RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LDLR (Homo sapiens)

Ensembl gene IDs: ENSG00000130164

Ensembl transcript IDs: ENST00000252444.9, ENST00000455727.6, ENST00000535915.5, ENST00000545707.5, ENST00000557933.5, ENST00000557958.1, ENST00000558013.5, ENST00000558518.6, ENST00000558528.1, ENST00000559340.1, ENST00000560173.1, ENST00000560467.1, ENST00000560502.5, ENST00000560628.1

Found 1018 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGGAGGATGGGCACCAGGCTGGTGTCCTGACAGCCACACCTGGGTaGAGGCCACGTGTCCTCACGGCCAAGGTAACCGGGTGTCTCAGG +
Preference number: 1 (lower is better)
Translates to: REDGHQAGVLTATPG*RPRVLTAKVTGCLR
Trigger: CCTGAGACACCCGGTTACCTTGGCCGTGAGGACACGTGGCCTGCACCCAGGTGTGGCTGTCAGGACACCAGCCTGGTGCCCATCCTCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CCA 90 bp GGGTCGGGAGGATGGGCACCAGGCTGGTGTCCTGACAGCCACACCTaGGTGCAGGCCACGTGTCCTCACGGCCAAGGTAACCGGGTGTCT +
Preference number: 1 (lower is better)
Translates to: GSGGWAPGWCPDSHT*VQATCPHGQGNRVS
Trigger: AGACACCCGGTTACCTTGGCCGTGAGGACACGTGGCCTGCACCCAGGTGTGGCTGTCAGGACACCAGCCTGGTGCCCATCCTCCCGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR GCA 90 bp CGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTaGAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: RPGQTADCSGAISAH*KLRFPGSHHSPASA
Trigger: GGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR TCA 90 bp TTTGAAGTCCCGGTCAACCTGCCCCTCTCTGTCCCCGGCATTCATTaGCACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACG +
Preference number: 1 (lower is better)
Translates to: FEVPVNLPLSVPGIH*HGLSLAWDPIPTHT
Trigger: CGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGACAGAGAGGGGCAGGTTGACCGGGACTTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR GCA 90 bp AGATTGGTGGATGAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTaGTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCCTGACATC +
Preference number: 1 (lower is better)
Translates to: RLVDEAGPGGPVGAI*CCVLKATCFSGPDI
Trigger: GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTCATCCACCAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR GCA 90 bp CAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTaGCCCTCTCTGTCCCCGGCATTCATTGACACGGGCTTTCCCTGG +
Preference number: 1 (lower is better)
Translates to: QFSIFTITALKSRST*PSLSPAFIDTGFPW
Trigger: CCAGGGAAAGCCCGTGTCAATGAATGCCGGGGACAGAGAGGGGCAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CCA 90 bp CCCTTTCCTGGCTTAAGGAAGGTACAAACCCACCTCGAAAGACACTaGGTGGGTCATGATTCGGGGGTGACAGGGCAAAGGCTAACCTGG +
Preference number: 1 (lower is better)
Translates to: PFPGLRKVQTHLERH*VGHDSGVTGQRLTW
Trigger: CCAGGTTAGCCTTTGCCCTGTCACCCCCGAATCATGACCCACCCAGTGTCTTTCGAGGTGGGTTTGTACCTTCCTTAAGCCAGGAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CCA 90 bp CACTGGGTGGGTCATGATTCGGGGGTGACAGGGCAAAGGCTAACCTaGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACT +
Preference number: 1 (lower is better)
Translates to: HWVGHDSGVTGQRLT*LSSKACIEEVNTLT
Trigger: AGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAGCCTTTGCCCTGTCACCCCCGAATCATGACCCACCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CCA 90 bp CCACGGATTCAGCCAGATCATTTCCGACGCCATGAATCCCTTTCCTaGCTTAAGGAAGGTACAAACCCACCTCGAAAGACACTGGGTGGG +
Preference number: 1 (lower is better)
Translates to: PRIQPDHFRRHESLS*LKEGTNPPRKTLGG
Trigger: CCCACCCAGTGTCTTTCGAGGTGGGTTTGTACCTTCCTTAAGCCAGGAAAGGGATTCATGGCGTCGGAAATGATCTGGCTGAATCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR TCA 90 bp CATAAAGACGACAATGGCAGTTCTCGATATTCACGATCACGGCTTTaGAGTCCCGGTCAACCTGCCCCTCTCTGTCCCCGGCATTCATTG +
Preference number: 1 (lower is better)
Translates to: HKDDNGSSRYSRSRL*SPGQPAPLCPRHSL
Trigger: CAATGAATGCCGGGGACAGAGAGGGGCAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGTCGTCTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR GCA 90 bp TCGGGGGTGACAGGGCAAAGGCTAACCTGGCTGTCTAGCAAGGCTTaGATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTTTG +
Preference number: 1 (lower is better)
Translates to: SGVTGQRLTWLSSKA*IEEVNTLTPEFRGL
Trigger: CAAACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAGCCTTTGCCCTGTCACCCCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CCA 90 bp TCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATaGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATAT +
