RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LEF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000138795

Ensembl transcript IDs: ENST00000265165.6, ENST00000379951.6, ENST00000438313.6, ENST00000503879.5, ENST00000504426.5, ENST00000504775.5, ENST00000504950.5, ENST00000505293.1, ENST00000505297.5, ENST00000505328.1, ENST00000505379.5, ENST00000506680.5, ENST00000507470.5, ENST00000509428.5, ENST00000510135.5, ENST00000510624.5, ENST00000510717.5, ENST00000512172.1, ENST00000512407.5, ENST00000514444.5, ENST00000515500.5

Found 548 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGGGGTGCTGATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATaGCAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTAC +
Preference number: 1 (lower is better)
Translates to: TGVLMDVLVAGSSCA*QANAAKLPSLPKGY
Trigger: GTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATCAGCACCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR GCA 90 bp CTCTTCCATGAACTCCTCCACTGGGGTGCTGATGGATGTGCTGGTTaGTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACC +
Preference number: 1 (lower is better)
Translates to: LFHELLHWGADGCAG*WLQLRMTGKCSQVT
Trigger: GGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATCAGCACCCCAGTGGAGGAGTTCATGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR CCA 90 bp TTCCATGAACTCCTCCACTGGGGTGCTGATGGATGTGCTGGTTGCTaGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTC +
Preference number: 1 (lower is better)
Translates to: FHELLHWGADGCAGC*LQLRMTGKCSQVTV
Trigger: GACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATCAGCACCCCAGTGGAGGAGTTCATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR GCA 90 bp GCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTaGCGAAAGGTTACAGGTTTGGATGCAAGATGCTCTGGGAAGTGC +
Preference number: 1 (lower is better)
Translates to: APVAHDRQMQPSYRP*RKVTGLDARCSGKC
Trigger: GCACTTCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR GCA 90 bp GATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATaGAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATG +
Preference number: 1 (lower is better)
Translates to: DGCAGCWLQLRMTGK*SQVTVLAERLQVWM
Trigger: CATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR CCA 90 bp GTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTaGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACA +
Preference number: 1 (lower is better)
Translates to: VSSSDLRVKLMSVFL*GRLGRPWRQSGFST
Trigger: TGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
3UTR CCA 90 bp TTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATGCAAGATGCTCTaGGAAGTGCACGCAGATATGAGGGGAGAAAAGCTGCTCAGCTGC +
Preference number: 1 (lower is better)
Translates to: LPSLPKGYRFGCKML*EVHADMRGEKLLSC
Trigger: GCAGCTGAGCAGCTTTTCTCCCCTCATATCTGCGTGCACTTCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTCGGCAAGGACGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR CCA 90 bp GGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTaGATGCAAGATGCTCTGGGAAGTGCACGCAGATATGAGGGGAGA +
Preference number: 1 (lower is better)
Translates to: GKCSQVTVLAERLQV*MQDALGSARRYEGR
Trigger: TCTCCCCTCATATCTGCGTGCACTTCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR GCA 90 bp AATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATaGAAGATGCTCTGGGAAGTGCACGCAGATATGAGGGGAGAAAAG +
Preference number: 1 (lower is better)
Translates to: NAAKLPSLPKGYRFG*KMLWEVHADMRGEK
Trigger: CTTTTCTCCCCTCATATCTGCGTGCACTTCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR TCA 90 bp ATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTaGTTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTA +
Preference number: 1 (lower is better)
Translates to: ILELGSCSRRKRGWQ*LSLWISVSSSDLRV
Trigger: TACCCTGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
3UTR CAA 90 bp CTCCTCCACTGGGGTGCTGATGGATGTGCTGGTTGCTGGCTCCAGTaGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAA +
Preference number: 2 (lower is better)
Translates to: LLHWGADGCAGCWLQ*RMTGKCSQVTVLAE
Trigger: TTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATCAGCACCCCAGTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR CCA 90 bp GTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACACTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATG +
Preference number: 2 (lower is better)
Translates to: VFLWGRLGRPWRQSGFSTLGSLP*LCTLGM
Trigger: CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG...TGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
3UTR-3UTR CCA 90 bp TGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTaGGGTCGCTGCCTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: WGRLGRPWRQSGFSTSFHLQKRS*GRCLGF
Trigger: AAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAG...ATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
3UTR-3UTR CCA 90 bp GGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATG +
Preference number: 2 (lower is better)
Translates to: GQAVETVWVFNKLPSPEELGSLP*LCTLGM
Trigger: CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG...CTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
3UTR-3UTR CCA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCATCCTTTGGGGTCGACTaGGCAGGCCGTGGAGACAGT +
Preference number: 2 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSSFGVD*AGRGDS
Trigger: ACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGA...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
3UTR-3UTR CCA 90 bp GGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGTGGAGACAGTCTaGGTTTTCAACAAGCTTCCA +
Preference number: 2 (lower is better)
Translates to: GCWLQLRMTGKCSQVTVLAVETV*VFNKLP
Trigger: TGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGC...AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
3UTR-3UTR GCA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATAGGTCCTGGGGTCGCTaGCTTGGCTTTGCACGTTGG +
Preference number: 2 (lower is better)
Translates to: ALFWNLALAVDERGVGSDRSWGR*LGFARW
Trigger: CCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCT...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
3UTR-3UTR GCA 90 bp TGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGGTTACAGGTTTGGATaGAAGATGCTCTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: CAGCWLQLRMTGKCSQVTGYRFG*KMLWEV
Trigger: CACTTCCCAGAGCATCTTGCATCCAAACCTGTAACC...GGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR CAA 90 bp TTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATaGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGA +
Preference number: 2 (lower is better)
Translates to: LSLWISVSSSDLRVK*MSVFLWGRLGRPWR
Trigger: TCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
3UTR-3UTR TCA 90 bp TCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTTTTGCACGTTGGGAATaGGCTTCGTTTTCCACCATG +
Preference number: 2 (lower is better)
Translates to: SGFSTSFHLQKRSWGRCLFARWE*ASFSTM
Trigger: CATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAA...AAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
3UTR-3UTR TCA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTAAGAGGGGTTGGCAGTaGTTGTCTTTATGGATCAGC +
Preference number: 2 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGKRGWQ*LSLWIS
Trigger: GCTGATCCATAAAGACAATCACTGCCAACCCCTCTT...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR CCA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATCTCCAGAAGAGGTCCTaGGGTCGCTGCCTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: ALFWNLALAVDERGVGSDLQKRS*GRCLGF
Trigger: AAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAG...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
3UTR-3UTR CCA 90 bp GATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGAAAGGTTACAGGTTTaGATGCAAGATGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: DGCAGCWLQLRMTGKCSQERLQV*MQDALG
Trigger: TCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTC...TTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR TCA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCCCTCCACTGGGGTGCTaGTGGATGTGCTGGTTGCTG +
Preference number: 2 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGPPLGC*WMCWLL
Trigger: CAGCAACCAGCACATCCATCAGCACCCCAGTGGAGG...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR GCA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTC +
Preference number: 2 (lower is better)
Translates to: ALFWNLALAVDERGVGSDSLPWL*TLGMSF
Trigger: GAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGA...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
3UTR-3UTR CCA 90 bp GGCTGCCAATTGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTATGTCAGTGTTCCTTTaGGGTCGACTGGGCAGGCCG +
Preference number: 2 (lower is better)
Translates to: GCQLLPTEWVWLLHLFSSMSVFL*GRLGRP
Trigger: CGGCCTGCCCAGTCGACCCCAAAGGAACACTGACAT...AGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAATTGGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR CCA 90 bp ACTATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGGATGTGCTGGTTGCTaGCTCCAGTTGCGCATGACA +
Preference number: 2 (lower is better)
Translates to: TMCYRQFTEKPLTRQAVSGCAGC*LQLRMT
Trigger: TGTCATGCGCAACTGGAGCCAGCAACCAGCACATCC...TGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACATAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR TCA 90 bp GTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCATTTGCACGTTGGGAATaGGCTTCGTTTTCCACCATG +
Preference number: 2 (lower is better)
Translates to: VDERGVGSDCLYGSASLAFARWE*ASFSTM
Trigger: CATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAA...TGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
3UTR-3UTR GCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAATCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTC +
Preference number: 2 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSESLPWL*TLGMSF
Trigger: GAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGA...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265165.6
3UTR-3UTR TCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAATTTGCACGTTGGGAATaGGCTTCGTTTTCCACCATG +
Preference number: 2 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSEFARWE*ASFSTM
Trigger: CATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAA...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
3UTR-3UTR TCA 90 bp GGCTGCCAATTGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTAAGTGCACGCAGATATaGGGGGAGAAAAGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: GCQLLPTEWVWLLHLFSSKCTQI*GEKSCS
Trigger: TGAGCAGCTTTTCTCCCCTCATATCTGCGTGCACTT...AGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAATTGGCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR CCA 90 bp ATGCTCAGCACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGATGCAAGATGCTCTaGGAAGTGCACGCAGATATG +
Preference number: 2 (lower is better)
Translates to: MLSTLTQTGMTNVRMTVLGCKML*EVHADM
Trigger: CATATCTGCGTGCACTTCCCAGAGCATCTTGCATCC...CAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGTGCTGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR CCA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCTTGCTACCAACAGAGTaGGTTTGGCTATTACATTTA +
Preference number: 2 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGLLPTE*VWLLHL
Trigger: TAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAA...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR CAA 90 bp CTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAGATGTCAGTGTTCCTTaGGGGTCGACTGGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: LAPVAHDRQMQPSYRPCRDVSVP*GSTGQA
Trigger: GGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC...TCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR GCA 72 bp GAACTCCTCCACTGGGGTGCTGATGGATGTGCTGGTTaGTGGCTCCAGTTGCGCATGACAGGCAAATGCAGC +
Preference number: 3 (lower is better)
Translates to: ELLHWGADGCAG*WLQLRMTGKCS
Trigger: GCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATCAGCACCCCAGTGGAGGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR CCA 72 bp CTCCTCCACTGGGGTGCTGATGGATGTGCTGGTTGCTaGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAA +
Preference number: 3 (lower is better)
Translates to: LLHWGADGCAGC*LQLRMTGKCSQ
Trigger: TTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATCAGCACCCCAGTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR TCA 72 bp CTGATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATaGCAGGCAAATGCAGCCAAGTTACCGTCCTTGCCG +
Preference number: 3 (lower is better)
Translates to: LMDVLVAGSSCA*QANAAKLPSLP
Trigger: CGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR CCA 72 bp CCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTaGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTC +
Preference number: 3 (lower is better)
Translates to: PLGSTGQAVETV*VFNKLPSPEEV
Trigger: GACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
3UTR-3UTR CAA 90 bp GGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTT +
Preference number: 3 (lower is better)
Translates to: GQAVETVWVFNKLPSPEEVAALA*HVGNEL
Trigger: AAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGAC...CTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
3UTR GCA 72 bp GCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATaGAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAG +
Preference number: 3 (lower is better)
Translates to: AGCWLQLRMTGK*SQVTVLAERLQ
Trigger: CTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR CCA 72 bp CTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCAC +
Preference number: 3 (lower is better)
Translates to: LPSPEEVLGSLP*LCTLGMSFVFH
Trigger: GTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
3UTR CCA 72 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTaGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGG +
Preference number: 3 (lower is better)
Translates to: SDLRVKLMSVFL*GRLGRPWRQSG
Trigger: CCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
3UTR-3UTR CAA 90 bp GCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTT +
Preference number: 3 (lower is better)
Translates to: AGRGDSLGFQQASISRRGVAALA*HVGNEL
Trigger: AAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGAC...ACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
3UTR GCA 72 bp TCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTCGTTTTCCACCATGTT +
Preference number: 3 (lower is better)
Translates to: SPEEVLGSLPWL*TLGMSFVFHHV
Trigger: AACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
3UTR CCA 72 bp ATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTaGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTC +
Preference number: 3 (lower is better)
Translates to: MSVFLWGRLGRP*RQSGFSTSFHL
Trigger: GAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
3UTR-3UTR CAA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATGATGTCAGTGTTCCTTaGGGGTCGACTGGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: ALFWNLALAVDERGVGSDDVSVP*GSTGQA
Trigger: GGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
3UTR-3UTR CAA 90 bp GGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGACCTCAGGGTAAAATaGATGTCAGTGTTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: GCWLQLRMTGKCSQVTVLDLRVK*MSVFLW
Trigger: CCAAAGGAACACTGACATCAATTTTACCCTGAGGTC...AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR TCA 72 bp CTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTaGTTGTCTTTATGGATCAGCGTCTCTAGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: LGSCSRRKRGWQ*LSLWISVSSSD
Trigger: GTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
3UTR GCA 72 bp AAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATaGAAGATGCTCTGGGAAGTGCACGCAGATATGAGG +
Preference number: 3 (lower is better)
Translates to: KLPSLPKGYRFG*KMLWEVHADMR
Trigger: CCTCATATCTGCGTGCACTTCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR CCA 72 bp AGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTaGATGCAAGATGCTCTGGGAAGTGCACGCAGATAT +
Preference number: 3 (lower is better)
Translates to: SQVTVLAERLQV*MQDALGSARRY
Trigger: ATATCTGCGTGCACTTCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR CAA 90 bp TGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACCGGTTGCTGGCTCCAGTaGCGCATGACAGGCAAATGC +
Preference number: 3 (lower is better)
Translates to: CYQQSGFGYYIYLALLNTGCWLQ*RMTGKC
Trigger: GCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC...GGTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR-3UTR CAA 90 bp ATGCTCAGCACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGTTGCTGGCTCCAGTaGCGCATGACAGGCAAATGC +
Preference number: 3 (lower is better)
Translates to: MLSTLTQTGMTNVRMTVLGCWLQ*RMTGKC
Trigger: GCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC...CAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGTGCTGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp GGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCAGACTCCGGGGGCGTCTaGGCGGCGCGCGCTAGACGA +
Preference number: 4 (lower is better)
Translates to: GPGVAALALHVGNELRFPDSGGV*AARARR
Trigger: TCGTCTAGCGCGCGCCGCGCAGACGCCCCCGGAGTC...TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR GCA 90 bp GATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTCCGCAGGTGAGCGGCTaGGCCTCCCCACTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DVSVPLGSTGQAVETVWVPQVSG*ASPLLL
Trigger: GAGAAGCAGTGGGGAGGCGCAGCCGCTCACCTGCGG...AACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGCCTCCAGCGCGGCCCTaGTCCGCGCTTTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PSPEEVLGSLPWLCTLGMPPARP*SALSLA
Trigger: GGCTAGAGAAAGCGCGGAGCAGGGCCGCGCTGGAGG...CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS-3UTR CCA 90 bp GATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGCTCCGGGCGCGTCCTaGTTCCTCGGCCCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: DGCAGCWLQLRMTGKCSQAPGAS*FLGPRA
Trigger: CGCTCTCGGGCCGAGGAACCAGGACGCGCCCGGAGC...TTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp AGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCAAGAGCTGCGCCCCTTaGGTTCGCCCGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLGFQQASISRRGPGVAAKSCAP*VRPAEG
Trigger: CCCCTCGGCCGGGCGAACTCAAGGGGCGCAGCTCTT...GGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR TCA 90 bp CCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGAAGAGCTGCGCCCCTTaGGTTCGCCCGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PQGKIDVSVPLGSTGQAVKSCAP*VRPAEG
Trigger: CCCCTCGGCCGGGCGAACTCAAGGGGCGCAGCTCTT...CACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp GTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACACACGCCTCCCCAAAGTaGAGAGGAGGGTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: VFLWGRLGRPWRQSGFSTHASPK*RGGSGG
Trigger: GCCGCCGGACCCTCCTCTGCACTTTGGGGAGGCGTG...TGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp GGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGAGGCCGAAGGGCACTaGGCGGCGAGGGCTGCGGTA +
Preference number: 4 (lower is better)
Translates to: GCWLQLRMTGKCSQVTVLEAEGH*AARAAV
Trigger: TACCGCAGCCCTCGCCGCCCAGTGCCCTTCGGCCTC...AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp TGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATGGGCCCAAATGCCTCTaGCCGGAGCTCGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: WGRLGRPWRQSGFSTSFHGPKCL*PELEPT
Trigger: TGTCGGCTCGAGCTCCGGGCAGAGGCATTTGGGCCC...ATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR GCA 90 bp TTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAACGCAGTGGAGGGCACTaGGGAGTCTCGGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: FHLQKRSWGRCLGFARWERSGGH*GVSGSH
