RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LDLRAD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000203985

Ensembl transcript IDs: ENST00000371360.2, ENST00000371362.7, ENST00000420619.5, ENST00000545928.5

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGGTATAATCACACTGGTAGCTGGAAAGCCTTCTGGGCTGGGGTaGCATAGGCTGTATTTGGGTTCCAGTTCCAGCGCTGACTTTGCT +
Preference number: 1 (lower is better)
Translates to: QGIITLVAGKPSGLG*HRLYLGSSSSADFA
Trigger: AGCAAAGTCAGCGCTGGAACTGGAACCCAAATACAGCCTATGGCACCCCAGCCCAGAAGGCTTTCCAGCTACCAGTGTGATTATACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR GCA 90 bp AGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTaGTCTTTCTCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGG +
Preference number: 1 (lower is better)
Translates to: RAGWTDRRLVRSPSS*SFSRSSILQLRASW
Trigger: CCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGAGAAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CCA 90 bp CTCTTTCTCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTaGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTG +
Preference number: 1 (lower is better)
Translates to: LFLQIFYSTAQSFLG*LPTGRMPDILFHVL
Trigger: CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CCA 90 bp AGCTGCTCTTTCTCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTaGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATG +
Preference number: 1 (lower is better)
Translates to: SCSFSRSSILQLRAS*GGFPLVGCQISCFM
Trigger: CATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGAGAAAGAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR GCA 90 bp ATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAGGATaGCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCAG +
Preference number: 1 (lower is better)
Translates to: ILQLRASWGGFPLVG*QISCFMCCVTWLNQ
Trigger: CTGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR GCA 90 bp TCTGGGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTaGCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACAGAAGCA +
Preference number: 1 (lower is better)
Translates to: SGPQFSHPSNGNIHP*LPGWCEAGKISTEA
Trigger: TGCTTCTGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CCA 90 bp TTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTaGTGTGAAGCTGGAAAGATAAGCACAGAAGCAGCTCATTCAGGC +
Preference number: 1 (lower is better)
Translates to: FSHPSNGNIHPCLPG*CEAGKISTEAAHSG
Trigger: GCCTGAATGAGCTGCTTCTGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR TCA 90 bp AGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTATTCAGAAATaGTGTGTAGATCCCATTTCAAAGGCTGCTTCCTGCCCTTGTGCG +
Preference number: 1 (lower is better)
Translates to: RLNNLKGGEKIPIQK*CVDPISKAASCPCA
Trigger: CGCACAAGGGCAGGAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
3UTR CCA 90 bp TTAGCAGATTTCCTCTGTGTGGCCCCAGAGACAGGCATGAAATCATaGAAGCAGATTCCCTTCGTCTTTGTTTGTGTTTGTGTTTTGTTT +
Preference number: 1 (lower is better)
Translates to: LADFLCVAPETGMKS*KQIPFVFVCVCVLF
Trigger: AAACAAAACACAAACACAAACAAAGACGAAGGGAATCTGCTTCCATGATTTCATGCCTGTCTCTGGGGCCACACAGAGGAAATCTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp TGTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGGTGGTCACAGCTCACTaGAGCCTTGACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: CLPRQEPSHQADPKSLFQVVTAH*SLDLLG
Trigger: ACCCAGGAGGTCAAGGCTGCAGTGAGCTGTGACCAC...CTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAGTGGTCACAGCTCACTaGAGCCTTGACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRVVTAH*SLDLLG
Trigger: ACCCAGGAGGTCAAGGCTGCAGTGAGCTGTGACCAC...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR TCA 90 bp TGTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGTGGAGTGCAGTGGCATaGTCATGCCTCATTGCAGCC +
Preference number: 2 (lower is better)
Translates to: CLPRQEPSHQADPKSLFQWSAVA*SCLIAA
Trigger: GGCTGCAATGAGGCATGATCATGCCACTGCACTCCA...CTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAACTCCTGGGCTCAAGTaGGACACTTCCACCTCAGTG +
Preference number: 2 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRTPGLK*DTSTSV
Trigger: CACTGAGGTGGAAGTGTCCCACTTGAGCCCAGGAGT...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR TCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGAGCTCACTGCAGCCTTaGCCTCCTGGGTTCACACAG +
Preference number: 2 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLSSLQP*PPGFTQ
Trigger: CTGTGTGAACCCAGGAGGTCAAGGCTGCAGTGAGCT...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTGTGGTCACAGCTCACTaGAGCCTTGACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFVVTAH*SLDLLG
Trigger: ACCCAGGAGGTCAAGGCTGCAGTGAGCTGTGACCAC...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGACCGCAGAGACTGCCCTaGCCAAGGTATAATCACACT +
Preference number: 2 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRPQRLP*PRYNHT
Trigger: AGTGTGATTATACCTTGGCCAGGGCAGTCTCTGCGG...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CAA 90 bp TGGGGTGCCATAGGCTGTATTTGGGTTCCAGTTCCAGCGCTGACTTaGCTCTATGATTCTGGACAAGTCATCGCCCTCTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: WGAIGCIWVPVPALT*LYDSGQVIALSGPQ
Trigger: CTGAGGCCCAGAGAGGGCGATGACTTGTCCAGAATCATAGAGCAAAGTCAGCGCTGGAACTGGAACCCAAATACAGCCTATGGCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR TCA 90 bp TGTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGCGTATGTGCCATCCATaGAGGCTAAACTCGGCTTGT +
Preference number: 2 (lower is better)
Translates to: CLPRQEPSHQADPKSLFQRMCHP*RLNSAC
Trigger: ACAAGCCGAGTTTAGCCTTCATGGATGGCACATACG...CTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTTTGCTCAGGCTGGAGTaGAGTGGTGTGGTCACAGCT +
Preference number: 2 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFLLRLE*SGVVTA
Trigger: AGCTGTGACCACACCACTGCACTCCAGCCTGAGCAA...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTTGCTCAGGCTGGAGTaGAGTGGTGTGGTCACAGCT +
Preference number: 2 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLLLRLE*SGVVTA
Trigger: AGCTGTGACCACACCACTGCACTCCAGCCTGAGCAA...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGAGCCTCCCTAGTAGCTaGGACTATAGGTGTGCACCG +
Preference number: 2 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLSLPSS*DYRCAP
Trigger: CGGTGCACACCTATAGTCCCAGCTACTAGGGAGGCT...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGGTGAAGGGTTATCAGTaGCATTCCAGCCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLVKGYQ*HSSQPS
Trigger: GGAAGGCTGGCTGGAATGGCACTGATAACCCTTCAC...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTATTGCTCAGGCTGGAGTaGAGTGGTGTGGTCACAGCT +
Preference number: 2 (lower is better)
Translates to: SRSSILQLRASWGGFPLVLLRLE*SGVVTA
Trigger: AGCTGTGACCACACCACTGCACTCCAGCCTGAGCAA...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGATACCCCGCAGAGACTaGCCTGGCCAAGGTATAATC +
Preference number: 2 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMIPRRD*PGQGII
Trigger: GATTATACCTTGGCCAGGGCAGTCTCTGCGGGGTAT...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAAGCCTCCCTAGTAGCTaGGACTATAGGTGTGCACCG +
Preference number: 2 (lower is better)
Translates to: SRSSILQLRASWGGFPLVSLPSS*DYRCAP
Trigger: CGGTGCACACCTATAGTCCCAGCTACTAGGGAGGCT...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGAATCACACTGGTAGCTaGAAAGCCTTCTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMNHTGS*KAFWAG
Trigger: CCCAGCCCAGAAGGCTTTCCAGCTACCAGTGTGATT...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGATTCCCACTGGTAGGATaGCAGATATCCTGTTTCATG +
Preference number: 2 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRFPLVG*QISCFM
Trigger: CATGAAACAGGATATCTGGCATCCTACCAGTGGGAA...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CAA 90 bp GTCATCACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTaGGAGCAGTTAGCAGATTTCCTCTGTGTGGCCCCAGAGACAGGC +
Preference number: 2 (lower is better)
Translates to: VITLRDDEIRIHKYA*EQLADFLCVAPETG
Trigger: GCCTGTCTCTGGGGCCACACAGAGGAAATCTGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGTGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR TCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTACCCCAGAGACAGGCATaGAATCATGGAAGCAGATTC +
Preference number: 2 (lower is better)
Translates to: SRSSILQLRASWGGFPLVPQRQA*NHGSRF
Trigger: GAATCTGCTTCCATGATTTCATGCCTGTCTCTGGGG...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGCAAGCCCAGTATATCTaGCTTAGGTACCAAAGGGGT +
Preference number: 2 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMQAQYI*LRYQRG
Trigger: ACCCCTTTGGTACCTAAGGCAGATATACTGGGCTTG...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGACAAAGGGGTAGGAAGTaGCATATGTTTCACGTATGT +
Preference number: 2 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRQRGRK*HMFHVC
Trigger: ACATACGTGAAACATATGCCACTTCCTACCCCTTTG...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAAGGTGTGCACCGCCATaGCTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: SRSSILQLRASWGGFPLVRCAPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGCGGTGCACACCT...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTATGGTAATGAGCTCCTaGTCATTGGAAGCATTCAAG +
Preference number: 2 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFMVMSS*SLEAFK
Trigger: CTTGAATGCTTCCAATGACCAGGAGCTCATTACCAT...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CCA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGGGTGGAGAGCAGGTTaGACAGACAGAAGACTGGTG +
Preference number: 2 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCGWRAG*TDRRLV
Trigger: CACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCC...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CAA 90 bp CCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTaGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: PTGRMPDILFHVLCH*VKSVEPAGLTKLGK