Preference number: 1 (lower is better)
Translates to: SRGKEETKIPTQAIA*ALSEACSASQMNKY
Trigger: ATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR TCA 90 bp TCCGGACATCAGTGCAACAGTAACACGGCGATTTCAGAAAGAACCTaGAGTCCCGTCAAACGATCCAGACTGGAGGATTTATTTATTTTT +
Preference number: 1 (lower is better)
Translates to: SGHQCNSNTAISERT*SPVKRSRLEDLFIF
Trigger: AAAAATAAATAAATCCTCCAGTCTGGATCGTTTGACGGGACTTCAGGTTCTTTCTGAAATCGCCGTGTTACTGTTGCACTGATGTCCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR TCA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGAGTCCCCGGCATTCATTaGCACGGGCTTTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LTEAVTVSPDISATVTRRVPGIH*HGLSLA
Trigger: GGCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGAC...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CCA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCTTCCTGGAGAGAAATaGAGGTGTCATCCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLLPGEK*RCHPGP
Trigger: GGGACCAGGATGACACCTCCATTTCTCTCCAGGAAG...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR TCA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCGCATCATTTGGTGAATaGGTTTGGTCTCGGTGCCAC +
Preference number: 2 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLASFGE*VWSRCH
Trigger: GTGGCACCGAGACCAAACTCATTCACCAAATGATGC...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CCA 90 bp TTGACACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACGACAGAAAATGGCTTAGAGATTGGTaGATGAGGCAGGGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: LTRAFPGLGSHPNTHDRKWLRDW*MRQGQG
Trigger: CCCCTGGCCCTGCCTCATCCACCAATCTCTAAGCCA...TTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CAA 90 bp AGGGTGACCAGTGACTCAGGCTCTGCCTCTGGGAAGTGGCATCATTaGGTGAATGAGTTTGGTCTCGGTGCCACCACGGATTCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: RVTSDSGSASGKWHH*VNEFGLGATTDSAR
Trigger: TCTGGCTGAATCCGTGGTGGCACCGAGACCAAACTCATTCACCAAATGATGCCACTTCCCAGAGGCAGAGCCTGAGTCACTGGTCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR TCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 2 (lower is better)
Translates to: GPGGPVGAICCCVLKATCGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR TCA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGACACTGGGTGGGTCATaGTTCGGGGGTGACAGGGCA +
Preference number: 2 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLTLGGS*FGGDRA
Trigger: TGCCCTGTCACCCCCGAATCATGACCCACCCAGTGT...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR TCA 90 bp ACTATCTGTACAGGGACGCATTTACGTGCTCCGAAACCAGAAAGGCTTATCACGGTCCCCGGCATTCATTaGCACGGGCTTTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: TICTGTHLRAPKPERLITVPGIH*HGLSLA
Trigger: GGCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGAC...CGTGATAAGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCTGTACAGATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR GCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACCCCGTTGGTGCCATCTaGTGTTGTGTGTTGAAAGCC +
Preference number: 2 (lower is better)
Translates to: SHCARPHRACFKHIPINDPVGAI*CCVLKA
Trigger: GGCTTTCAACACACAACAGCAGATGGCACCAACGGG...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CCA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTCCTGACAGCCACACCTaGGTGCAGGCCACGTGTCCT +
Preference number: 2 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRPDSHT*VQATCP
Trigger: AGGACACGTGGCCTGCACCCAGGTGTGGCTGTCAGG...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CCA 90 bp ACTATCTGTACAGGGACGCATTTACGTGCTCCGAAACCAGAAAGGCTTATCACGCCTGACAGCCACACCTaGGTGCAGGCCACGTGTCCT +
Preference number: 2 (lower is better)
Translates to: TICTGTHLRAPKPERLITPDSHT*VQATCP
Trigger: AGGACACGTGGCCTGCACCCAGGTGTGGCTGTCAGG...CGTGATAAGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCTGTACAGATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR TCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAAGAGGCCATGGGCTGCTaGTGCACCATGCATGGTTTT +
Preference number: 2 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTEEAMGC*CTMHGF
Trigger: AAAACCATGCATGGTGCATCAGCAGCCCATGGCCTC...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR GCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACGTGTTGAAAGCCACTTaGTTCTCTGGGCCTGACATC +