Trigger: GTGACTCCCCGAGACTCCGCAGTGCCCTCCACTGCG...TTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR GCA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCTGGGCGGCGAGGGCTaGGGTAGCTGGCGACTCCGG +
Preference number: 4 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRLGGEG*GSWRLR
Trigger: CCGGAGTCGCCAGCTACCGCAGCCCTCGCCGCCCAG...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp TCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACCTCCTCCGGAGAGTTaGGGCATCCCGGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: STSFHLQKRSWGRCLGFAPPPES*GIPAAL
Trigger: CAGAGCCGCCGGGATGCCCCAACTCTCCGGAGGAGG...TGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR GCA 90 bp CCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGGGCCCAAATGCCTCTaGCCGGAGCTCGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: PQGKIDVSVPLGSTGQAVGPKCL*PELEPT
Trigger: TGTCGGCTCGAGCTCCGGGCAGAGGCATTTGGGCCC...CACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp ACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATGGACTCCGGGGGCGTCTaGGCGGCGCGCGCTAGACGA +
Preference number: 4 (lower is better)
Translates to: TGKCSQVTVLAERLQVWMDSGGV*AARARR
Trigger: TCGTCTAGCGCGCGCCGCGCAGACGCCCCCGGAGTC...CATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCGAGTTTCTCAGCCTaGCTCGCCGGCTCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GRPWRQSGFSTSFHLQKRSSFSA*LAGSPL
Trigger: GAGCGGCGAGCCGGCGAGCCAGGCTGAGAAACTCGA...CCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp GTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGCCTCCTCCGGAGAGTTaGGGCATCCCGGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VETVWVFNKLPSPEEVLGPPPES*GIPAAL
Trigger: CAGAGCCGCCGGGATGCCCCAACTCTCCGGAGGAGG...CCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CCA 90 bp TGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATAGAGGATGGACCGCATaGGATGGCTGCACCACGGGC +
Preference number: 4 (lower is better)
Translates to: WGRLGRPWRQSGFSTSFHRGWTA*DGCTTG
Trigger: GCCCGTGGTGCAGCCATCCCATGCGGTCCATCCTCT...ATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CCA 90 bp GGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCAGAGGATGGACCGCATaGGATGGCTGCACCACGGGC +
Preference number: 4 (lower is better)
Translates to: GFSTSFHLQKRSWGRCLGRGWTA*DGCTTG
Trigger: GCCCGTGGTGCAGCCATCCCATGCGGTCCATCCTCT...GCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCGGGATGCCAGTTGTGTaGGGACCAGGAGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: GFSTSFHLQKRSWGRCLGGMPVV*GPGGPG
Trigger: TCCCGGTCCTCCTGGTCCCCACACAACTGGCATCCC...GCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp TTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGGCCTCGGGCCCAAATaGCTCTGCCCGGAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: FSTSFHLQKRSWGRCLGFGLGPK*LCPELE
Trigger: CTCGAGCTCCGGGCAGAGGCATTTGGGCCCGAGGCC...AAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR GCA 90 bp TTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAAGGTCCTGGGGTCGCTaGCTTGGCTTTGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: FHLQKRSWGRCLGFARWERSWGR*LGFARW
Trigger: CCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCT...TTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp CTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTGCTCCGGGCGCGTCCTaGTTCCTCGGCCCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: LAVDERGVGSDCLYGSASAPGAS*FLGPRA
Trigger: CGCTCTCGGGCCGAGGAACCAGGACGCGCCCGGAGC...AGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGGAGGGCTGCGGTAGCTaGCGACTCCGGGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: ALAVDERGVGSDCLYGSAEGCGS*RLRGRL
Trigger: CAGACGCCCCCGGAGTCGCCAGCTACCGCAGCCCTC...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGATCTCCGCTCCGCTGTaGGAGCACCCGCGCAACAGC +
Preference number: 4 (lower is better)
Translates to: ETVWVFNKLPSPEEVLGSISAPL*EHPRNS
Trigger: GCTGTTGCGCGGGTGCTCCCACAGCGGAGCGGAGAT...CGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp CTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGGGATGCCAGTTGTGTaGGGACCAGGAGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: LGFQQASISRRGPGVAALGMPVV*GPGGPG
Trigger: TCCCGGTCCTCCTGGTCCCCACACAACTGGCATCCC...CAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGCGACTGGGCAGGCCGTaGAGACAGTCTGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PSPEEVLGSLPWLCTLGMRLGRP*RQSGFS
Trigger: TGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCG...CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTCCTTTGGGGTCGACTaGGCAGGCCGTGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: GFSTSFHLQKRSWGRCLGSFGVD*AGRGDS
Trigger: ACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGA...GCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CCA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGATGTCAGTGTTCCTTTaGGGTCGACTGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PSPEEVLGSLPWLCTLGMMSVFL*GRLGRP
Trigger: CGGCCTGCCCAGTCGACCCCAAAGGAACACTGACAT...CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp GGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGATCGCCCTCGTCCTTaGAGGGGATCATCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: GCWLQLRMTGKCSQVTVLDRPRP*RGSSRP
Trigger: CGGACGAGATGATCCCCTTCAAGGACGAGGGCGATC...AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp CTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATCCTCCACTGGGGTGCTaGTGGATGTGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LGSLPWLCTLGMSFVFHHPPLGC*WMCWLL
Trigger: CAGCAACCAGCACATCCATCAGCACCCCAGTGGAGG...ATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR GCA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGCGCGTCGCCGGGATTTaGGCGCGGAGAACGCCGGTT +
Preference number: 4 (lower is better)
Translates to: ALAVDERGVGSDCLYGSARVAGI*ARRTPV
Trigger: AACCGGCGTTCTCCGCGCGCAAATCCCGGCGACGCG...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp GGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTAGTTGGAAGGGTTCGTaGAGCAGGACAGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: GCWLQLRMTGKCSQVTVLSWKGS*SRTAGG
Trigger: TCCGCCCGCTGTCCTGCTGCACGAACCCTTCCAACT...AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp GATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAAGTTGGAAGGGTTCGTaGAGCAGGACAGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: DGCAGCWLQLRMTGKCSQSWKGS*SRTAGG
Trigger: TCCGCCCGCTGTCCTGCTGCACGAACCCTTCCAACT...TTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp CCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGAGGTCCTGGGGTCGCTaGCTTGGCTTTGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: PQGKIDVSVPLGSTGQAVRSWGR*LGFARW
Trigger: CCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCT...CACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp CTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTaGCTTGGCTTTGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: LGRPWRQSGFSTSFHLQKRSWGR*LGFARW
Trigger: CCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCT...CTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGAGGCCGAAGGGCACTaGGCGGCGAGGGCTGCGGTA +
Preference number: 4 (lower is better)
Translates to: VDERGVGSDCLYGSASLAEAEGH*AARAAV
Trigger: TACCGCAGCCCTCGCCGCCCAGTGCCCTTCGGCCTC...TGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp CGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGGATCATCTCGTCCGTaGCGCAGAGTTCCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RGDSLGFQQASISRRGPGGSSRP*RRVPGP
Trigger: GGGACCCGGAACTCTGCGCCACGGACGAGATGATCC...CCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CCA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGGTTTGTGCTTGTCTaGCCACCTCGTGTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: PSPEEVLGSLPWLCTLGMRFVLV*PPRVRC
Trigger: GCAACGGACACGAGGTGGCCAGACAAGCACAAACCT...CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CCA 90 bp TTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAATGGACCGCATGGGATaGCTGCACCACGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: FHLQKRSWGRCLGFARWEMDRMG*LHHGHF
Trigger: AAAGTGCCCGTGGTGCAGCCATCCCATGCGGTCCAT...TTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGAGAGGATGGACCGCATaGGATGGCTGCACCACGGGC +
Preference number: 4 (lower is better)
Translates to: ETVWVFNKLPSPEEVLGSRGWTA*DGCTTG
Trigger: GCCCGTGGTGCAGCCATCCCATGCGGTCCATCCTCT...CGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGGGATGCCAGTTGTGTaGGGACCAGGAGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: TGQAVETVWVFNKLPSPEGMPVV*GPGGPG
Trigger: TCCCGGTCCTCCTGGTCCCCACACAACTGGCATCCC...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTGGGATGCCAGTTGTGTaGGGACCAGGAGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGGMPVV*GPGGPG
Trigger: TCCCGGTCCTCCTGGTCCCCACACAACTGGCATCCC...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTTCCTTTGGGGTCGACTaGGCAGGCCGTGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: GCWLQLRMTGKCSQVTVLSFGVD*AGRGDS
Trigger: ACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGA...AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp TTATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGCTGGGCGGCGAGGGCTaGGGTAGCTGGCGACTCCGG +
Preference number: 4 (lower is better)
Translates to: LCFILELGSCSRRKRGWQLGGEG*GSWRLR
Trigger: CCGGAGTCGCCAGCTACCGCAGCCCTCGCCGCCCAG...CTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGCATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp GATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTACCGCATGGGATGGCTaGACCACGGGCACTTTATTT +
Preference number: 4 (lower is better)
Translates to: DVSVPLGSTGQAVETVWVTAWDG*TTGTLF
Trigger: AAATAAAGTGCCCGTGGTGCAGCCATCCCATGCGGT...AACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp AGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTCACGGGAGAGGGCATaGCACCTTCTGCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: RRGPGVAALALHVGNELRSRERA*HLLPRI
Trigger: GATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA...ACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGGATCATCTCGTCCGTaGCGCAGAGTTCCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLGSSRP*RRVPGP
Trigger: GGGACCCGGAACTCTGCGCCACGGACGAGATGATCC...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp GGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGCATCGGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GQAVETVWVFNKLPSPEEHRGVL*PCRGRA
Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCCGATG...CTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp ACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTGTAGAGGCCTCCATCTaGATGCTTTCCGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: TSFHLQKRSWGRCLGFARVEASI*MLSVIG
Trigger: CCCGATGACGGAAAGCATCCAGATGGAGGCCTCTAC...ACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp TCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCAATGGACCGCATGGGATaGCTGCACCACGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: STSFHLQKRSWGRCLGFAMDRMG*LHHGHF
Trigger: AAAGTGCCCGTGGTGCAGCCATCCCATGCGGTCCAT...TGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGAGAGGATGGACCGCATaGGATGGCTGCACCACGGGC +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLRGWTA*DGCTTG
Trigger: GCCCGTGGTGCAGCCATCCCATGCGGTCCATCCTCT...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp GATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTAGGGATATCAGGAGCTaGAGGATGTCTGGACATGCC +
Preference number: 4 (lower is better)
Translates to: DVSVPLGSTGQAVETVWVRDIRS*RMSGHA
Trigger: GGCATGTCCAGACATCCTCCAGCTCCTGATATCCCT...AACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp CTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGGGGATGCCAGTTGTGTaGGGACCAGGAGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: LFDLRCYNSWMRDASCVGGMPVV*GPGGPG
Trigger: TCCCGGTCCTCCTGGTCCCCACACAACTGGCATCCC...CCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAACAG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp CTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGCGACTGGGCAGGCCGTaGAGACAGTCTGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LGFQQASISRRGPGVAALRLGRP*RQSGFS
Trigger: TGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCG...CAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATGTATGTCAGTGTTCCTTTaGGGTCGACTGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GVAALALHVGNELRFPPCMSVFL*GRLGRP
Trigger: CGGCCTGCCCAGTCGACCCCAAAGGAACACTGACAT...ACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CCA 90 bp GGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTATGTCAGTGTTCCTTTaGGGTCGACTGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GCWLQLRMTGKCSQVTVLMSVFL*GRLGRP
Trigger: CGGCCTGCCCAGTCGACCCCAAAGGAACACTGACAT...AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
3UTR CAA 72 bp TGGGGTGCTGATGGATGTGCTGGTTGCTGGCTCCAGTaGCGCATGACAGGCAAATGCAGCCAAGTTACCGTC +
Preference number: 4 (lower is better)
Translates to: WGADGCAGCWLQ*RMTGKCSQVTV
Trigger: GACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATCAGCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp GATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAACGTTGCTGGCCGGGATaGTTTCAGACTCGTTCACCA +
Preference number: 4 (lower is better)
Translates to: DGCAGCWLQLRMTGKCSQRCWPG*FQTRSP
Trigger: TGGTGAACGAGTCTGAAATCATCCCGGCCAGCAACG...TTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAAGTGCACGCAGATATaGGGGGAGAAAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PSPEEVLGSLPWLCTLGMKCTQI*GEKSCS
Trigger: TGAGCAGCTTTTCTCCCCTCATATCTGCGTGCACTT...CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTGGCTCCAGTTGCGCATaGCAGGCAAATGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGGSSCA*QANAAK
Trigger: CTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCC...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp TGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGAGGGAACTCTTCCATaGACTCCTCCACTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: WAGRGDSLGFQQASISRREGTLP*TPPLGC
Trigger: GCACCCCAGTGGAGGAGTTCATGGAAGAGTTCCCTC...TCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR TCA 90 bp TTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCGTTGTGGAACAAGGGTaGCCAGTGGAGTGTCGGGTA +
Preference number: 4 (lower is better)
Translates to: FNKLPSPEEVLGSLPWLCVVEQG*PVECRV
Trigger: TACCCGACACTCCACTGGTCACCCTTGTTCCACAAC...GCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS-3UTR GCA 90 bp CTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATTCACGGGAGAGGGCATaGCACCTTCTGCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: LGSLPWLCTLGMSFVFHHSRERA*HLLPRI
Trigger: GATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA...ATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp CTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGATCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LAPVAHDRQMQPSYRPCRSLPWL*TLGMSF
Trigger: GAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGA...TCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp GGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCATCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPGVAALALHVGNELRFPSLPWL*TLGMSF
Trigger: GAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGA...TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAAGCTGCGCCTCCCCACTaGTTCTCCTCCTCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSEAAPPH*FSSSRA
Trigger: GGCGCGGGAGGAGGAGAAGCAGTGGGGAGGCGCAGC...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379951.6
CDS-3UTR GCA 90 bp GGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCATTGTCTGGCCACCTCTaGCATTGGGATAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GPGVAALALHVGNELRFPLSGHL*HWDREG
Trigger: GCCTTCTCTATCCCAATGGCAGAGGTGGCCAGACAA...TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS-3UTR CCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAAGAGGGCTGCGGTAGCTaGCGACTCCGGGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSEEGCGS*RLRGRL
Trigger: CAGACGCCCCCGGAGTCGCCAGCTACCGCAGCCCTC...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp CTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGGGGGTAACTCAAGGGTaGGGGAGGAAAGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LGRPWRQSGFSTSFHLQKGVTQG*GRKGEL
Trigger: CAACTCTCCTTTCCTCCCCCACCCTTGAGTTACCCC...CTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp CTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGAGGTTTGTGCTTGTCTaGCCACCTCGTGTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LGFQQASISRRGPGVAALRFVLV*PPRVRC
Trigger: GCAACGGACACGAGGTGGCCAGACAAGCACAAACCT...CAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CCA 90 bp GGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCCATCGGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GDSLGFQQASISRRGPGVHRGVL*PCRGRA
Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCCGATG...GACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTAGAGGCCTCCATCTaGATGCTTTCCGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: GQAVETVWVFNKLPSPEEVEASI*MLSVIG
Trigger: CCCGATGACGGAAAGCATCCAGATGGAGGCCTCTAC...CTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp TTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCGTAGAGGCCTCCATCTaGATGCTTTCCGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: FNKLPSPEEVLGSLPWLCVEASI*MLSVIG
Trigger: CCCGATGACGGAAAGCATCCAGATGGAGGCCTCTAC...GCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTAGAGGATGGACCGCATaGGATGGCTGCACCACGGGC +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVRGWTA*DGCTTG
Trigger: GCCCGTGGTGCAGCCATCCCATGCGGTCCATCCTCT...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp AAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGAGGGATATCAGGAGCTaGAGGATGTCTGGACATGCC +
Preference number: 4 (lower is better)
Translates to: KLPSPEEVLGSLPWLCTLRDIRS*RMSGHA
Trigger: GGCATGTCCAGACATCCTCCAGCTCCTGATATCCCT...CAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: DSLGFQQASISRRGPGVALGSLP*LCTLGM
Trigger: CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG...AGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp CCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGCTCCAGAAGAGGTCCTaGGGTCGCTGCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PWRQSGFSTSFHLQKRSWLQKRS*GRCLGF
Trigger: AAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAG...CCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCCTCCAGAAGAGGTCCTaGGGTCGCTGCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GDSLGFQQASISRRGPGVLQKRS*GRCLGF
Trigger: AAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAG...GACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp CAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCGACTGGGCAGGCCGTaGAGACAGTCTGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: QAVETVWVFNKLPSPEEVRLGRP*RQSGFS
Trigger: TGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCG...GACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp CTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGGATGTGCTGGTTGCTaGCTCCAGTTGCGCATGACA +
Preference number: 4 (lower is better)
Translates to: LGFQQASISRRGPGVAALGCAGC*LQLRMT
Trigger: TGTCATGCGCAACTGGAGCCAGCAACCAGCACATCC...CAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp GATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGGATGTGCTGGTTGCTaGCTCCAGTTGCGCATGACA +
Preference number: 4 (lower is better)
Translates to: DGCAGCWLQLRMTGKCSQGCAGC*LQLRMT
Trigger: TGTCATGCGCAACTGGAGCCAGCAACCAGCACATCC...TTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGCCCCTAGACCAGCTCTaGACTAGGCTTCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: GRPWRQSGFSTSFHLQKRPLDQL*TRLQTA
Trigger: GGCTGTTTGAAGCCTAGTCCAGAGCTGGTCTAGGGG...CCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS-3UTR CCA 90 bp AGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTAACAAGGGTGACCAGTaGAGTGTCGGGTATCAGGGT +
