Pregenerated sensors for LEAP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000164406Ensembl transcript IDs: ENST00000296877.3, ENST00000483190.1, ENST00000485457.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCCAAGCTTGACCACCTTTGACACCTCCCTGAAGAGTATGGAGTaGAGGGATCCAGGGCCACAGCTTAGGAACTTGCTGAAGTTGATT | + |
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Preference number: 1 (lower is better) Translates to: LPSLTTFDTSLKSME*RDPGPQLRNLLKLI Trigger: AATCAACTTCAGCAAGTTCCTAAGCTGTGGCCCTGGATCCCTTCACTCCATACTCTTCAGGGAGGTGTCAAAGGTGGTCAAGCTTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| 3UTR TCA 72 bp | TTGACCACCTTTGACACCTCCCTGAAGAGTATGGAGTaGAGGGATCCAGGGCCACAGCTTAGGAACTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LTTFDTSLKSME*RDPGPQLRNLL Trigger: CAGCAAGTTCCTAAGCTGTGGCCCTGGATCCCTTCACTCCATACTCTTCAGGGAGGTGTCAAAGGTGGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| 3UTR-3UTR CAA 90 bp | GTTGATTACGTAGCTATTGATTATGTAGCTCTCACTACACTTTCCAGATTGAGAATTAAAAATACAAGATaGCTTCACTTGGGTGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: VDYVAIDYVALTTLSRLRIKNTR*LHLGVS Trigger: GGAGACACCCAAGTGAAGCAATCTTGTATTTTTAAT...TCTCAATCTGGAAAGTGTAGTGAGAGCTACATAATCAATAGCTACGTAATCAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR GCA 90 bp | AATCAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTGCTGTCCTTTCTTTTCACCCAGGCTGGGGTaGAGTGGCATGATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NQYSIERSIVGGDCCPFFSPRLG*SGMILA Trigger: AGCCAAGATCATGCCACTGCACCCCAGCCTGGGTGA...AAAGAAAGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CCA 90 bp | AATCAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTGCTGTCCTTTCTTTGGGGAGCCATCTATCTaGCCCAACAGCAACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: NQYSIERSIVGGDCCPFFGEPSI*PNSNRK Trigger: CTTCCTGTTGCTGTTGGGCCAGATAGATGGCTCCCC...AAAGAAAGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CCA 90 bp | AATCAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTGCTGTCCTTTCTTTTGGGGTCATTCTCCGTaGCCTTCTCTTTGCCGAACT | + |
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Preference number: 4 (lower is better) Translates to: NQYSIERSIVGGDCCPFFWGHSP*PSLCRT Trigger: AGTTCGGCAAAGAGAAGGCCACGGAGAATGACCCCA...AAAGAAAGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR TCA 90 bp | ATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAATATTTCAGCCTCCCAAGCTTaGCCACCTTTGACACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: IQDCFTWVSPAKMQLINISASQA*PPLTPP Trigger: GGGAGGTGTCAAAGGTGGTCAAGCTTGGGAGGCTGA...AATATTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR GCA 90 bp | GCAGTTAATCAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTGCTGTCCTGAAGATCATGAGGACTaGACAAAGTTTGAGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: AVNQYSIERSIVGGDCCPEDHED*TKFEVP Trigger: TGGCACCTCAAACTTTGTGCAGTCCTCATGATCTTC...AGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTGATTAACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR GCA 90 bp | AATCAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTGCTGTCCTTTCTTTCCGTGGCCTTCTCTTTaGCGAACTCACTTCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: NQYSIERSIVGGDCCPFFPWPSL*RTHFWY Trigger: ATACCAGAAGTGAGTTCGGCAAAGAGAAGGCCACGG...AAAGAAAGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CCA 90 bp | AATCAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTGCTGTCCTTTCTTTACTCACTTCTGGTATTaGGGAGCCATCTATCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: NQYSIERSIVGGDCCPFFTHFWY*GAIYLA Trigger: GGCCAGATAGATGGCTCCCCAATACCAGAAGTGAGT...AAAGAAAGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR TCA 90 bp | AAAAATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAACTGAAGAGTATGGAGTaGAGGGATCCAGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: KNTRLLHLGVSSQNAVNQLKSME*RDPGPQ Trigger: CTGTGGCCCTGGATCCCTTCACTCCATACTCTTCAG...TTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR TCA 90 bp | ATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAATATTGAGCATTGTCGGAGGTaGCTGCTGTCCTTTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: IQDCFTWVSPAKMQLINIEHCRR*LLSFLS Trigger: GGAAAGAAAGGACAGCAGTCACCTCCGACAATGCTC...AATATTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR TCA 90 bp | TTAAAAATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCCCTTTGACACCTCCCTaGAGAGTATGGAGTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LKIQDCFTWVSPAKMQLIPLTPP*RVWSEG Trigger: CCCTTCACTCCATACTCTTCAGGGAGGTGTCAAAGG...GATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTATTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR GCA 90 bp | AAAAATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAAGCACAAAGTTTGAGGTaGCACATCTTGACAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KNTRLLHLGVSSQNAVNQAQSLR*HILTGG Trigger: TCCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGC...TTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR GCA 90 bp | ATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAATATTATTGTCGGAGGTGACTaGTGTCCTTTCTTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: IQDCFTWVSPAKMQLINIIVGGD*CPFFPW Trigger: CCAGGGAAAGAAAGGACAGCAGTCACCTCCGACAAT...AATATTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR TCA 90 bp | ATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAATATTAAGCTTGACCACCTTTaGCACCTCCCTGAAGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: IQDCFTWVSPAKMQLINIKLDHL*HLPEEY Trigger: ATACTCTTCAGGGAGGTGTCAAAGGTGGTCAAGCTT...AATATTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CCA 90 bp | GTTGATTACGTAGCTATTGATTATGTAGCTCTCACTACACTTTCCAGATTGAGATGCCGAACTCACTTCTaGTATTGGGGAGCCATCTAT | + |
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Preference number: 4 (lower is better) Translates to: VDYVAIDYVALTTLSRLRCRTHF*YWGAIY Trigger: ATAGATGGCTCCCCAATACCAGAAGTGAGTTCGGCA...TCTCAATCTGGAAAGTGTAGTGAGAGCTACATAATCAATAGCTACGTAATCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR TCA 90 bp | TTAAAAATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCTTCTGCATAGCCTTGTaGTACACTCAGAATCATCCC | + |
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Preference number: 4 (lower is better) Translates to: LKIQDCFTWVSPAKMQLIFCIAL*YTQNHP Trigger: GGGATGATTCTGAGTGTATCACAAGGCTATGCAGAA...GATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTATTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS GCA 90 bp | CCCAACAGCAACAGGAAGATCATGAGGACTGCACAAAGTTTGAGGTaGCACATCTTGACAGGGGGAGGATGTTGGAGCCTGAAAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PNSNRKIMRTAQSLR*HILTGGGCWSLKAR Trigger: CCTGGCTTTCAGGCTCCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCTCATGATCTTCCTGTTGCTGTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS GCA 90 bp | TTCCCTCCTTACCTGGCCCAACAGCAACAGGAAGATCATGAGGACTaGACAAAGTTTGAGGTGCCACATCTTGACAGGGGGAGGATGTTG | + |
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Preference number: 5 (lower is better) Translates to: FPPYLAQQQQEDHED*TKFEVPHLDRGRML Trigger: CAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCTCATGATCTTCCTGTTGCTGTTGGGCCAGGTAAGGAGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS TCA 90 bp | GGAGGAATGTGCTCAAGGGCCACCTTTCAGGCACGTTGTATTTACTaGTCCCTCATCTGGACTTTGAGTGATTGTGTTGCTGGCATGGAC | + |
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Preference number: 5 (lower is better) Translates to: GGMCSRATFQARCIY*SLIWTLSDCVAGMD Trigger: GTCCATGCCAGCAACACAATCACTCAAAGTCCAGATGAGGGATCAGTAAATACAACGTGCCTGAAAGGTGGCCCTTGAGCACATTCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS GCA 90 bp | CACCCTGCTGCACACCTTGGAAGAGTGATCATTCCATTCCGCAGATaGTGTAGACTCAGAACAGAGGAACCATTCCTCAGGACTGAATCT | + |
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Preference number: 5 (lower is better) Translates to: HPAAHLGRVIIPFRR*CRLRTEEPFLRTES Trigger: AGATTCAGTCCTGAGGAATGGTTCCTCTGTTCTGAGTCTACAGCATCTGCGGAATGGAATGATCACTCTTCCAAGGTGTGCAGCAGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS CCA 90 bp | GGAGGTGACTGCTGTCCTTTCTTTCCCTGGTATGTACATCATTCCTaGGCCACACTTAAGGAACAGCGTCTTTTTCTGCATAGCCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: GGDCCPFFPWYVHHS*ATLKEQRLFLHSLV Trigger: CACAAGGCTATGCAGAAAAAGACGCTGTTCCTTAAGTGTGGCCCAGGAATGATGTACATACCAGGGAAAGAAAGGACAGCAGTCACCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000483190.1 |