Preference number: 2 (lower is better)
Translates to: SHCARPHRACFKHIPINDVLKAT*FSGPDI
Trigger: GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACAC...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CCA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTAGGAGACCACGGGAATaGAAGTGGGTAGGGGTCGGG +
Preference number: 2 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRRRPRE*KWVGVG
Trigger: CCCGACCCCTACCCACTTCCATTCCCGTGGTCTCCT...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR TCA 90 bp CATACAACGGGGACATCATTCTCCCAAAAAGCGTTGCACACAGTCCAGTTCGTGACAGCCTCAAATGCCTaGGCTCAAACCATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: HTTGTSFSQKALHTVQFVTASNA*AQTILP
Trigger: TGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGT...CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR GCA 90 bp TCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTCCCAACCCAAGCCATTaGATGGGCACTGTCCGAAGC +
Preference number: 2 (lower is better)
Translates to: SSKACIEEVNTLTPEFRGPNPSH*MGTVRS
Trigger: GCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGG...ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR CCA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAGGGCAAAGGCTAACCTaGCTGTCTAGCAAGGCTTGC +
Preference number: 2 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKGQRLT*LSSKAC
Trigger: GCAAGCCTTGCTAGACAGCCAGGTTAGCCTTTGCCC...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACGATTGGGGAAGTGAATaGCTTGGAGGCATTTGCATA +
Preference number: 2 (lower is better)
Translates to: SHCARPHRACFKHIPINDDWGSE*LGGICI
Trigger: TATGCAAATGCCTCCAAGCCATTCACTTCCCCAATC...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR TCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 2 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR GCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTAGCTCTGGCAGGCAATaGTTTGGTCTTCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: ETKIPTQAIAWALSEACSSSGRQ*FGLLCL
Trigger: AAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCT...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR GCA 90 bp CATACAACGGGGACATCATTCTCCCAAAAAGCGTTGCACACAGTCCAGTTCGTGAGGGACGCATTTACGTaGTCCGAAACCAGAAAGGCT +
Preference number: 2 (lower is better)
Translates to: HTTGTSFSQKALHTVQFVRDAFT*SETRKA
Trigger: AGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCT...CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACAGGATTGTGTCACGGTaGAGAGAAACTCAAAACTTC +
Preference number: 2 (lower is better)
Translates to: SHCARPHRACFKHIPINDRIVSR*RETQNF
Trigger: GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCT...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAAACAGTGTTTTGTCCCTaGGGACAATTGCCAATCCCT +
Preference number: 2 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTETVFCP*GQLPIP
Trigger: AGGGATTGGCAATTGTCCCCAGGGACAAAACACTGT...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR TCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 2 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR TCA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAGCATCATTTGGTGAATaGGTTTGGTCTCGGTGCCAC +
Preference number: 2 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKASFGE*VWSRCH
Trigger: GTGGCACCGAGACCAAACTCATTCACCAAATGATGC...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR GCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAAGCTCTGGCAGGCAATaGTTTGGTCTTCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: PSRGKEETKIPTQAIAWASSGRQ*FGLLCL
Trigger: AAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCT...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR TCA 90 bp CGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 2 (lower is better)
Translates to: RACFSYPSRGKEETKIPTGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...GGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR GCA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAAGCTCTGGCAGGCAATaGTTTGGTCTTCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKSSGRQ*FGLLCL
Trigger: AAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCT...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR GCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTAGCTCTGGCAGGCAATaGTTTGGTCTTCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTSSGRQ*FGLLCL
