAGGACGTGGGCATCTGGTGAGTGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000514636.1
CDS CAA 72 bp TTACTGCTCAGTATCCAGGTCAGTGCGGCTTCAAACTaGGCGGAGGAGCTGCTGGTCACATTCTGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: LLLSIQVSAASN*AEELLVTFCGR
Trigger: CCTCCCACAGAATGTGACCAGCAGCTCCTCCGCCAAGTTTGAAGCCGCACTGACCTGGATACTGAGCAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510598.5
CDS GCA 72 bp TATGGTCATCCTGAGCGGCTCTGCCACCCTCCAGGCTaGCTTCCCCAACATGAAAAGGTGAGTGTCATCATT +
Preference number: 6 (lower is better)
Translates to: YGHPERLCHPPG*LPQHEKVSVII
Trigger: AATGATGACACTCACCTTTTCATGTTGGGGAAGGCAGCCTGGAGGGTGGCAGAGCCGCTCAGGATGACCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 72 bp GACCCAGGGCGAGAATATCATGCTCTTGAGGCTGCATaGTGGAATGGCTGGCATCCCAAGTGTCCTGATTTC +
Preference number: 6 (lower is better)
Translates to: DPGREYHALEAA*WNGWHPKCPDF
Trigger: GAAATCAGGACACTTGGGATGCCAGCCATTCCAGCATGCAGCCTCAAGAGCATGATATTCTCGCCCTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 72 bp ATAAGGAGCATGTTGCCCAGCGGCTCCTGGCTTCTGTaGGGCATCTTCACTCTGCAGCAAGATCAAAAGCCA +
Preference number: 6 (lower is better)
Translates to: IRSMLPSGSWLL*GIFTLQQDQKP
Trigger: TGGCTTTTGATCTTGCTGCAGAGTGAAGATGCCCCACAGAAGCCAGGAGCCGCTGGGCAACATGCTCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000513832.5
CDS CCA 72 bp TCAGCTCTAATAAGGAGCATGTTGCCCAGCGGCTCCTaGCTTCTGTGGGGCATCTTCACTCTGCAGCAAGAT +
Preference number: 6 (lower is better)
Translates to: SALIRSMLPSGS*LLWGIFTLQQD
Trigger: ATCTTGCTGCAGAGTGAAGATGCCCCACAGAAGCCAGGAGCCGCTGGGCAACATGCTCCTTATTAGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000513832.5
CDS CAA 72 bp GCAAGAATCAAGCCATCAGCTCTAATAAGGAGCATGTaGCCCAGCGGCTCCTGGCTTCTGTGGGGCATCTTC +
Preference number: 6 (lower is better)
Translates to: ARIKPSALIRSM*PSGSWLLWGIF
Trigger: GAAGATGCCCCACAGAAGCCAGGAGCCGCTGGGCAACATGCTCCTTATTAGAGCTGATGGCTTGATTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000513832.5
CDS CAA 72 bp CCCCTACCGCTAAAGCAACGTCCCCCTGTCAGGTCTTaGACAGCCTCTCTCAGCATGCAGGAGATTAAACTG +
Preference number: 6 (lower is better)
Translates to: PLPLKQRPPVRS*TASLSMQEIKL
Trigger: CAGTTTAATCTCCTGCATGCTGAGAGAGGCTGTCAAAGACCTGACAGGGGGACGTTGCTTTAGCGGTAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS GCA 72 bp CTTTTGTTTGATGAAATGGCCCCAGATTTGGTGACCTaGCATAGCCCTTGGTCCTCGCTCCTGTGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: LLFDEMAPDLVT*HSPWSSLLCCG
Trigger: ACCACAGCACAGGAGCGAGGACCAAGGGCTATGGCAGGTCACCAAATCTGGGGCCATTTCATCAAACAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 72 bp CCAGGGCGAGAATATCATGCTCTTGAGGCTGCATGCTaGAATGGCTGGCATCCCAAGTGTCCTGATTTCTCA +
Preference number: 6 (lower is better)
Translates to: PGREYHALEAAC*NGWHPKCPDFS
Trigger: TGAGAAATCAGGACACTTGGGATGCCAGCCATTCCAGCATGCAGCCTCAAGAGCATGATATTCTCGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CAA 72 bp CAAATTTTAATCGTGCCATGCATCCAGTTATCCAGCTaGAGGTGGAGCTGCCCGAGGGGCTTCTGCTGGATG +
Preference number: 6 (lower is better)
Translates to: QILIVPCIQLSS*RWSCPRGFCWM
Trigger: CATCCAGCAGAAGCCCCTCGGGCAGCTCCACCTCAAGCTGGATAACTGGATGCATGGCACGATTAAAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CAA 90 bp AAAAATGCAGCAAGAATCAAGCCATCAGCTCTAATAAGGAGCATGTaGCCCAGCGGCTCCTGGCTTCTGTGGGGCATCTTCACTCTGCAG +
