Pregenerated sensors for LEFTY2 (Homo sapiens)
Ensembl gene IDs: ENSG00000143768Ensembl transcript IDs: ENST00000366820.10, ENST00000420304.6
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACGTAAGTGCTTAGGATGGGTGATGGACGGGAAAGACAGGAAATaGAAGGACACAGGGCGAAGGTCACACAGGAGCACTAAATTGGGA | + |
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Preference number: 1 (lower is better) Translates to: SRKCLGWVMDGKDRK*KDTGRRSHRSTKLG Trigger: TCCCAATTTAGTGCTCCTGTGTGACCTTCGCCCTGTGTCCTTCCATTTCCTGTCTTTCCCGTCCATCACCCATCCTAAGCACTTACGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR CCA 90 bp | GCTCAGCATCTGAGCTGCATTATTTACTCACGTAAGTGCTTAGGATaGGTGATGGACGGGAAAGACAGGAAATGGAAGGACACAGGGCGA | + |
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Preference number: 1 (lower is better) Translates to: AQHLSCIIYSRKCLG*VMDGKDRKWKDTGR Trigger: TCGCCCTGTGTCCTTCCATTTCCTGTCTTTCCCGTCCATCACCCATCCTAAGCACTTACGTGAGTAAATAATGCAGCTCAGATGCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR GCA 90 bp | CCTACTAGAGCTCAGCATCTGAGCTGCATTATTTACTCACGTAAGTaGTTAGGATGGGTGATGGACGGGAAAGACAGGAAATGGAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: PTRAQHLSCIIYSRK*LGWVMDGKDRKWKD Trigger: GTCCTTCCATTTCCTGTCTTTCCCGTCCATCACCCATCCTAAGCACTTACGTGAGTAAATAATGCAGCTCAGATGCTGAGCTCTAGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR GCA 90 bp | AGTGAAGAATTTGCCAGAGAACAGAAACTCCCAGCTGAAAATGTGTaGATTGCTCAGCTGTATCTTGTAATCAGCATGCCAGCATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: SEEFAREQKLPAENV*IAQLYLVISMPAFP Trigger: AGGAAATGCTGGCATGCTGATTACAAGATACAGCTGAGCAATGCACACATTTTCAGCTGGGAGTTTCTGTTCTCTGGCAAATTCTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR CCA 90 bp | TGGAAGGACACAGGGCGAAGGTCACACAGGAGCACTAAATTGGGATaGAGTAACTTGCTAAGTATAAAGTTAAGACCTACATTAAGACCA | + |
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Preference number: 1 (lower is better) Translates to: WKDTGRRSHRSTKLG*SNLLSIKLRPTLRP Trigger: TGGTCTTAATGTAGGTCTTAACTTTATACTTAGCAAGTTACTCCATCCCAATTTAGTGCTCCTGTGTGACCTTCGCCCTGTGTCCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCAGGTATCCCAATTCCCTGTCCACTGCCCCCAGCCTGAAGCCCTTCATCCTCGTAAGTGCTTAGGATaGGTGATGGACGGGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: IQVSQFPVHCPQPEALHPRKCLG*VMDGKD Trigger: GTCTTTCCCGTCCATCACCCATCCTAAGCACTTACG...AGGATGAAGGGCTTCAGGCTGGGGGCAGTGGACAGGGAATTGGGATACCTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCTGTCCACTGCCCCCAGCCTCGTAAGTGCTTAGGATaGGTGATGGACGGGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PVRTRIQVSQFPVHCPQPRKCLG*VMDGKD Trigger: GTCTTTCCCGTCCATCACCCATCCTAAGCACTTACG...AGGCTGGGGGCAGTGGACAGGGAATTGGGATACCTGGATTCTGGTTCTGACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGTATCCCAATTCCCTGTCCACTGCCCCCAGCCTGAAGCCCTTCATCCTTTTGTTCCAGACTCAGTaGAGAATTTGCCAGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: SRYPNSLSTAPSLKPFILLFQTQ*RICQRT Trigger: TGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAA...AAGGATGAAGGGCTTCAGGCTGGGGGCAGTGGACAGGGAATTGGGATACCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGTATCCCAATTCCCTGTCCACTGCCCCCAGCCTGAAGCCCTTCATCCTTTACAAAAGTCCAGAATaGGTCAGTATTTGGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SRYPNSLSTAPSLKPFILYKSPE*VSIWGK Trigger: TTTCCCCCAAATACTGACCCATTCTGGACTTTTGTA...AAGGATGAAGGGCTTCAGGCTGGGGGCAGTGGACAGGGAATTGGGATACCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR GCA 90 bp | CCTAGCTTGTGGCCCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCTGTCCAATTTACTCACGTAAGTaGTTAGGATGGGTGATGGAC | + |