Trigger: AAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCT...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR TCA 90 bp GGCCTGGGATCCCATCCCAACACACACGACAGAAAACAGTGCAAAATAATAACAAGTGGCATCATTTGGTaGATGAGTTTGGTCTCGGTG +
Preference number: 2 (lower is better)
Translates to: GLGSHPNTHDRKQCKIITSGIIW*MSLVSV
Trigger: CACCGAGACCAAACTCATTCACCAAATGATGCCACT...TGTTATTATTTTGCACTGTTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR TCA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGAGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 2 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR GCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCAGCTCTGGCAGGCAATaGTTTGGTCTTCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: CFSYPSRGKEETKIPTQASSGRQ*FGLLCL
Trigger: AAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCT...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR CCA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAATGGCAGGCAATGCTTTaGTCTTCTCTGTCTTTGAAT +
Preference number: 2 (lower is better)
Translates to: PGPVSLILHEERKKPKSQWQAML*SSLSLN
Trigger: ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCA...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR CCA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTTGGCAGGCAATGCTTTaGTCTTCTCTGTCTTTGAAT +
Preference number: 2 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPWQAML*SSLSLN
Trigger: ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCA...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGCAGGCAATGCTTTaGTCTTCTCTGTCTTTGAAT +
Preference number: 2 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAWQAML*SSLSLN
Trigger: ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATGGCAGGCAATGCTTTaGTCTTCTCTGTCTTTGAAT +
Preference number: 2 (lower is better)
Translates to: AWALSEACSASQMNKYIKWQAML*SSLSLN
Trigger: ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR CAA 90 bp AAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTaGCACACAGTCCAGTTCGTGCAAATAATCTTTGTACATAAAGAA +
Preference number: 2 (lower is better)
Translates to: KPLIHTTGTSFSQKA*HTVQFVQIIFVHKE
Trigger: TTCTTTATGTACAAAGATTATTTGCACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CCA 72 bp GGATGGGCACCAGGCTGGTGTCCTGACAGCCACACCTaGGTGCAGGCCACGTGTCCTCACGGCCAAGGTAAC +
Preference number: 3 (lower is better)
Translates to: GWAPGWCPDSHT*VQATCPHGQGN
Trigger: GTTACCTTGGCCGTGAGGACACGTGGCCTGCACCCAGGTGTGGCTGTCAGGACACCAGCCTGGTGCCCATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR TCA 72 bp CCGGTCAACCTGCCCCTCTCTGTCCCCGGCATTCATTaGCACGGGCTTTCCCTGGCCTGGGATCCCATCCCA +
Preference number: 3 (lower is better)
Translates to: PVNLPLSVPGIH*HGLSLAWDPIP
Trigger: TGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGACAGAGAGGGGCAGGTTGACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR GCA 72 bp CAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTaGAAGCTCCGCTTCCCGGGTTCACACCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: QTADCSGAISAH*KLRFPGSHHSP
Trigger: AGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR GCA 72 bp GATGAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTaGTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: DEAGPGGPVGAI*CCVLKATCFSG
Trigger: CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR TCA 72 bp CAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTaGAAGCCACTTGCTTCTCTGGGCCTGACATCCCCT +
Preference number: 3 (lower is better)
Translates to: QGVPLVPSAVVC*KPLASLGLTSP
Trigger: AGGGGATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR CAA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCCTGGCAGGCAATGCTTaGGTCTTCTCTGTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: EAGPGGPVGAICCCVLKALAGNA*VFSVFE
Trigger: TTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAG...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR TCA 72 bp GGTACAAACCCACCTCGAAAGACACTGGGTGGGTCATaGTTCGGGGGTGACAGGGCAAAGGCTAACCTGGCT +
Preference number: 3 (lower is better)
Translates to: GTNPPRKTLGGS*FGGDRAKANLA