Trigger: CTTCCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGTGAAGGGTTATCAGTaGCATTCCAGCCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLVKGYQ*HSSQPS
Trigger: GGAAGGCTGGCTGGAATGGCACTGATAACCCTTCAC...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCATCAAAGGCTGCTTCCTaGCCTTGTGCGCTAGGATTT +
Preference number: 2 (lower is better)
Translates to: TLRDDEIRIHKYALEQLASKAAS*PCALGF
Trigger: AAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp GTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATGTGAAGGGTTATCAGTaGCATTCCAGCCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: VIGSIQAEAEQLERRRENVKGYQ*HSSQPS
Trigger: GGAAGGCTGGCTGGAATGGCACTGATAACCCTTCAC...ATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTGTGAAGGGTTATCAGTaGCATTCCAGCCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPVKGYQ*HSSQPS
Trigger: GGAAGGCTGGCTGGAATGGCACTGATAACCCTTCAC...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACAAGGTGTGCACCGCCATaGCTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTRCAPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGCGGTGCACACCT...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTATATCCTGTTTCATGTaGTGTGTCACTTGGTTAAAT +
Preference number: 2 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFISCFM*CVTWLN
Trigger: ATTTAACCAAGTGACACAGCACATGAAACAGGATAT...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR GCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCACAAGCCCAGTATATCTaGCTTAGGTACCAAAGGGGT +
Preference number: 2 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSQAQYI*LRYQRG
Trigger: ACCCCTTTGGTACCTAAGGCAGATATACTGGGCTTG...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR TCA 90 bp GGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTTTGTGCGCTAGGATTTaGTTTTCATGTGAAGGGTTA +
Preference number: 2 (lower is better)
Translates to: GLSFLIHLMEIFILACLGLCARI*FSCEGL
Trigger: TAACCCTTCACATGAAAATCAAATCCTAGCGCACAA...ACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CCA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGATGGTAATGAGCTCCTaGTCATTGGAAGCATTCAAG +
Preference number: 2 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLMVMSS*SLEAFK
Trigger: CTTGAATGCTTCCAATGACCAGGAGCTCATTACCAT...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR TCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTTTGTGCGCTAGGATTTaGTTTTCATGTGAAGGGTTA +
Preference number: 2 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPLCARI*FSCEGL
Trigger: TAACCCTTCACATGAAAATCAAATCCTAGCGCACAA...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR TCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCTTGTGCGCTAGGATTTaGTTTTCATGTGAAGGGTTA +
Preference number: 2 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFLCARI*FSCEGL
Trigger: TAACCCTTCACATGAAAATCAAATCCTAGCGCACAA...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
3UTR GCA 72 bp ATCACACTGGTAGCTGGAAAGCCTTCTGGGCTGGGGTaGCATAGGCTGTATTTGGGTTCCAGTTCCAGCGCT +
Preference number: 3 (lower is better)
Translates to: ITLVAGKPSGLG*HRLYLGSSSSA
Trigger: AGCGCTGGAACTGGAACCCAAATACAGCCTATGGCACCCCAGCCCAGAAGGCTTTCCAGCTACCAGTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGAAGGCTAAACTCGGCTaGTCATTTAAGCCCCAGACA +
Preference number: 3 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKKAKLG*SFKPQT
Trigger: TGTCTGGGGCTTAAATGACAAGCCGAGTTTAGCCTT...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR GCA 72 bp CTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAGGATaGCAGATATCCTGTTTCATGTGCTGTGTCACTTGG +
Preference number: 3 (lower is better)
Translates to: LRASWGGFPLVG*QISCFMCCVTW
Trigger: CCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAAGCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CCA 72 bp CTCAAACGATCCTCCCATCTTAGCTTTCTGAGTGGCTaGGACTACAAGCATGCACCACCCCACCCAGCTACT +
Preference number: 3 (lower is better)
Translates to: LKRSSHLSFLSG*DYKHAPPHPAT
Trigger: AGTAGCTGGGTGGGGTGGTGCATGCTTGTAGTCCCAGCCACTCAGAAAGCTAAGATGGGAGGATCGTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CCA 72 bp GAAAGCCTTCTGGGCTGGGGTGCCATAGGCTGTATTTaGGTTCCAGTTCCAGCGCTGACTTTGCTCTATGAT +
Preference number: 3 (lower is better)
Translates to: ESLLGWGAIGCI*VPVPALTLLYD
Trigger: ATCATAGAGCAAAGTCAGCGCTGGAACTGGAACCCAAATACAGCCTATGGCACCCCAGCCCAGAAGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTATGAGCTCCTGGTCATaGGAAGCATTCAAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFMSSWS*EAFKQR
Trigger: CCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCAT...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGGGGAAGATGCTAAAGTaGCATCCAAGCCCAGTATAT +
Preference number: 3 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMGKMLK*HPSPVY
Trigger: ATATACTGGGCTTGGATGCAACTTTAGCATCTTCCC...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CCA 72 bp CAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTaGCTTCCCACTGGTAGGATGCCAGATATCCTGTTT +
Preference number: 3 (lower is better)
Translates to: QIFYSTAQSFLG*LPTGRMPDILF
Trigger: AAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTCAGAGGCTGAACAACTaGAAAGGAGGAGAGAAAATT +
Preference number: 3 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFQRLNN*KGGEKI
Trigger: AATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTG...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACAATGAGCTCCTGGTCATaGGAAGCATTCAAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTMSSWS*EAFKQR
Trigger: CCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCAT...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGAAGGCTAAACTCGGCTaGTCATTTAAGCCCCAGACA +
Preference number: 3 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGKAKLG*SFKPQT
Trigger: TGTCTGGGGCTTAAATGACAAGCCGAGTTTAGCCTT...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGATGAGCTCCTGGTCATaGGAAGCATTCAAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLMSSWS*EAFKQR
Trigger: CCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCAT...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CCA 72 bp TTCCTCTGTGTGGCCCCAGAGACAGGCATGAAATCATaGAAGCAGATTCCCTTCGTCTTTGTTTGTGTTTGT +
Preference number: 3 (lower is better)
Translates to: FLCVAPETGMKS*KQIPFVFVCVC
Trigger: ACAAACACAAACAAAGACGAAGGGAATCTGCTTCCATGATTTCATGCCTGTCTCTGGGGCCACACAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CCA 72 bp CCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTaGTGTGAAGCTGGAAAGATAAGCACAGAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: PSNGNIHPCLPG*CEAGKISTEAA
Trigger: AGCTGCTTCTGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp GGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTCATGTGCTGTGTCACTaGGTTAAATCAGTAGAGCCT +
Preference number: 3 (lower is better)
Translates to: GLSFLIHLMEIFILACLGHVLCH*VKSVEP
Trigger: AGGCTCTACTGATTTAACCAAGTGACACAGCACATG...ACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCAAAGGCTAAACTCGGCTaGTCATTTAAGCCCCAGACA +
Preference number: 3 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSKAKLG*SFKPQT
Trigger: TGTCTGGGGCTTAAATGACAAGCCGAGTTTAGCCTT...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR GCA 72 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTaGCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGC +
Preference number: 3 (lower is better)
Translates to: QFSHPSNGNIHP*LPGWCEAGKIS
Trigger: GCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR-3UTR CAA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGCAGAGGCTGAACAACTaGAAAGGAGGAGAGAAAATT +
Preference number: 3 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLQRLNN*KGGEKI
Trigger: AATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTG...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCCTTCCATGCTGGCCTaGGTGGCCCACTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKPSMLA*VAHSGS
Trigger: GGACCCTGAGTGGGCCACTCAGGCCAGCATGGAAGG...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TGTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGCCCAGGGCCGCAGGGTaGGCACACAGTTACTGGGCT +
Preference number: 4 (lower is better)
Translates to: CLPRQEPSHQADPKSLFQPRAAG*AHSYWA
Trigger: AGCCCAGTAACTGTGTGCCCACCCTGCGGCCCTGGG...CTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGACCATGCTGGCCTGAGTaGCCCACTCAGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRPCWPE*PTQGPG
Trigger: TCCCGGACCCTGAGTGGGCCACTCAGGCCAGCATGG...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTGCAGGCCCCGCGACGTaGGCAGCAGAGGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGAGPAT*AAEVAA
Trigger: GGCGGCCACCTCTGCTGCTCACGTCGCGGGGCCTGC...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371360.2
CDS-3UTR CCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGCGTGAGCAGCAGAGGTaGCCGCCGCCTGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMREQQR*PPPASP
Trigger: AGGGGAAGCAGGCGGCGGCCACCTCTGCTGCTCACG...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371360.2
CDS-3UTR CCA 90 bp TGTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGTTCCTGCTGCCCGACTaGGGCTGTGTGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: CLPRQEPSHQADPKSLFQFLLPD*GCVQRA
Trigger: AGCTCTCTGCACACAGCCCCAGTCGGGCAGCAGGAA...CTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAAAGTGGGGGAGGCTCTaGGGCACATCTCGGCACAAG +
Preference number: 4 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRKWGRL*GTSRHK
Trigger: CTTGTGCCGAGATGTGCCCCAGAGCCTCCCCCACTT...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCCTGCCTGGGTGGTGTaGAGCTGGAAAGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKPAWVV*SWKDKH
Trigger: GTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGG...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGCGCCGTGGGTACAGGTaGGAACGCCATCACAGACCC +
Preference number: 4 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLRRGYR*ERHHRP
