Pregenerated sensors for LEFTY1 (Homo sapiens)
Ensembl gene IDs: ENSG00000243709Ensembl transcript IDs: ENST00000272134.5, ENST00000492457.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTGCTTAGAATATAGTGCAGTGAATAATAAGAATAGAGAAAACTaGGCAAGGGCTCTCCAGTGGCCAAAGATTCTCATTCCTGAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: KCLEYSAVNNKNREN*ARALQWPKILIPEK Trigger: CTTCTCAGGAATGAGAATCTTTGGCCACTGGAGAGCCCTTGCTCAGTTTTCTCTATTCTTATTATTCACTGCACTATATTCTAAGCACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| 3UTR-3UTR CCA 90 bp | GGATTGGGGATGCACAACCCACACTTAACCCCAGGTCTTAGGTCCAGAGTGGTGGCAAGGGCTCTCCAGTaGCCAAAGATTCTCATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GLGMHNPHLTPGLRSRVVARALQ*PKILIP Trigger: AGGAATGAGAATCTTTGGCCACTGGAGAGCCCTTGC...CACCACTCTGGACCTAAGACCTGGGGTTAAGTGTGGGTTGTGCATCCCCAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| 3UTR CAA 90 bp | GACTTTAGCCCAGATCCAGTGACAGGACAAGTAAACAATGACACATaGGGCTTTCTGCCCTCAGGTTACAGTATCTCCACATGTAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: DFSPDPVTGQVNNDT*GFLPSGYSISTCKC Trigger: GCACTTACATGTGGAGATACTGTAACCTGAGGGCAGAAAGCCCAATGTGTCATTGTTTACTTGTCCTGTCACTGGATCTGGGCTAAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR GCA 90 bp | TTATCTGGATTGGGGATGCACAACCCACACTTAACCCCAGGTCTTAGGTCCAGAGGGGCTGCATGGTGCTaGCCTGGAGGAGCAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGLGMHNPHLTPGLRSRGAAWC*PGGARG Trigger: GCCTCTTGCTCCTCCAGGGCAGCACCATGCAGCCCC...TCTGGACCTAAGACCTGGGGTTAAGTGTGGGTTGTGCATCCCCAATCCAGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR GCA 90 bp | AGAGCACAGAGCATTTGTCCATCAGCAGTTCAGTCATCGCCAGCTCTCCTGGTAACAGGGGCTGCATGGTaGTGCCCTGGAGGAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAQSICPSAVQSSPALLVTGAAW*CPGGAR Trigger: TCTTGCTCCTCCAGGGCAGCACCATGCAGCCCCTGT...TACCAGGAGAGCTGGCGATGACTGAACTGCTGATGGACAAATGCTCTGTGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR CCA 90 bp | GGATTGGGGATGCACAACCCACACTTAACCCCAGGTCTTAGGTCCAGAGTGGTGTTAGGTCCAGAGTGGTaGTGGAGGACTTTAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGMHNPHLTPGLRSRVVLGPEW*WRTLAQ Trigger: CTGGGCTAAAGTCCTCCACCACCACTCTGGACCTAA...CACCACTCTGGACCTAAGACCTGGGGTTAAGTGTGGGTTGTGCATCCCCAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR GCA 90 bp | AGAATAGAGAAAACTGAGCAAGGGCTCTCCAGTGGCCAAAGATTCTCATTCCTGGGGGCTGCCGGCAGGTaGCCACACACTCATAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RIEKTEQGLSSGQRFSFLGAAGR*PHTHKP Trigger: TGGCTTATGAGTGTGTGGGCACCTGCCGGCAGCCCC...CAGGAATGAGAATCTTTGGCCACTGGAGAGCCCTTGCTCAGTTTTCTCTATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR CCA 90 bp | TTATCTGGATTGGGGATGCACAACCCACACTTAACCCCAGGTCTTAGGTCCAGACATCGCCAGCTCTCCTaGTACCCTCGAACACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGLGMHNPHLTPGLRSRHRQLS*YPRTLQ Trigger: CTGAAGTGTTCGAGGGTACCAGGAGAGCTGGCGATG...TCTGGACCTAAGACCTGGGGTTAAGTGTGGGTTGTGCATCCCCAATCCAGATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTCCAGAGTGGTGGTGGAGGACTTTAGCCCAGATCCAGTGACAGGACAAGCAAGGGCTCTCCAGTaGCCAAAGATTCTCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSRVVVEDFSPDPVTGQARALQ*PKILIP Trigger: AGGAATGAGAATCTTTGGCCACTGGAGAGCCCTTGC...TTGTCCTGTCACTGGATCTGGGCTAAAGTCCTCCACCACCACTCTGGACCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR TCA 90 bp | TTATCTGGATTGGGGATGCACAACCCACACTTAACCCCAGGTCTTAGGTCCAGAAAGAATAGAGAAAACTaGGCAAGGGCTCTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGLGMHNPHLTPGLRSRKNREN*ARALQW Trigger: CCACTGGAGAGCCCTTGCTCAGTTTTCTCTATTCTT...TCTGGACCTAAGACCTGGGGTTAAGTGTGGGTTGTGCATCCCCAATCCAGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR CCA 90 bp | AACAATGACACATTGGGCTTTCTGCCCTCAGGTTACAGTATCTCCACATGTAAGGGTCCAGAGTGGTGGTaGAGGACTTTAGCCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NNDTLGFLPSGYSISTCKGPEWW*RTLAQI Trigger: GATCTGGGCTAAAGTCCTCCACCACCACTCTGGACC...CTTACATGTGGAGATACTGTAACCTGAGGGCAGAAAGCCCAATGTGTCATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR CCA 90 bp | TTTTACAAAGTCTTTATTATCTGGATTGGGGATGCACAACCCACACTTAACCCCGAGCAAGAGGCAGAGTaGGGCTGTCCCTTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FYKVFIIWIGDAQPTLNPEQEAE*GCPLRR Trigger: CCTTCTCAAGGGACAGCCCCACTCTGCCTCTTGCTC...GGGGTTAAGTGTGGGTTGTGCATCCCCAATCCAGATAATAAAGACTTTGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTCCAGAGTGGTGGTGGAGGACTTTAGCCCAGATCCAGTGACAGGACAAAAAGTCTTTATTATCTaGATTGGGGATGCACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSRVVVEDFSPDPVTGQKVFII*IGDAQP Trigger: GGGTTGTGCATCCCCAATCCAGATAATAAAGACTTT...TTGTCCTGTCACTGGATCTGGGCTAAAGTCCTCCACCACCACTCTGGACCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCTGCCCTCAGGTTACAGTATCTCCACATGTAAGTGCTTAGAATATAGTGTCTTAGGTCCAGAGTaGTGGTGGAGGACTTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFLPSGYSISTCKCLEYSVLGPE*WWRTLA Trigger: GGCTAAAGTCCTCCACCACCACTCTGGACCTAAGAC...ACTATATTCTAAGCACTTACATGTGGAGATACTGTAACCTGAGGGCAGAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR GCA 90 bp | ATAGAGAAAACTGAGCAAGGGCTCTCCAGTGGCCAAAGATTCTCATTCCTGAGAACACATTGGGCTTTCTaGCCTCAGGTTACAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: IEKTEQGLSSGQRFSFLRTHWAF*PQVTVS Trigger: AGATACTGTAACCTGAGGGCAGAAAGCCCAATGTGT...TCTCAGGAATGAGAATCTTTGGCCACTGGAGAGCCCTTGCTCAGTTTTCTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR TCA 90 bp | ACAGGACAAGTAAACAATGACACATTGGGCTTTCTGCCCTCAGGTTACAGTATCAGGACAAGTAAACAATaGCACATTGGGCTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGQVNNDTLGFLPSGYSIRTSKQ*HIGLSA Trigger: GGCAGAAAGCCCAATGTGTCATTGTTTACTTGTCCT...GATACTGTAACCTGAGGGCAGAAAGCCCAATGTGTCATTGTTTACTTGTCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS-3UTR CCA 90 bp | TACAAAGTCTTTATTATCTGGATTGGGGATGCACAACCCACACTTAACCCCAGGCTTTATTATCTGGATTaGGGATGCACAACCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: YKVFIIWIGDAQPTLNPRLYYLD*GCTTHT Trigger: AGTGTGGGTTGTGCATCCCCAATCCAGATAATAAAG...CCTGGGGTTAAGTGTGGGTTGTGCATCCCCAATCCAGATAATAAAGACTTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS TCA 90 bp | CAGATGGCCCACGTCAGGCTGGACACGCGGGCCCCTGGTGAGGCCTaGGTCCCTGGCCGGGGAGCTCCGCTAAGCTGCCCGACCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QMAHVRLDTRAPGEA*VPGRGAPLSCPTSH Trigger: ATGGGAGGTCGGGCAGCTTAGCGGAGCTCCCCGGCCAGGGACTCAGGCCTCACCAGGGGCCCGCGTGTCCAGCCTGACGTGGGCCATCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||