Trigger: AGCCAGGTTAGCCTTTGCCCTGTCACCCCCGAATCATGACCCACCCAGTGTCTTTCGAGGTGGGTTTGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR TCA 72 bp GACAATGGCAGTTCTCGATATTCACGATCACGGCTTTaGAGTCCCGGTCAACCTGCCCCTCTCTGTCCCCGG +
Preference number: 3 (lower is better)
Translates to: DNGSSRYSRSRL*SPGQPAPLCPR
Trigger: CCGGGGACAGAGAGGGGCAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR GCA 72 bp ATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTaGCCCTCTCTGTCCCCGGCATTCATTGACACGGGC +
Preference number: 3 (lower is better)
Translates to: IFTITALKSRST*PSLSPAFIDTG
Trigger: GCCCGTGTCAATGAATGCCGGGGACAGAGAGGGGCAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CCA 72 bp TCTCTGTCCCCGGCATTCATTGACACGGGCTTTCCCTaGCCTGGGATCCCATCCCAACACACACGACAGAAA +
Preference number: 3 (lower is better)
Translates to: SLSPAFIDTGFP*PGIPSQHTRQK
Trigger: TTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR TCA 72 bp ATCTCGCTTTGTTGCTCAGGCCTGGTCTCCAACTCCTaGACTCAAGTGATCCAGCTCAGCCTCCCAAAGTGC +
Preference number: 3 (lower is better)
Translates to: ISLCCSGLVSNS*TQVIQLSLPKC
Trigger: GCACTTTGGGAGGCTGAGCTGGATCACTTGAGTTCAGGAGTTGGAGACCAGGCCTGAGCAACAAAGCGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CAA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTTGTCCCCGGCATTCATaGACACGGGCTTTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRCPRHS*TRAFPG
Trigger: GCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGACA...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CAA 90 bp TGGTCTCGGTGCCACCACGGATTCAGCCAGATCATTTCCGACGCCATGAATCCCATCTGCTGTTGTGTGTaGAAAGCCACTTGCTTCTCT +
Preference number: 3 (lower is better)
Translates to: WSRCHHGFSQIISDAMNPICCCV*KATCFS
Trigger: AGAGAAGCAAGTGGCTTTCAACACACAACAGCAGAT...GGGATTCATGGCGTCGGAAATGATCTGGCTGAATCCGTGGTGGCACCGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CAA 90 bp GGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCCTGACATCTGGTCTTCTCTGTCTTaGAATAAAACAAGGCCGGCG +
Preference number: 3 (lower is better)
Translates to: GAICCCVLKATCFSGPDIWSSLS*NKTRPA
Trigger: CGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACCA...GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR CCA 72 bp TCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTGTaGAAGAGAACCATATCCTCTGGGGACAGTAGGTTT +
Preference number: 3 (lower is better)
Translates to: SHQFTPLGWVRL*KRTISSGDSRF
Trigger: AAACCTACTGTCCCCAGAGGATATGGTTCTCTTCCACAACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559340.1
3UTR-3UTR CAA 90 bp ATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAACCATCCTCCCACCTGGTGCCATCTGCTGTaGTGTGTTGAAAGCCACTTG +
Preference number: 3 (lower is better)
Translates to: IIIAHDSLKCLSSNHPPTWCHLL*CVESHL
Trigger: CAAGTGGCTTTCAACACACAACAGCAGATGGCACCA...GGTGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CCA 72 bp GCTTGGAGGCATTTGCATAGAAGTGGAAGCACTAGGTaGGCGGACATAAAGACGACAATGGCAGTTCTCGAT +
Preference number: 3 (lower is better)
Translates to: AWRHLHRSGSTR*ADIKTTMAVLD
Trigger: ATCGAGAACTGCCATTGTCGTCTTTATGTCCGCCCACCTAGTGCTTCCACTTCTATGCAAATGCCTCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR GCA 72 bp ACAGGGCAAAGGCTAACCTGGCTGTCTAGCAAGGCTTaGATAGAAGAGGTAAACACGTTGACTCCTGAGTTT +
Preference number: 3 (lower is better)
Translates to: TGQRLTWLSSKA*IEEVNTLTPEF
Trigger: AAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAGCCTTTGCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR GCA 72 bp AAAAATCCCCACTATCTGTACAGGGACGCATTTACGTaGTCCGAAACCAGAAAGGCTTATCACGGTTCCCTG +
Preference number: 3 (lower is better)
Translates to: KNPHYLYRDAFT*SETRKAYHGSL
Trigger: CAGGGAACCGTGATAAGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCTGTACAGATAGTGGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CAA 90 bp CGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCTGGTCTTCTCTGTCTTaGAATAAAACAAGGCCGGCG +
Preference number: 3 (lower is better)
Translates to: RACFSYPSRGKEETKIPTWSSLS*NKTRPA
Trigger: CGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACCA...GGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR CAA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAGGGAAGTGGCATCATTaGGTGAATGAGTTTGGTCTC +
Preference number: 3 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKGKWHH*VNEFGL