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| CDS CCA 90 bp | ATAGAACGGAGCATTGTCGGAGGTGACTGCTGTCCTTTCTTTCCCTaGTATGTACATCATTCCTGGGCCACACTTAAGGAACAGCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: IERSIVGGDCCPFFP*YVHHSWATLKEQRL Trigger: AAGACGCTGTTCCTTAAGTGTGGCCCAGGAATGATGTACATACCAGGGAAAGAAAGGACAGCAGTCACCTCCGACAATGCTCCGTTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000483190.1 |
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| CDS TCA 90 bp | TTGGAGCCTGAAAGCCAGGGACAGTTCCTACTTCCTTTTATAGACTaGCATCAACTCTTGCATTGTTACTGGGTGAGATGGGGGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: LEPESQGQFLLPFID*HQLLHCYWVRWGQS Trigger: ACTTTGCCCCCATCTCACCCAGTAACAATGCAAGAGTTGATGTCAGTCTATAAAAGGAAGTAGGAACTGTCCCTGGCTTTCAGGCTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS GCA 90 bp | GCAGTTAATCAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTaGTGTCCTTTCTTTCCCTGGTATGTACATCATTCCTGGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: AVNQYSIERSIVGGD*CPFFPWYVHHSWAT Trigger: TGTGGCCCAGGAATGATGTACATACCAGGGAAAGAAAGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTGATTAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000483190.1 |
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| CDS-3UTR CAA 90 bp | ATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAATATTCTCAGCCTCCCAAGCTaGACCACCTTTGACACCTCC | + |
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Preference number: 5 (lower is better) Translates to: IQDCFTWVSPAKMQLINILSLPS*TTFDTS Trigger: GGAGGTGTCAAAGGTGGTCAAGCTTGGGAGGCTGAG...AATATTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CAA 90 bp | ATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAATATTTTGAGGTGCCACATCTaGACAGGGGGAGGATGTTGG | + |
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Preference number: 5 (lower is better) Translates to: IQDCFTWVSPAKMQLINILRCHI*TGGGCW Trigger: CCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAA...AATATTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CAA 90 bp | AATCAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTGCTGTCCTTTCTTTAGGACTGCACAAAGTTaGAGGTGCCACATCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: NQYSIERSIVGGDCCPFFRTAQS*RCHILT Trigger: TGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCT...AAAGAAAGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CAA 90 bp | AAAAATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAATCCGTGGCCTTCTCTTaGCCGAACTCACTTCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: KNTRLLHLGVSSQNAVNQSVAFS*PNSLLV Trigger: TACCAGAAGTGAGTTCGGCAAAGAGAAGGCCACGGA...TTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CAA 90 bp | ATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAATATTAACTCACTTCTGGTATaGGGGAGCCATCTATCTGGC | + |
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Preference number: 5 (lower is better) Translates to: IQDCFTWVSPAKMQLININSLLV*GSHLSG Trigger: GCCAGATAGATGGCTCCCCAATACCAGAAGTGAGTT...AATATTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CAA 90 bp | GCAGTTAATCAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTGCTGTCCTATTAAAAATACAAGATaGCTTCACTTGGGTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: AVNQYSIERSIVGGDCCPIKNTR*LHLGVS Trigger: GGAGACACCCAAGTGAAGCAATCTTGTATTTTTAAT...AGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTGATTAACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS-3UTR CAA 90 bp | ATACAAGATTGCTTCACTTGGGTGTCTCCAGCCAAAATGCAGTTAATCAATATTACAAGATTGCTTCACTaGGGTGTCTCCAGCCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: IQDCFTWVSPAKMQLINITRLLH*GVSSQN Trigger: ATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGT...AATATTGATTAACTGCATTTTGGCTGGAGACACCCAAGTGAAGCAATCTTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296877.3 |