Preference number: 4 (lower is better)
Translates to: RRGPGVAALALHVGNELRNKGDQ*SVGYQG
Trigger: ACCCTGATACCCGACACTCCACTGGTCACCCTTGTT...ACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510624.5
3UTR CAA 72 bp GCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ASISRRGPGVAA*ALHVGNELRFP
Trigger: TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGATCGCCCTCGTCCTTaGAGGGGATCATCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSDRPRP*RGSSRP
Trigger: CGGACGAGATGATCCCCTTCAAGGACGAGGGCGATC...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp CTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGACCTCTTCGGGATGACTaGTCTCGGCGAAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: LAPVAHDRQMQPSYRPCRPLRDD*SRRRSF
Trigger: AAAAGATCTTCGCCGAGATCAGTCATCCCGAAGAGG...TCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp TGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGACCTTCCTCTTCGGGATaGCTGATCTCGGCGAAGATC +
Preference number: 4 (lower is better)
Translates to: WAGRGDSLGFQQASISRRPSSSG*LISAKI
Trigger: GATCTTCGCCGAGATCAGTCATCCCGAAGAGGAAGG...TCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTCGTTGCTGGCCGGGATaGTTTCAGACTCGTTCACCA +
Preference number: 4 (lower is better)
Translates to: SGFSTSFHLQKRSWGRCLRCWPG*FQTRSP
Trigger: TGGTGAACGAGTCTGAAATCATCCCGGCCAGCAACG...AAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp CTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGCACGGGCACTTTATTTaGTGTTCTCGGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGFQQASISRRGPGVAALHGHFI*CSRDGW
Trigger: CCACCCATCCCGAGAACATCAAATAAAGTGCCCGTG...CAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp AGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCCACGGGCACTTTATTTaGTGTTCTCGGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLGFQQASISRRGPGVAAHGHFI*CSRDGW
Trigger: CCACCCATCCCGAGAACATCAAATAAAGTGCCCGTG...GGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp GACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAATGGGATATACAGGCTaGCCTTGCCAGCCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: DWAGRGDSLGFQQASISRMGYTG*PCQPRG
Trigger: ACCTCTTGGCTGGCAAGGTCAGCCTGTATATCCCAT...TCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR TCA 90 bp ACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TSFHLQKRSWGRCLGFARVTIAG*GMPVVW
Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...ACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp ACTATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCACCGCAGGTGAGCGGCTaGGCCTCCCCACTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TMCYRQFTEKPLTRQAVSPQVSG*ASPLLL
Trigger: GAGAAGCAGTGGGGAGGCGCAGCCGCTCACCTGCGG...TGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp CAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCAGAAGGGCCCCGTTTaGCCCAAAAGAAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: QAVETVWVFNKLPSPEEVQKGPV*PKRRCK
Trigger: CTTGCACCTTCTTTTGGGGCAAACGGGGCCCTTCTG...GACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR GCA 90 bp GCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGCTCCTGAGAGGTTTGTaGTTGTCTGGCCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: AVETVWVFNKLPSPEEVLLLRGL*LSGHLV
Trigger: CACGAGGTGGCCAGACAAGCACAAACCTCTCAGGAG...CAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR GCA 90 bp TCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCAACCGCATGGGATGGCTaGACCACGGGCACTTTATTT +
Preference number: 4 (lower is better)
Translates to: STSFHLQKRSWGRCLGFATAWDG*TTGTLF
Trigger: AAATAAAGTGCCCGTGGTGCAGCCATCCCATGCGGT...TGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp GGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGACCGCATGGGATGGCTaGACCACGGGCACTTTATTT +
Preference number: 4 (lower is better)
Translates to: GQAVETVWVFNKLPSPEETAWDG*TTGTLF
Trigger: AAATAAAGTGCCCGTGGTGCAGCCATCCCATGCGGT...CTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp GGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGTCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQAVETVWVFNKLPSPEESLPWL*TLGMSF
Trigger: GAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGA...CTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp GACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGATCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DWAGRGDSLGFQQASISRSLPWL*TLGMSF
Trigger: GAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGA...TCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp TGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGGTTTGGATGCAAGATaGTCTGGGAAGTGCACGCAG +
Preference number: 4 (lower is better)
Translates to: CAGCWLQLRMTGKCSQVTGLDAR*SGKCTQ
Trigger: CTGCGTGCACTTCCCAGAGCATCTTGCATCCAAACC...GGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGCCAAGTTACCGTCCTTaGCGAAAGGTTACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PSPEEVLGSLPWLCTLGMPSYRP*RKVTGL
Trigger: CAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGG...CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR GCA 90 bp GCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTGATGGATGTGCTGGTTaGTGGCTCCAGTTGCGCATG +
Preference number: 4 (lower is better)
Translates to: AGRGDSLGFQQASISRRGDGCAG*WLQLRM
Trigger: CATGCGCAACTGGAGCCAGCAACCAGCACATCCATC...ACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTCGAGTTTCTCAGCCTaGCTCGCCGGCTCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ALFWNLALAVDERGVGSDSSFSA*LAGSPL
Trigger: GAGCGGCGAGCCGGCGAGCCAGGCTGAGAAACTCGA...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp CTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTGGATCATCTCGTCCGTaGCGCAGAGTTCCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LAVDERGVGSDCLYGSASGSSRP*RRVPGP
Trigger: GGGACCCGGAACTCTGCGCCACGGACGAGATGATCC...AGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTGTAGAGGCCTCCATCTaGATGCTTTCCGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: SRERACHLLPRIWLIAALVEASI*MLSVIG
Trigger: CCCGATGACGGAAAGCATCCAGATGGAGGCCTCTAC...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp TGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTATGGACCGCATGGGATaGCTGCACCACGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: WRQSGFSTSFHLQKRSWGMDRMG*LHHGHF
Trigger: AAAGTGCCCGTGGTGCAGCCATCCCATGCGGTCCAT...ACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGATGGACCGCATGGGATaGCTGCACCACGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRMDRMG*LHHGHF
Trigger: AAAGTGCCCGTGGTGCAGCCATCCCATGCGGTCCAT...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGATGGACCGCATGGGATaGCTGCACCACGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLMDRMG*LHHGHF
Trigger: AAAGTGCCCGTGGTGCAGCCATCCCATGCGGTCCAT...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp CTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTAGAGGATGGACCGCATaGGATGGCTGCACCACGGGC +
Preference number: 4 (lower is better)
Translates to: LAVDERGVGSDCLYGSASRGWTA*DGCTTG
Trigger: GCCCGTGGTGCAGCCATCCCATGCGGTCCATCCTCT...AGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp ACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTGGGAAAACCTGGACATaGAAGTGTCGACTGACAGTG +
Preference number: 4 (lower is better)
Translates to: TSFHLQKRSWGRCLGFARGKTWT*KCRLTV
Trigger: CACTGTCAGTCGACACTTCCATGTCCAGGTTTTCCC...ACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp CTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAGCCGTGGAGACAGTCTaGGTTTTCAACAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LAPVAHDRQMQPSYRPCRAVETV*VFNKLP
Trigger: TGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGC...TCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAGCCGTGGAGACAGTCTaGGTTTTCAACAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VFLWGRLGRPWRQSGFSTAVETV*VFNKLP
Trigger: TGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGC...TGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CCA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCCTTTGGGGTCGACTaGGCAGGCCGTGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: ALAVDERGVGSDCLYGSASFGVD*AGRGDS
Trigger: ACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGA...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp AGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTGGATGCAAGATGCTCTaGGAAGTGCACGCAGATATG +
Preference number: 4 (lower is better)
Translates to: RRGPGVAALALHVGNELRGCKML*EVHADM
Trigger: CATATCTGCGTGCACTTCCCAGAGCATCTTGCATCC...ACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp CTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGACCAGGAGGGAGCTGGAGGATGTCTaGACATGCTGTTCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: LRCYNSWMRDASCVGTRRELEDV*TCCSRD
Trigger: ATCCCGAGAACAGCATGTCCAGACATCCTCCAGCTC...CCTCCTGGTCCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp AGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCGGCCACCTCTGCCATTaGGATAGAGAAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SLGFQQASISRRGPGVAAGHLCH*DREGRS
Trigger: AGATCTGCCTTCTCTATCCCAATGGCAGAGGTGGCC...GGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510624.5
3UTR CAA 72 bp ATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTTCGTTTTCCACCATGT +
Preference number: 4 (lower is better)
Translates to: ISRRGPGVAALA*HVGNELRFPPC
Trigger: ACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp GGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATGTAAGATCTTTTCCTTCTaGGGATCGCCCTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GVAALALHVGNELRFPPCKIFSF*GSPSSL
Trigger: CAAGGACGAGGGCGATCCTCAGAAGGAAAAGATCTT...ACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp GGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATGTCCTCTTCGGGATGACTaGTCTCGGCGAAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: GVAALALHVGNELRFPPCPLRDD*SRRRSF
Trigger: AAAAGATCTTCGCCGAGATCAGTCATCCCGAAGAGG...ACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCCTTCCTCTTCGGGATaGCTGATCTCGGCGAAGATC +
Preference number: 4 (lower is better)
Translates to: WRQSGFSTSFHLQKRSWGPSSSG*LISAKI
Trigger: GATCTTCGCCGAGATCAGTCATCCCGAAGAGGAAGG...ACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCAGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: STSFHLQKRSWGRCLGFAVTIAG*GMPVVW
Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...TGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp TGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: CAGCWLQLRMTGKCSQVTVTIAG*GMPVVW
Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...GGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp GGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCAAGAGGCTTCTTAATGTaGGGTCTTTTTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPGVAALALHVGNELRFPRGFLM*GLFGSC
Trigger: GCAGGAGCCAAAAAGACCTCACATTAAGAAGCCTCT...TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp TTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAAAGAGGGGTTGGCAGTaGTTGTCTTTATGGATCAGC +
Preference number: 4 (lower is better)
Translates to: FHLQKRSWGRCLGFARWEKRGWQ*LSLWIS
Trigger: GCTGATCCATAAAGACAATCACTGCCAACCCCTCTT...TTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp CTACTGAACACCTTACAAGGGCGGAGAAGCCACTATGTGTTACAGGCAATTCACCCTCCACTGGGGTGCTaGTGGATGTGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LLNTLQGRRSHYVLQAIHPPLGC*WMCWLL
Trigger: CAGCAACCAGCACATCCATCAGCACCCCAGTGGAGG...GTGAATTGCCTGTAACACATAGTGGCTTCTCCGCCCTTGTAAGGTGTTCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp GGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTGGACCGGGAATCATATaGTGGGAAAACCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GFQQASISRRGPGVAALAGPGII*WENQPR
Trigger: TCTTGGCTGGTTTTCCCATCATATGATTCCCGGTCC...AGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAACGCAGTGGAGGGCACTaGGGAGTCTCGGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSERSGGH*GVSGSH
Trigger: GTGACTCCCCGAGACTCCGCAGTGCCCTCCACTGCG...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp TTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCACGCGTCGCCGGGATTTaGGCGCGGAGAACGCCGGTT +
Preference number: 4 (lower is better)
Translates to: LSLWISVSSSDLRVKLMSRVAGI*ARRTPV
Trigger: AACCGGCGTTCTCCGCGCGCAAATCCCGGCGACGCG...TGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCTCCTGAGAGGTTTGTaGTTGTCTGGCCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRLLRGL*LSGHLV
Trigger: CACGAGGTGGCCAGACAAGCACAAACCTCTCAGGAG...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGCTCCTGAGAGGTTTGTaGTTGTCTGGCCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLLLRGL*LSGHLV
Trigger: CACGAGGTGGCCAGACAAGCACAAACCTCTCAGGAG...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR GCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGTCACGGGAGAGGGCATaGCACCTTCTGCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLSRERA*HLLPRI
Trigger: GATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR GCA 90 bp GCTCCTGCTCCTTTCTCTGTTCATGCTGAGGCTTCACGTGCATTAGGTCACTGTGAGGATGTCTGGACATaGTGTTCTCGGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: APAPFSVHAEASRALGHCEDVWT*CSRDGW
Trigger: CCACCCATCCCGAGAACAGCATGTCCAGACATCCTC...ACAGTGACCTAATGCACGTGAAGCCTCAGCATGAACAGAGAAAGGAGCAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp TTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTGTTCGGAGAACGCCGGTTCTaGAGGGAGCACGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LWISVSSSDLRVKLMSVFGERRF*REHASP
Trigger: TGGGGAGGCGTGCTCCCTCCAGAACCGGCGTTCTCC...GAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp TTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCACCTCCTCCGGAGAGTTaGGGCATCCCGGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLWISVSSSDLRVKLMSPPPES*GIPAAL
Trigger: CAGAGCCGCCGGGATGCCCCAACTCTCCGGAGGAGG...TGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGAGGTTTGTGCTTGTCTaGCCACCTCGTGTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLRFVLV*PPRVRC
Trigger: GCAACGGACACGAGGTGGCCAGACAAGCACAAACCT...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTCATCGGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVHRGVL*PCRGRA
Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCCGATG...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTATGGACCGCATGGGATaGCTGCACCACGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVMDRMG*LHHGHF
Trigger: AAAGTGCCCGTGGTGCAGCCATCCCATGCGGTCCAT...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp GGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCAGGGATATCAGGAGCTaGAGGATGTCTGGACATGCC +
Preference number: 4 (lower is better)
Translates to: GDSLGFQQASISRRGPGVRDIRS*RMSGHA
Trigger: GGCATGTCCAGACATCCTCCAGCTCCTGATATCCCT...GACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTAGGGATATCAGGAGCTaGAGGATGTCTGGACATGCC +
Preference number: 4 (lower is better)
Translates to: AGRGDSLGFQQASISRRGRDIRS*RMSGHA
Trigger: GGCATGTCCAGACATCCTCCAGCTCCTGATATCCCT...ACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGTTGCCAGCCAAGAGGTaGGGTGATCTGTCCAACACC +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLLPAKR*GDLSNT
Trigger: GGTGTTGGACAGATCACCCCACCTCTTGGCTGGCAA...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp TCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCAAGGTCACTGTCAGTGTaGGGATGTTCCTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: STSFHLQKRSWGRCLGFARSLSV*GCSCLT
Trigger: GGTCAAACAGGAACATCCCCACACTGACAGTGACCT...TGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp ACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATGCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: TGKCSQVTVLAERLQVWMLGSLP*LCTLGM
Trigger: CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG...CATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCACTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSLGSLP*LCTLGM
Trigger: CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGCTCCAGAAGAGGTCCTaGGGTCGCTGCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ALAVDERGVGSDCLYGSALQKRS*GRCLGF
Trigger: AAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAG...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp CAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGGCCGTGGAGACAGTCTaGGTTTTCAACAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QGKIDVSVPLGSTGQAVEAVETV*VFNKLP
Trigger: TGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGC...CTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp GCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTAAACCAGCCAAGAGGTaGGGTGATCTGTCCAACACC +
Preference number: 4 (lower is better)
Translates to: AGRGDSLGFQQASISRRGKPAKR*GDLSNT
Trigger: GGTGTTGGACAGATCACCCCACCTCTTGGCTGGTTT...ACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAAAACCAGCCAAGAGGTaGGGTGATCTGTCCAACACC +
Preference number: 4 (lower is better)
Translates to: TGQAVETVWVFNKLPSPEKPAKR*GDLSNT
Trigger: GGTGTTGGACAGATCACCCCACCTCTTGGCTGGTTT...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGAGGTTTGTGCTTGTCTaGCCACCTCTGCCATTGGGA +
Preference number: 4 (lower is better)
Translates to: VETVWVFNKLPSPEEVLGRFVLV*PPLPLG
Trigger: TCCCAATGGCAGAGGTGGCCAGACAAGCACAAACCT...CCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS-3UTR CCA 90 bp CTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGACCAGGAGGAGGGATATCAGGAGCTaGAGGATGTCTGGACATGCT +
Preference number: 4 (lower is better)
Translates to: LRCYNSWMRDASCVGTRRRDIRS*RMSGHA
Trigger: AGCATGTCCAGACATCCTCCAGCTCCTGATATCCCT...CCTCCTGGTCCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
3UTR CAA 72 bp TGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATaGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WISVSSSDLRVK*MSVFLWGRLGR
Trigger: CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp CGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGAAGATCTTTTCCTTCTaGGGATCGCCCTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RGDSLGFQQASISRRGPGKIFSF*GSPSSL
Trigger: CAAGGACGAGGGCGATCCTCAGAAGGAAAAGATCTT...CCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTCACGGGCACTTTATTTaGTGTTCTCGGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSTSFHLQKRSWGRCLGFHGHFI*CSRDGW
Trigger: CCACCCATCCCGAGAACATCAAATAAAGTGCCCGTG...AAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGCACGGGCACTTTATTTaGTGTTCTCGGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLHGHFI*CSRDGW
Trigger: CCACCCATCCCGAGAACATCAAATAAAGTGCCCGTG...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp GGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTGCCTTGTTTGGAGTTaGCATCTGATGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: GFQQASISRRGPGVAALACLVWS*HLMGCV
Trigger: CACACATCCCATCAGATGTCAACTCCAAACAAGGCA...AGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp TTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: FQQASISRRGPGVAALALVTIAG*GMPVVW
Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...CAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp GGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTGTTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GFSTSFHLQKRSWGRCLGCSCLT*GVTIAG
Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAACA...GCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp AGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTTCTCTGTTCATGCTaGGGCTTCACGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: SLGFQQASISRRGPGVAAFLCSC*GFTCIR
Trigger: CCTAATGCACGTGAAGCCTCAGCATGAACAGAGAAA...GGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp CCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGAGAGGCTTCTTAATGTaGGGTCTTTTTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PQGKIDVSVPLGSTGQAVRGFLM*GLFGSC