| CDS TCA 90 bp | TTCGATTCAGATGGCCCACGTCAGGCTGGACACGCGGGCCCCTGGTaGGGCCTGAGTCCCTGGCCGGGGAGCTCCGCTAAGCTGCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: FDSDGPRQAGHAGPW*GLSPWPGSSAKLPD Trigger: GTCGGGCAGCTTAGCGGAGCTCCCCGGCCAGGGACTCAGGCCTCACCAGGGGCCCGCGTGTCCAGCCTGACGTGGGCCATCTGAATCGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||
| CDS CCA 90 bp | CTCCCATGTGCAGAGGGCGCTGCTGGGGCCACAGGCGAGGCTGCGTaGGGAAGCGGAGCGTGGATTCCAGCGCTTTCCCCTAGATCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LPCAEGAAGATGEAA*GSGAWIPALSPRSN Trigger: GTTGGATCTAGGGGAAAGCGCTGGAATCCACGCTCCGCTTCCCCACGCAGCCTCGCCTGTGGCCCCAGCAGCGCCCTCTGCACATGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||
| CDS CCA 90 bp | TTGAGCAAGATGGGTGTATTTCGATTCAGATGGCCCACGTCAGGCTaGACACGCGGGCCCCTGGTGAGGCCTGAGTCCCTGGCCGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSKMGVFRFRWPTSG*TRGPLVRPESLAGE Trigger: CTCCCCGGCCAGGGACTCAGGCCTCACCAGGGGCCCGCGTGTCCAGCCTGACGTGGGCCATCTGAATCGAAATACACCCATCTTGCTCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||
| CDS CCA 90 bp | TCTCTAGGCCTCGTCTTGAGCAAGATGGGTGTATTTCGATTCAGATaGCCCACGTCAGGCTGGACACGCGGGCCCCTGGTGAGGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLGLVLSKMGVFRFR*PTSGWTRGPLVRPE Trigger: CTCAGGCCTCACCAGGGGCCCGCGTGTCCAGCCTGACGTGGGCCATCTGAATCGAAATACACCCATCTTGCTCAAGACGAGGCCTAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTATTATCTGGATTGGGGATGCACAACCCACACTTAACCCCAGGTCTTGAGAGCACAGAGCATTaGTCCATCAGCAGTTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSLLSGLGMHNPHLTPGLESTEH*SISSSV Trigger: GACTGAACTGCTGATGGACAAATGCTCTGTGCTCTC...AAGACCTGGGGTTAAGTGTGGGTTGTGCATCCCCAATCCAGATAATAAAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272134.5 |
||
| CDS TCA 72 bp | CACGTCAGGCTGGACACGCGGGCCCCTGGTGAGGCCTaGGTCCCTGGCCGGGGAGCTCCGCTAAGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: HVRLDTRAPGEA*VPGRGAPLSCP Trigger: CGGGCAGCTTAGCGGAGCTCCCCGGCCAGGGACTCAGGCCTCACCAGGGGCCCGCGTGTCCAGCCTGACGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||
| CDS CCA 72 bp | GCAGAGGGCGCTGCTGGGGCCACAGGCGAGGCTGCGTaGGGAAGCGGAGCGTGGATTCCAGCGCTTTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AEGAAGATGEAA*GSGAWIPALSP Trigger: AGGGGAAAGCGCTGGAATCCACGCTCCGCTTCCCCACGCAGCCTCGCCTGTGGCCCCAGCAGCGCCCTCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||
| CDS CCA 72 bp | ATGGGTGTATTTCGATTCAGATGGCCCACGTCAGGCTaGACACGCGGGCCCCTGGTGAGGCCTGAGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MGVFRFRWPTSG*TRGPLVRPESL Trigger: CAGGGACTCAGGCCTCACCAGGGGCCCGCGTGTCCAGCCTGACGTGGGCCATCTGAATCGAAATACACCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||
| CDS CCA 72 bp | CTCGTCTTGAGCAAGATGGGTGTATTTCGATTCAGATaGCCCACGTCAGGCTGGACACGCGGGCCCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVLSKMGVFRFR*PTSGWTRGPLV Trigger: CACCAGGGGCCCGCGTGTCCAGCCTGACGTGGGCCATCTGAATCGAAATACACCCATCTTGCTCAAGACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||
| CDS CAA 90 bp | CCAAGGTCACCTGTCGTTAAAGTGACTGACTCTCTAGGCCTCGTCTaGAGCAAGATGGGTGTATTTCGATTCAGATGGCCCACGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRSPVVKVTDSLGLV*SKMGVFRFRWPTSG Trigger: GCCTGACGTGGGCCATCTGAATCGAAATACACCCATCTTGCTCAAGACGAGGCCTAGAGAGTCAGTCACTTTAACGACAGGTGACCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492457.1 |
||