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Preference number: 2 (lower is better) Translates to: PSLWPCQNQNPGIPIPCPIYSRK*LGWVMD Trigger: GTCCATCACCCATCCTAAGCACTTACGTGAGTAAAT...TGGACAGGGAATTGGGATACCTGGATTCTGGTTCTGACAGGGCCACAAGCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR GCA 90 bp | AAATGGAAGGACACAGGGCGAAGGTCACACAGGAGCACTAAATTGGGATGGAGTTTAAGACCACCTCTATaGACACGTTCAGTTAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KWKDTGRRSHRSTKLGWSLRPPL*TRSVRG Trigger: CCCTCTAACTGAACGTGTGCATAGAGGTGGTCTTAA...ACTCCATCCCAATTTAGTGCTCCTGTGTGACCTTCGCCCTGTGTCCTTCCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCTCCTTTTTAAGAGGAAATGACGAGCCAAAGCCTTCTGCGTTTGTTAGACTAGAGCTCAGCATCTaGGCTGCATTATTTACTCAC | + |
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Preference number: 2 (lower is better) Translates to: SSSFLRGNDEPKPSAFVRLELSI*AALFTH Trigger: GTGAGTAAATAATGCAGCTCAGATGCTGAGCTCTAG...TCTAACAAACGCAGAAGGCTTTGGCTCGTCATTTCCTCTTAAAAAGGAGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR TCA 90 bp | GGGTATTATTGTTCCAGACTCAGTGAAGAATTTGCCAGAGAACAGAAACTCCCACTAGAGCTCAGCATCTaGGCTGCATTATTTACTCAC | + |
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Preference number: 2 (lower is better) Translates to: GYYCSRLSEEFAREQKLPLELSI*AALFTH Trigger: GTGAGTAAATAATGCAGCTCAGATGCTGAGCTCTAG...TGGGAGTTTCTGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAATAATACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTTTAAGAGGAAATGACGAGCCAAAGCCTTCTGCGTTTGTTAGAGATCCTACAGAAACTCCCAGCTaGAAATGTGTGCATTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SFLRGNDEPKPSAFVRDPTETPS*KCVHCS Trigger: TGAGCAATGCACACATTTTCAGCTGGGAGTTTCTGT...AGGATCTCTAACAAACGCAGAAGGCTTTGGCTCGTCATTTCCTCTTAAAAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR GCA 90 bp | GGGTATTATTGTTCCAGACTCAGTGAAGAATTTGCCAGAGAACAGAAACTCCCATTAAGACCACCTCTATaGACACGTTCAGTTAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GYYCSRLSEEFAREQKLPLRPPL*TRSVRG Trigger: CCCTCTAACTGAACGTGTGCATAGAGGTGGTCTTAA...TGGGAGTTTCTGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAATAATACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCTTCCTCTTAGCACCCTCTCAGGGGAACAGGGGCCTAGGTATGTTTACAAAAGCACTAAATTGGGATaGAGTAACTTGCTAAGTATA | + |
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Preference number: 2 (lower is better) Translates to: ILPLSTLSGEQGPRYVYKSTKLG*SNLLSI Trigger: TATACTTAGCAAGTTACTCCATCCCAATTTAGTGCT...TTTGTAAACATACCTAGGCCCCTGTTCCCCTGAGAGGGTGCTAAGAGGAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR CAA 90 bp | AGGAAATGGAAGGACACAGGGCGAAGGTCACACAGGAGCACTAAATaGGGATGGAGTAACTTGCTAAGTATAAAGTTAAGACCTACATTA | + |
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Preference number: 2 (lower is better) Translates to: RKWKDTGRRSHRSTK*GWSNLLSIKLRPTL Trigger: TAATGTAGGTCTTAACTTTATACTTAGCAAGTTACTCCATCCCAATTTAGTGCTCCTGTGTGACCTTCGCCCTGTGTCCTTCCATTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR GCA 90 bp | GGTATGTTTACAAAAGTCCAGAATGGGTCAGTATTTGGGGGAAATAGAGATTTGATTTACTCACGTAAGTaGTTAGGATGGGTGATGGAC | + |