Trigger: GCAGGAGCCAAAAAGACCTCACATTAAGAAGCCTCT...CACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp CTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGAGAGGCTTCTTAATGTaGGGTCTTTTTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGFQQASISRRGPGVAALRGFLM*GLFGSC
Trigger: GCAGGAGCCAAAAAGACCTCACATTAAGAAGCCTCT...CAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp CTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATTTTGCACGTTGGGAATaGGCTTCGTTTTCCACCATG +
Preference number: 4 (lower is better)
Translates to: LGSLPWLCTLGMSFVFHHFARWE*ASFSTM
Trigger: CATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAA...ATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp CAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGAAGAGGGGTTGGCAGTaGTTGTCTTTATGGATCAGC +
Preference number: 4 (lower is better)
Translates to: QGKIDVSVPLGSTGQAVEKRGWQ*LSLWIS
Trigger: GCTGATCCATAAAGACAATCACTGCCAACCCCTCTT...CTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp CTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGAAGAGGGGTTGGCAGTaGTTGTCTTTATGGATCAGC +
Preference number: 4 (lower is better)
Translates to: LGFQQASISRRGPGVAALKRGWQ*LSLWIS
Trigger: GCTGATCCATAAAGACAATCACTGCCAACCCCTCTT...CAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAAAGTGCACGCAGATATaGGGGGAGAAAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TGQAVETVWVFNKLPSPEKCTQI*GEKSCS
Trigger: TGAGCAGCTTTTCTCCCCTCATATCTGCGTGCACTT...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp CTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGATGCAAACCAGTCTGCTaGACGCATCTGTTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LAPVAHDRQMQPSYRPCRCKPVC*THLLRF
Trigger: AAACCTTAACAGATGCGTTCAGCAGACTGGTTTGCA...TCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGGACCGGGAATCATATaGTGGGAAAACCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TGQAVETVWVFNKLPSPEGPGII*WENQPR
Trigger: TCTTGGCTGGTTTTCCCATCATATGATTCCCGGTCC...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCCACGCCTCCCCAAAGTaGAGAGGAGGGTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGHASPK*RGGSGG
Trigger: GCCGCCGGACCCTCCTCTGCACTTTGGGGAGGCGTG...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp CTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGGTCTTTTTGGCTCCTaGTCCTTTCTCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: LGFQQASISRRGPGVAALGLFGS*SFLCSC
Trigger: GCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACC...CAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCACGGGAGAGGGCATaGCACCTTCTGCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: ALAVDERGVGSDCLYGSASRERA*HLLPRI
Trigger: GATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp AGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTAATAGGGCTGCCAATTaGTACCAACAGAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RRGPGVAALALHVGNELRNRAAN*YQQSGF
Trigger: AAACCCACTCTGTTGGTAGCAATTGGCAGCCCTATT...ACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAAGGATCATCTCGTCCGTaGCGCAGAGTTCCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSEGSSRP*RRVPGP
Trigger: GGGACCCGGAACTCTGCGCCACGGACGAGATGATCC...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp AGTGTGGGGATGTTCCTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATCATCGGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVGMFLFDLRCYNSWMRDHRGVL*PCRGRA
Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCCGATG...ATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAACAGGAACATCCCCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTGTAGAGGCCTCCATCTaGATGCTTTCCGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVVEASI*MLSVIG
Trigger: CCCGATGACGGAAAGCATCCAGATGGAGGCCTCTAC...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp GGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCATTGATGTTCTCGGGATaGGTGGAGAAAGAGATCCAT +
Preference number: 4 (lower is better)
Translates to: GPGVAALALHVGNELRFPLMFSG*VEKEIH
Trigger: ATGGATCTCTTTCTCCACCCATCCCGAGAACATCAA...TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp AAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGTTGATGTTCTCGGGATaGGTGGAGAAAGAGATCCAT +
Preference number: 4 (lower is better)
Translates to: KLPSPEEVLGSLPWLCTLLMFSG*VEKEIH
Trigger: ATGGATCTCTTTCTCCACCCATCCCGAGAACATCAA...CAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp CCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGAGCTGGAGGATGTCTaGACATGCCTTGTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: PWRQSGFSTSFHLQKRSWELEDV*TCLVWS
Trigger: ACTCCAAACAAGGCATGTCCAGACATCCTCCAGCTC...CCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp CAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCAGGTCACTGTCAGTGTaGGGATGTTCCTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: QAVETVWVFNKLPSPEEVRSLSV*GCSCLT
Trigger: GGTCAAACAGGAACATCCCCACACTGACAGTGACCT...GACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTAGGTCACTGTCAGTGTaGGGATGTTCCTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: SRERACHLLPRIWLIAALRSLSV*GCSCLT
Trigger: GGTCAAACAGGAACATCCCCACACTGACAGTGACCT...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp CTACTGAACACCTTACAAGGGCGGAGAAGCCACTATGTGTTACAGGCAATTCACCGACTGGGCAGGCCGTaGAGACAGTCTGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LLNTLQGRRSHYVLQAIHRLGRP*RQSGFS
Trigger: TGAAAACCCAGACTGTCTCCACGGCCTGCCCAGTCG...GTGAATTGCCTGTAACACATAGTGGCTTCTCCGCCCTTGTAAGGTGTTCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp CTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGACCAGGAGGATGCTGTTCTCGGGATaGGTGGAGAAAGAGATCCAT +
Preference number: 4 (lower is better)
Translates to: LRCYNSWMRDASCVGTRRMLFSG*VEKEIH
Trigger: ATGGATCTCTTTCTCCACCCATCCCGAGAACAGCAT...CCTCCTGGTCCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR TCA 90 bp TTATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGGATCGCCCTCGTCCTTaGAGGGGATCATCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: LCFILELGSCSRRKRGWQDRPRP*RGSSRP
Trigger: CGGACGAGATGATCCCCTTCAAGGACGAGGGCGATC...CTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTCACGGGCACTTTATTTaGTGTTCTCGGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVHGHFI*CSRDGW
Trigger: CCACCCATCCCGAGAACATCAAATAAAGTGCCCGTG...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR TCA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAATGCCTTGTTTGGAGTTaGCATCTGATGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: TGQAVETVWVFNKLPSPECLVWS*HLMGCV
Trigger: CACACATCCCATCAGATGTCAACTCCAAACAAGGCA...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp TCTGTTCATGCTGAGGCTTCACGTGCATTAGGTCACTGTCAGTGTGGGGATGTTATGGGATATACAGGCTaGCCTTGCCAGCCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SVHAEASRALGHCQCGDVMGYTG*PCQPRG
Trigger: ACCTCTTGGCTGGCAAGGTCAGCCTGTATATCCCAT...AACATCCCCACACTGACAGTGACCTAATGCACGTGAAGCCTCAGCATGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR TCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLVTIAG*GMPVVW
Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp GGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTGTTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRPWRQSGFSTSFHLQKRCSCLT*GVTIAG
Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAACA...CCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp TGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGATTTCTCTGTTCATGCTaGGGCTTCACGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: WAGRGDSLGFQQASISRRFLCSC*GFTCIR
Trigger: CCTAATGCACGTGAAGCCTCAGCATGAACAGAGAAA...TCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp CGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGTTTCTCTGTTCATGCTaGGGCTTCACGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: RGDSLGFQQASISRRGPGFLCSC*GFTCIR
Trigger: CCTAATGCACGTGAAGCCTCAGCATGAACAGAGAAA...CCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp CCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGAGAGGCTTCTTAATGTaGGGTCTTTTTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PWRQSGFSTSFHLQKRSWRGFLM*GLFGSC
Trigger: GCAGGAGCCAAAAAGACCTCACATTAAGAAGCCTCT...CCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp CCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGTTTGCACGTTGGGAATaGGCTTCGTTTTCCACCATG +
Preference number: 4 (lower is better)
Translates to: PWRQSGFSTSFHLQKRSWFARWE*ASFSTM
Trigger: CATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAA...CCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTGTTCAAATGCCTGGCTaGAGGGTGCAGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVVQMPG*RVQQGS
Trigger: AGAACCTTGCTGCACCCTTCAGCCAGGCATTTGAAC...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR GCA 90 bp CTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGTGCCCCAAAAGAAGGTaGAAGGATCAGAAGATAACG +
Preference number: 4 (lower is better)
Translates to: LGFQQASISRRGPGVAALCPKRR*KDQKIT
Trigger: CGTTATCTTCTGATCCTTGCACCTTCTTTTGGGGCA...CAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR GCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTACCGCATGGGATGGCTaGACCACGGGCACTTTATTT +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVTAWDG*TTGTLF
Trigger: AAATAAAGTGCCCGTGGTGCAGCCATCCCATGCGGT...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR GCA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTGGTCTTTTTGGCTCCTaGTCCTTTCTCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGGLFGS*SFLCSC
Trigger: GCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACC...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTGGTCTTTTTGGCTCCTaGTCCTTTCTCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SRERACHLLPRIWLIAALGLFGS*SFLCSC
Trigger: GCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACC...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR GCA 90 bp GGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGGTCTTTTTGGCTCCTaGTCCTTTCTCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: GDSLGFQQASISRRGPGVGLFGS*SFLCSC
Trigger: GCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACC...GACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp CTACTGAACACCTTACAAGGGCGGAGAAGCCACTATGTGTTACAGGCAATTCACTCACGGGAGAGGGCATaGCACCTTCTGCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: LLNTLQGRRSHYVLQAIHSRERA*HLLPRI
Trigger: GATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA...GTGAATTGCCTGTAACACATAGTGGCTTCTCCGCCCTTGTAAGGTGTTCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGGTTACAGGTTTGGATaGAAGATGCTCTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TGQAVETVWVFNKLPSPEGYRFG*KMLWEV
Trigger: CACTTCCCAGAGCATCTTGCATCCAAACCTGTAACC...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR GCA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTGGTTACAGGTTTGGATaGAAGATGCTCTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGGYRFG*KMLWEV
Trigger: CACTTCCCAGAGCATCTTGCATCCAAACCTGTAACC...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp GTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGATGGATGTGCTGGTTaGTGGCTCCAGTTGCGCATG +
Preference number: 4 (lower is better)
Translates to: VDERGVGSDCLYGSASLADGCAG*WLQLRM
Trigger: CATGCGCAACTGGAGCCAGCAACCAGCACATCCATC...TGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTTTGTCTGGCCACCTCTaGCATTGGGATAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVLSGHL*HWDREG
Trigger: GCCTTCTCTATCCCAATGGCAGAGGTGGCCAGACAA...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATCATCGGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALFWNLALAVDERGVGSDHRGVL*PCRGRA
Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCCGATG...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp AGTGTGGGGATGTTCCTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGTAGAGGCCTCCATCTaGATGCTTTCCGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: SVGMFLFDLRCYNSWMRDVEASI*MLSVIG
Trigger: CCCGATGACGGAAAGCATCCAGATGGAGGCCTCTAC...ATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAACAGGAACATCCCCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp TTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGAGCTGGAGGATGTCTaGACATGCCTTGTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: FSTSFHLQKRSWGRCLGFELEDV*TCLVWS
Trigger: ACTCCAAACAAGGCATGTCCAGACATCCTCCAGCTC...AAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTAGGGATATCAGGAGCTaGAGGATGTCTGGACATGCC +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVRDIRS*RMSGHA
Trigger: GGCATGTCCAGACATCCTCCAGCTCCTGATATCCCT...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp CTACTGAACACCTTACAAGGGCGGAGAAGCCACTATGTGTTACAGGCAATTCACTTGCCAGCCAAGAGGTaGGGTGATCTGTCCAACACC +
Preference number: 4 (lower is better)
Translates to: LLNTLQGRRSHYVLQAIHLPAKR*GDLSNT
Trigger: GGTGTTGGACAGATCACCCCACCTCTTGGCTGGCAA...GTGAATTGCCTGTAACACATAGTGGCTTCTCCGCCCTTGTAAGGTGTTCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp AGTGTGGGGATGTTCCTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATTTGCCAGCCAAGAGGTaGGGTGATCTGTCCAACACC +
Preference number: 4 (lower is better)
Translates to: SVGMFLFDLRCYNSWMRDLPAKR*GDLSNT
Trigger: GGTGTTGGACAGATCACCCCACCTCTTGGCTGGCAA...ATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAACAGGAACATCCCCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp TGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTGCCGTGGAGACAGTCTaGGTTTTCAACAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: WRQSGFSTSFHLQKRSWGAVETV*VFNKLP
Trigger: TGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGC...ACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGGAAAGGTTACAGGTTTaGATGCAAGATGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GRPWRQSGFSTSFHLQKRERLQV*MQDALG
Trigger: TCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTC...CCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTAGGTTTGTGCTTGTCTaGCCACCTCTGCCATTGGGA +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVRFVLV*PPLPLG
Trigger: TCCCAATGGCAGAGGTGGCCAGACAAGCACAAACCT...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp GAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGGGAGGGAAAAGGCGTTaGTTAAATCATTCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ETVWVFNKLPSPEEVLGSGGKRR*LNHSGV
Trigger: GACACCCGAATGATTTAACCAACGCCTTTTCCCTCC...CGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTGGCCACCTCTGCCATTaGGATAGAGAAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVGHLCH*DREGRS
Trigger: AGATCTGCCTTCTCTATCCCAATGGCAGAGGTGGCC...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTTTACCAGCCAAGAGGTaGGGTGATCTGTCCAACACC +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVLPAKR*GDLSNT
Trigger: GGTGTTGGACAGATCACCCCACCTCTTGGCTGGTAA...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512172.1
3UTR CAA 72 bp CAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTaGGATGCAAGATGCTCTGGGAAGTGCACGCAGATA +
Preference number: 4 (lower is better)
Translates to: QPSYRPCRKVTG*DARCSGKCTQI
Trigger: TATCTGCGTGCACTTCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTTCACCAAGGAAGACTTaGTGTCAGCTAAATCGCCTT +
Preference number: 4 (lower is better)
Translates to: SRERACHLLPRIWLIAALSPRKT*CQLNRL
Trigger: AAGGCGATTTAGCTGACATCAAGTCTTCCTTGGTGA...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp TGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGATGTTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: WAGRGDSLGFQQASISRRCSCLT*GVTIAG
Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAACA...TCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp TTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGACCTTTCTCTGTTCATGCTaGGGCTTCACGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: FDLRCYNSWMRDASCVGTFLCSC*GFTCIR
Trigger: CCTAATGCACGTGAAGCCTCAGCATGAACAGAGAAA...GGTCCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR TCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAAGAGGGAACTCTTCCATaGACTCCTCCACTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSEEGTLP*TPPLGC
Trigger: GCACCCCAGTGGAGGAGTTCATGGAAGAGTTCCCTC...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGACCGGGAATCATATaGTGGGAAAACCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSGPGII*WENQPR
Trigger: TCTTGGCTGGTTTTCCCATCATATGATTCCCGGTCC...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp CCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGTGTAGTTACCCCGGATaGCGACTTAGTAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PQGKIDVSVPLGSTGQAVCSYPG*RLSSLF
Trigger: AAACAAACTACTAAGTCGGCATCCGGGGTAACTACA...CACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGGGTCTTTTTGGCTCCTaGTCCTTTCTCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRGLFGS*SFLCSC
Trigger: GCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACC...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp TTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAAGGTCCTGGGGTCGCTaGCTTGGCTTTGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: LSLWISVSSSDLRVKLMSRSWGR*LGFARW
Trigger: CCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCT...TGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTGAACATGTGTTCAAATaGCTGGCTGAAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVEHVFK*LAEGCS
Trigger: GCTGCACCCTTCAGCCAGGCATTTGAACACATGTTC...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp ATGCTCAGCACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGATCTCCGCTCCGCTGTaGGAGCACCCGCGCAACAGC +
Preference number: 4 (lower is better)
Translates to: MLSTLTQTGMTNVRMTVLISAPL*EHPRNS
Trigger: GCTGTTGCGCGGGTGCTCCCACAGCGGAGCGGAGAT...CAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGTGCTGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp TTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCATCGGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LWISVSSSDLRVKLMSVFHRGVL*PCRGRA
Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCCGATG...GAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp ACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATGGAGCTGGAGGATGTCTaGACATGCCTTGTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TGKCSQVTVLAERLQVWMELEDV*TCLVWS
Trigger: ACTCCAAACAAGGCATGTCCAGACATCCTCCAGCTC...CATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTGAGCTGGAGGATGTCTaGACATGCCTTGTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVELEDV*TCLVWS
Trigger: ACTCCAAACAAGGCATGTCCAGACATCCTCCAGCTC...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp TCTGTTCATGCTGAGGCTTCACGTGCATTAGGTCACTGTCAGTGTGGGGATGTTGGGAAAACCTGGACATaGAAGTGTCGACTGACAGTG +
Preference number: 4 (lower is better)
Translates to: SVHAEASRALGHCQCGDVGKTWT*KCRLTV
Trigger: CACTGTCAGTCGACACTTCCATGTCCAGGTTTTCCC...AACATCCCCACACTGACAGTGACCTAATGCACGTGAAGCCTCAGCATGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp GCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTTATGATGGGAAAACCTaGACATGGAAGTGTCGACTG +
Preference number: 4 (lower is better)
Translates to: AGRGDSLGFQQASISRRGYDGKT*TWKCRL
Trigger: CAGTCGACACTTCCATGTCCAGGTTTTCCCATCATA...ACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CCA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTTATGATGGGAAAACCTaGACATGGAAGTGTCGACTG +
Preference number: 4 (lower is better)
Translates to: SRERACHLLPRIWLIAALYDGKT*TWKCRL
Trigger: CAGTCGACACTTCCATGTCCAGGTTTTCCCATCATA...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTGGGATGCCAGTTGTGTaGGGACCAGGAGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKAGMPVV*GPGGPG
Trigger: TCCCGGTCCTCCTGGTCCCCACACAACTGGCATCCC...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp TCTGTTCATGCTGAGGCTTCACGTGCATTAGGTCACTGTCAGTGTGGGGATGTTAGGTCACTGTCAGTGTaGGGATGTTCCTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: SVHAEASRALGHCQCGDVRSLSV*GCSCLT