Trigger: GGGTCTGTGATGGCGTTCGCACCTGTACCCACGGCG...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TGTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGTGGTCGCGGCAGAGATaGCTCGGTATACAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: CLPRQEPSHQADPKSLFQWSRQR*LGIQSQ
Trigger: CTGCGACTGTATACCGAGGCATCTCTGCCGCGACCA...CTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGCCAGCCAGCCTTCCATaGTGGCCTGAGTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLPASLP*WPEWPT
Trigger: AGTGGGCCACTCAGGCCAGCATGGAAGGCTGGCTGG...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGTTGCTCAGGCTGGAGTaGAGTGGTGTGGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKLLRLE*SGVVTA
Trigger: AGCTGTGACCACACCACTGCACTCCAGCCTGAGCAA...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTCCTCGTCCTCGCCGTaGGTACAGGTGCGAACGCCA +
Preference number: 4 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLSSSSP*VQVRTP
Trigger: TGGCGTTCGCACCTGTACCCACGGCGAGGACGAGGA...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGTCCTCGTCCTCGCCGTaGGTACAGGTGCGAACGCCA +
Preference number: 4 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMSSSSP*VQVRTP
Trigger: TGGCGTTCGCACCTGTACCCACGGCGAGGACGAGGA...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGGCCAGCCTTCCATGCTaGCCTGAGTGGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMASLPC*PEWPTQ
Trigger: CTGAGTGGGCCACTCAGGCCAGCATGGAAGGCTGGC...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGACAGCTCAGAGCTTCCTaGGGTGGCTTCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRQLRAS*GGFPLV
Trigger: TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTG...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGGTCTCGAACTCCTaGGCTCAAGTGGGACACTTC +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKLVSNS*AQVGHF
Trigger: GAAGTGTCCCACTTGAGCCCAGGAGTTCGAGACCAG...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTGACCAGTCGGAGCAGTaGTGTACATGGTCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFDQSEQ*CTWSRQ
Trigger: CTGCCGCGACCATGTACAGCACTGCTCCGACTGGTC...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGACATCACAGACCCCACTaGCTGGAATGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRHHRPH*LECSSS
Trigger: AGAGGAGCTGCATTCCAGCCAGTGGGGTCTGTGATG...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAGCCAGCCTTCCATGCTaGCCTGAGTGGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVASLPC*PEWPTQ
Trigger: CTGAGTGGGCCACTCAGGCCAGCATGGAAGGCTGGC...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAAGCCTCCCTAGTAGCTaGGACTATAGGTGTGCACCG +
Preference number: 4 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRSLPSS*DYRCAP
Trigger: CGGTGCACACCTATAGTCCCAGCTACTAGGGAGGCT...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TGTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAGCCTCCCTAGTAGCTaGGACTATAGGTGTGCACCG +
Preference number: 4 (lower is better)
Translates to: CLPRQEPSHQADPKSLFQSLPSS*DYRCAP
Trigger: CGGTGCACACCTATAGTCCCAGCTACTAGGGAGGCT...CTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGAATCACACTGGTAGCTaGAAAGCCTTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKNHTGS*KAFWAG
Trigger: CCCAGCCCAGAAGGCTTTCCAGCTACCAGTGTGATT...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCGTATGTGCCATCCATaGAGGCTAAACTCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKRMCHP*RLNSAC
Trigger: ACAAGCCGAGTTTAGCCTTCATGGATGGCACATACG...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGATGTCTTCGGTTTCCTaGTGCCCGACTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLMSSVS*CPTGAV
Trigger: CACAGCCCCAGTCGGGCAGCAGGAAACCGAAGACAT...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTTGGTCGCGGCAGAGATaGCTCGGTATACAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFWSRQR*LGIQSQ
Trigger: CTGCGACTGTATACCGAGGCATCTCTGCCGCGACCA...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTGCCGGGTCTCCACAGTaGGCCACAAGGAAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGAGSPQ*ATRKWG
Trigger: CCCCCACTTCCTTGTGGCCCACTGTGGAGACCCGGC...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTGAGCAGTGCTGTACATaGTCGCGGCAGAGATGCCTC +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFEQCCT*SRQRCL
Trigger: GAGGCATCTCTGCCGCGACCATGTACAGCACTGCTC...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTCAGCTCAGAGCTTCCTaGGGTGGCTTCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFQLRAS*GGFPLV
Trigger: TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTG...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAGGCTCCTGGGGTGCATaGTGGGAGTCCAAGAATGGT +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVGSWGA*WESKNG
Trigger: ACCATTCTTGGACTCCCATCATGCACCCCAGGAGCC...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371360.2
CDS-3UTR TCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGGTACTTGAAGAAGGTTaGAGGACAGCGCCACCACCC +
Preference number: 4 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLVLEEG*RTAPPP
Trigger: GGGTGGTGGCGCTGTCCTTCAACCTTCTTCAAGTAC...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGTACAGTCGCAGTACTTaGAGAAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKYSRST*RRLKDS
Trigger: GCTGTCCTTCAACCTTCTTCAAGTACTGCGACTGTA...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGCCTTCCATGCTGGCCTaGGTGGCCCACTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERPSMLA*VAHSGS
Trigger: GGACCCTGAGTGGGCCACTCAGGCCAGCATGGAAGG...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCACCTTCCATGCTGGCCTaGGTGGCCCACTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLAPSMLA*VAHSGS
Trigger: GGACCCTGAGTGGGCCACTCAGGCCAGCATGGAAGG...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTCCTGCCTGGGTGGTGTaGAGCTGGAAAGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFPAWVV*SWKDKH
Trigger: GTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGG...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACACCGACTGGGGCTGTGTaGAGAGAGCTCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTPTGAV*RELSTG
Trigger: ACCCGTGCTGAGCTCTCTGCACACAGCCCCAGTCGG...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGCCGACTGGGGCTGTGTaGAGAGAGCTCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGPTGAV*RELSTG
Trigger: ACCCGTGCTGAGCTCTCTGCACACAGCCCCAGTCGG...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAATGTCTTCGGTTTCCTaGTGCCCGACTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVMSSVS*CPTGAV
Trigger: CACAGCCCCAGTCGGGCAGCAGGAAACCGAAGACAT...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTCCAGCCAGCCTTCCATaGTGGCCTGAGTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGPASLP*WPEWPT
Trigger: AGTGGGCCACTCAGGCCAGCATGGAAGGCTGGCTGG...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCAAGCCCAGTATATCTaGCTTAGGTACCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKQAQYI*LRYQRG
Trigger: ACCCCTTTGGTACCTAAGGCAGATATACTGGGCTTG...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGGGAAATATTCATCCTTaGCTGCCTGGGTGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKGNIHP*LPGWCE
Trigger: TTCACACCACCCAGGCAGGCAAGGATGAATATTTCC...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGCCCAGGGCCGCAGGGTaGGCACACAGTTACTGGGCT +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERPRAAG*AHSYWA
Trigger: AGCCCAGTAACTGTGTGCCCACCCTGCGGCCCTGGG...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCACCCAGGGCCGCAGGGTaGGCACACAGTTACTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLAPRAAG*AHSYWA
Trigger: AGCCCAGTAACTGTGTGCCCACCCTGCGGCCCTGGG...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTCTGGTCTCGAACTCCTaGGCTCAAGTGGGACACTTC +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFLVSNS*AQVGHF
Trigger: GAAGTGTCCCACTTGAGCCCAGGAGTTCGAGACCAG...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGGGCTCAGTTCATCTaGACAGTCCCCGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLWAQFI*TVPAVV
Trigger: AACAACTGCGGGGACTGTTCAGATGAACTGAGCCCA...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAGTACTTGAAGAAGGTTaGAGGACAGCGCCACCACCC +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVVLEEG*RTAPPP
Trigger: GGGTGGTGGCGCTGTCCTTCAACCTTCTTCAAGTAC...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGCCCATCTTAGCTTTCTaGGTGGCTGGGACTACAAGC +
Preference number: 4 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMPILAF*VAGTTS
Trigger: GCTTGTAGTCCCAGCCACTCAGAAAGCTAAGATGGG...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTATGGAGTGCAGTGGCATaGTCATGCCTCATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVWSAVA*SCLIAA
Trigger: GGCTGCAATGAGGCATGATCATGCCACTGCACTCCA...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAGGGTGTCACACTTGCTaGCCCTCAATCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRGCHTC*PSISCF
Trigger: AAAACATGAGATTGAGGGTCAGCAAGTGTGACACCC...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGCCGACTGGGGCTGTGTaGAGAGAGCTCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERPTGAV*RELSTG
Trigger: ACCCGTGCTGAGCTCTCTGCACACAGCCCCAGTCGG...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGTCTTCGGTTTCCTGCTaGCCGACTGGGGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGSSVSC*PTGAVC
Trigger: GCACACAGCCCCAGTCGGGCAGCAGGAAACCGAAGA...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTTCTTCGGTTTCCTGCTaGCCGACTGGGGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGSSVSC*PTGAVC
Trigger: GCACACAGCCCCAGTCGGGCAGCAGGAAACCGAAGA...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCAGAGGGCCGCCACAGTTaGCAGGAGGAGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLAEGRHS*QEEQQR
Trigger: TCTCTGCTGCTCCTCCTGGCAACTGTGGCGGCCCTC...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371360.2
CDS-3UTR GCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCACGCCGTGGGTACAGGTaGGAACGCCATCACAGACCC +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLARRGYR*ERHHRP