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| CDS CCA 72 bp | CCGTGGCCTTCTCTTTGCCGAACTCACTTCTGGTATTaGGGAGCCATCTATCTGGCCCAACAGCAACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PWPSLCRTHFWY*GAIYLAQQQQE Trigger: TTCCTGTTGCTGTTGGGCCAGATAGATGGCTCCCCAATACCAGAAGTGAGTTCGGCAAAGAGAAGGCCACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000485457.1 |
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| CDS CAA 72 bp | TCCGTGGCCTTCTCTTTGCCGAACTCACTTCTGGTATaGGGGAGCCATCTATCTGGCCCAACAGCAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SVAFSLPNSLLV*GSHLSGPTATG Trigger: TCCTGTTGCTGTTGGGCCAGATAGATGGCTCCCCAATACCAGAAGTGAGTTCGGCAAAGAGAAGGCCACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000485457.1 |
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| CDS GCA 72 bp | TACCTGGCCCAACAGCAACAGGAAGATCATGAGGACTaGACAAAGTTTGAGGTGCCACATCTTGACAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: YLAQQQQEDHED*TKFEVPHLDRG Trigger: CCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCTCATGATCTTCCTGTTGCTGTTGGGCCAGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS CCA 72 bp | CATTCTCCGTGGCCTTCTCTTTGCCGAACTCACTTCTaGTATTGGGGAGCCATCTATCTGGCCCAACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: HSPWPSLCRTHF*YWGAIYLAQQQ Trigger: TTGCTGTTGGGCCAGATAGATGGCTCCCCAATACCAGAAGTGAGTTCGGCAAAGAGAAGGCCACGGAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000485457.1 |
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| CDS CCA 72 bp | AGTTTGAGGTGCCACATCTTGACAGGGGGAGGATGTTaGAGCCTGAAAGCCAGGGACAGTTCCTACTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SLRCHILTGGGC*SLKARDSSYFL Trigger: AAGGAAGTAGGAACTGTCCCTGGCTTTCAGGCTCCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS CAA 72 bp | AAGTTTGAGGTGCCACATCTTGACAGGGGGAGGATGTaGGAGCCTGAAAGCCAGGGACAGTTCCTACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: KFEVPHLDRGRM*EPESQGQFLLP Trigger: AGGAAGTAGGAACTGTCCCTGGCTTTCAGGCTCCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS CAA 72 bp | ATCATGAGGACTGCACAAAGTTTGAGGTGCCACATCTaGACAGGGGGAGGATGTTGGAGCCTGAAAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IMRTAQSLRCHI*TGGGCWSLKAR Trigger: CCTGGCTTTCAGGCTCCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCTCATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS CAA 90 bp | AACAGGAAGATCATGAGGACTGCACAAAGTTTGAGGTGCCACATCTaGACAGGGGGAGGATGTTGGAGCCTGAAAGCCAGGGACAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: NRKIMRTAQSLRCHI*TGGGCWSLKARDSS Trigger: GGAACTGTCCCTGGCTTTCAGGCTCCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCTCATGATCTTCCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS CAA 90 bp | ACCTGGCCCAACAGCAACAGGAAGATCATGAGGACTGCACAAAGTTaGAGGTGCCACATCTTGACAGGGGGAGGATGTTGGAGCCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: TWPNSNRKIMRTAQS*RCHILTGGGCWSLK Trigger: TTTCAGGCTCCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCTCATGATCTTCCTGTTGCTGTTGGGCCAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS GCA 72 bp | TATCTGGCCCAACAGCAACAGGAAGATCATGAGGACTaGACAAAGTTTGAGGTGCCACATCTTGACAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: YLAQQQQEDHED*TKFEVPHLDRG Trigger: CCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCTCATGATCTTCCTGTTGCTGTTGGGCCAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000485457.1 |
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| CDS GCA 72 bp | AACAGGAAGATCATGAGGACTGCACAAAGTTTGAGGTaGCACATCTTGACAGGGGGAGGATGTTGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: NRKIMRTAQSLR*HILTGGGCWSL Trigger: CAGGCTCCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCTCATGATCTTCCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000483190.1 ENST00000485457.1 |
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| CDS CAA 90 bp | GACTGCACAAAGTTTGAGGTGCCACATCTTGACAGGGGGAGGATGTaGGAGCCTGAAAGCCAGGGACAGTTCCTACTTCCTTTTATAGAC | + |