Trigger: GGTCAAACAGGAACATCCCCACACTGACAGTGACCT...AACATCCCCACACTGACAGTGACCTAATGCACGTGAAGCCTCAGCATGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTATGTGTTCAAATGCCTaGCTGAAGGGTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVMCSNA*LKGAAR
Trigger: CCTTGCTGCACCCTTCAGCCAGGCATTTGAACACAT...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR TCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAACCTTCCTCTTCGGGATaGCTGATCTCGGCGAAGATC +
Preference number: 4 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSEPSSSG*LISAKI
Trigger: GATCTTCGCCGAGATCAGTCATCCCGAAGAGGAAGG...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp TTATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGCGTTGCTGGCCGGGATaGTTTCAGACTCGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LCFILELGSCSRRKRGWQRCWPG*FQTRSP
Trigger: TGGTGAACGAGTCTGAAATCATCCCGGCCAGCAACG...CTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp GGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCAAGAAAGAGATCCATTTaGCATGTATGGGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: GPGVAALALHVGNELRFPRKRSI*HVWVVI
Trigger: AATAACGACCCATACATGTCAAATGGATCTCTTTCT...TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp ACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTAGAAAGAGATCCATTTaGCATGTATGGGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: TSFHLQKRSWGRCLGFARRKRSI*HVWVVI
Trigger: AATAACGACCCATACATGTCAAATGGATCTCTTTCT...ACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR TCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTTGCCTTGTTTGGAGTTaGCATCTGATGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVCLVWS*HLMGCV
Trigger: CACACATCCCATCAGATGTCAACTCCAAACAAGGCA...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR TCA 90 bp AGTGTGGGGATGTTCCTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SVGMFLFDLRCYNSWMRDVTIAG*GMPVVW
Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...ATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAACAGGAACATCCCCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR TCA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCATTTCTCTGTTCATGCTaGGGCTTCACGTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSFLCSC*GFTCIR
Trigger: CCTAATGCACGTGAAGCCTCAGCATGAACAGAGAAA...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGTGCCCCAAAAGAAGGTaGAAGGATCAGAAGATAACG +
Preference number: 4 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRCPKRR*KDQKIT
Trigger: CGTTATCTTCTGATCCTTGCACCTTCTTTTGGGGCA...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAACTCCTGAGAGGTTTGTaGTTGTCTGGCCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSELLRGL*LSGHLV
Trigger: CACGAGGTGGCCAGACAAGCACAAACCTCTCAGGAG...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp CGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGACCATAATTGTCTCTTaGAGACCAGCCTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: RGDSLGFQQASISRRGPGTIIVS*RPAWIK
Trigger: CTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGT...CCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTACCATAATTGTCTCTTaGAGACCAGCCTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGTIIVS*RPAWIK
Trigger: CTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGT...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp TTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGACCATAATTGTCTCTTaGAGACCAGCCTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: FQQASISRRGPGVAALALTIIVS*RPAWIK
Trigger: CTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGT...CAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR GCA 90 bp CTACTGAACACCTTACAAGGGCGGAGAAGCCACTATGTGTTACAGGCAATTCACCGCATGACAGGCAAATaGAGCCAAGTTACCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LLNTLQGRRSHYVLQAIHRMTGK*SQVTVL
Trigger: AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCG...GTGAATTGCCTGTAACACATAGTGGCTTCTCCGCCCTTGTAAGGTGTTCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAAAGGTTTGTGCTTGTCTaGCCACCTCGTGTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSERFVLV*PPRVRC
Trigger: GCAACGGACACGAGGTGGCCAGACAAGCACAAACCT...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATCATCGGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHHRGVL*PCRGRA
Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCCGATG...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp TTATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGGTAGAGGCCTCCATCTaGATGCTTTCCGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: LCFILELGSCSRRKRGWQVEASI*MLSVIG
Trigger: CCCGATGACGGAAAGCATCCAGATGGAGGCCTCTAC...CTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp AAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGTCGTTATTCATATTTaGCATCATTATGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: KLPSPEEVLGSLPWLCTLVVIHI*HHYVPG
Trigger: TCCGGGTACATAATGATGCCAAATATGAATAACGAC...CAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGGAAAGGTTACAGGTTTaGATGCAAGATGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRERLQV*MQDALG
Trigger: TCCCAGAGCATCTTGCATCCAAACCTGTAACCTTTC...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp CTTCTTAATGTGAGGTCTTTTTGGCTCCTGCTCCTTTCTCTGTTCATGCTGAGGAGGTTTGTGCTTGTCTaGCCACCTCTGCCATTGGGA +
Preference number: 4 (lower is better)
Translates to: LLNVRSFWLLLLSLFMLRRFVLV*PPLPLG
Trigger: TCCCAATGGCAGAGGTGGCCAGACAAGCACAAACCT...CCTCAGCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACCTCACATTAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR TCA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATCCTTCCTCTTCGGGATaGCTGATCTCGGCGAAGATC +
Preference number: 4 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHPSSSG*LISAKI
Trigger: GATCTTCGCCGAGATCAGTCATCCCGAAGAGGAAGG...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp TTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCACGGGCACTTTATTTaGTGTTCTCGGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: LWISVSSSDLRVKLMSVFHGHFI*CSRDGW
Trigger: CCACCCATCCCGAGAACATCAAATAAAGTGCCCGTG...GAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGACCATAATTGTCTCTTaGAGACCAGCCTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLTIIVS*RPAWIK
Trigger: CTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGT...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR GCA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGAATAGGGCTGCCAATTaGTACCAACAGAGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ALAVDERGVGSDCLYGSANRAAN*YQQSGF
Trigger: AAACCCACTCTGTTGGTAGCAATTGGCAGCCCTATT...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGTCGTTATTCATATTTaGCATCATTATGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: GCWLQLRMTGKCSQVTVLVVIHI*HHYVPG
Trigger: TCCGGGTACATAATGATGCCAAATATGAATAACGAC...AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTGTCGTTATTCATATTTaGCATCATTATGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: GFQQASISRRGPGVAALAVVIHI*HHYVPG
Trigger: TCCGGGTACATAATGATGCCAAATATGAATAACGAC...AGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCATTGATGTTCTCGGGATaGGTGGAGAAAGAGATCCAT +
Preference number: 4 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSLMFSG*VEKEIH
Trigger: ATGGATCTCTTTCTCCACCCATCCCGAGAACATCAA...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTTTGATGTTCTCGGGATaGGTGGAGAAAGAGATCCAT +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVLMFSG*VEKEIH
Trigger: ATGGATCTCTTTCTCCACCCATCCCGAGAACATCAA...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATAGGTCACTGTCAGTGTaGGGATGTTCCTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: ALFWNLALAVDERGVGSDRSLSV*GCSCLT
Trigger: GGTCAAACAGGAACATCCCCACACTGACAGTGACCT...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp TGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACCCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: CYQQSGFGYYIYLALLNTLGSLP*LCTLGM
Trigger: CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG...GGTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCCTCCAGAAGAGGTCCTaGGGTCGCTGCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGLQKRS*GRCLGF
Trigger: AAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAG...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAATTGCTACCAACAGAGTaGGTTTGGCTATTACATTTA +
Preference number: 4 (lower is better)
Translates to: DGCAGCWLQLRMTGKCSQLLPTE*VWLLHL
Trigger: TAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAA...TTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp TTATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGAAGATCTTTTCCTTCTaGGGATCGCCCTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LCFILELGSCSRRKRGWQKIFSF*GSPSSL
Trigger: CAAGGACGAGGGCGATCCTCAGAAGGAAAAGATCTT...CTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTCGTTGCTGGCCGGGATaGTTTCAGACTCGTTCACCA +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKARCWPG*FQTRSP
Trigger: TGGTGAACGAGTCTGAAATCATCCCGGCCAGCAACG...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTAGAAAGAGATCCATTTaGCATGTATGGGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGRKRSI*HVWVVI
Trigger: AATAACGACCCATACATGTCAAATGGATCTCTTTCT...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp AGTGTGGGGATGTTCCTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATTGTTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SVGMFLFDLRCYNSWMRDCSCLT*GVTIAG
Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAACA...ATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAACAGGAACATCCCCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR TCA 90 bp TTGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACGGCTCCAGTTGCGCATaGCAGGCAAATGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLPTEWVWLLHLFSSTEHGSSCA*QANAAK
Trigger: CTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCC...GTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATACCGCATGGGATGGCTaGACCACGGGCACTTTATTT +
Preference number: 4 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHTAWDG*TTGTLF
Trigger: AAATAAAGTGCCCGTGGTGCAGCCATCCCATGCGGT...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR GCA 90 bp CTTCTTAATGTGAGGTCTTTTTGGCTCCTGCTCCTTTCTCTGTTCATGCTGAGGGGTCTTTTTGGCTCCTaGTCCTTTCTCTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: LLNVRSFWLLLLSLFMLRGLFGS*SFLCSC
Trigger: GCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACC...CCTCAGCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACCTCACATTAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp TGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACCGGGGTAACTCAAGGGTaGGGGAGGAAAGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: CYQQSGFGYYIYLALLNTGVTQG*GRKGEL
Trigger: CAACTCTCCTTTCCTCCCCCACCCTTGAGTTACCCC...GGTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp TTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGGTCGTTATTCATATTTaGCATCATTATGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: FQQASISRRGPGVAALALVVIHI*HHYVPG
Trigger: TCCGGGTACATAATGATGCCAAATATGAATAACGAC...CAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CCA 90 bp GTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCATTGATGTTCTCGGGATaGGTGGAGAAAGAGATCCAT +
Preference number: 4 (lower is better)
Translates to: VDERGVGSDCLYGSASLALMFSG*VEKEIH
Trigger: ATGGATCTCTTTCTCCACCCATCCCGAGAACATCAA...TGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp TATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGAGCTGGAGGATGTCTaGACATGCCTTGTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: YALFWNLALAVDERGVGSELEDV*TCLVWS
Trigger: ACTCCAAACAAGGCATGTCCAGACATCCTCCAGCTC...ACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CCA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATAGGGATATCAGGAGCTaGAGGATGTCTGGACATGCC +
Preference number: 4 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHRDIRS*RMSGHA
Trigger: GGCATGTCCAGACATCCTCCAGCTCCTGATATCCCT...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp ACTATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAAGGTCACTGTCAGTGTaGGGATGTTCCTGTTTGACC +
Preference number: 4 (lower is better)
Translates to: TMCYRQFTEKPLTRQAVSRSLSV*GCSCLT
Trigger: GGTCAAACAGGAACATCCCCACACTGACAGTGACCT...TGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTCCAACAGAGTGGGTTTaGCTATTACATTTATTTAGC +
Preference number: 4 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGPTEWV*LLHLFS
Trigger: GCTAAATAAATGTAATAGCCAAACCCACTCTGTTGG...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp TTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCACCTCTTCGGGATGACTaGTCTCGGCGAAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: LSLWISVSSSDLRVKLMSPLRDD*SRRRSF
Trigger: AAAAGATCTTCGCCGAGATCAGTCATCCCGAAGAGG...TGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTGTTCTGCCTTGTTTGGAGTTaGCATCTGATGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: LWISVSSSDLRVKLMSVFCLVWS*HLMGCV
Trigger: CACACATCCCATCAGATGTCAACTCCAAACAAGGCA...GAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTTGCCTTGTTTGGAGTTaGCATCTGATGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: YALFWNLALAVDERGVGSCLVWS*HLMGCV
Trigger: CACACATCCCATCAGATGTCAACTCCAAACAAGGCA...ACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTATGGGATATACAGGCTaGCCTTGCCAGCCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKAMGYTG*PCQPRG
Trigger: ACCTCTTGGCTGGCAAGGTCAGCCTGTATATCCCAT...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp TTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTGTTCTTTGCACGTTGGGAATaGGCTTCGTTTTCCACCATG +
Preference number: 4 (lower is better)
Translates to: LWISVSSSDLRVKLMSVFFARWE*ASFSTM
Trigger: CATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAA...GAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTCCTTGCTTGTTGATGTaGAATTTCTTCAACTCCACA +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVPCLLM*NFFNST
Trigger: TGTGGAGTTGAAGAAATTTCACATCAACAAGCAAGG...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR GCA 90 bp TTGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACCAGAAGGGCCCCGTTTaGCCCAAAAGAAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LLPTEWVWLLHLFSSTEHQKGPV*PKRRCK
Trigger: CTTGCACCTTCTTTTGGGGCAAACGGGGCCCTTCTG...GTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCACCGCATGGGATGGCTaGACCACGGGCACTTTATTT +
Preference number: 4 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGTAWDG*TTGTLF
Trigger: AAATAAAGTGCCCGTGGTGCAGCCATCCCATGCGGT...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp CTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTACCATAATTGTCTCTTaGAGACCAGCCTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: LAVDERGVGSDCLYGSASTIIVS*RPAWIK
Trigger: CTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGT...AGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR GCA 90 bp TGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACCGGTTTGGATGCAAGATaGTCTGGGAAGTGCACGCAG +
Preference number: 4 (lower is better)
Translates to: CYQQSGFGYYIYLALLNTGLDAR*SGKCTQ
Trigger: CTGCGTGCACTTCCCAGAGCATCTTGCATCCAAACC...GGTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp ACTATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCACCAAGTTACCGTCCTTaGCGAAAGGTTACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: TMCYRQFTEKPLTRQAVSPSYRP*RKVTGL
Trigger: CAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGG...TGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp CTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGGTCGTTATTCATATTTaGCATCATTATGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: LFDLRCYNSWMRDASCVGVVIHI*HHYVPG
Trigger: TCCGGGTACATAATGATGCCAAATATGAATAACGAC...CCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATGAGCTGGAGGATGTCTaGACATGCCTTGTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHELEDV*TCLVWS
Trigger: ACTCCAAACAAGGCATGTCCAGACATCCTCCAGCTC...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATGGGAAAACCTGGACATaGAAGTGTCGACTGACAGTG +
Preference number: 4 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHGKTWT*KCRLTV
Trigger: CACTGTCAGTCGACACTTCCATGTCCAGGTTTTCCC...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp CTTCTTAATGTGAGGTCTTTTTGGCTCCTGCTCCTTTCTCTGTTCATGCTGAGGTATGATGGGAAAACCTaGACATGGAAGTGTCGACTG +
Preference number: 4 (lower is better)
Translates to: LLNVRSFWLLLLSLFMLRYDGKT*TWKCRL
Trigger: CAGTCGACACTTCCATGTCCAGGTTTTCCCATCATA...CCTCAGCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACCTCACATTAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CCA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCAAACCAGCCAAGAGGTaGGGTGATCTGTCCAACACC +
Preference number: 4 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGKPAKR*GDLSNT
Trigger: GGTGTTGGACAGATCACCCCACCTCTTGGCTGGTTT...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379951.6
CDS-3UTR CCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTAGGCTTCCTAAAAGGTaGTGGTGGTGGTGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKARLPKR*WWWWLG
Trigger: CCCTAACCACCACCACCACCACCTTTTAGGAAGCCT...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTAAGATCTTTTCCTTCTaGGGATCGCCCTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKAKIFSF*GSPSSL
Trigger: CAAGGACGAGGGCGATCCTCAGAAGGAAAAGATCTT...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTCCTCTTCGGGATGACTaGTCTCGGCGAAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKAPLRDD*SRRRSF
Trigger: AAAAGATCTTCGCCGAGATCAGTCATCCCGAAGAGG...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp ACTATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCATCACCAAGGAAGACTTaGTGTCAGCTAAATCGCCTT +
Preference number: 4 (lower is better)
Translates to: TMCYRQFTEKPLTRQAVSSPRKT*CQLNRL
Trigger: AAGGCGATTTAGCTGACATCAAGTCTTCCTTGGTGA...TGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAATCACCAAGGAAGACTTaGTGTCAGCTAAATCGCCTT +
Preference number: 4 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSESPRKT*CQLNRL
Trigger: AAGGCGATTTAGCTGACATCAAGTCTTCCTTGGTGA...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR TCA 90 bp TTATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTCACCAAGGAAGACTTaGTGTCAGCTAAATCGCCTT +
Preference number: 4 (lower is better)
Translates to: LCFILELGSCSRRKRGWQSPRKT*CQLNRL
Trigger: AAGGCGATTTAGCTGACATCAAGTCTTCCTTGGTGA...CTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGAGAAAGAGATCCATTTaGCATGTATGGGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: ALAVDERGVGSDCLYGSARKRSI*HVWVVI
Trigger: AATAACGACCCATACATGTCAAATGGATCTCTTTCT...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTAGAAAGAGATCCATTTaGCATGTATGGGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVRKRSI*HVWVVI
Trigger: AATAACGACCCATACATGTCAAATGGATCTCTTTCT...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR TCA 90 bp TTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTGTTCTGTTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LWISVSSSDLRVKLMSVFCSCLT*GVTIAG
Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAACA...GAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR TCA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCAAGTGCACGCAGATATaGGGGGAGAAAAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGKCTQI*GEKSCS
Trigger: TGAGCAGCTTTTCTCCCCTCATATCTGCGTGCACTT...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTAGTTACCCCGGATaGCGACTTAGTAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ALFWNLALAVDERGVGSDCSYPG*RLSSLF
Trigger: AAACAAACTACTAAGTCGGCATCCGGGGTAACTACA...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTGTCGTTATTCATATTTaGCATCATTATGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVVVIHI*HHYVPG
Trigger: TCCGGGTACATAATGATGCCAAATATGAATAACGAC...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CCA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCGGATGCAAGATGCTCTaGGAAGTGCACGCAGATATG +