Trigger: GGGTCTGTGATGGCGTTCGCACCTGTACCCACGGCG...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGCGCCGTGGGTACAGGTaGGAACGCCATCACAGACCC +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERRRGYR*ERHHRP
Trigger: GGGTCTGTGATGGCGTTCGCACCTGTACCCACGGCG...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTGACCAGTCGGAGCAGTaGTGTACATGGTCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGDQSEQ*CTWSRQ
Trigger: CTGCCGCGACCATGTACAGCACTGCTCCGACTGGTC...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTGTGAAGGGTTATCAGTaGCATTCCAGCCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFVKGYQ*HSSQPS
Trigger: GGAAGGCTGGCTGGAATGGCACTGATAACCCTTCAC...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGAGGTGTGCACCGCCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKRCAPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGCGGTGCACACCT...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGATACCCCGCAGAGACTaGCCTGGCCAAGGTATAATC +
Preference number: 4 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLIPRRD*PGQGII
Trigger: GATTATACCTTGGCCAGGGCAGTCTCTGCGGGGTAT...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACAAAGTGGGGGAGGCTCTaGGGCACATCTCGGCACAAG +
Preference number: 4 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTKWGRL*GTSRHK
Trigger: CTTGTGCCGAGATGTGCCCCAGAGCCTCCCCCACTT...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGCCATGCTGGCCTGAGTaGCCCACTCAGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLPCWPE*PTQGPG
Trigger: TCCCGGACCCTGAGTGGGCCACTCAGGCCAGCATGG...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGGCCAGCCTTCCATGCTaGCCTGAGTGGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERASLPC*PEWPTQ
Trigger: CTGAGTGGGCCACTCAGGCCAGCATGGAAGGCTGGC...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCAGCCAGCCTTCCATGCTaGCCTGAGTGGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLAASLPC*PEWPTQ
Trigger: CTGAGTGGGCCACTCAGGCCAGCATGGAAGGCTGGC...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAACTCCTGGGCTCAAGTaGGACACTTCCACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVTPGLK*DTSTSV
Trigger: CACTGAGGTGGAAGTGTCCCACTTGAGCCCAGGAGT...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TTCCTGGGGTGGCTTCCCACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGATCACATTTTTGGTCTaGGTAGATCCAGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: FLGWLPTGRMPDILFHVLITFLV*VDPGGR
Trigger: CCGGCCTCCTGGATCTACTCAGACCAAAAATGTGAT...CAGCACATGAAACAGGATATCTGGCATCCTACCAGTGGGAAGCCACCCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTATGGGCTCAGTTCATCTaGACAGTCCCCGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVWAQFI*TVPAVV
Trigger: AACAACTGCGGGGACTGTTCAGATGAACTGAGCCCA...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCCCTTCCATGCTGGCCTaGGTGGCCCACTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: IGSIQAEAEQLERRRENSPSMLA*VAHSGS
Trigger: GGACCCTGAGTGGGCCACTCAGGCCAGCATGGAAGG...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTCCAGCCAGCCTTCCATaGTGGCCTGAGTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCPASLP*WPEWPT
Trigger: AGTGGGCCACTCAGGCCAGCATGGAAGGCTGGCTGG...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGTCAAAGGCTGCTTCCTaGCCTTGTGCGCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMSKAAS*PCALGF
Trigger: AAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTTCAAAGGCTGCTTCCTaGCCTTGTGCGCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFSKAAS*PCALGF
Trigger: AAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGATATTCATCCTTGCCTaGCTGGGTGGTGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMIFILA*LGGVKL
Trigger: CAGCTTCACACCACCCAGGCAGGCAAGGATGAATAT...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCATTCCTGCTGCCCGACTaGGGCTGTGTGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLAFLLPD*GCVQRA
Trigger: AGCTCTCTGCACACAGCCCCAGTCGGGCAGCAGGAA...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAGGAATGCAGCTCCTCTaGTCATGGCACAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVGMQLL*SWHKKP
Trigger: AGGCTTCTTGTGCCATGACCAGAGGAGCTGCATTCC...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTAAGTGGGGGAGGCTCTaGGGCACATCTCGGCACAAG +
Preference number: 4 (lower is better)
Translates to: GLSFLIHLMEIFILACLGKWGRL*GTSRHK
Trigger: CTTGTGCCGAGATGTGCCCCAGAGCCTCCCCCACTT...ACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCAGCCGGGTCTCCACAGTaGGCCACAAGGAAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSAGSPQ*ATRKWG
Trigger: CCCCCACTTCCTTGTGGCCCACTGTGGAGACCCGGC...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATCCATGCTGGCCTGAGTaGCCCACTCAGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: VIGSIQAEAEQLERRRENPCWPE*PTQGPG
Trigger: TCCCGGACCCTGAGTGGGCCACTCAGGCCAGCATGG...ATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGACTCTCTTTCAGAATATaGGTGTCACACTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRLSFRI*VSHLLT
Trigger: GGTCAGCAAGTGTGACACCCATATTCTGAAAGAGAG...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAAGTGGGGGAGGCTCTaGGGCACATCTCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERKWGRL*GTSPSP
Trigger: AGGGGAAGGAGATGTGCCCCAGAGCCTCCCCCACTT...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371362.7
CDS-3UTR TCA 90 bp GGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTAGCTCACTGCAGCCTTaGCCTCCTGGGTTCACACAG +
Preference number: 4 (lower is better)
Translates to: GLSFLIHLMEIFILACLGSSLQP*PPGFTQ
Trigger: CTGTGTGAACCCAGGAGGTCAAGGCTGCAGTGAGCT...ACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCAAGCTCACTGCAGCCTTaGCCTCCTGGGTTCACACAG +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLASSLQP*PPGFTQ
Trigger: CTGTGTGAACCCAGGAGGTCAAGGCTGCAGTGAGCT...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACACAGACAGAAGACTGGTaGGGAGCCCTTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTQTEDW*GALQAA
Trigger: AGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTG...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTCCTGCCTGGGTGGTGTaGAGCTGGAAAGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGPAWVV*SWKDKH
Trigger: GTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGG...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGATGTCTTCGGTTTCCTaGTGCCCGACTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERMSSVS*CPTGAV
Trigger: CACAGCCCCAGTCGGGCAGCAGGAAACCGAAGACAT...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGACCAGTCGGAGCAGTaGTGTACATGGTCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCDQSEQ*CTWSRQ
Trigger: CTGCCGCGACCATGTACAGCACTGCTCCGACTGGTC...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCAGTGGTCACAGCTCACTaGAGCCTTGACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLAVVTAH*SLDLLG
Trigger: ACCCAGGAGGTCAAGGCTGCAGTGAGCTGTGACCAC...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTTTGCTCAGGCTGGAGTaGAGTGGTGTGGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGLLRLE*SGVVTA
Trigger: AGCTGTGACCACACCACTGCACTCCAGCCTGAGCAA...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTGGAAATATTCATCCTTaGCTGCCTGGGTGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFGNIHP*LPGWCE
Trigger: TTCACACCACCCAGGCAGGCAAGGATGAATATTTCC...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTAGTGTTATACAAGCTTaGGCTCCTGGGGTGCATGAT +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFSVIQA*APGVHD
Trigger: ATCATGCACCCCAGGAGCCCAAGCTTGTATAACACT...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371360.2
CDS-3UTR CCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGCAGCTCCTCTGGTCATaGCACAAGAAGCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGQLLWS*HKKPVL
Trigger: CAGGACAGGCTTCTTGTGCCATGACCAGAGGAGCTG...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTCCTCGTCCTCGCCGTaGGTACAGGTGCGAACGCCA +
Preference number: 4 (lower is better)
Translates to: IGSIQAEAEQLERRRENSSSSSP*VQVRTP
Trigger: TGGCGTTCGCACCTGTACCCACGGCGAGGACGAGGA...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGAGCAGTGCTGTACATaGTCGCGGCAGAGATGCCTC +
Preference number: 4 (lower is better)
Translates to: GLSFLIHLMEIFILACLGEQCCT*SRQRCL
Trigger: GAGGCATCTCTGCCGCGACCATGTACAGCACTGCTC...ACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGACTCCTGGGCTCAAGTaGGACACTTCCACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGTPGLK*DTSTSV
Trigger: CACTGAGGTGGAAGTGTCCCACTTGAGCCCAGGAGT...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACATGGGCTCAGTTCATCTaGACAGTCCCCGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTWAQFI*TVPAVV
Trigger: AACAACTGCGGGGACTGTTCAGATGAACTGAGCCCA...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGTACTTGAAGAAGGTTaGAGGACAGCGCCACCACCC +
Preference number: 4 (lower is better)
Translates to: GLSFLIHLMEIFILACLGVLEEG*RTAPPP
Trigger: GGGTGGTGGCGCTGTCCTTCAACCTTCTTCAAGTAC...ACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGGTACTTGAAGAAGGTTaGAGGACAGCGCCACCACCC +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERVLEEG*RTAPPP
Trigger: GGGTGGTGGCGCTGTCCTTCAACCTTCTTCAAGTAC...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGCAGACAGAAGACTGGTaGGGAGCCCTTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERQTEDW*GALQAA
Trigger: AGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTG...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTCAGACAGAAGACTGGTaGGGAGCCCTTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLSFLIHLMEIFILACLGQTEDW*GALQAA
Trigger: AGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTG...ACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGCCCATCTTAGCTTTCTaGGTGGCTGGGACTACAAGC +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGPILAF*VAGTTS
Trigger: GCTTGTAGTCCCAGCCACTCAGAAAGCTAAGATGGG...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGTGGAGTGCAGTGGCATaGTCATGCCTCATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERWSAVA*SCLIAA