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Preference number: 2 (lower is better) Translates to: GMFTKVQNGSVFGGNRDLIYSRK*LGWVMD Trigger: GTCCATCACCCATCCTAAGCACTTACGTGAGTAAAT...CAAATCTCTATTTCCCCCAAATACTGACCCATTCTGGACTTTTGTAAACATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR GCA 90 bp | ATAGGGTATTATTGTTCCAGACTCAGTGAAGAATTTGCCAGAGAACAGAAACTCGCTCAGCATCTGAGCTaGATTATTTACTCACGTAAG | + |
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Preference number: 2 (lower is better) Translates to: IGYYCSRLSEEFAREQKLAQHLS*IIYSRK Trigger: CTTACGTGAGTAAATAATGCAGCTCAGATGCTGAGC...GAGTTTCTGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAATAATACCCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCTCCTTTTTAAGAGGAAATGACGAGCCAAAGCCTTCTGCGTTTGTTAGAAGCACTAAATTGGGATaGAGTAACTTGCTAAGTATA | + |
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Preference number: 2 (lower is better) Translates to: SSSFLRGNDEPKPSAFVRSTKLG*SNLLSI Trigger: TATACTTAGCAAGTTACTCCATCCCAATTTAGTGCT...TCTAACAAACGCAGAAGGCTTTGGCTCGTCATTTCCTCTTAAAAAGGAGGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR CCA 72 bp | TGCTTAGGATGGGTGATGGACGGGAAAGACAGGAAATaGAAGGACACAGGGCGAAGGTCACACAGGAGCACT | + |
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Preference number: 3 (lower is better) Translates to: CLGWVMDGKDRK*KDTGRRSHRST Trigger: AGTGCTCCTGTGTGACCTTCGCCCTGTGTCCTTCCATTTCCTGTCTTTCCCGTCCATCACCCATCCTAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR CAA 90 bp | AGAGATCCTAGCTTGTGGCCCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCCACAGGAGCACTAAATaGGGATGGAGTAACTTGCTA | + |
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Preference number: 3 (lower is better) Translates to: RDPSLWPCQNQNPGIPIPHRSTK*GWSNLL Trigger: TAGCAAGTTACTCCATCCCAATTTAGTGCTCCTGTG...GGGAATTGGGATACCTGGATTCTGGTTCTGACAGGGCCACAAGCTAGGATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR GCA 72 bp | GCTCAGCATCTGAGCTGCATTATTTACTCACGTAAGTaGTTAGGATGGGTGATGGACGGGAAAGACAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: AQHLSCIIYSRK*LGWVMDGKDRK Trigger: TTTCCTGTCTTTCCCGTCCATCACCCATCCTAAGCACTTACGTGAGTAAATAATGCAGCTCAGATGCTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR CCA 72 bp | CTGAGCTGCATTATTTACTCACGTAAGTGCTTAGGATaGGTGATGGACGGGAAAGACAGGAAATGGAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LSCIIYSRKCLG*VMDGKDRKWKD Trigger: GTCCTTCCATTTCCTGTCTTTCCCGTCCATCACCCATCCTAAGCACTTACGTGAGTAAATAATGCAGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR GCA 72 bp | ATGCCAGCATTTCCTACTAGAGCTCAGCATCTGAGCTaGATTATTTACTCACGTAAGTGCTTAGGATGGGTG | + |
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Preference number: 3 (lower is better) Translates to: MPAFPTRAQHLS*IIYSRKCLGWV Trigger: CACCCATCCTAAGCACTTACGTGAGTAAATAATGCAGCTCAGATGCTGAGCTCTAGTAGGAAATGCTGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR-3UTR CAA 90 bp | GGGTATTATTGTTCCAGACTCAGTGAAGAATTTGCCAGAGAACAGAAACTCCCACACAGGAGCACTAAATaGGGATGGAGTAACTTGCTA | + |
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Preference number: 3 (lower is better) Translates to: GYYCSRLSEEFAREQKLPHRSTK*GWSNLL Trigger: TAGCAAGTTACTCCATCCCAATTTAGTGCTCCTGTG...TGGGAGTTTCTGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAATAATACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR GCA 72 bp | AGTATAAAGTTAAGACCTACATTAAGACCACCTCTATaGACACGTTCAGTTAGAGGGCTCAATGGATACACC | + |