Preference number: 4 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGGCKML*EVHADM
Trigger: CATATCTGCGTGCACTTCCCAGAGCATCTTGCATCC...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCACCAACAGAGTGGGTTTaGCTATTACATTTATTTAGC +
Preference number: 4 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSPTEWV*LLHLFS
Trigger: GCTAAATAAATGTAATAGCCAAACCCACTCTGTTGG...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCATTGCTACCAACAGAGTaGGTTTGGCTATTACATTTA +
Preference number: 4 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSLLPTE*VWLLHL
Trigger: TAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAA...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTCTTCCTAAAAGGTGGTaGTGGTGGTGGTTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKALPKRW*WWWLGE
Trigger: TTCCCCTAACCACCACCACCACCACCTTTTAGGAAG...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTTCCATGAATGGAAAGTaGAGGAACATGTGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVSMNGK*RNMCSN
Trigger: ATTTGAACACATGTTCCTCCACTTTCCATTCATGGA...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTTGCCTTGTTTGGAGTTaGCATCTGATGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKACLVWS*HLMGCV
Trigger: CACACATCCCATCAGATGTCAACTCCAAACAAGGCA...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTAGAGGCTTCTTAATGTaGGGTCTTTTTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKARGFLM*GLFGSC
Trigger: GCAGGAGCCAAAAAGACCTCACATTAAGAAGCCTCT...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp TTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCATGCAAACCAGTCTGCTaGACGCATCTGTTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LSLWISVSSSDLRVKLMSCKPVC*THLLRF
Trigger: AAACCTTAACAGATGCGTTCAGCAGACTGGTTTGCA...TGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp TTGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACCGCATGACAGGCAAATaGAGCCAAGTTACCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LLPTEWVWLLHLFSSTEHRMTGK*SQVTVL
Trigger: AAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCG...GTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR GCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTAAAGCAGAGCACACGTaGATTAGGTCACTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKAKAEHT*IRSLSV
Trigger: CACTGACAGTGACCTAATGCACGTGTGCTCTGCTTT...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp CTTCTTAATGTGAGGTCTTTTTGGCTCCTGCTCCTTTCTCTGTTCATGCTGAGGAGAAAGAGATCCATTTaGCATGTATGGGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: LLNVRSFWLLLLSLFMLRRKRSI*HVWVVI
Trigger: AATAACGACCCATACATGTCAAATGGATCTCTTTCT...CCTCAGCATGAACAGAGAAAGGAGCAGGAGCCAAAAAGACCTCACATTAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTTGTTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKACSCLT*GVTIAG
Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAACA...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTTTGATGTTCTCGGGATaGGTGGAGAAAGAGATCCAT +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKALMFSG*VEKEIH
Trigger: ATGGATCTCTTTCTCCACCCATCCCGAGAACATCAA...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CCA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATGTCGTTATTCATATTTaGCATCATTATGTACCCGGA +
Preference number: 4 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHVVIHI*HHYVPG
Trigger: TCCGGGTACATAATGATGCCAAATATGAATAACGAC...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTAGAAAGAGATCCATTTaGCATGTATGGGTCGTTATT +
Preference number: 4 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKARKRSI*HVWVVI
Trigger: AATAACGACCCATACATGTCAAATGGATCTCTTTCT...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS CCA 90 bp GGGGACGCCCCGAGCTTGGCCGCGTGCGAGGCTCCGGGCGCGTCCTaGTTCCTCGGCCCGAGAGCGCGCAGCCCGGGTCCCTCCTCCGCG +
Preference number: 5 (lower is better)
Translates to: GDAPSLAACEAPGAS*FLGPRARSPGPSSA
Trigger: CGCGGAGGAGGGACCCGGGCTGCGCGCTCTCGGGCCGAGGAACCAGGACGCGCCCGGAGCCTCGCACGCGGCCAAGCTCGGGGCGTCCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS CCA 90 bp CGCGACCCCGCGTCGCCGGGATTTGCGCGCGGAGAACGCCGGTTCTaGAGGGAGCACGCCTCCCCAAAGTGCAGAGGAGGGTCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: RDPASPGFARGERRF*REHASPKCRGGSGG
Trigger: GCCGCCGGACCCTCCTCTGCACTTTGGGGAGGCGTGCTCCCTCCAGAACCGGCGTTCTCCGCGCGCAAATCCCGGCGACGCGGGGTCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS GCA 90 bp GCGCGCGGAGAACGCCGGTTCTGGAGGGAGCACGCCTCCCCAAAGTaGAGAGGAGGGTCCGGCGGCGCGTCTCCGCGGAAACCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: ARGERRFWREHASPK*RGGSGGASPRKPSP
Trigger: TGGAGAGGGTTTCCGCGGAGACGCGCCGCCGGACCCTCCTCTGCACTTTGGGGAGGCGTGCTCCCTCCAGAACCGGCGTTCTCCGCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS GCA 90 bp GTTCCCGGCTCGAGTTTCTCAGCCTGGCTCGCCGGCTCGCCGCTCTaGACGCCTCCGCCGGCCAGCTCTGTCAAAGCAAAGAGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: VPGSSFSAWLAGSPL*TPPPASSVKAKSCA
Trigger: GGCGCAGCTCTTTGCTTTGACAGAGCTGGCCGGCGGAGGCGTGCAGAGCGGCGAGCCGGCGAGCCAGGCTGAGAAACTCGAGCCGGGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS GCA 90 bp CACTGCGGAGTCTCGGGGAGTCACAGCGGGGGCCTCGGGCCCAAATaGCTCTGCCCGGAGCTCGAGCCGACACACACACTCAGTCCGACC +
Preference number: 5 (lower is better)
Translates to: HCGVSGSHSGGLGPK*LCPELEPTHTLSPT
Trigger: GGTCGGACTGAGTGTGTGTGTCGGCTCGAGCTCCGGGCAGAGGCATTTGGGCCCGAGGCCCCCGCTGTGACTCCCCGAGACTCCGCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS CCA 90 bp CACTCAGTCCGACCCCTCTTTGTTCCCGGCTCGAGTTTCTCAGCCTaGCTCGCCGGCTCGCCGCTCTGCACGCCTCCGCCGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: HSVRPLFVPGSSFSA*LAGSPLCTPPPASS
Trigger: AGAGCTGGCCGGCGGAGGCGTGCAGAGCGGCGAGCCGGCGAGCCAGGCTGAGAAACTCGAGCCGGGAACAAAGAGGGGTCGGACTGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS CCA 90 bp GTGGAGTGTCGGGTATCAGGGTCCATCCGCCCCCTAGACCAGCTCTaGACTAGGCTTCAAACAGCCCTCCAGCGCGGCCCTGCTCCGCGC +
Preference number: 5 (lower is better)
Translates to: VECRVSGSIRPLDQL*TRLQTALQRGPAPR
Trigger: GCGCGGAGCAGGGCCGCGCTGGAGGGCTGTTTGAAGCCTAGTCCAGAGCTGGTCTAGGGGGCGGATGGACCCTGATACCCGACACTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510624.5
ENST00000515500.5
CDS GCA 90 bp ATCGCCCGCAGCGGGCCAGAAGACCCGATAAAGCGCCTTCCACCCTaGAGGACTAGTGCCCGGCTTCCGCTGCTTCTCCGCCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: IARSGPEDPIKRLPP*RTSARLPLLLRLSS
Trigger: AGAAGAAAGGCGGAGAAGCAGCGGAAGCCGGGCACTAGTCCTGCAGGGTGGAAGGCGCTTTATCGGGTCTTCTGGCCCGCTGCGGGCGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505293.1
ENST00000515500.5
CDS CCA 90 bp GGAGAGTTGGGGCATCCCGGCGGCTCTGTAATCTCCGCTCCGCTGTaGGAGCACCCGCGCAACAGCAGGAAAGACAGAGGGGTAACTCAA +
Preference number: 5 (lower is better)
Translates to: GELGHPGGSVISAPL*EHPRNSRKDRGVTQ
Trigger: TTGAGTTACCCCTCTGTCTTTCCTGCTGTTGCGCGGGTGCTCCCACAGCGGAGCGGAGATTACAGAGCCGCCGGGATGCCCCAACTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp GGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCACCTCCTCCGGAGAGTaGGGGCATCCCGGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: GFSTSFHLQKRSWGRCLGTSSGE*GHPGGS
Trigger: AGAGCCGCCGGGATGCCCCAACTCTCCGGAGGAGGT...GCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CAA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGCGTCGCCGGGATTaGCGCGCGGAGAACGCCGGT +
Preference number: 5 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRPRRRD*RAENAG
Trigger: ACCGGCGTTCTCCGCGCGCAAATCCCGGCGACGCGG...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp ACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATGCCGCGTCGCCGGGATTaGCGCGCGGAGAACGCCGGT +
Preference number: 5 (lower is better)
Translates to: TGKCSQVTVLAERLQVWMPRRRD*RAENAG
Trigger: ACCGGCGTTCTCCGCGCGCAAATCCCGGCGACGCGG...CATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp GCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTACCTCCTCCGGAGAGTaGGGGCATCCCGGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: AGRGDSLGFQQASISRRGTSSGE*GHPGGS
Trigger: AGAGCCGCCGGGATGCCCCAACTCTCCGGAGGAGGT...ACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CAA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGACCTCCTCCGGAGAGTaGGGGCATCCCGGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRTSSGE*GHPGGS
Trigger: AGAGCCGCCGGGATGCCCCAACTCTCCGGAGGAGGT...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp AGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTGATGTCAGTGTTCCTTaGGGGTCGACTGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: RRGPGVAALALHVGNELRDVSVP*GSTGQA
Trigger: GGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC...ACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CAA 90 bp GATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTGGTTGCTGGCTCCAGTaGCGCATGACAGGCAAATGC +
Preference number: 5 (lower is better)
Translates to: DVSVPLGSTGQAVETVWVGCWLQ*RMTGKC
Trigger: GCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC...AACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS TCA 90 bp TCTACCGGATTTCCTCCAGAGGGTTTCCCAGTTGTGGAACAAGGGTaGCCAGTGGAGTGTCGGGTATCAGGGTCCATCCGCCCCCTAGAC +
Preference number: 5 (lower is better)
Translates to: STGFPPEGFPVVEQG*PVECRVSGSIRPLD
Trigger: GTCTAGGGGGCGGATGGACCCTGATACCCGACACTCCACTGGTCACCCTTGTTCCACAACTGGGAAACCCTCTGGAGGAAATCCGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510624.5
ENST00000515500.5
CDS-3UTR CAA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGAAAGAGCTGCGCCCCTaGAGTTCGCCCGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: ALAVDERGVGSDCLYGSAKELRP*SSPGRG
Trigger: CCCTCGGCCGGGCGAACTCAAGGGGCGCAGCTCTTT...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp GGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACAGTCCGACCCCTCTTaGTTCCCGGCTCGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: GPGVAALALHVGNELRFPQSDPS*FPARVS
Trigger: AGAAACTCGAGCCGGGAACAAAGAGGGGTCGGACTG...TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CAA 90 bp TGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGCCACCTCGTGTCCGTaGCTGGCCGGGATGATTTCA +
Preference number: 5 (lower is better)
Translates to: CAGCWLQLRMTGKCSQVTATSCP*LAGMIS
Trigger: TGAAATCATCCCGGCCAGCAACGGACACGAGGTGGC...GGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp CCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGCCACCTCGTGTCCGTaGCTGGCCGGGATGATTTCA +
Preference number: 5 (lower is better)
Translates to: PQGKIDVSVPLGSTGQAVATSCP*LAGMIS
Trigger: TGAAATCATCCCGGCCAGCAACGGACACGAGGTGGC...CACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp CTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGGGGCTCCTGAGAGGTTaGTGCTTGTCTGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: LGRPWRQSGFSTSFHLQKGLLRG*CLSGHL
Trigger: GAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCC...CTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp CAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGGATGAGGGATGCCAGTaGTGTGGGGACCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: QGKIDVSVPLGSTGQAVEDEGCQ*CGDQED
Trigger: GTCCTCCTGGTCCCCACACAACTGGCATCCCTCATC...CTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp AGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCGATGTCAGTGTTCCTTaGGGGTCGACTGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SLGFQQASISRRGPGVAADVSVP*GSTGQA
Trigger: GGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC...GGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CAA 90 bp TGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCCAGTCCGACCCCTCTTaGTTCCCGGCTCGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: CAGCWLQLRMTGKCSQVTQSDPS*FPARVS
Trigger: AGAAACTCGAGCCGGGAACAAAGAGGGGTCGGACTG...GGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTGCCACCTCGTGTCCGTaGCTGGCCGGGATGATTTCA +
Preference number: 5 (lower is better)
Translates to: SRERACHLLPRIWLIAALATSCP*LAGMIS
Trigger: TGAAATCATCCCGGCCAGCAACGGACACGAGGTGGC...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp TTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCCTGAGAGGTTTGTGCTaGTCTGGCCACCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: FNKLPSPEEVLGSLPWLCLRGLC*SGHLVS
Trigger: GGACACGAGGTGGCCAGACAAGCACAAACCTCTCAG...GCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CAA 90 bp GGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGCTGAGAGGTTTGTGCTaGTCTGGCCACCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: GRPWRQSGFSTSFHLQKRLRGLC*SGHLVS
Trigger: GGACACGAGGTGGCCAGACAAGCACAAACCTCTCAG...CCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CAA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGGGCTCCTGAGAGGTTaGTGCTTGTCTGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: TGQAVETVWVFNKLPSPEGLLRG*CLSGHL
Trigger: GAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCC...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp CCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGATGAGGGATGCCAGTaGTGTGGGGACCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: PWRQSGFSTSFHLQKRSWDEGCQ*CGDQED
Trigger: GTCCTCCTGGTCCCCACACAACTGGCATCCCTCATC...CCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp TTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTT +
Preference number: 5 (lower is better)
Translates to: FHLQKRSWGRCLGFARWEVAALA*HVGNEL
Trigger: AAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGAC...TTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp CTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTT +
Preference number: 5 (lower is better)
Translates to: LAPVAHDRQMQPSYRPCRVAALA*HVGNEL
Trigger: AAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGAC...TCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAACCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: TGQAVETVWVFNKLPSPEPGVAA*ALHVGN
Trigger: ATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGG...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp AAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGCTGAGAGGTTTGTGCTaGTCTGGCCACCTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: KLPSPEEVLGSLPWLCTLLRGLC*SGHLCH
Trigger: ATGGCAGAGGTGGCCAGACAAGCACAAACCTCTCAG...CAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS-3UTR CAA 90 bp GGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACAGAGGGTTTCCCAGTaGTGGAACAAGGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: GPGVAALALHVGNELRFPQRVSQ*WNKGDQ
Trigger: CTGGTCACCCTTGTTCCACAACTGGGAAACCCTCTG...TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS-3UTR CAA 90 bp GTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCCAAGAATAAAGTTTTaGCCGGCAAGCGCGGGGACT +
Preference number: 5 (lower is better)
Translates to: VLGSLPWLCTLGMSFVFHPRIKF*PASAGT
Trigger: AGTCCCCGCGCTTGCCGGCAAAAACTTTATTCTTGG...GTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CAA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGGCCACCTCGTGTCCGTaGCTGGCCGGGATGATTTCA +
Preference number: 5 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRATSCP*LAGMIS
Trigger: TGAAATCATCCCGGCCAGCAACGGACACGAGGTGGC...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTCTGAGAGGTTTGTGCTaGTCTGGCCACCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGLRGLC*SGHLVS
Trigger: GGACACGAGGTGGCCAGACAAGCACAAACCTCTCAG...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp TTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGACCGGGCTCCTGAGAGGTTaGTGCTTGTCTGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: FDLRCYNSWMRDASCVGTGLLRG*CLSGHL
Trigger: GAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCC...GGTCCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CAA 90 bp CTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGACCAGGAGGATATACAGGCTGACCTaGCCAGCCAAGAGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: LRCYNSWMRDASCVGTRRIYRLT*PAKRWG
Trigger: ACCCCACCTCTTGGCTGGCAAGGTCAGCCTGTATAT...CCTCCTGGTCCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CAA 90 bp GGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATGTGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTT +
Preference number: 5 (lower is better)
Translates to: GVAALALHVGNELRFPPCVAALA*HVGNEL
Trigger: AAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGAC...ACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp CTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTT +
Preference number: 5 (lower is better)
Translates to: LGSLPWLCTLGMSFVFHHVAALA*HVGNEL
Trigger: AAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGAC...ATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp AGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: SDLRVKLMSVFLWGRLGRPGVAA*ALHVGN
Trigger: ATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGG...CCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp TGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: WRQSGFSTSFHLQKRSWGPGVAA*ALHVGN
Trigger: ATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGG...ACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS CCA 90 bp GTCAGGACTTTTCTACCGGATTTCCTCCAGAGGGTTTCCCAGTTGTaGAACAAGGGTGACCAGTGGAGTGTCGGGTATCAGGGTCCATCC +
Preference number: 5 (lower is better)
Translates to: VRTFLPDFLQRVSQL*NKGDQWSVGYQGPS
Trigger: GGATGGACCCTGATACCCGACACTCCACTGGTCACCCTTGTTCCACAACTGGGAAACCCTCTGGAGGAAATCCGGTAGAAAAGTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510624.5
ENST00000515500.5
CDS-3UTR CAA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTGGGCTCCTGAGAGGTTaGTGCTTGTCTGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVGLLRG*CLSGHL
Trigger: GAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCC...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CAA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTATATACAGGCTGACCTaGCCAGCCAAGAGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: SRERACHLLPRIWLIAALIYRLT*PAKRWG
Trigger: ACCCCACCTCTTGGCTGGCAAGGTCAGCCTGTATAT...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGGATGAGGGATGCCAGTaGTGTGGGGACCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: ALAVDERGVGSDCLYGSADEGCQ*CGDQED
Trigger: GTCCTCCTGGTCCCCACACAACTGGCATCCCTCATC...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp CTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGCAGCTGTCATTCTaGGACCTGTACCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: LGRPWRQSGFSTSFHLQKRQLSF*DLYLMQ
Trigger: CTGCATCAGGTACAGGTCCAAGAATGACAGCTGCCT...CTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGATGTCAGTGTTCCTTaGGGGTCGACTGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSDVSVP*GSTGQA
Trigger: GGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp GGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCAGCCAAGTTACCGTCCTaGCCGAAAGGTTACAGGTTT +
Preference number: 5 (lower is better)
Translates to: GPGVAALALHVGNELRFPAKLPS*PKGYRF
Trigger: AAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGC...TGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS GCA 90 bp AAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTCGTTTTCCACCTGATGCAGATTCCT +
Preference number: 5 (lower is better)
Translates to: KLPSPEEVLGSLPWL*TLGMSFVFHLMQIP
Trigger: AGGAATCTGCATCAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379951.6
ENST00000505379.5
CDS CCA 90 bp TTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: FNKLPSPEEVLGSLP*LCTLGMSFVFHLMQ
Trigger: CTGCATCAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379951.6
ENST00000505379.5
CDS CCA 90 bp AATGCCTGGCTGAAGGGTGCAGCAAGGTTCTTACCAGCCAAGAGGTaGGGTGATCTGTCCAACACCACCCGGAGACAAGGGATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: NAWLKGAARFLPAKR*GDLSNTTRRQGIKS
Trigger: ACTTTTTATCCCTTGTCTCCGGGTGGTGTTGGACAGATCACCCCACCTCTTGGCTGGTAAGAACCTTGCTGCACCCTTCAGCCAGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CAA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGATGCCTTGTTTGGAGTaGACATCTGATGGGATGTGT +