Trigger: GGCTGCAATGAGGCATGATCATGCCACTGCACTCCA...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCCCCCACTGGCTGGAATaGAGCTCCTCTGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: IGSIQAEAEQLERRRENSPHWLE*SSSGHG
Trigger: GCCATGACCAGAGGAGCTGCATTCCAGCCAGTGGGG...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACAGTGAAGGGTTATCAGTaGCATTCCAGCCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTVKGYQ*HSSQPS
Trigger: GGAAGGCTGGCTGGAATGGCACTGATAACCCTTCAC...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCATTGCTCAGGCTGGAGTaGAGTGGTGTGGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLALLRLE*SGVVTA
Trigger: AGCTGTGACCACACCACTGCACTCCAGCCTGAGCAA...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGTTCCCACTGGTAGGATaGCAGATATCCTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMFPLVG*QISCFM
Trigger: CATGAAACAGGATATCTGGCATCCTACCAGTGGGAA...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGATACCCCGCAGAGACTaGCCTGGCCAAGGTATAATC +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGIPRRD*PGQGII
Trigger: GATTATACCTTGGCCAGGGCAGTCTCTGCGGGGTAT...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTTTCCTGCTGCCCGACTaGGGCTGTGTGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPFLLPD*GCVQRA
Trigger: AGCTCTCTGCACACAGCCCCAGTCGGGCAGCAGGAA...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTTCCTGCTGCCCGACTaGGGCTGTGTGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: IGSIQAEAEQLERRRENSFLLPD*GCVQRA
Trigger: AGCTCTCTGCACACAGCCCCAGTCGGGCAGCAGGAA...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGGGGTGGAGAGCAGGTTaGACAGACAGAAGACTGGTG +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERGWRAG*TDRRLV
Trigger: CACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCC...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCAGGGTGGAGAGCAGGTTaGACAGACAGAAGACTGGTG +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLAGWRAG*TDRRLV
Trigger: CACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCC...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGCCGCAGAGACTGCCCTaGCCAAGGTATAATCACACT +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGPQRLP*PRYNHT
Trigger: AGTGTGATTATACCTTGGCCAGGGCAGTCTCTGCGG...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCAACTCCTGGGCTCAAGTaGGACACTTCCACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLATPGLK*DTSTSV
Trigger: CACTGAGGTGGAAGTGTCCCACTTGAGCCCAGGAGT...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTCTCTCTTTCAGAATATaGGTGTCACACTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFLSFRI*VSHLLT
Trigger: GGTCAGCAAGTGTGACACCCATATTCTGAAAGAGAG...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTACAAGCTTGGGCTCCTaGGGGAAGACCTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGTSLGS*GKTLFM
Trigger: CATGAACAAGGTCTTCCCCCAGGAGCCCAAGCTTGT...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420619.5
CDS-3UTR CCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTAGTGTTATACAAGCTTaGGCTCCTTCCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGSVIQA*APSPPG
Trigger: CCCTGGAGGGGAAGGAGCCCAAGCTTGTATAACACT...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545928.5
3UTR CAA 72 bp CTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTaGGAGCAGTTAGCAGATTTCCTCTGTGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LRDDEIRIHKYA*EQLADFLCVAP
Trigger: TGGGGCCACACAGAGGAAATCTGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGCGTATGTGCCATCCATaGAGGCTAAACTCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGRMCHP*RLNSAC
Trigger: ACAAGCCGAGTTTAGCCTTCATGGATGGCACATACG...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGCCCATCTTAGCTTTCTaGGTGGCTGGGACTACAAGC +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERPILAF*VAGTTS
Trigger: GCTTGTAGTCCCAGCCACTCAGAAAGCTAAGATGGG...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCATGGTCGCGGCAGAGATaGCTCGGTATACAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSWSRQR*LGIQSQ
Trigger: CTGCGACTGTATACCGAGGCATCTCTGCCGCGACCA...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTGGTCGCGGCAGAGATaGCTCGGTATACAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: VIGSIQAEAEQLERRRENWSRQR*LGIQSQ
Trigger: CTGCGACTGTATACCGAGGCATCTCTGCCGCGACCA...ATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGGAGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCCCAGCCAGCCTTCCATaGTGGCCTGAGTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: RRENSYSEMMCRSHFKGCPASLP*WPEWPT
Trigger: AGTGGGCCACTCAGGCCAGCATGGAAGGCTGGCTGG...GCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTATTCCCACTGGTAGGATaGCAGATATCCTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVFPLVG*QISCFM
Trigger: CATGAAACAGGATATCTGGCATCCTACCAGTGGGAA...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACAATATTCATCCTTGCCTaGCTGGGTGGTGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTIFILA*LGGVKL
Trigger: CAGCTTCACACCACCCAGGCAGGCAAGGATGAATAT...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGCCTTCTGGGCTGGGGTaGCATAGGCTGTATTTGGGT +
Preference number: 4 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLPSGLG*HRLYLG
Trigger: ACCCAAATACAGCCTATGGCACCCCAGCCCAGAAGG...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTCTCCAGGGTGGGCTTTaGATTCAGCAGCAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCLQGGL*IQQQCS
Trigger: GCTACACTGCTGCTGAATCCAAAGCCCACCCTGGAG...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371360.2
ENST00000545928.5
CDS-3UTR CCA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGCATCACAGACCCCACTaGCTGGAATGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLHHRPH*LECSSS
Trigger: AGAGGAGCTGCATTCCAGCCAGTGGGGTCTGTGATG...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCGCCGGGTCTCCACAGTaGGCCACAAGGAAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFAGSPQ*ATRKWG
Trigger: CCCCCACTTCCTTGTGGCCCACTGTGGAGACCCGGC...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCCCCAGGGCCGCAGGGTaGGCACACAGTTACTGGGCT +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFPRAAG*AHSYWA
Trigger: AGCCCAGTAACTGTGTGCCCACCCTGCGGCCCTGGG...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCAGAGCAGTGCTGTACATaGTCGCGGCAGAGATGCCTC +
Preference number: 4 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSEQCCT*SRQRCL
Trigger: GAGGCATCTCTGCCGCGACCATGTACAGCACTGCTC...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCGAGCAGTGCTGTACATaGTCGCGGCAGAGATGCCTC +
Preference number: 4 (lower is better)
Translates to: IGSIQAEAEQLERRRENSEQCCT*SRQRCL
Trigger: GAGGCATCTCTGCCGCGACCATGTACAGCACTGCTC...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCCCATGCTGGCCTGAGTaGCCCACTCAGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFPCWPE*PTQGPG
Trigger: TCCCGGACCCTGAGTGGGCCACTCAGGCCAGCATGG...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGATGGTAATGAGCTCCTaGTCATTGGAAGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMMVMSS*SLEAFK
Trigger: CTTGAATGCTTCCAATGACCAGGAGCTCATTACCAT...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTCAGCTCAGAGCTTCCTaGGGTGGCTTCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPQLRAS*GGFPLV
Trigger: TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTG...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGCCGCAGAGACTGCCCTaGCCAAGGTATAATCACACT +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERPQRLP*PRYNHT
Trigger: AGTGTGATTATACCTTGGCCAGGGCAGTCTCTGCGG...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGAGCTTTCTGAGTGGCTaGGACTACAAGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGSFLSG*DYKHAP
Trigger: TGGTGCATGCTTGTAGTCCCAGCCACTCAGAAAGCT...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACAAGTGTTATACAAGCTTaGGCTCCTGGGGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTSVIQA*APGGRP
Trigger: AGGTCTTCCCCCAGGAGCCCAAGCTTGTATAACACT...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420619.5
3UTR CAA 72 bp ATAGGCTGTATTTGGGTTCCAGTTCCAGCGCTGACTTaGCTCTATGATTCTGGACAAGTCATCGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IGCIWVPVPALT*LYDSGQVIALS
Trigger: AGAGAGGGCGATGACTTGTCCAGAATCATAGAGCAAAGTCAGCGCTGGAACTGGAACCCAAATACAGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTTTGTGCGCTAGGATTTaGTTTTCATGTGAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFLCARI*FSCEGL
Trigger: TAACCCTTCACATGAAAATCAAATCCTAGCGCACAA...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCATGGAGTGCAGTGGCATaGTCATGCCTCATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSWSAVA*SCLIAA
Trigger: GGCTGCAATGAGGCATGATCATGCCACTGCACTCCA...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACAGGGTGTCACACTTGCTaGCCCTCAATCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTGCHTC*PSISCF
Trigger: AAAACATGAGATTGAGGGTCAGCAAGTGTGACACCC...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTGGGTGTCACACTTGCTaGCCCTCAATCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGGCHTC*PSISCF
Trigger: AAAACATGAGATTGAGGGTCAGCAAGTGTGACACCC...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGGAGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCCCCCACTGGCTGGAATaGAGCTCCTCTGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: RRENSYSEMMCRSHFKGCPHWLE*SSSGHG
Trigger: GCCATGACCAGAGGAGCTGCATTCCAGCCAGTGGGG...GCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp ACTCTAAGGGATGACGAGATTAGGATCCACAAGTATGCCTTGGAGCAGTTAGCAATATTCATCCTTGCCTaGCTGGGTGGTGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TLRDDEIRIHKYALEQLAIFILA*LGGVKL
Trigger: CAGCTTCACACCACCCAGGCAGGCAAGGATGAATAT...TGCTAACTGCTCCAAGGCATACTTGTGGATCCTAATCTCGTCATCCCTTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTGGAAATATTCATCCTTaGCTGCCTGGGTGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGGNIHP*LPGWCE