Preference number: 6 (lower is better)
Translates to: KNAARIKPSALIRSM*PSGSWLLWGIFTLQ
Trigger: CTGCAGAGTGAAGATGCCCCACAGAAGCCAGGAGCCGCTGGGCAACATGCTCCTTATTAGAGCTGATGGCTTGATTCTTGCTGCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000513832.5
CDS TCA 72 bp GCCACCCTCCAGGCTGCCTTCCCCAACATGAAAAGGTaGGTGTCATCATTCTTCTGTGTTAGCAGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: ATLQAAFPNMKR*VSSFFCVSSFS
Trigger: ACTGAAGCTGCTAACACAGAAGAATGATGACACTCACCTTTTCATGTTGGGGAAGGCAGCCTGGAGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 72 bp CAGACCACCTTGTCCACAGTCGTCACCAATTCAGACTaGTCTTCTCCTTTCAACCTGAAACAGGACACAGGG +
Preference number: 6 (lower is better)
Translates to: QTTLSTVVTNSD*SSPFNLKQDTG
Trigger: CCCTGTGTCCTGTTTCAGGTTGAAAGGAGAAGACCAGTCTGAATTGGTGACGACTGTGGACAAGGTGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS TCA 72 bp TCTTCTCCTTTCAACCTGAAACAGGACACAGGGCTCTaGACATGTTGGAAAGCTCCAAGGAGAGGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: SSPFNLKQDTGL*TCWKAPRRGSA
Trigger: TGCACTGCCTCTCCTTGGAGCTTTCCAACATGTTCAGAGCCCTGTGTCCTGTTTCAGGTTGAAAGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CAA 90 bp TTGAAGCTGCTCCTTACACTGCATTCCAAATGCTTCTTGCTTTTGTaGCCCCACTTCCATCCTAACCCACATGATTCTGCTGGGAGACCC +
Preference number: 6 (lower is better)
Translates to: LKLLLTLHSKCFLLL*PHFHPNPHDSAGRP
Trigger: GGGTCTCCCAGCAGAATCATGTGGGTTAGGATGGAAGTGGGGCAACAAAAGCAAGAAGCATTTGGAATGCAGTGTAAGGAGCAGCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CAA 90 bp ATCTTGAAGCTGCTCCTTACACTGCATTCCAAATGCTTCTTGCTTTaGTTGCCCCACTTCCATCCTAACCCACATGATTCTGCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: ILKLLLTLHSKCFLL*LPHFHPNPHDSAGR
Trigger: TCTCCCAGCAGAATCATGTGGGTTAGGATGGAAGTGGGGCAACAAAAGCAAGAAGCATTTGGAATGCAGTGTAAGGAGCAGCTTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CAA 90 bp AAGGAAAGTGGGGACGCAAGGCCTCTACTTGCTTATAGAATAGGCTaGGTATCCTGGCTGCATTCTTTCCAGAAATTTCCCACATTGGCT +
Preference number: 6 (lower is better)
Translates to: KESGDARPLLAYRIG*VSWLHSFQKFPTLA
Trigger: AGCCAATGTGGGAAATTTCTGGAAAGAATGCAGCCAGGATACCAAGCCTATTCTATAAGCAAGTAGAGGCCTTGCGTCCCCACTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CAA 90 bp ATAGCTGGGTCCTTGTCCCAGCTGAAAATGATTAGCTCAAGTTTCTaGGGCAACTCAACCACTCTGAACCTCTGTCTCCTCGTCTGTAAA +
Preference number: 6 (lower is better)
Translates to: IAGSLSQLKMISSSF*GNSTTLNLCLLVCK
Trigger: TTTACAGACGAGGAGACAGAGGTTCAGAGTGGTTGAGTTGCCCAAGAAACTTGAGCTAATCATTTTCAGCTGGGACAAGGACCCAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513701.1
CDS CCA 72 bp TTTGCAATTGCATGGCAAGAACTGAAAGACAGAATCTaGGAGGTTGCACTTTTCCTCGGTGACAAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: FAIAWQELKDRI*EVALFLGDKEA
Trigger: TGCCTCCTTGTCACCGAGGAAAAGTGCAACCTCCCAGATTCTGTCTTTCAGTTCTTGCCATGCAATTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CAA 72 bp TCCTTGTCCCAGCTGAAAATGATTAGCTCAAGTTTCTaGGGCAACTCAACCACTCTGAACCTCTGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: SLSQLKMISSSF*GNSTTLNLCLL
Trigger: GAGGAGACAGAGGTTCAGAGTGGTTGAGTTGCCCAAGAAACTTGAGCTAATCATTTTCAGCTGGGACAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513701.1