Preference number: 5 (lower is better)
Translates to: PSPEEVLGSLPWLCTLGMMPCLE*TSDGMC
Trigger: ACACATCCCATCAGATGTCAACTCCAAACAAGGCAT...CATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp AGTGTGGGGATGTTCCTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGATGAGGGATGCCAGTaGTGTGGGGACCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: SVGMFLFDLRCYNSWMRDDEGCQ*CGDQED
Trigger: GTCCTCCTGGTCCCCACACAACTGGCATCCCTCATC...ATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAACAGGAACATCCCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CAA 90 bp GGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCAGGCAGCTGTCATTCTaGGACCTGTACCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: GDSLGFQQASISRRGPGVRQLSF*DLYLMQ
Trigger: CTGCATCAGGTACAGGTCCAAGAATGACAGCTGCCT...GACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp CAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCAGGCAGCTGTCATTCTaGGACCTGTACCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: QAVETVWVFNKLPSPEEVRQLSF*DLYLMQ
Trigger: CTGCATCAGGTACAGGTCCAAGAATGACAGCTGCCT...GACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp GATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGCCAAGTTACCGTCCTaGCCGAAAGGTTACAGGTTT +
Preference number: 5 (lower is better)
Translates to: DGCAGCWLQLRMTGKCSQAKLPS*PKGYRF
Trigger: AAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGC...TTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp CTGTTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGCTGAGAGGTTTGTGCTaGTCTGGCCACCTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: LFDLRCYNSWMRDASCVGLRGLC*SGHLCH
Trigger: ATGGCAGAGGTGGCCAGACAAGCACAAACCTCTCAG...CCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS GCA 90 bp AAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTCGTTTTCCACCTCAAGAAGGAACAA +
Preference number: 5 (lower is better)
Translates to: KLPSPEEVLGSLPWL*TLGMSFVFHLKKEQ
Trigger: TTGTTCCTTCTTGAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503879.5
CDS CCA 90 bp TTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: FNKLPSPEEVLGSLP*LCTLGMSFVFHLKK
Trigger: CTTCTTGAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503879.5
CDS-3UTR CAA 90 bp TGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACCAAAGAGCTGCGCCCCTaGAGTTCGCCCGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: CYQQSGFGYYIYLALLNTKELRP*SSPGRG
Trigger: CCCTCGGCCGGGCGAACTCAAGGGGCGCAGCTCTTT...GGTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATGGGCTCCTGAGAGGTTaGTGCTTGTCTGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: ALFWNLALAVDERGVGSDGLLRG*CLSGHL
Trigger: GAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCC...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAACTGGACATGCCTTGTTaGGAGTTGACATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: TGQAVETVWVFNKLPSPELDMPC*ELTSDG
Trigger: CCCATCAGATGTCAACTCCAAACAAGGCATGTCCAG...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp CCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGCTGGACATGCCTTGTTaGGAGTTGACATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: PWRQSGFSTSFHLQKRSWLDMPC*ELTSDG
Trigger: CCCATCAGATGTCAACTCCAAACAAGGCATGTCCAG...CCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTCTGGACATGCCTTGTTaGGAGTTGACATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: SRERACHLLPRIWLIAALLDMPC*ELTSDG
Trigger: CCCATCAGATGTCAACTCCAAACAAGGCATGTCCAG...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp CGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGCTGGACATGCCTTGTTaGGAGTTGACATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: RGDSLGFQQASISRRGPGLDMPC*ELTSDG
Trigger: CCCATCAGATGTCAACTCCAAACAAGGCATGTCCAG...CCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGATATACAGGCTGACCTaGCCAGCCAAGAGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: ALAVDERGVGSDCLYGSAIYRLT*PAKRWG
Trigger: ACCCCACCTCTTGGCTGGCAAGGTCAGCCTGTATAT...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CAA 90 bp GATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGACAGTCTGGGTTGCTTTATTTTGGAACTaGGCTCTTGCAGTAGACGAA +
Preference number: 5 (lower is better)
Translates to: DVSVPLGSTGQAVETVWVALFWN*ALAVDE
Trigger: TTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC...AACCCAGACTGTCTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp CGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTTAGGATGACAGTTTaGGGCAAAGGCTGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: RGDSLGFQQASISRRGPGVRMTV*GKGCAL
Trigger: CAAGGCACAGCCTTTGCCCAAAACTGTCATCCTAAC...CCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265165.6
CDS-3UTR CAA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTCTGAGAGGTTTGTGCTaGTCTGGCCACCTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVLRGLC*SGHLCH
Trigger: ATGGCAGAGGTGGCCAGACAAGCACAAACCTCTCAG...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS GCA 90 bp AAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTCGTTTTCCACCATGTTTCAGATGTA +
Preference number: 5 (lower is better)
Translates to: KLPSPEEVLGSLPWL*TLGMSFVFHHVSDV
Trigger: TACATCTGAAACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000504426.5
ENST00000505297.5
ENST00000507470.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000512407.5
ENST00000514444.5
CDS CCA 90 bp TTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATGTTTCA +
Preference number: 5 (lower is better)
Translates to: FNKLPSPEEVLGSLP*LCTLGMSFVFHHVS
Trigger: TGAAACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000504426.5
ENST00000505297.5
ENST00000507470.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000512407.5
ENST00000514444.5
CDS-3UTR CAA 90 bp CTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGTTCACCAAGGAAGACTaGATGTCAGCTAAATCGCCT +
Preference number: 5 (lower is better)
Translates to: LGRPWRQSGFSTSFHLQKFTKED*MSAKSP
Trigger: AGGCGATTTAGCTGACATCAAGTCTTCCTTGGTGAA...CTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CAA 90 bp ATGTGTTACAGGCAATTCACAGAGAAGCCACTTACCAGACAAGCTGTCTCAGAAGATGAGGGATGCCAGTaGTGTGGGGACCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: MCYRQFTEKPLTRQAVSEDEGCQ*CGDQED
Trigger: GTCCTCCTGGTCCCCACACAACTGGCATCCCTCATC...TTCTGAGACAGCTTGTCTGGTAAGTGGCTTCTCTGTGAATTGCCTGTAACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp CTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGATACCATAATTGTCTCTaGCAGACCAGCCTGGATAAA +
Preference number: 5 (lower is better)
Translates to: LAPVAHDRQMQPSYRPCRYHNCL*QTSLDK
Trigger: TTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTA...TCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp ACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTTACCATAATTGTCTCTaGCAGACCAGCCTGGATAAA +
Preference number: 5 (lower is better)
Translates to: TSFHLQKRSWGRCLGFARYHNCL*QTSLDK
Trigger: TTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTA...ACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp TGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAAGTTACCGACCTCAGGGTAAAATaGATGTCAGTGTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: CAGCWLQLRMTGKCSQVTDLRVK*MSVFLW
Trigger: CCAAAGGAACACTGACATCAATTTTACCCTGAGGTC...GGTAACTTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp CCTCAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGACCTCAGGGTAAAATaGATGTCAGTGTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: PQGKIDVSVPLGSTGQAVDLRVK*MSVFLW
Trigger: CCAAAGGAACACTGACATCAATTTTACCCTGAGGTC...CACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp TTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGTGGAGGGAAAAGGCGTaGGTTAAATCATTCGGGTGT +
Preference number: 5 (lower is better)
Translates to: FQQASISRRGPGVAALALWREKA*VKSFGC
Trigger: ACACCCGAATGATTTAACCAACGCCTTTTCCCTCCA...CAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS-3UTR CAA 90 bp GTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGATCCTCCAAGTTTCTTaGGAGGGAAAAGGCGTTGGT +
Preference number: 5 (lower is better)
Translates to: VETVWVFNKLPSPEEVLGILQVS*EGKGVG
Trigger: ACCAACGCCTTTTCCCTCCAAAGAAACTTGGAGGAT...CCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510624.5
CDS CCA 90 bp TTGAACGCAAAAGAGCGAATGAGTGAGAGTGGAGAGCCACTGGTATaGAGGAGGGGCTTACATAATTGTCTCTTGCAGACCAGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: LNAKERMSESGEPLV*RRGLHNCLLQTSLD
Trigger: ATCCAGGCTGGTCTGCAAGAGACAATTATGTAAGCCCCTCCTCCATACCAGTGGCTCTCCACTCTCACTCATTCGCTCTTTTGCGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505328.1
CDS-3UTR CAA 90 bp CAGGGTAAAATTGATGTCAGTGTTCCTTTGGGGTCGACTGGGCAGGCCGTGGAGTGCCGACTTAGTAGTTaGTTTTCCGAGAAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: QGKIDVSVPLGSTGQAVECRLSS*FSEKRE
Trigger: CTCTCTTTTCTCGGAAAACAAACTACTAAGTCGGCA...CTCCACGGCCTGCCCAGTCGACCCCAAAGGAACACTGACATCAATTTTACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp GATGGATGTGCTGGTTGCTGGCTCCAGTTGCGCATGACAGGCAAATGCAGCCAATGCCGACTTAGTAGTTaGTTTTCCGAGAAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: DGCAGCWLQLRMTGKCSQCRLSS*FSEKRE
Trigger: CTCTCTTTTCTCGGAAAACAAACTACTAAGTCGGCA...TTGGCTGCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACCAGCACATCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp GTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTTCACCAAGGAAGACTaGATGTCAGCTAAATCGCCT +
Preference number: 5 (lower is better)
Translates to: VETVWVFNKLPSPEEVLGFTKED*MSAKSP
Trigger: AGGCGATTTAGCTGACATCAAGTCTTCCTTGGTGAA...CCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000438313.6
CDS-3UTR CAA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTTTCACCAAGGAAGACTaGATGTCAGCTAAATCGCCT +
Preference number: 5 (lower is better)
Translates to: SRERACHLLPRIWLIAALFTKED*MSAKSP
Trigger: AGGCGATTTAGCTGACATCAAGTCTTCCTTGGTGAA...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp AGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCGGTCGTTATTCATATTaGGCATCATTATGTACCCGG +
Preference number: 5 (lower is better)
Translates to: SLGFQQASISRRGPGVAAGRYSY*ASLCTR
Trigger: CCGGGTACATAATGATGCCAAATATGAATAACGACC...GGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp GGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCATGCCTTGTTTGGAGTaGACATCTGATGGGATGTGT +
Preference number: 5 (lower is better)
Translates to: GDSLGFQQASISRRGPGVMPCLE*TSDGMC
Trigger: ACACATCCCATCAGATGTCAACTCCAAACAAGGCAT...GACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTCTGGACATGCCTTGTTaGGAGTTGACATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVLDMPC*ELTSDG
Trigger: CCCATCAGATGTCAACTCCAAACAAGGCATGTCCAG...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CAA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATGATGAGGGATGCCAGTaGTGTGGGGACCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHDEGCQ*CGDQED
Trigger: GTCCTCCTGGTCCCCACACAACTGGCATCCCTCATC...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS CCA 90 bp CTAATTTCCATGAATGGAAAGTGGAGGAACATGTGTTCAAATGCCTaGCTGAAGGGTGCAGCAAGGTTCTTACCAGCCAAGAGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: LISMNGKWRNMCSNA*LKGAARFLPAKRWG
Trigger: ACCCCACCTCTTGGCTGGTAAGAACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCATTCATGGAAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CAA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATCTGAGAGGTTTGTGCTaGTCTGGCCACCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHLRGLC*SGHLVS
Trigger: GGACACGAGGTGGCCAGACAAGCACAAACCTCTCAG...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCGGGCTCCTGAGAGGTTaGTGCTTGTCTGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGGLLRG*CLSGHL
Trigger: GAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCC...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTGGGCTCCTGAGAGGTTaGTGCTTGTCTGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKAGLLRG*CLSGHL
Trigger: GAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCC...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp GCGCATGACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTGGTCGTTATTCATATTaGGCATCATTATGTACCCGG +
Preference number: 5 (lower is better)
Translates to: AHDRQMQPSYRPCRKVTGGRYSY*ASLCTR
Trigger: CCGGGTACATAATGATGCCAAATATGAATAACGACC...ACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGTCATGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp GGGGTCGCTGCCTTGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATGTGAGAAAGAGATCCATTaGACATGTATGGGTCGTTAT +
Preference number: 5 (lower is better)
Translates to: GVAALALHVGNELRFPPCEKEIH*TCMGRY
Trigger: ATAACGACCCATACATGTCAAATGGATCTCTTTCTC...ACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp GGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGGAGAAAGAGATCCATTaGACATGTATGGGTCGTTAT +
Preference number: 5 (lower is better)
Translates to: GRPWRQSGFSTSFHLQKREKEIH*TCMGRY
Trigger: ATAACGACCCATACATGTCAAATGGATCTCTTTCTC...CCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp TCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGTTGATAGCTGCACTTTACCATAATTGTCTCTaGCAGACCAGCCTGGATAAA +
Preference number: 5 (lower is better)
Translates to: SRERACHLLPRIWLIAALYHNCL*QTSLDK
Trigger: TTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTA...AAGTGCAGCTATCAACCAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp ACTGGGCAGGCCGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAATACCATAATTGTCTCTaGCAGACCAGCCTGGATAAA +
Preference number: 5 (lower is better)
Translates to: TGQAVETVWVFNKLPSPEYHNCL*QTSLDK
Trigger: TTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTA...TTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACGGCCTGCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp CTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTGTTAGGATGACAGTTTaGGGCAAAGGCTGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: LAVDERGVGSDCLYGSASVRMTV*GKGCAL
Trigger: CAAGGCACAGCCTTTGCCCAAAACTGTCATCCTAAC...AGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS TCA 90 bp TCAGGTGTGGAGCTTCCCATTTTGCTTCCTTCCCATTGCAGGCTATaGGATTCTTTCCCATTCATGGCTGCCCTAGTATTACAGACCTTC +
Preference number: 5 (lower is better)
Translates to: SGVELPILLPSHCRL*DSFPFMAALVLQTF
Trigger: GAAGGTCTGTAATACTAGGGCAGCCATGAATGGGAAAGAATCTCATAGCCTGCAATGGGAAGGAAGCAAAATGGGAAGCTCCACACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505297.5
CDS-3UTR CAA 90 bp GCTCCTGCTCCTTTCTCTGTTCATGCTGAGGCTTCACGTGCATTAGGTCACTGTGGTCGTTATTCATATTaGGCATCATTATGTACCCGG +
Preference number: 5 (lower is better)
Translates to: APAPFSVHAEASRALGHCGRYSY*ASLCTR
Trigger: CCGGGTACATAATGATGCCAAATATGAATAACGACC...ACAGTGACCTAATGCACGTGAAGCCTCAGCATGAACAGAGAAAGGAGCAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CAA 90 bp CGTGGAGACAGTCTGGGTTTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGAGAAAGAGATCCATTaGACATGTATGGGTCGTTAT +
Preference number: 5 (lower is better)
Translates to: RGDSLGFQQASISRRGPGEKEIH*TCMGRY
Trigger: ATAACGACCCATACATGTCAAATGGATCTCTTTCTC...CCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAAACCCAGACTGTCTCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000510624.5
CDS-3UTR CAA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTATGCCTTGTTTGGAGTaGACATCTGATGGGATGTGT +
Preference number: 5 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVMPCLE*TSDGMC
Trigger: ACACATCCCATCAGATGTCAACTCCAAACAAGGCAT...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CAA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATCGAAAGGTTACAGGTTaGGATGCAAGATGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ALFWNLALAVDERGVGSDRKVTG*DARCSG
Trigger: CCCAGAGCATCTTGCATCCAAACCTGTAACCTTTCG...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp AGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGTCTCTAGCAGTGACCTCAGGTCGTTATTCATATTaGGCATCATTATGTACCCGG +
Preference number: 5 (lower is better)
Translates to: RGVGSDCLYGSASLAVTSGRYSY*ASLCTR
Trigger: CCGGGTACATAATGATGCCAAATATGAATAACGACC...TGAGGTCACTGCTAGAGACGCTGATCCATAAAGACAATCACTGCCAACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTGGTCGTTATTCATATTaGGCATCATTATGTACCCGG +
Preference number: 5 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVGRYSY*ASLCTR
Trigger: CCGGGTACATAATGATGCCAAATATGAATAACGACC...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CAA 90 bp TTTGACCTGAGGTGTTACAATAGCTGGATGAGGGATGCCAGTTGTGTGGGGACCGAGAAAGAGATCCATTaGACATGTATGGGTCGTTAT +
Preference number: 5 (lower is better)
Translates to: FDLRCYNSWMRDASCVGTEKEIH*TCMGRY
Trigger: ATAACGACCCATACATGTCAAATGGATCTCTTTCTC...GGTCCCCACACAACTGGCATCCCTCATCCAGCTATTGTAACACCTCAGGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504950.5
CDS-3UTR CAA 90 bp ATATTTAGCCTGCTCTTCACGGGAGAGGGCATGCCACCTTCTGCCAAGAATCTGGAGAAAGAGATCCATTaGACATGTATGGGTCGTTAT +
Preference number: 5 (lower is better)
Translates to: IFSLLFTGEGMPPSAKNLEKEIH*TCMGRY
Trigger: ATAACGACCCATACATGTCAAATGGATCTCTTTCTC...CAGATTCTTGGCAGAAGGTGGCATGCCCTCTCCCGTGAAGAGCAGGCTAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp ACAGGCAAATGCAGCCAAGTTACCGTCCTTGCCGAAAGGTTACAGGTTTGGATGTACCATAATTGTCTCTaGCAGACCAGCCTGGATAAA +
Preference number: 5 (lower is better)
Translates to: TGKCSQVTVLAERLQVWMYHNCL*QTSLDK
Trigger: TTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTA...CATCCAAACCTGTAACCTTTCGGCAAGGACGGTAACTTGGCTGCATTTGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp GCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATTGTCTTTATGGATCAGCGGCTTTATTTTGGAACTaGGCTCTTGCAGTAGACGAA +
Preference number: 5 (lower is better)
Translates to: ALAVDERGVGSDCLYGSAALFWN*ALAVDE
Trigger: TTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC...CGCTGATCCATAAAGACAATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp TTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTGTTCCGAAAGGTTACAGGTTaGGATGCAAGATGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LWISVSSSDLRVKLMSVFRKVTG*DARCSG
Trigger: CCCAGAGCATCTTGCATCCAAACCTGTAACCTTTCG...GAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp TTGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACGGTTGCTGGCTCCAGTaGCGCATGACAGGCAAATGC +
Preference number: 5 (lower is better)
Translates to: LLPTEWVWLLHLFSSTEHGCWLQ*RMTGKC
Trigger: GCATTTGCCTGTCATGCGCAACTGGAGCCAGCAACC...GTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp TGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTGAAGGGTGCAGCAAGGTTGAGAAAGAGATCCATTaGACATGTATGGGTCGTTAT +
Preference number: 5 (lower is better)
Translates to: WKVEEHVFKCLAEGCSKVEKEIH*TCMGRY
Trigger: ATAACGACCCATACATGTCAAATGGATCTCTTTCTC...AACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS-3UTR CAA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATATGCCTTGTTTGGAGTaGACATCTGATGGGATGTGT +
Preference number: 5 (lower is better)
Translates to: ALFWNLALAVDERGVGSDMPCLE*TSDGMC
Trigger: ACACATCCCATCAGATGTCAACTCCAAACAAGGCAT...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp TCCTCTTCTTTTTCTTACCATAATTGTCTCTTGCAGACCAGCCTGGATAAAGCTAGGCAGCTGTCATTCTaGGACCTGTACCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: SSSFSYHNCLLQTSLDKARQLSF*DLYLMQ
Trigger: CTGCATCAGGTACAGGTCCAAGAATGACAGCTGCCT...AGCTTTATCCAGGCTGGTCTGCAAGAGACAATTATGGTAAGAAAAAGAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATGACCTCAGGGTAAAATaGATGTCAGTGTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: ALFWNLALAVDERGVGSDDLRVK*MSVFLW
Trigger: CCAAAGGAACACTGACATCAATTTTACCCTGAGGTC...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp TTATGGATCAGCGTCTCTAGCAGTGACCTCAGGGTAAAATTGATGTCAGTGTTCATGCCTTGTTTGGAGTaGACATCTGATGGGATGTGT +
Preference number: 5 (lower is better)
Translates to: LWISVSSSDLRVKLMSVFMPCLE*TSDGMC