Trigger: TTCACACCACCCAGGCAGGCAAGGATGAATATTTCC...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCACAGCTCCTCTGGTCATaGCACAAGAAGCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSQLLWS*HKKPVL
Trigger: CAGGACAGGCTTCTTGTGCCATGACCAGAGGAGCTG...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCACATCACAGACCCCACTaGCTGGAATGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSHHRPH*LECSSS
Trigger: AGAGGAGCTGCATTCCAGCCAGTGGGGTCTGTGATG...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCAAGCCTCCCTAGTAGCTaGGACTATAGGTGTGCACCG +
Preference number: 4 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSSLPSS*DYRCAP
Trigger: CGGTGCACACCTATAGTCCCAGCTACTAGGGAGGCT...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTACAAAGGGGTAGGAAGTaGCATATGTTTCACGTATGT +
Preference number: 4 (lower is better)
Translates to: SRSSILQLRASWGGFPLVQRGRK*HMFHVC
Trigger: ACATACGTGAAACATATGCCACTTCCTACCCCTTTG...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTGGGTGGAGAGCAGGTTaGACAGACAGAAGACTGGTG +
Preference number: 4 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPGWRAG*TDRRLV
Trigger: CACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCC...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGAATCACACTGGTAGCTaGAAAGCCTTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLNHTGS*KAFWAG
Trigger: CCCAGCCCAGAAGGCTTTCCAGCTACCAGTGTGATT...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGCCGCAGAGACTGCCCTaGCCAAGGTATAATCACACT +
Preference number: 4 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLPQRLP*PRYNHT
Trigger: AGTGTGATTATACCTTGGCCAGGGCAGTCTCTGCGG...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGCTTTCTGAGTGGCTaGGACTACAAGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERSFLSG*DYKHAP
Trigger: TGGTGCATGCTTGTAGTCCCAGCCACTCAGAAAGCT...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTATCACATTTTTGGTCTaGGTAGATCCAGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCITFLV*VDPGGR
Trigger: CCGGCCTCCTGGATCTACTCAGACCAAAAATGTGAT...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGTACAGTCGCAGTACTTaGAGAAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERYSRST*RRLKDS
Trigger: GCTGTCCTTCAACCTTCTTCAAGTACTGCGACTGTA...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTCCCCAGAGACAGGCATaGAATCATGGAAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCPQRQA*NHGSRF
Trigger: GAATCTGCTTCCATGATTTCATGCCTGTCTCTGGGG...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTATACCCCGCAGAGACTaGCCTGGCCAAGGTATAATC +
Preference number: 4 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPIPRRD*PGQGII
Trigger: GATTATACCTTGGCCAGGGCAGTCTCTGCGGGGTAT...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTGGAATGCAGCTCCTCTaGTCATGGCACAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPGMQLL*SWHKKP
Trigger: AGGCTTCTTGTGCCATGACCAGAGGAGCTGCATTCC...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTAATCACACTGGTAGCTaGAAAGCCTTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPNHTGS*KAFWAG
Trigger: CCCAGCCCAGAAGGCTTTCCAGCTACCAGTGTGATT...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGTACAGTCGCAGTACTTaGAGAAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLYSRST*RRLKDS
Trigger: GCTGTCCTTCAACCTTCTTCAAGTACTGCGACTGTA...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTCCCCAGAGACAGGCATaGAATCATGGAAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPPQRQA*NHGSRF
Trigger: GAATCTGCTTCCATGATTTCATGCCTGTCTCTGGGG...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCCCCCAGAGACAGGCATaGAATCATGGAAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: IGSIQAEAEQLERRRENSPQRQA*NHGSRF
Trigger: GAATCTGCTTCCATGATTTCATGCCTGTCTCTGGGG...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATCGTATGTGCCATCCATaGAGGCTAAACTCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VIGSIQAEAEQLERRRENRMCHP*RLNSAC
Trigger: ACAAGCCGAGTTTAGCCTTCATGGATGGCACATACG...ATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTCAAAGGCTGCTTCCTaGCCTTGTGCGCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: IGSIQAEAEQLERRRENSSKAAS*PCALGF
Trigger: AAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCGTGGTCACAGCTCACTaGAGCCTTGACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFVVTAH*SLDLLG
Trigger: ACCCAGGAGGTCAAGGCTGCAGTGAGCTGTGACCAC...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGATATCCTGTTTCATGTaGTGTGTCACTTGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMISCFM*CVTWLN
Trigger: ATTTAACCAAGTGACACAGCACATGAAACAGGATAT...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTAGGAGCCCTTCAAGCTaGTCTTTCTCCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCRSPSS*SFSRSS
Trigger: AGAAGATCTGGAGAAAGAGCAGCTTGAAGGGCTCCT...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGAGGAGCCCTTCAAGCTaGTCTTTCTCCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLRSPSS*SFSRSS
Trigger: AGAAGATCTGGAGAAAGAGCAGCTTGAAGGGCTCCT...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGGAGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCCCTTCTGGGCTGGGGTaGCATAGGCTGTATTTGGGT +
Preference number: 4 (lower is better)
Translates to: RRENSYSEMMCRSHFKGCPSGLG*HRLYLG
Trigger: ACCCAAATACAGCCTATGGCACCCCAGCCCAGAAGG...GCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTATGGTAATGAGCTCCTaGTCATTGGAAGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGMVMSS*SLEAFK
Trigger: CTTGAATGCTTCCAATGACCAGGAGCTCATTACCAT...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AGGAGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCCTGGTCTCGAACTCCTaGGCTCAAGTGGGACACTTC +
Preference number: 4 (lower is better)
Translates to: RRENSYSEMMCRSHFKGCLVSNS*AQVGHF
Trigger: GAAGTGTCCCACTTGAGCCCAGGAGTTCGAGACCAG...GCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATAGCTTTCTGAGTGGCTaGGACTACAAGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: VIGSIQAEAEQLERRRENSFLSG*DYKHAP
Trigger: TGGTGCATGCTTGTAGTCCCAGCCACTCAGAAAGCT...ATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGCTCTCTTTCAGAATATaGGTGTCACACTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: NELLVIGSIQAEAEQLERLSFRI*VSHLLT
Trigger: GGTCAGCAAGTGTGACACCCATATTCTGAAAGAGAG...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
3UTR CAA 72 bp TTCACGTATGTGCCATCCATGAAGGCTAAACTCGGCTaGTCATTTAAGCCCCAGACATGTCATCACTCTAAG +
Preference number: 4 (lower is better)
Translates to: FTYVPSMKAKLG*SFKPQTCHHSK
Trigger: CTTAGAGTGATGACATGTCTGGGGCTTAAATGACAAGCCGAGTTTAGCCTTCATGGATGGCACATACGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp AGGAGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTGGGCTCAGTTCATCTaGACAGTCCCCGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: RRENSYSEMMCRSHFKGCWAQFI*TVPAVV
Trigger: AACAACTGCGGGGACTGTTCAGATGAACTGAGCCCA...GCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTACAGTCGCAGTACTTaGAGAAGGTTGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: VIGSIQAEAEQLERRRENYSRST*RRLKDS
Trigger: GCTGTCCTTCAACCTTCTTCAAGTACTGCGACTGTA...ATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCCTTGGGCTCCTGGGGTaGATGATGGGAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFLGLLG*MMGVQE
Trigger: TTCTTGGACTCCCATCATGCACCCCAGGAGCCCAAG...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371360.2
CDS-3UTR GCA 90 bp GTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATAGGAGCCCTTCAAGCTaGTCTTTCTCCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: VIGSIQAEAEQLERRRENRSPSS*SFSRSS
Trigger: AGAAGATCTGGAGAAAGAGCAGCTTGAAGGGCTCCT...ATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCCCTTCTGGGCTGGGGTaGCATAGGCTGTATTTGGGT +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFPSGLG*HRLYLG
Trigger: ACCCAAATACAGCCTATGGCACCCCAGCCCAGAAGG...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCCAGCTCCTCTGGTCATaGCACAAGAAGCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFQLLWS*HKKPVL
Trigger: CAGGACAGGCTTCTTGTGCCATGACCAGAGGAGCTG...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTCAAAGGGGTAGGAAGTaGCATATGTTTCACGTATGT +
Preference number: 4 (lower is better)
Translates to: GLSFLIHLMEIFILACLGQRGRK*HMFHVC
Trigger: ACATACGTGAAACATATGCCACTTCCTACCCCTTTG...ACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCGTGAAGGGTTATCAGTaGCATTCCAGCCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFVKGYQ*HSSQPS
Trigger: GGAAGGCTGGCTGGAATGGCACTGATAACCCTTCAC...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCGGAATGCAGCTCCTCTaGTCATGGCACAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFGMQLL*SWHKKP
Trigger: AGGCTTCTTGTGCCATGACCAGAGGAGCTGCATTCC...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCATCACATTTTTGGTCTaGGTAGATCCAGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFITFLV*VDPGGR
Trigger: CCGGCCTCCTGGATCTACTCAGACCAAAAATGTGAT...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCTCAAAGGCTGCTTCCTaGCCTTGTGCGCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFSKAAS*PCALGF
Trigger: AAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGGAGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCCAAGCCCAGTATATCTaGCTTAGGTACCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: RRENSYSEMMCRSHFKGCQAQYI*LRYQRG
Trigger: ACCCCTTTGGTACCTAAGGCAGATATACTGGGCTTG...GCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGATATCCTGTTTCATGTaGTGTGTCACTTGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: VLCHLVKSVEPAGLTKLGISCFM*CVTWLN
Trigger: ATTTAACCAAGTGACACAGCACATGAAACAGGATAT...CCCCAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCAATGGTAATGAGCTCCTaGTCATTGGAAGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSMVMSS*SLEAFK
Trigger: CTTGAATGCTTCCAATGACCAGGAGCTCATTACCAT...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTATGGTAATGAGCTCCTaGTCATTGGAAGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPMVMSS*SLEAFK