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Preference number: 3 (lower is better) Translates to: SIKLRPTLRPPL*TRSVRGLNGYT Trigger: GGTGTATCCATTGAGCCCTCTAACTGAACGTGTGCATAGAGGTGGTCTTAATGTAGGTCTTAACTTTATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CCA 90 bp | TCCAGGTATCCCAATTCCCTGTCCACTGCCCCCAGCCTGAAGCCCTTCATCCTTGAGCAGGAGGCAGAGTaGGGCTGTCCTCTAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SRYPNSLSTAPSLKPFILEQEAE*GCPLGR Trigger: CCTCCCTAGAGGACAGCCCCACTCTGCCTCCTGCTC...AAGGATGAAGGGCTTCAGGCTGGGGGCAGTGGACAGGGAATTGGGATACCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CCA 90 bp | CCTAGCTTGTGGCCCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCTGTCCAGAGCAGGAGGCAGAGTaGGGCTGTCCTCTAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSLWPCQNQNPGIPIPCPEQEAE*GCPLGR Trigger: CCTCCCTAGAGGACAGCCCCACTCTGCCTCCTGCTC...TGGACAGGGAATTGGGATACCTGGATTCTGGTTCTGACAGGGCCACAAGCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CCA 90 bp | AAATGGAAGGACACAGGGCGAAGGTCACACAGGAGCACTAAATTGGGATGGAGTGGGAGGTCACACCCCTaGGACCTCCTGGGAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: KWKDTGRRSHRSTKLGWSGRSHP*DLLGAH Trigger: GTGAGCTCCCAGGAGGTCCCAGGGGTGTGACCTCCC...ACTCCATCCCAATTTAGTGCTCCTGTGTGACCTTCGCCCTGTGTCCTTCCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420304.6 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTAAGAGGAAATGACGAGCCAAAGCCTTCTGCGTTTGTTAGAGATCCTGGCCCTGGGCTGGCCTaGGGTGAAGGGAAGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SFLRGNDEPKPSAFVRDPGPGLA*GEGKRE Trigger: CTCCCTCTTCCCTTCACCCCAGGCCAGCCCAGGGCC...AGGATCTCTAACAAACGCAGAAGGCTTTGGCTCGTCATTTCCTCTTAAAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420304.6 |
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| CDS-3UTR TCA 90 bp | CCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCTGTCCACTGCCCCCAGCCTCTAGAGCTCAGCATCTaGGCTGCATTATTTACTCAC | + |
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Preference number: 4 (lower is better) Translates to: PVRTRIQVSQFPVHCPQPLELSI*AALFTH Trigger: GTGAGTAAATAATGCAGCTCAGATGCTGAGCTCTAG...AGGCTGGGGGCAGTGGACAGGGAATTGGGATACCTGGATTCTGGTTCTGACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR TCA 90 bp | AAATGGAAGGACACAGGGCGAAGGTCACACAGGAGCACTAAATTGGGATGGAGTAGACAGTGTGGGAAATaGCCTAAATATGCACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KWKDTGRRSHRSTKLGWSRQCGK*PKYARA Trigger: TGCCCGTGCATATTTAGGTCATTTCCCACACTGTCT...ACTCCATCCCAATTTAGTGCTCCTGTGTGACCTTCGCCCTGTGTCCTTCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR GCA 90 bp | AGGACACAGGGCGAAGGTCACACAGGAGCACTAAATTGGGATGGAGTAACTTGCTTAAGACCACCTCTATaGACACGTTCAGTTAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RTQGEGHTGALNWDGVTCLRPPL*TRSVRG Trigger: CCCTCTAACTGAACGTGTGCATAGAGGTGGTCTTAA...GCAAGTTACTCCATCCCAATTTAGTGCTCCTGTGTGACCTTCGCCCTGTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR GCA 90 bp | GGGTATTATTGTTCCAGACTCAGTGAAGAATTTGCCAGAGAACAGAAACTCCCACAATTCCCTGTCCACTaGCCCCAGCCTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GYYCSRLSEEFAREQKLPQFPVH*PQPEAL