CDS TCA 72 bp CTAGGGAGAGAGTTGATAAATATTGGGTTAACTGCCTaGGAAAGACCCTGGAGAAGCAGAGGCAAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: LGRELINIGLTA*ERPWRSRGKAE
Trigger: TTCAGCTTTGCCTCTGCTTCTCCAGGGTCTTTCTCAGGCAGTTAACCCAATATTTATCAACTCTCTCCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512368.5
CDS TCA 72 bp AACTCTAGAGACGTTTTAATATCAAGAGCTATAACCTaGACAGAGACCCCCACAAACACCGAGAGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: NSRDVLISRAIT*TETPTNTESGK
Trigger: CTTCCCACTCTCGGTGTTTGTGGGGGTCTCTGTTCAGGTTATAGCTCTTGATATTAAAACGTCTCTAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS TCA 72 bp ACTGAATCACTAGCTTTGCAATTGCATGGCAAGAACTaGAAGACAGAATCTGGGAGGTTGCACTTTTCCTCG +
Preference number: 6 (lower is better)
Translates to: TESLALQLHGKN*KTESGRLHFSS
Trigger: CGAGGAAAAGTGCAACCTCCCAGATTCTGTCTTTCAGTTCTTGCCATGCAATTGCAAAGCTAGTGATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 72 bp AGGCCTCTACTTGCTTATAGAATAGGCTTGGTATCCTaGCTGCATTCTTTCCAGAAATTTCCCACATTGGCT +
Preference number: 6 (lower is better)
Translates to: RPLLAYRIGLVS*LHSFQKFPTLA
Trigger: AGCCAATGTGGGAAATTTCTGGAAAGAATGCAGCCAGGATACCAAGCCTATTCTATAAGCAAGTAGAGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS TCA 72 bp GCTAACATCCTAACACCTGGATTTTGTGTCTCATCTTaGAGCTGCTCCTTACACTGCATTCCAAATGCTTCT +
Preference number: 6 (lower is better)
Translates to: ANILTPGFCVSS*SCSLHCIPNAS
Trigger: AGAAGCATTTGGAATGCAGTGTAAGGAGCAGCTTCAAGATGAGACACAAAATCCAGGTGTTAGGATGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511171.5
CDS CCA 72 bp TCTTCACTCTGCAGCAAGATCAAAAGCCACTTAGCTTaGATCGATTCCAGATCATTAAAACCTGACCTGCAA +
Preference number: 6 (lower is better)
Translates to: SSLCSKIKSHLA*IDSRSLKPDLQ
Trigger: TTGCAGGTCAGGTTTTAATGATCTGGAATCGATCCAAGCTAAGTGGCTTTTGATCTTGCTGCAGAGTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000513832.5
CDS CAA 72 bp CCAAATCCTGGATTAGGAATTACGATAGCTGGGTCCTaGTCCCAGCTGAAAATGATTAGCTCAAGTTTCTTG +
Preference number: 6 (lower is better)
Translates to: PNPGLGITIAGS*SQLKMISSSFL
Trigger: CAAGAAACTTGAGCTAATCATTTTCAGCTGGGACAAGGACCCAGCTATCGTAATTCCTAATCCAGGATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513701.1
CDS CAA 72 bp ACTAAAAAGCTGCCCAATAGCAAGGTCTCTTTGCAATaGATCCCTAAAAGAATCAGACAGATAGCTTCGGAA +
Preference number: 6 (lower is better)
Translates to: TKKLPNSKVSLQ*IPKRIRQIASE
Trigger: TTCCGAAGCTATCTGTCTGATTCTTTTAGGGATCAATTGCAAAGAGACCTTGCTATTGGGCAGCTTTTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502643.5
ENST00000511171.5
ENST00000513832.5
CDS CAA 90 bp GTCACATTGGCTATATATTCTTGGGCTTCCATAACAGGAATGCATTaGCTTTTTAGATTCTCTGGATTTCCACACTCAAAATTACCTGCA +
Preference number: 6 (lower is better)
Translates to: VTLAIYSWASITGMH*LFRFSGFPHSKLPA
Trigger: TGCAGGTAATTTTGAGTGTGGAAATCCAGAGAATCTAAAAAGCAAATGCATTCCTGTTATGGAAGCCCAAGAATATATAGCCAATGTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502643.5
CDS CAA 90 bp GTCACATTGGCTATATATTCTTGGGCTTCCATAACAGGAATGCATTaGCTTTTTAGATTCTCTGGATTTCCACACTCAAAATTACCTAGG +
Preference number: 6 (lower is better)
Translates to: VTLAIYSWASITGMH*LFRFSGFPHSKLPR
Trigger: CCTAGGTAATTTTGAGTGTGGAAATCCAGAGAATCTAAAAAGCAAATGCATTCCTGTTATGGAAGCCCAAGAATATATAGCCAATGTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511171.5
ENST00000513832.5