Trigger: CTTGAATGCTTCCAATGACCAGGAGCTCATTACCAT...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACATTATTAATTTTTCAGTaGGGATATGTCTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTLLIFQ*GYVCLP
Trigger: AGGGAGACAGACATATCCCCACTGAAAAATTAATAA...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTTTATTAATTTTTCAGTaGGGATATGTCTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SKAASCPCALGFDFHVKGLLIFQ*GYVCLP
Trigger: AGGGAGACAGACATATCCCCACTGAAAAATTAATAA...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCATTGTGCGCTAGGATTTaGTTTTCATGTGAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSLCARI*FSCEGL
Trigger: TAACCCTTCACATGAAAATCAAATCCTAGCGCACAA...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp GTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTTGTGCGCTAGGATTTaGTTTTCATGTGAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: VIGSIQAEAEQLERRRENLCARI*FSCEGL
Trigger: TAACCCTTCACATGAAAATCAAATCCTAGCGCACAA...ATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR TCA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTTGTGCGCTAGGATTTaGTTTTCATGTGAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: IGSIQAEAEQLERRRENSLCARI*FSCEGL
Trigger: TAACCCTTCACATGAAAATCAAATCCTAGCGCACAA...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp GGCCTCAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTATATCCTGTTTCATGTaGTGTGTCACTTGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: GLSFLIHLMEIFILACLGISCFM*CVTWLN
Trigger: ATTTAACCAAGTGACACAGCACATGAAACAGGATAT...ACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTGAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR GCA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCAGGTGTGCACCGCCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFRCAPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGCGGTGCACACCT...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CCA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTTTATTAATTTTTCAGTaGGGATATGTCTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCLLIFQ*GYVCLP
Trigger: AGGGAGACAGACATATCCCCACTGAAAAATTAATAA...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS CCA 90 bp CGTCCTCGCCGTGGGTACAGGTGCGAACGCCATCACAGACCCCACTaGCTGGAATGCAGCTCCTCTGGTCATGGCACAAGAAGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: RPRRGYRCERHHRPH*LECSSSGHGTRSLS
Trigger: GGACAGGCTTCTTGTGCCATGACCAGAGGAGCTGCATTCCAGCCAGTGGGGTCTGTGATGGCGTTCGCACCTGTACCCACGGCGAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS CCA 90 bp CTCTGGGGCACATCTCGGCACAAGCTCTCATCCTCGTCCTCGCCGTaGGTACAGGTGCGAACGCCATCACAGACCCCACTGGCTGGAATG +
Preference number: 5 (lower is better)
Translates to: LWGTSRHKLSSSSSP*VQVRTPSQTPLAGM
Trigger: CATTCCAGCCAGTGGGGTCTGTGATGGCGTTCGCACCTGTACCCACGGCGAGGACGAGGATGAGAGCTTGTGCCGAGATGTGCCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS CCA 90 bp AGGGTTATCAGTGCCATTCCAGCCAGCCTTCCATGCTGGCCTGAGTaGCCCACTCAGGGTCCGGGACAGGCATACTCATCGGACCAGTCG +
Preference number: 5 (lower is better)
Translates to: RVISAIPASLPCWPE*PTQGPGQAYSSDQS
Trigger: CGACTGGTCCGATGAGTATGCCTGTCCCGGACCCTGAGTGGGCCACTCAGGCCAGCATGGAAGGCTGGCTGGAATGGCACTGATAACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS TCA 90 bp GTACATGGTCGCGGCAGAGATGCCTCGGTATACAGTCGCAGTACTTaGAGAAGGTTGAAGGACAGCGCCACCACCCAGGGCCGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: VHGRGRDASVYSRST*RRLKDSATTQGRRV
Trigger: CACCCTGCGGCCCTGGGTGGTGGCGCTGTCCTTCAACCTTCTTCAAGTACTGCGACTGTATACCGAGGCATCTCTGCCGCGACCATGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS GCA 90 bp ACTCAGGGTCCGGGACAGGCATACTCATCGGACCAGTCGGAGCAGTaGTGTACATGGTCGCGGCAGAGATGCCTCGGTATACAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: TQGPGQAYSSDQSEQ*CTWSRQRCLGIQSQ
Trigger: CTGCGACTGTATACCGAGGCATCTCTGCCGCGACCATGTACAGCACTGCTCCGACTGGTCCGATGAGTATGCCTGTCCCGGACCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS CCA 90 bp CTCGCCGTGGGTACAGGTGCGAACGCCATCACAGACCCCACTGGCTaGAATGCAGCTCCTCTGGTCATGGCACAAGAAGCCTGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LAVGTGANAITDPTG*NAAPLVMAQEACPV
Trigger: AACAGGACAGGCTTCTTGTGCCATGACCAGAGGAGCTGCATTCCAGCCAGTGGGGTCTGTGATGGCGTTCGCACCTGTACCCACGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS GCA 90 bp CGTGGGTACAGGTGCGAACGCCATCACAGACCCCACTGGCTGGAATaGAGCTCCTCTGGTCATGGCACAAGAAGCCTGTCCTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: RGYRCERHHRPHWLE*SSSGHGTRSLSCLS
Trigger: TGACAAACAGGACAGGCTTCTTGTGCCATGACCAGAGGAGCTGCATTCCAGCCAGTGGGGTCTGTGATGGCGTTCGCACCTGTACCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS CCA 90 bp CCGGGACAGGCATACTCATCGGACCAGTCGGAGCAGTGCTGTACATaGTCGCGGCAGAGATGCCTCGGTATACAGTCGCAGTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: PGQAYSSDQSEQCCT*SRQRCLGIQSQYLK
Trigger: CTTCAAGTACTGCGACTGTATACCGAGGCATCTCTGCCGCGACCATGTACAGCACTGCTCCGACTGGTCCGATGAGTATGCCTGTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp GCTGGGGTGGAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGATGAGCTCCTGGTCATaGGAAGCATTCAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: AGVESRLDRQKTGEEPFKMSSWS*EAFKQR
Trigger: CCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCAT...CTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTCCACCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS GCA 90 bp TCATCGGACCAGTCGGAGCAGTGCTGTACATGGTCGCGGCAGAGATaGCTCGGTATACAGTCGCAGTACTTGAAGAAGGTTGAAGGACAG +
Preference number: 5 (lower is better)
Translates to: SSDQSEQCCTWSRQR*LGIQSQYLKKVEGQ
Trigger: CTGTCCTTCAACCTTCTTCAAGTACTGCGACTGTATACCGAGGCATCTCTGCCGCGACCATGTACAGCACTGCTCCGACTGGTCCGATGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp TGTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGGAACAGTCCCCGCAGTaGTTAGTGCCATCACATTTT +
Preference number: 5 (lower is better)
Translates to: CLPRQEPSHQADPKSLFQEQSPQ*LVPSHF
Trigger: AAAATGTGATGGCACTAACAACTGCGGGGACTGTTC...CTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp GTCTCCCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGGGTGTCACACTaGCTGACCCTCAATCTCATG +
Preference number: 5 (lower is better)
Translates to: VSLDRSPPIRQIPSLSFRIWVSH*LTLNLM
Trigger: CATGAGATTGAGGGTCAGCAAGTGTGACACCCATAT...TCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTCCCTGGGGGAAGACCTaGTTCATGTCTTCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SKAASCPCALGFDFHVKGPWGKT*FMSSVS
Trigger: GGAAACCGAAGACATGAACAAGGTCTTCCCCCAGGG...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000545928.5
CDS-3UTR CAA 90 bp GAGAGCAGGTTGGACAGACAGAAGACTGGTGAGGAGCCCTTCAAGCTGCTCTTTGAACAGTCCCCGCAGTaGTTAGTGCCATCACATTTT +
Preference number: 5 (lower is better)
Translates to: ESRLDRQKTGEEPFKLLFEQSPQ*LVPSHF
Trigger: AAAATGTGATGGCACTAACAACTGCGGGGACTGTTC...AAAGAGCAGCTTGAAGGGCTCCTCACCAGTCTTCTGTCTGTCCAACCTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp CCTCGACAGGAGCCCTCCCATCAGGCAGATCCCAAGTCTCTCTTTCAGAATATGAAGGCTAAACTCGGCTaGTCATTTAAGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: PRQEPSHQADPKSLFQNMKAKLG*SFKPQT
Trigger: TGTCTGGGGCTTAAATGACAAGCCGAGTTTAGCCTT...CATATTCTGAAAGAGAGACTTGGGATCTGCCTGATGGGAGGGCTCCTGTCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACACAGTGTTATACAAGCTaGGGCTCCTGGGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTQCYTS*GSWGKT
Trigger: GGTCTTCCCCCAGGAGCCCAAGCTTGTATAACACTG...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420619.5
CDS-3UTR CAA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGCCCTGGGGGAAGACCTaGTTCATGTCTTCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: NELLVIGSIQAEAEQLERPWGKT*FMSSVS
Trigger: GGAAACCGAAGACATGAACAAGGTCTTCCCCCAGGG...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000545928.5
CDS-3UTR CAA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAAAGGCTAAACTCGGCTaGTCATTTAAGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: SRSSILQLRASWGGFPLVKAKLG*SFKPQT
Trigger: TGTCTGGGGCTTAAATGACAAGCCGAGTTTAGCCTT...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp TCCAGATCTTCTATTCTACAGCTCAGAGCTTCCTGGGGTGGCTTCCCACTGGTAATATGGGTGTCACACTaGCTGACCCTCAATCTCATG +
Preference number: 5 (lower is better)
Translates to: SRSSILQLRASWGGFPLVIWVSH*LTLNLM
Trigger: CATGAGATTGAGGGTCAGCAAGTGTGACACCCATAT...TACCAGTGGGAAGCCACCCCAGGAAGCTCTGAGCTGTAGAATAGAAGATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACATCCTGGGGGAAGACCTaGTTCATGTCTTCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTSWGKT*FMSSVS
Trigger: GGAAACCGAAGACATGAACAAGGTCTTCCCCCAGGA...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420619.5
CDS-3UTR CAA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTCCCTGGGGGAAGACCTaGTTCATGTCTTCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCPWGKT*FMSSVS
Trigger: GGAAACCGAAGACATGAACAAGGTCTTCCCCCAGGG...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371360.2
ENST00000545928.5
CDS-3UTR CAA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGATGAGCTCCTGGTCATaGGAAGCATTCAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: NELLVIGSIQAEAEQLERMSSWS*EAFKQR
Trigger: CCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCAT...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTAAGGCTAAACTCGGCTaGTCATTTAAGCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: SKAASCPCALGFDFHVKGKAKLG*SFKPQT
Trigger: TGTCTGGGGCTTAAATGACAAGCCGAGTTTAGCCTT...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCACAGTGTTATACAAGCTaGGGCTCCTTCCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSQCYTS*GSFPSR
Trigger: CCTGGAGGGGAAGGAGCCCAAGCTTGTATAACACTG...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545928.5
CDS-3UTR CAA 90 bp GGAAATATTCATCCTTGCCTGCCTGGGTGGTGTGAAGCTGGAAAGATAAGCACACATGTGCTGTGTCACTaGGTTAAATCAGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: GNIHPCLPGWCEAGKISTHVLCH*VKSVEP