Trigger: AAGGGCTTCAGGCTGGGGGCAGTGGACAGGGAATTG...TGGGAGTTTCTGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAATAATACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR TCA 90 bp | AGAGATCCTAGCTTGTGGCCCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCTTGTTCCAGACTCAGTaGAGAATTTGCCAGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: RDPSLWPCQNQNPGIPIPLFQTQ*RICQRT Trigger: TGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAA...GGGAATTGGGATACCTGGATTCTGGTTCTGACAGGGCCACAAGCTAGGATCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CCA 90 bp | CCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCTGTCCACTGCCCCCAGCCTAGCACTAAATTGGGATaGAGTAACTTGCTAAGTATA | + |
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Preference number: 4 (lower is better) Translates to: PVRTRIQVSQFPVHCPQPSTKLG*SNLLSI Trigger: TATACTTAGCAAGTTACTCCATCCCAATTTAGTGCT...AGGCTGGGGGCAGTGGACAGGGAATTGGGATACCTGGATTCTGGTTCTGACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTAAGAGGAAATGACGAGCCAAAGCCTTCTGCGTTTGTTAGAGATCCTCGTAAGTGCTTAGGATaGGTGATGGACGGGAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SFLRGNDEPKPSAFVRDPRKCLG*VMDGKD Trigger: GTCTTTCCCGTCCATCACCCATCCTAAGCACTTACG...AGGATCTCTAACAAACGCAGAAGGCTTTGGCTCGTCATTTCCTCTTAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CCA 90 bp | AGAGATCCTAGCTTGTGGCCCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCACATGCAAATACATGTaGTTTCTGGTGACAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RDPSLWPCQNQNPGIPIPTCKYM*FLVTSS Trigger: AGAACTTGTCACCAGAAACCACATGTATTTGCATGT...GGGAATTGGGATACCTGGATTCTGGTTCTGACAGGGCCACAAGCTAGGATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR TCA 90 bp | GGGTATTATTGTTCCAGACTCAGTGAAGAATTTGCCAGAGAACAGAAACTCCCAAGACAGTGTGGGAAATaGCCTAAATATGCACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GYYCSRLSEEFAREQKLPRQCGK*PKYARA Trigger: TGCCCGTGCATATTTAGGTCATTTCCCACACTGTCT...TGGGAGTTTCTGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAATAATACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR TCA 90 bp | AAATGTGTGCATTGCTCAGCTGTATCTTGTAATCAGCATGCCAGCATTTCCTACACAGAAACTCCCAGCTaGAAATGTGTGCATTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KCVHCSAVSCNQHASISYTETPS*KCVHCS Trigger: TGAGCAATGCACACATTTTCAGCTGGGAGTTTCTGT...GTAGGAAATGCTGGCATGCTGATTACAAGATACAGCTGAGCAATGCACACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| 3UTR CAA 72 bp | AAGGACACAGGGCGAAGGTCACACAGGAGCACTAAATaGGGATGGAGTAACTTGCTAAGTATAAAGTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: KDTGRRSHRSTK*GWSNLLSIKLR Trigger: TCTTAACTTTATACTTAGCAAGTTACTCCATCCCAATTTAGTGCTCCTGTGTGACCTTCGCCCTGTGTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR TCA 90 bp | ATAAAGTTAAGACCTACATTAAGACCACCTCTATGCACACGTTCAGTTAGAGGGACAGAAACTCCCAGCTaGAAATGTGTGCATTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: IKLRPTLRPPLCTRSVRGTETPS*KCVHCS Trigger: TGAGCAATGCACACATTTTCAGCTGGGAGTTTCTGT...CCCTCTAACTGAACGTGTGCATAGAGGTGGTCTTAATGTAGGTCTTAACTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR GCA 90 bp | TCCTTTTTAAGAGGAAATGACGAGCCAAAGCCTTCTGCGTTTGTTAGAGATCCTATTTACTCACGTAAGTaGTTAGGATGGGTGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: SFLRGNDEPKPSAFVRDPIYSRK*LGWVMD Trigger: GTCCATCACCCATCCTAAGCACTTACGTGAGTAAAT...AGGATCTCTAACAAACGCAGAAGGCTTTGGCTCGTCATTTCCTCTTAAAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CCA 90 bp | AGCTCCTCCTTTTTAAGAGGAAATGACGAGCCAAAGCCTTCTGCGTTTGTTAGAACATGCAAATACATGTaGTTTCTGGTGACAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SSSFLRGNDEPKPSAFVRTCKYM*FLVTSS Trigger: AGAACTTGTCACCAGAAACCACATGTATTTGCATGT...TCTAACAAACGCAGAAGGCTTTGGCTCGTCATTTCCTCTTAAAAAGGAGGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR GCA 90 bp | GGTATGTTTACAAAAGTCCAGAATGGGTCAGTATTTGGGGGAAATAGAGATTTGGCTCAGCATCTGAGCTaGATTATTTACTCACGTAAG | + |
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Preference number: 4 (lower is better) Translates to: GMFTKVQNGSVFGGNRDLAQHLS*IIYSRK Trigger: CTTACGTGAGTAAATAATGCAGCTCAGATGCTGAGC...CAAATCTCTATTTCCCCCAAATACTGACCCATTCTGGACTTTTGTAAACATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CCA 90 bp | ATAAAGTTAAGACCTACATTAAGACCACCTCTATGCACACGTTCAGTTAGAGGGAGCACTAAATTGGGATaGAGTAACTTGCTAAGTATA | + |
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Preference number: 4 (lower is better) Translates to: IKLRPTLRPPLCTRSVRGSTKLG*SNLLSI Trigger: TATACTTAGCAAGTTACTCCATCCCAATTTAGTGCT...CCCTCTAACTGAACGTGTGCATAGAGGTGGTCTTAATGTAGGTCTTAACTTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CAA 90 bp | CCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCTGTCCACTGCCCCCAGCCTCACAGGAGCACTAAATaGGGATGGAGTAACTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: PVRTRIQVSQFPVHCPQPHRSTK*GWSNLL Trigger: TAGCAAGTTACTCCATCCCAATTTAGTGCTCCTGTG...AGGCTGGGGGCAGTGGACAGGGAATTGGGATACCTGGATTCTGGTTCTGACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CAA 90 bp | CCTAGCTTGTGGCCCTGTCAGAACCAGAATCCAGGTATCCCAATTCCCTGTCCACACAGGAGCACTAAATaGGGATGGAGTAACTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: PSLWPCQNQNPGIPIPCPHRSTK*GWSNLL Trigger: TAGCAAGTTACTCCATCCCAATTTAGTGCTCCTGTG...TGGACAGGGAATTGGGATACCTGGATTCTGGTTCTGACAGGGCCACAAGCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CAA 90 bp | GGGTATTATTGTTCCAGACTCAGTGAAGAATTTGCCAGAGAACAGAAACTCCCATGTCCTCTAGGGAGGTaGAAGGAGGGTCTCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GYYCSRLSEEFAREQKLPCPLGR*KEGLRQ Trigger: CTGCCTGAGACCCTCCTTCAACCTCCCTAGAGGACA...TGGGAGTTTCTGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAATAATACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS-3UTR CAA 90 bp | ATAGGGTATTATTGTTCCAGACTCAGTGAAGAATTTGCCAGAGAACAGAAACTCTGTCCTCTAGGGAGGTaGAAGGAGGGTCTCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: IGYYCSRLSEEFAREQKLCPLGR*KEGLRQ Trigger: CTGCCTGAGACCCTCCTTCAACCTCCCTAGAGGACA...GAGTTTCTGTTCTCTGGCAAATTCTTCACTGAGTCTGGAACAATAATACCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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| CDS GCA 90 bp | AACTTGCTAAGTATAAAGTTAAGACCTACATTAAGACCACCTCTATaGACACGTTCAGTTAGAGGGCTCAATGGATACACCAGGCGCCTA | + |
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Preference number: 5 (lower is better) Translates to: NLLSIKLRPTLRPPL*TRSVRGLNGYTRRL Trigger: TAGGCGCCTGGTGTATCCATTGAGCCCTCTAACTGAACGTGTGCATAGAGGTGGTCTTAATGTAGGTCTTAACTTTATACTTAGCAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366820.10 ENST00000420304.6 |
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