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Preference number: 6 (lower is better) Translates to: DCTKFEVPHLDRGRM*EPESQGQFLLPFID Trigger: GTCTATAAAAGGAAGTAGGAACTGTCCCTGGCTTTCAGGCTCCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS TCA 72 bp | AGGCACGTTGTATTTACTGATCCCTCATCTGGACTTTaGGTGATTGTGTTGCTGGCATGGACCCTTTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RHVVFTDPSSGL*VIVLLAWTLSP Trigger: GGGCGAAAGGGTCCATGCCAGCAACACAATCACTCAAAGTCCAGATGAGGGATCAGTAAATACAACGTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS CAA 72 bp | AACAGCAACAGGAAGATCATGAGGACTGCACAAAGTTaGAGGTGCCACATCTTGACAGGGGGAGGATGTTGG | + |
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Preference number: 6 (lower is better) Translates to: NSNRKIMRTAQS*RCHILTGGGCW Trigger: CCAACATCCTCCCCCTGTCAAGATGTGGCACCTCAAACTTTGTGCAGTCCTCATGATCTTCCTGTTGCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000296877.3 ENST00000483190.1 ENST00000485457.1 |
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| CDS TCA 72 bp | GAAAGTGTTGACACCCTGCTGCACACCTTGGAAGAGTaGTCATTCCATTCCGCAGATGCTGTAGACTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: ESVDTLLHTLEE*SFHSADAVDSE Trigger: TTCTGAGTCTACAGCATCTGCGGAATGGAATGATCACTCTTCCAAGGTGTGCAGCAGGGTGTCAACACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS CCA 72 bp | AGCATTGTCGGAGGTGACTGCTGTCCTTTCTTTCCCTaGTATGTACATCATTCCTGGGCCACACTTAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SIVGGDCCPFFP*YVHHSWATLKE Trigger: TTCCTTAAGTGTGGCCCAGGAATGATGTACATACCAGGGAAAGAAAGGACAGCAGTCACCTCCGACAATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000483190.1 |
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| CDS TCA 72 bp | TGCTCAAGGGCCACCTTTCAGGCACGTTGTATTTACTaGTCCCTCATCTGGACTTTGAGTGATTGTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: CSRATFQARCIY*SLIWTLSDCVA Trigger: AGCAACACAATCACTCAAAGTCCAGATGAGGGATCAGTAAATACAACGTGCCTGAAAGGTGGCCCTTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS GCA 72 bp | CAATATTCCATAGAACGGAGCATTGTCGGAGGTGACTaGTGTCCTTTCTTTCCCTGGTATGTACATCATTCC | + |
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Preference number: 6 (lower is better) Translates to: QYSIERSIVGGD*CPFFPWYVHHS Trigger: GGAATGATGTACATACCAGGGAAAGAAAGGACAGCAGTCACCTCCGACAATGCTCCGTTCTATGGAATATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000483190.1 |
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| CDS GCA 72 bp | CAAAGACATTCAGATATGAAAGTGTTGACACCCTGCTaGACACCTTGGAAGAGTGATCATTCCATTCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: QRHSDMKVLTPC*TPWKSDHSIPQ Trigger: CTGCGGAATGGAATGATCACTCTTCCAAGGTGTGCAGCAGGGTGTCAACACTTTCATATCTGAATGTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS CCA 72 bp | TGCTGTCCTTTCTTTCCCTGGTATGTACATCATTCCTaGGCCACACTTAAGGAACAGCGTCTTTTTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: CCPFFPWYVHHS*ATLKEQRLFLH Trigger: ATGCAGAAAAAGACGCTGTTCCTTAAGTGTGGCCCAGGAATGATGTACATACCAGGGAAAGAAAGGACAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296877.3 ENST00000483190.1 |
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| CDS CAA 90 bp | GGGACAGTTCCTACTTCCTTTTATAGACTGACATCAACTCTTGCATaGTTACTGGGTGAGATGGGGGCAAAGTTTATATTTGTAATCAGA | + |
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Preference number: 6 (lower is better) Translates to: GTVPTSFYRLTSTLA*LLGEMGAKFIFVIR Trigger: TCTGATTACAAATATAAACTTTGCCCCCATCTCACCCAGTAACAATGCAAGAGTTGATGTCAGTCTATAAAAGGAAGTAGGAACTGTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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| CDS GCA 72 bp | AATCAATTTAATAAGTTAATGTCTACCGGAGGAATGTaGTCAAGGGCCACCTTTCAGGCACGTTGTATTTAC | + |
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Preference number: 6 (lower is better) Translates to: NQFNKLMSTGGM*SRATFQARCIY Trigger: GTAAATACAACGTGCCTGAAAGGTGGCCCTTGAGCACATTCCTCCGGTAGACATTAACTTATTAAATTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483190.1 |
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