Trigger: AGGCTCTACTGATTTAACCAAGTGACACAGCACATG...TGTGCTTATCTTTCCAGCTTCACACCACCCAGGCAGGCAAGGATGAATATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp TCAAAGGCTGCTTCCTGCCCTTGTGCGCTAGGATTTGATTTTCATGTGAAGGGTCAGAGGCTGAACAACTaGAAAGGAGGAGAGAAAATT +
Preference number: 5 (lower is better)
Translates to: SKAASCPCALGFDFHVKGQRLNN*KGGEKI
Trigger: AATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTG...ACCCTTCACATGAAAATCAAATCCTAGCGCACAAGGGCAGGAAGCAGCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCAATGAGCTCCTGGTCATaGGAAGCATTCAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSMSSWS*EAFKQR
Trigger: CCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCAT...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp AATGAGCTCCTGGTCATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGGGGAAGATGCTAAAGTaGCATCCAAGCCCAGTATAT +
Preference number: 5 (lower is better)
Translates to: NELLVIGSIQAEAEQLERGKMLK*HPSPVY
Trigger: ATATACTGGGCTTGGATGCAACTTTAGCATCTTCCC...CCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAATGACCAGGAGCTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCGAACAGTCCCCGCAGTaGTTAGTGCCATCACATTTT +
Preference number: 5 (lower is better)
Translates to: IGSIQAEAEQLERRRENSEQSPQ*LVPSHF
Trigger: AAAATGTGATGGCACTAACAACTGCGGGGACTGTTC...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGATCCACAAGTATGCCTaGGAGCAGTTAGCAGATTTC +
Preference number: 5 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLIHKYA*EQLADF
Trigger: GAAATCTGCTAACTGCTCCAAGGCATACTTGTGGAT...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp CATGTGCTGTGTCACTTGGTTAAATCAGTAGAGCCTGCTGGGTTAACTAAACTGGGGAAGATGCTAAAGTaGCATCCAAGCCCAGTATAT +
Preference number: 5 (lower is better)
Translates to: HVLCHLVKSVEPAGLTKLGKMLK*HPSPVY
Trigger: ATATACTGGGCTTGGATGCAACTTTAGCATCTTCCC...CAGTTTAGTTAACCCAGCAGGCTCTACTGATTTAACCAAGTGACACAGCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp CAGTTTTCTCATCCATCTAATGGAAATATTCATCCTTGCCTGCCTGGGTGGTGTCATGTGCTGTGTCACTaGGTTAAATCAGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: QFSHPSNGNIHPCLPGWCHVLCH*VKSVEP
Trigger: AGGCTCTACTGATTTAACCAAGTGACACAGCACATG...ACACCACCCAGGCAGGCAAGGATGAATATTTCCATTAGATGGATGAGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp ATTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCATATGGGTGTCACACTaGCTGACCCTCAATCTCATG +
Preference number: 5 (lower is better)
Translates to: IGSIQAEAEQLERRRENSIWVSH*LTLNLM
Trigger: CATGAGATTGAGGGTCAGCAAGTGTGACACCCATAT...GGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCAAGAAGCCTGTCCTGTTaGTCAGTGTTATACAAGCTT +
Preference number: 5 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSRSLSC*SVLYKL
Trigger: AAGCTTGTATAACACTGACAAACAGGACAGGCTTCT...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp ACTGGTAGGATGCCAGATATCCTGTTTCATGTGCTGTGTCACTTGGTTAAATCACAGAGGCTGAACAACTaGAAAGGAGGAGAGAAAATT +
Preference number: 5 (lower is better)
Translates to: TGRMPDILFHVLCHLVKSQRLNN*KGGEKI
Trigger: AATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTG...TGATTTAACCAAGTGACACAGCACATGAAACAGGATATCTGGCATCCTACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp TTGGAAGCATTCAAGCAGAGGCTGAACAACTTGAAAGGAGGAGAGAAAATTCCTCAGAGGCTGAACAACTaGAAAGGAGGAGAGAAAATT +
Preference number: 5 (lower is better)
Translates to: LEAFKQRLNNLKGGEKIPQRLNN*KGGEKI
Trigger: AATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTG...AGGAATTTTCTCTCCTCCTTTCAAGTTGTTCAGCCTCTGCTTGAATGCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCGAACAGTCCCCGCAGTaGTTAGTGCCATCACATTTT +
Preference number: 5 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFEQSPQ*LVPSHF
Trigger: AAAATGTGATGGCACTAACAACTGCGGGGACTGTTC...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp AGGAGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCATCCACAAGTATGCCTaGGAGCAGTTAGCAGATTTC +
Preference number: 5 (lower is better)
Translates to: RRENSYSEMMCRSHFKGCIHKYA*EQLADF
Trigger: GAAATCTGCTAACTGCTCCAAGGCATACTTGTGGAT...GCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp AGGAGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCGGGAAGATGCTAAAGTaGCATCCAAGCCCAGTATAT +
Preference number: 5 (lower is better)
Translates to: RRENSYSEMMCRSHFKGCGKMLK*HPSPVY
Trigger: ATATACTGGGCTTGGATGCAACTTTAGCATCTTCCC...GCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp AGGAGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCAGAAGCCTGTCCTGTTaGTCAGTGTTATACAAGCTT +
Preference number: 5 (lower is better)
Translates to: RRENSYSEMMCRSHFKGCRSLSC*SVLYKL
Trigger: AAGCTTGTATAACACTGACAAACAGGACAGGCTTCT...GCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS-3UTR CAA 90 bp AGAGAAAATTCCTATTCAGAAATGATGTGTAGATCCCATTTCAAAGGCTGCTTCCATGTGCTGTGTCACTaGGTTAAATCAGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: RENSYSEMMCRSHFKGCFHVLCH*VKSVEP
Trigger: AGGCTCTACTGATTTAACCAAGTGACACAGCACATG...GAAGCAGCCTTTGAAATGGGATCTACACATCATTTCTGAATAGGAATTTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS CCA 72 bp GGTGGCCGCCGCCTGCTTCCCCTCCAGGGTGGGCTTTaGATTCAGCAGCAGTGTAGCCATTCTCTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: GGRRLLPLQGGL*IQQQCSHSLPG
Trigger: CCCAGGGAGAGAATGGCTACACTGCTGCTGAATCCAAAGCCCACCCTGGAGGGGAAGCAGGCGGCGGCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371360.2
CDS CCA 72 bp AGGGTTATCAGTGCCATTCCAGCCAGCCTTCCATGCTaGCCTGAGTGGCCCACTCAGGGTCCGGGACAGGCA +
Preference number: 6 (lower is better)
Translates to: RVISAIPASLPC*PEWPTQGPGQA
Trigger: TGCCTGTCCCGGACCCTGAGTGGGCCACTCAGGCCAGCATGGAAGGCTGGCTGGAATGGCACTGATAACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS CCA 72 bp ACATCTCGGCACAAGCTCTCATCCTCGTCCTCGCCGTaGGTACAGGTGCGAACGCCATCACAGACCCCACTG +
Preference number: 6 (lower is better)
Translates to: TSRHKLSSSSSP*VQVRTPSQTPL
Trigger: CAGTGGGGTCTGTGATGGCGTTCGCACCTGTACCCACGGCGAGGACGAGGATGAGAGCTTGTGCCGAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371360.2
ENST00000420619.5
ENST00000545928.5
CDS TCA 72 bp ATGCCTCGGTATACAGTCGCAGTACTTGAAGAAGGTTaGAGGACAGCGCCACCACCCAGGGCCGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: MPRYTVAVLEEG*RTAPPPRAAGW
Trigger: CCACCCTGCGGCCCTGGGTGGTGGCGCTGTCCTTCAACCTTCTTCAAGTACTGCGACTGTATACCGAGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS TCA 72 bp CGCGGCAGAGATGCCTCGGTATACAGTCGCAGTACTTaGAGAAGGTTGAAGGACAGCGCCACCACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: RGRDASVYSRST*RRLKDSATTQG
Trigger: GCCCTGGGTGGTGGCGCTGTCCTTCAACCTTCTTCAAGTACTGCGACTGTATACCGAGGCATCTCTGCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS GCA 72 bp TGGGGGAAGACCTTGTTCATGTCTTCGGTTTCCTGCTaGCCGACTGGGGCTGTGTGCAGAGAGCTCAGCACG +
Preference number: 6 (lower is better)
Translates to: WGKTLFMSSVSC*PTGAVCRELST
Trigger: CGTGCTGAGCTCTCTGCACACAGCCCCAGTCGGGCAGCAGGAAACCGAAGACATGAACAAGGTCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS GCA 72 bp CCGGGACAGGCATACTCATCGGACCAGTCGGAGCAGTaGTGTACATGGTCGCGGCAGAGATGCCTCGGTATA +
Preference number: 6 (lower is better)
Translates to: PGQAYSSDQSEQ*CTWSRQRCLGI
Trigger: TATACCGAGGCATCTCTGCCGCGACCATGTACAGCACTGCTCCGACTGGTCCGATGAGTATGCCTGTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS CCA 72 bp GACCTTGTTCATGTCTTCGGTTTCCTGCTGCCCGACTaGGGCTGTGTGCAGAGAGCTCAGCACGGGTTCCCT +
Preference number: 6 (lower is better)
Translates to: DLVHVFGFLLPD*GCVQRAQHGFP
Trigger: AGGGAACCCGTGCTGAGCTCTCTGCACACAGCCCCAGTCGGGCAGCAGGAAACCGAAGACATGAACAAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS CAA 90 bp TGTACATGGTCGCGGCAGAGATGCCTCGGTATACAGTCGCAGTACTaGAAGAAGGTTGAAGGACAGCGCCACCACCCAGGGCCGCAGGGT +
Preference number: 6 (lower is better)
Translates to: CTWSRQRCLGIQSQY*KKVEGQRHHPGPQG
Trigger: ACCCTGCGGCCCTGGGTGGTGGCGCTGTCCTTCAACCTTCTTCAAGTACTGCGACTGTATACCGAGGCATCTCTGCCGCGACCATGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS CCA 72 bp GCATACTCATCGGACCAGTCGGAGCAGTGCTGTACATaGTCGCGGCAGAGATGCCTCGGTATACAGTCGCAG +
Preference number: 6 (lower is better)
Translates to: AYSSDQSEQCCT*SRQRCLGIQSQ
Trigger: CTGCGACTGTATACCGAGGCATCTCTGCCGCGACCATGTACAGCACTGCTCCGACTGGTCCGATGAGTATGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS TCA 72 bp GTCCCCGCAGTTGTTAGTGCCATCACATTTTTGGTCTaGGTAGATCCAGGAGGCCGGGTCTCCACAGTGGGC +
Preference number: 6 (lower is better)
Translates to: VPAVVSAITFLV*VDPGGRVSTVG
Trigger: GCCCACTGTGGAGACCCGGCCTCCTGGATCTACTCAGACCAAAAATGTGATGGCACTAACAACTGCGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS CAA 90 bp CTGGAATGCAGCTCCTCTGGTCATGGCACAAGAAGCCTGTCCTGTTaGTCAGTGTTATACAAGCTTGGGCTCCTTCCCCTCCAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: LECSSSGHGTRSLSC*SVLYKLGLLPLQGG
Trigger: CCCACCCTGGAGGGGAAGGAGCCCAAGCTTGTATAACACTGACAAACAGGACAGGCTTCTTGTGCCATGACCAGAGGAGCTGCATTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545928.5
CDS GCA 72 bp CAGTCGGAGCAGTGCTGTACATGGTCGCGGCAGAGATaGCTCGGTATACAGTCGCAGTACTTGAAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: QSEQCCTWSRQR*LGIQSQYLKKV
Trigger: AACCTTCTTCAAGTACTGCGACTGTATACCGAGGCATCTCTGCCGCGACCATGTACAGCACTGCTCCGACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS TCA 72 bp GCAGGGTGGGCACACAGTTACTGGGCTCAGTTCATCTaGACAGTCCCCGCAGTTGTTAGTGCCATCACATTT +
Preference number: 6 (lower is better)
Translates to: AGWAHSYWAQFI*TVPAVVSAITF
Trigger: AAATGTGATGGCACTAACAACTGCGGGGACTGTTCAGATGAACTGAGCCCAGTAACTGTGTGCCCACCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371360.2
ENST00000371362.7
ENST00000420619.5
ENST00000545928.5
CDS CAA 90 bp CTGGAATGCAGCTCCTCTGGTCATGGCACAAGAAGCCTGTCCTGTTaGTCAGTGTTATACAAGCTTGGGCTCCTGGGGGAAGACCTTGTT +
Preference number: 6 (lower is better)
Translates to: LECSSSGHGTRSLSC*SVLYKLGLLGEDLV
Trigger: AACAAGGTCTTCCCCCAGGAGCCCAAGCTTGTATAACACTGACAAACAGGACAGGCTTCTTGTGCCATGACCAGAGGAGCTGCATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420619.5