Trigger: GAGACCAAACTCATTCACCAAATGATGCCACTTCCC...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR TCA 72 bp CAGTGCAACAGTAACACGGCGATTTCAGAAAGAACCTaGAGTCCCGTCAAACGATCCAGACTGGAGGATTTA +
Preference number: 3 (lower is better)
Translates to: QCNSNTAISERT*SPVKRSRLEDL
Trigger: TAAATCCTCCAGTCTGGATCGTTTGACGGGACTTCAGGTTCTTTCTGAAATCGCCGTGTTACTGTTGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR-3UTR CAA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGGTCTTCTCTGTCTTaGAATAAAACAAGGCCGGCG +
Preference number: 3 (lower is better)
Translates to: VSLILHEERKKPKSQPKPWSSLS*NKTRPA
Trigger: CGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACCA...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACTGGCAGGCAATGCTTaGGTCTTCTCTGTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: AWALSEACSASQMNKYIKLAGNA*VFSVFE
Trigger: TTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
3UTR CCA 72 bp ACACATACCCATCAACGACAAGATTGGGGAAGTGAATaGCTTGGAGGCATTTGCATAGAAGTGGAAGCACTA +
Preference number: 3 (lower is better)
Translates to: THTHQRQDWGSE*LGGICIEVEAL
Trigger: TAGTGCTTCCACTTCTATGCAAATGCCTCCAAGCCATTCACTTCCCCAATCTTGTCGTTGATGGGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR TCA 72 bp ATAACACAAATGCCAAATGTACACAGTGTACAACTCTaGACTGAGAAAGTGCAAGGAGACCACGGGAATGGA +
Preference number: 3 (lower is better)
Translates to: ITQMPNVHSVQL*TEKVQGDHGNG
Trigger: TCCATTCCCGTGGTCTCCTTGCACTTTCTCAGTTCAGAGTTGTACACTGTGTACATTTGGCATTTGTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGTGGCGGGACCACAGGTaGGCACCGGGCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMWRDHR*APGRRP
Trigger: AGGCCTCCTGCCCGGTGCTCACCTGTGGTCCCGCCA...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCGCTGGGCCACCAGCTaGAAGCCGTCGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMRWATS*KPSGHR
Trigger: CCTGTGCCCCGACGGCTTCCAGCTGGTGGCCCAGCG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCTATCTCCACCGTGGTaGGCCCAGGGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMLSPPW*AQGWPQ
Trigger: CTGGGGCCACCCCTGGGCTCACCACGGTGGAGATAG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCCTGGGAGCACGTCTTaGGGGGACAGCCTTGCTCGT +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMPGSTS*GDSLAR
Trigger: ACGAGCAAGGCTGTCCCCCCAAGACGTGCTCCCAGG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGAGCTCCTCATGTCCCTaGCCAGCAGCATGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMSSSCP*PAACRP
Trigger: CGGACGGCATGCTGCTGGCCAGGGACATGAGGAGCT...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCGCCGCTGTGACACTTaGACTTGTTGGGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMRRCDT*TCWVPR
Trigger: GCGAGGGACCCAACAAGTTCAAGTGTCACAGCGGCG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCCTCGTGCCGGTTGGTaGAGAAGAGGTAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMPRAGW*RRGRRW
Trigger: CCATCGCCTACCTCTTCTTCACCAACCGGCACGAGG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCCTATCTCCACCGTGGTaGGCCCAGGGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKALSPPW*AQGWPQ
Trigger: CTGGGGCCACCCCTGGGCTCACCACGGTGGAGATAG...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCCTGGCACTCAGCGCTaGCATCGCAGACCCACTTGT +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMPGTQR*HRRPTC
Trigger: ACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGACTGGCAGCCGCCATTaGTCAGGGTGGTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMTGSRH*SGWSSH
Trigger: GTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGT...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCACCACGATGGCCCTTaGCTTGGAGCCGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMHHDGP*LGAVLP
Trigger: AGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCAGGATCCACCACGATaGCCCTTGGCTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMQDPPR*PLAWSR
Trigger: ACGGCTCCAAGCCAAGGGCCATCGTGGTGGATCCTG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGGGAGGCACAGATACTaGCAGCCGCCATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMGRHRY*QPPLLR
Trigger: CCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGACACGGGCTTTCCCTaGCCTGGGATCCCATCCCAA +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMDTGFP*PGIPSQ
Trigger: TTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CAA 72 bp CCCGGTCAACCTGCCCCTCTCTGTCCCCGGCATTCATaGACACGGGCTTTCCCTGGCCTGGGATCCCATCCC +