Trigger: ACACATCCCATCAGATGTCAACTCCAAACAAGGCAT...GAACACTGACATCAATTTTACCCTGAGGTCACTGCTAGAGACGCTGATCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp TTATGCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGGGTCGTTATTCATATTaGGCATCATTATGTACCCGG +
Preference number: 5 (lower is better)
Translates to: LCFILELGSCSRRKRGWQGRYSY*ASLCTR
Trigger: CCGGGTACATAATGATGCCAAATATGAATAACGACC...CTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp GCTTTATTTTGGAACTTGGCTCTTGCAGTAGACGAAAGAGGGGTTGGCAGTGATGAGAAAGAGATCCATTaGACATGTATGGGTCGTTAT +
Preference number: 5 (lower is better)
Translates to: ALFWNLALAVDERGVGSDEKEIH*TCMGRY
Trigger: ATAACGACCCATACATGTCAAATGGATCTCTTTCTC...ATCACTGCCAACCCCTCTTTCGTCTACTGCAAGAGCCAAGTTCCAAAATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
CDS-3UTR CAA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATATGCCTTGTTTGGAGTaGACATCTGATGGGATGTGT +
Preference number: 5 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHMPCLE*TSDGMC
Trigger: ACACATCCCATCAGATGTCAACTCCAAACAAGGCAT...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS-3UTR CAA 90 bp TTGCTACCAACAGAGTGGGTTTGGCTATTACATTTATTTAGCTCTACTGAACACCTGGACATGCCTTGTTaGGAGTTGACATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: LLPTEWVWLLHLFSSTEHLDMPC*ELTSDG
Trigger: CCCATCAGATGTCAACTCCAAACAAGGCATGTCCAG...GTGTTCAGTAGAGCTAAATAAATGTAATAGCCAAACCCACTCTGTTGGTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp ACATTAACTCAAACTGGAATGACAAACGTTAGGATGACAGTTTTGGGCAAAGGCTTCACCAAGGAAGACTaGATGTCAGCTAAATCGCCT +
Preference number: 5 (lower is better)
Translates to: TLTQTGMTNVRMTVLGKGFTKED*MSAKSP
Trigger: AGGCGATTTAGCTGACATCAAGTCTTCCTTGGTGAA...GCCTTTGCCCAAAACTGTCATCCTAACGTTTGTCATTCCAGTTTGAGTTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS-3UTR CAA 90 bp ACCAGCCTGGATAAAGCTGCATATGTAGCTGTCTTTCTTTCCGTGCTAATTCATGGTCGTTATTCATATTaGGCATCATTATGTACCCGG +
Preference number: 5 (lower is better)
Translates to: TSLDKAAYVAVFLSVLIHGRYSY*ASLCTR
Trigger: CCGGGTACATAATGATGCCAAATATGAATAACGACC...ATGAATTAGCACGGAAAGAAAGACAGCTACATATGCAGCTTTATCCAGGCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506680.5
CDS CCA 72 bp CCGAGCTTGGCCGCGTGCGAGGCTCCGGGCGCGTCCTaGTTCCTCGGCCCGAGAGCGCGCAGCCCGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PSLAACEAPGAS*FLGPRARSPGP
Trigger: GGGACCCGGGCTGCGCGCTCTCGGGCCGAGGAACCAGGACGCGCCCGGAGCCTCGCACGCGGCCAAGCTCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS GCA 72 bp CCGGCGGCCACCCCGCGACCCCGCGTCGCCGGGATTTaGGCGCGGAGAACGCCGGTTCTGGAGGGAGCACGC +
Preference number: 6 (lower is better)
Translates to: PAATPRPRVAGI*ARRTPVLEGAR
Trigger: GCGTGCTCCCTCCAGAACCGGCGTTCTCCGCGCGCAAATCCCGGCGACGCGGGGTCGCGGGGTGGCCGCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS CAA 72 bp CCCGGCGGCCACCCCGCGACCCCGCGTCGCCGGGATTaGCGCGCGGAGAACGCCGGTTCTGGAGGGAGCACG +
Preference number: 6 (lower is better)
Translates to: PGGHPATPRRRD*RAENAGSGGST
Trigger: CGTGCTCCCTCCAGAACCGGCGTTCTCCGCGCGCAAATCCCGGCGACGCGGGGTCGCGGGGTGGCCGCCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS GCA 72 bp GGGAGTCACAGCGGGGGCCTCGGGCCCAAATGCCTCTaGCCGGAGCTCGAGCCGACACACACACTCAGTCCG +
Preference number: 6 (lower is better)
Translates to: GSHSGGLGPKCL*PELEPTHTLSP
Trigger: CGGACTGAGTGTGTGTGTCGGCTCGAGCTCCGGGCAGAGGCATTTGGGCCCGAGGCCCCCGCTGTGACTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS GCA 72 bp GTCTCGGGGAGTCACAGCGGGGGCCTCGGGCCCAAATaGCTCTGCCCGGAGCTCGAGCCGACACACACACTC +
Preference number: 6 (lower is better)
Translates to: VSGSHSGGLGPK*LCPELEPTHTL
Trigger: GAGTGTGTGTGTCGGCTCGAGCTCCGGGCAGAGGCATTTGGGCCCGAGGCCCCCGCTGTGACTCCCCGAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS CCA 72 bp GCGTCGCCGGGATTTGCGCGCGGAGAACGCCGGTTCTaGAGGGAGCACGCCTCCCCAAAGTGCAGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: ASPGFARGERRF*REHASPKCRGG
Trigger: CCCTCCTCTGCACTTTGGGGAGGCGTGCTCCCTCCAGAACCGGCGTTCTCCGCGCGCAAATCCCGGCGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS CAA 90 bp CTGCCCGGAGCTCGAGCCGACACACACACTCAGTCCGACCCCTCTTaGTTCCCGGCTCGAGTTTCTCAGCCTGGCTCGCCGGCTCGCCGC +
Preference number: 6 (lower is better)
Translates to: LPGARADTHTQSDPS*FPARVSQPGSPARR
Trigger: GCGGCGAGCCGGCGAGCCAGGCTGAGAAACTCGAGCCGGGAACAAAGAGGGGTCGGACTGAGTGTGTGTGTCGGCTCGAGCTCCGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS GCA 72 bp TCGAGTTTCTCAGCCTGGCTCGCCGGCTCGCCGCTCTaGACGCCTCCGCCGGCCAGCTCTGTCAAAGCAAAG +
Preference number: 6 (lower is better)
Translates to: SSFSAWLAGSPL*TPPPASSVKAK
Trigger: CTTTGCTTTGACAGAGCTGGCCGGCGGAGGCGTGCAGAGCGGCGAGCCGGCGAGCCAGGCTGAGAAACTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS CCA 72 bp GGGCATCCCGGCGGCTCTGTAATCTCCGCTCCGCTGTaGGAGCACCCGCGCAACAGCAGGAAAGACAGAGGG +
Preference number: 6 (lower is better)
Translates to: GHPGGSVISAPL*EHPRNSRKDRG
Trigger: CCCTCTGTCTTTCCTGCTGTTGCGCGGGTGCTCCCACAGCGGAGCGGAGATTACAGAGCCGCCGGGATGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265165.6
ENST00000379951.6
CDS CCA 72 bp CGGGTATCAGGGTCCATCCGCCCCCTAGACCAGCTCTaGACTAGGCTTCAAACAGCCCTCCAGCGCGGCCCT +
Preference number: 6 (lower is better)
Translates to: RVSGSIRPLDQL*TRLQTALQRGP
Trigger: AGGGCCGCGCTGGAGGGCTGTTTGAAGCCTAGTCCAGAGCTGGTCTAGGGGGCGGATGGACCCTGATACCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510624.5
ENST00000515500.5
CDS GCA 72 bp TCTGGCCTTGTCGTGGTAGGGCTCCTGAGAGGTTTGTaGTTGTCTGGCCACCTCGTGTCCGTTGCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: SGLVVVGLLRGL*LSGHLVSVAGR
Trigger: CCGGCCAGCAACGGACACGAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCCTACCACGACAAGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
ENST00000504775.5
ENST00000506680.5
CDS GCA 72 bp TCTGGCCTTGTCGTGGTAGGGCTCCTGAGAGGTTTGTaGTTGTCTGGCCACCAGCTCTATCGCCCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: SGLVVVGLLRGL*LSGHQLYRPQR
Trigger: CCGCTGCGGGCGATAGAGCTGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCCTACCACGACAAGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505293.1
CDS CAA 72 bp TTCTCTGGCCTTGTCGTGGTAGGGCTCCTGAGAGGTTaGTGCTTGTCTGGCCACCTCGTGTCCGTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: FSGLVVVGLLRG*CLSGHLVSVAG
Trigger: GCCAGCAACGGACACGAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCCTACCACGACAAGGCCAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
ENST00000504775.5
ENST00000506680.5
CDS CCA 72 bp CTGAAGGGTGCAGCAAGGTTCTTACCAGCCAAGAGGTaGGGTGATCTGTCCAACACCACCCGGAGACAAGGG +
Preference number: 6 (lower is better)
Translates to: LKGAARFLPAKR*GDLSNTTRRQG
Trigger: CCCTTGTCTCCGGGTGGTGTTGGACAGATCACCCCACCTCTTGGCTGGTAAGAACCTTGCTGCACCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS TCA 72 bp CGAAGATCTTTTCCTTCTGAGGATCGCCCTCGTCCTTaGAGGGGATCATCTCGTCCGTGGCGCAGAGTTCCG +
Preference number: 6 (lower is better)
Translates to: RRSFPSEDRPRP*RGSSRPWRRVP
Trigger: CGGAACTCTGCGCCACGGACGAGATGATCCCCTTCAAGGACGAGGGCGATCCTCAGAAGGAAAAGATCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
ENST00000506680.5
CDS TCA 72 bp TTTCCTCCAGAGGGTTTCCCAGTTGTGGAACAAGGGTaGCCAGTGGAGTGTCGGGTATCAGGGTCCATCCGC +
Preference number: 6 (lower is better)
Translates to: FPPEGFPVVEQG*PVECRVSGSIR
Trigger: GCGGATGGACCCTGATACCCGACACTCCACTGGTCACCCTTGTTCCACAACTGGGAAACCCTCTGGAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510624.5
ENST00000515500.5
CDS CCA 72 bp CTCCATCTGGATGCTTTCCGTCATCGGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCTCCTGAGAGGTTTGTG +
Preference number: 6 (lower is better)
Translates to: LHLDAFRHRGVL*PCRGRAPERFV
Trigger: CACAAACCTCTCAGGAGCCCTACCACGACAAGGCCAGAGAACACCCCGATGACGGAAAGCATCCAGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
ENST00000504775.5
ENST00000504950.5
ENST00000505293.1
ENST00000506680.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000510717.5
ENST00000512172.1
ENST00000515500.5
CDS GCA 72 bp TCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTCGTTTTCCACCTGATG +
Preference number: 6 (lower is better)
Translates to: SPEEVLGSLPWL*TLGMSFVFHLM
Trigger: CATCAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379951.6
ENST00000505379.5
CDS GCA 72 bp TCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTaGACGTTGGGAATGAGCTTCGTTTTCCACCTCAAG +
Preference number: 6 (lower is better)
Translates to: SPEEVLGSLPWL*TLGMSFVFHLK
Trigger: CTTGAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503879.5
CDS GCA 72 bp TCTGGCCTTGTCGTGGTAGGGCTCCTGAGAGGTTTGTaGTTGTCTGGCCACCTCTGCCATTGGGATAGAGAA +
Preference number: 6 (lower is better)
Translates to: SGLVVVGLLRGL*LSGHLCHWDRE
Trigger: TTCTCTATCCCAATGGCAGAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCCTACCACGACAAGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510624.5
ENST00000512172.1
ENST00000515500.5
CDS CAA 72 bp TTCTCTGGCCTTGTCGTGGTAGGGCTCCTGAGAGGTTaGTGCTTGTCTGGCCACCTCTGCCATTGGGATAGA +
Preference number: 6 (lower is better)
Translates to: FSGLVVVGLLRG*CLSGHLCHWDR
Trigger: TCTATCCCAATGGCAGAGGTGGCCAGACAAGCACAAACCTCTCAGGAGCCCTACCACGACAAGGCCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510624.5
ENST00000512172.1
ENST00000515500.5
CDS CAA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTaGGGAATGAGCTTCGTTTTCCACCATGTTTCAGATGTAGGCAGC +
Preference number: 6 (lower is better)
Translates to: PSPEEVLGSLPWLCT*GMSFVFHHVSDVGS
Trigger: GCTGCCTACATCTGAAACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000504426.5
ENST00000505297.5
ENST00000507470.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000512407.5
ENST00000514444.5
CDS CAA 90 bp CAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTTCGTTTTCCACCTGATGCAGATTCC +
Preference number: 6 (lower is better)
Translates to: QASISRRGPGVAALA*HVGNELRFPPDADS
Trigger: GGAATCTGCATCAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379951.6
ENST00000505379.5
CDS CAA 90 bp GGTGTCAGGACTTTTCTACCGGATTTCCTCCAGAGGGTTTCCCAGTaGTGGAACAAGGGTGACCAGTGGAGTGTCGGGTATCAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: GVRTFLPDFLQRVSQ*WNKGDQWSVGYQGP
Trigger: TGGACCCTGATACCCGACACTCCACTGGTCACCCTTGTTCCACAACTGGGAAACCCTCTGGAGGAAATCCGGTAGAAAAGTCCTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510624.5
ENST00000515500.5
CDS CAA 72 bp GAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTaGGGAATGAGCTTCGTTTTCCACCTGATGCAGATT +
Preference number: 6 (lower is better)
Translates to: EEVLGSLPWLCT*GMSFVFHLMQI
Trigger: AATCTGCATCAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379951.6
ENST00000505379.5
CDS CAA 72 bp ATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTTCGTTTTCCACCTGAT +
Preference number: 6 (lower is better)
Translates to: ISRRGPGVAALA*HVGNELRFPPD
Trigger: ATCAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379951.6
ENST00000505379.5
CDS CAA 72 bp GAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTaGGGAATGAGCTTCGTTTTCCACCTCAAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: EEVLGSLPWLCT*GMSFVFHLKKE
Trigger: TTCCTTCTTGAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503879.5
CDS CAA 72 bp ATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTTCGTTTTCCACCTCAA +
Preference number: 6 (lower is better)
Translates to: ISRRGPGVAALA*HVGNELRFPPQ
Trigger: TTGAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503879.5
CDS CAA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTaGGGAATGAGCTTCGTTTTCCACCTGATGCAGATTCCTGTAGTT +
Preference number: 6 (lower is better)
Translates to: PSPEEVLGSLPWLCT*GMSFVFHLMQIPVV
Trigger: AACTACAGGAATCTGCATCAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379951.6
ENST00000505379.5
CDS CAA 90 bp CAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTTCGTTTTCCACCTCAAGAAGGAACA +
Preference number: 6 (lower is better)
Translates to: QASISRRGPGVAALA*HVGNELRFPPQEGT
Trigger: TGTTCCTTCTTGAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503879.5
CDS CAA 72 bp GAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTaGGGAATGAGCTTCGTTTTCCACCATGTTTCAGAT +
Preference number: 6 (lower is better)
Translates to: EEVLGSLPWLCT*GMSFVFHHVSD
Trigger: ATCTGAAACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000504426.5
ENST00000505297.5
ENST00000507470.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000512407.5
ENST00000514444.5
CDS CAA 90 bp CAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTaGCACGTTGGGAATGAGCTTCGTTTTCCACCATGTTTCAGATGT +
Preference number: 6 (lower is better)
Translates to: QASISRRGPGVAALA*HVGNELRFPPCFRC
Trigger: ACATCTGAAACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000504426.5
ENST00000505297.5
ENST00000507470.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000512407.5
ENST00000514444.5
CDS CAA 90 bp TTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCTGATGCA +
Preference number: 6 (lower is better)
Translates to: FQQASISRRGPGVAA*ALHVGNELRFPPDA
Trigger: TGCATCAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379951.6
ENST00000505379.5
CDS CAA 90 bp TTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCATGTTTC +
Preference number: 6 (lower is better)
Translates to: FQQASISRRGPGVAA*ALHVGNELRFPPCF
Trigger: GAAACATGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000265165.6
ENST00000438313.6
ENST00000504426.5
ENST00000505297.5
ENST00000507470.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000512407.5
ENST00000514444.5
CDS CAA 90 bp CCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTTGGCTTTGCACGTaGGGAATGAGCTTCGTTTTCCACCTCAAGAAGGAACAAATGAAA +
Preference number: 6 (lower is better)
Translates to: PSPEEVLGSLPWLCT*GMSFVFHLKKEQMK
Trigger: TTTCATTTGTTCCTTCTTGAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503879.5
CDS CAA 90 bp TTTCAACAAGCTTCCATCTCCAGAAGAGGTCCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAATGAGCTTCGTTTTCCACCTCAAGAA +
Preference number: 6 (lower is better)
Translates to: FQQASISRRGPGVAA*ALHVGNELRFPPQE
Trigger: TTCTTGAGGTGGAAAACGAAGCTCATTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGACCTCTTCTGGAGATGGAAGCTTGTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503879.5
CDS CAA 90 bp CCCCCAACTCTCAGGTGTGGAGCTTCCCATTTTGCTTCCTTCCCATaGCAGGCTATGAGATTCTTTCCCATTCATGGCTGCCCTGCATAT +
Preference number: 6 (lower is better)
Translates to: PPTLRCGASHFASFP*QAMRFFPIHGCPAY
Trigger: ATATGCAGGGCAGCCATGAATGGGAAAGAATCTCATAGCCTGCAATGGGAAGGAAGCAAAATGGGAAGCTCCACACCTGAGAGTTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512407.5
CDS CAA 72 bp ACTTTTCTACCGGATTTCCTCCAGAGGGTTTCCCAGTaGTGGAACAAGGGTGACCAGTGGAGTGTCGGGTAT +
Preference number: 6 (lower is better)
Translates to: TFLPDFLQRVSQ*WNKGDQWSVGY
Trigger: ATACCCGACACTCCACTGGTCACCCTTGTTCCACAACTGGGAAACCCTCTGGAGGAAATCCGGTAGAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510624.5
ENST00000515500.5
CDS CAA 90 bp CCCCCAACTCTCAGGTGTGGAGCTTCCCATTTTGCTTCCTTCCCATaGCAGGCTATGAGATTCTTTCCCATTCATGGCTGCCCTAGTATT +
Preference number: 6 (lower is better)
Translates to: PPTLRCGASHFASFP*QAMRFFPIHGCPSI
Trigger: AATACTAGGGCAGCCATGAATGGGAAAGAATCTCATAGCCTGCAATGGGAAGGAAGCAAAATGGGAAGCTCCACACCTGAGAGTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505297.5
CDS TCA 72 bp ACACATTTCCTTCTTGAACGCAAAAGAGCGAATGAGTaGGAGTGGAGAGCCACTGGTATGGAGGAGGGGCTT +
Preference number: 6 (lower is better)
Translates to: THFLLERKRANE*EWRATGMEEGL
Trigger: AAGCCCCTCCTCCATACCAGTGGCTCTCCACTCTCACTCATTCGCTCTTTTGCGTTCAAGAAGGAAATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505328.1
CDS TCA 72 bp ATGGAAAGTGGAGGAACATGTGTTCAAATGCCTGGCTaGAGGGTGCAGCAAGGTTCTTACCAGCCAAGAGGT +
Preference number: 6 (lower is better)
Translates to: MESGGTCVQMPG*RVQQGSYQPRG
Trigger: ACCTCTTGGCTGGTAAGAACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS CCA 72 bp AAAGAGCGAATGAGTGAGAGTGGAGAGCCACTGGTATaGAGGAGGGGCTTACATAATTGTCTCTTGCAGACC +
Preference number: 6 (lower is better)
Translates to: KERMSESGEPLV*RRGLHNCLLQT
Trigger: GGTCTGCAAGAGACAATTATGTAAGCCCCTCCTCCATACCAGTGGCTCTCCACTCTCACTCATTCGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505328.1
CDS CAA 72 bp CTCAGGTGTGGAGCTTCCCATTTTGCTTCCTTCCCATaGCAGGCTATGAGATTCTTTCCCATTCATGGCTGC +
Preference number: 6 (lower is better)
Translates to: LRCGASHFASFP*QAMRFFPIHGC
Trigger: GCAGCCATGAATGGGAAAGAATCTCATAGCCTGCAATGGGAAGGAAGCAAAATGGGAAGCTCCACACCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505297.5
ENST00000512407.5
CDS CCA 72 bp ATGAATGGAAAGTGGAGGAACATGTGTTCAAATGCCTaGCTGAAGGGTGCAGCAAGGTTCTTACCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: MNGKWRNMCSNA*LKGAARFLPAK
Trigger: CTTGGCTGGTAAGAACCTTGCTGCACCCTTCAGCCAGGCATTTGAACACATGTTCCTCCACTTTCCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512172.1
CDS CCA 72 bp GTATATCCTCCAAGTTTCTTTGGAGGGAAAAGGCGTTaGTTAAATCATTCGGGTGTCAGGACTTTTCTACCG +
Preference number: 6 (lower is better)
Translates to: VYPPSFFGGKRR*LNHSGVRTFLP
Trigger: CGGTAGAAAAGTCCTGACACCCGAATGATTTAACCAACGCCTTTTCCCTCCAAAGAAACTTGGAGGATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510624.5
ENST00000515500.5
CDS CAA 72 bp GGTATATCCTCCAAGTTTCTTTGGAGGGAAAAGGCGTaGGTTAAATCATTCGGGTGTCAGGACTTTTCTACC +
Preference number: 6 (lower is better)
Translates to: GISSKFLWREKA*VKSFGCQDFST
Trigger: GGTAGAAAAGTCCTGACACCCGAATGATTTAACCAACGCCTTTTCCCTCCAAAGAAACTTGGAGGATATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510624.5
ENST00000515500.5
CDS CAA 90 bp GTGGAGAAAGAGATCCATTTGACATGTATGGGTCGTTATTCATATTaGGCATCATTATGTACCCGGAATAACTCGAGTAGGAGGGTCCCT +
Preference number: 6 (lower is better)
Translates to: VEKEIHLTCMGRYSY*ASLCTRNNSSRRVP
Trigger: AGGGACCCTCCTACTCGAGTTATTCCGGGTACATAATGATGCCAAATATGAATAACGACCCATACATGTCAAATGGATCTCTTTCTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
ENST00000504775.5
ENST00000504950.5
ENST00000505293.1
ENST00000506680.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000510717.5
ENST00000512172.1
ENST00000515500.5
CDS CAA 72 bp TTGATGTTCTCGGGATGGGTGGAGAAAGAGATCCATTaGACATGTATGGGTCGTTATTCATATTTGGCATCA +
Preference number: 6 (lower is better)
Translates to: LMFSGWVEKEIH*TCMGRYSYLAS
Trigger: TGATGCCAAATATGAATAACGACCCATACATGTCAAATGGATCTCTTTCTCCACCCATCCCGAGAACATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
ENST00000504775.5
ENST00000505293.1
ENST00000506680.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000510717.5
ENST00000512172.1
ENST00000515500.5
CDS CAA 90 bp GCACTTTATTTGATGTTCTCGGGATGGGTGGAGAAAGAGATCCATTaGACATGTATGGGTCGTTATTCATATTTGGCATCATTATGTACC +
Preference number: 6 (lower is better)
Translates to: ALYLMFSGWVEKEIH*TCMGRYSYLASLCT
Trigger: GGTACATAATGATGCCAAATATGAATAACGACCCATACATGTCAAATGGATCTCTTTCTCCACCCATCCCGAGAACATCAAATAAAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
ENST00000504775.5
ENST00000505293.1
ENST00000506680.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000510717.5
ENST00000512172.1
ENST00000515500.5
CDS CAA 72 bp GAGATCCATTTGACATGTATGGGTCGTTATTCATATTaGGCATCATTATGTACCCGGAATAACTCGAGTAGG +
Preference number: 6 (lower is better)
Translates to: EIHLTCMGRYSY*ASLCTRNNSSR
Trigger: CCTACTCGAGTTATTCCGGGTACATAATGATGCCAAATATGAATAACGACCCATACATGTCAAATGGATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265165.6
ENST00000379951.6
ENST00000438313.6
ENST00000504775.5
ENST00000504950.5
ENST00000505293.1
ENST00000506680.5
ENST00000509428.5
ENST00000510135.5
ENST00000510624.5
ENST00000510717.5
ENST00000512172.1
ENST00000515500.5
CDS CAA 72 bp TACCAGCATTATATACACCTAAAACACATTTCCTTCTaGAACGCAAAAGAGCGAATGAGTGAGAGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: YQHYIHLKHISF*NAKERMSESGE
Trigger: CTCTCCACTCTCACTCATTCGCTCTTTTGCGTTCAAGAAGGAAATGTGTTTTAGGTGTATATAATGCTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505328.1