Preference number: 4 (lower is better)
Translates to: PGQPAPLCPRHS*TRAFPGLGSHP
Trigger: GGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGACAGAGAGGGGCAGGTTGACCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCGCAGGAGGCCTCGTCTaGGCCGTCCAAGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: GPGGPVGAICCCVLKATCAGGLV*AVQAVP
Trigger: CGGGACTGCTTGGACGGCTCAGACGAGGCCTCCTGC...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGGTCGGGTGGTTGTGTaGTGTGTCCTTACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMGRVVV*CVLTAV
Trigger: CACAGCCGTAAGGACACAGCACACAACCACCCGACC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAGCCCCAGGGCCCCATaGTCGCAGCCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMSPRAP*SQPLPG
Trigger: GCCTGGCAGAGGCTGCGAGCATGGGGCCCTGGGGCT...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCCAGCCTCAGCCTCTGTaGGGCAGCTCCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKAQPQPL*GSSSCP
Trigger: GGGACATGAGGAGCTGCCTCACAGAGGCTGAGGCTG...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCGCTGAAGATCTCGGCTaGAGACCAAGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLAEDLG*RPRRGG
Trigger: CCCGCCCCTCCTTGGTCTGCAGCCGAGATCTTCAGC...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252444.9
CDS-3UTR GCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGACCCGGATCACGACCTaGTGTGTCCTAGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMTRITT*CVLAGN
Trigger: GTTTCCAGCTAGGACACAGCAGGTCGTGATCCGGGT...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGACAAGCACGTCTCCTaGGACTCATCAGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMDKHVS*DSSEPS
Trigger: GGATGGCTCTGATGAGTCCCAGGAGACGTGCTTGTC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGACGCTGGGCCACCAGCTaGAAGCCGTCGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LTEAVTVSPDISATVTRRRWATS*KPSGHR
Trigger: CCTGTGCCCCGACGGCTTCCAGCTGGTGGCCCAGCG...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGAGACGAGGAGCACGATaGGGAGGACAATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMRRGAR*GGQWTE
Trigger: CTCTGTCCATTGTCCTCCCCATCGTGCTCCTCGTCT...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCGGATGGGCACCAGGCTaGTGTCCTGACAGCCACACC +
Preference number: 4 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLGWAPG*CPDSHT
Trigger: GGTGTGGCTGTCAGGACACCAGCCTGGTGCCCATCC...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGCACGGCCCCCACAGCTaGAGTCCCCGGATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMHGPHS*SPRICR
Trigger: CCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCGTG...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACAGCCTTGCTCGTCTaGGCCGTTGTCGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKATALLV*AVVAVH
Trigger: GTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGT...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGTGGTCCCGCACTCTTTaGTGGGTTCATCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMWSRTL*WVHLTS
Trigger: ACTGGTCAGATGAACCCATCAAAGAGTGCGGGACCA...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCAGGTGTCGGGATCCTaGCACTCATCGATATCTTCG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMQVSGS*HSSISS
Trigger: CGAAGATATCGATGAGTGTCAGGATCCCGACACCTG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCTCTGTCAAGCTGGGTaGTGCAGATCATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMLCQAG*CRSFSG
Trigger: CCCAGAGAATGATCTGCAGCACCCAGCTTGACAGAG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCCCGCAACAGAGACAGTaGCCAGGACAGAGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKAPQQRQ*PGQSRS
Trigger: GGACCGACTCTGTCCTGGGCACTGTCTCTGTTGCGG...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGTCTTCTCATTTCCTCTaGCAGCAACGTCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMSSHFL*QQRRPE
Trigger: CTCTGGGCGACGTTGCTGGCAGAGGAAATGAGAAGA...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTAGCCCCAGGGCCCCATaGTCGCAGCCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPSPRAP*SQPLPG
Trigger: GCCTGGCAGAGGCTGCGAGCATGGGGCCCTGGGGCT...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCATCACAGCGCCAGCTaGAGTGGATGCACTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLHHSAS*SGCTRH
Trigger: GTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATG...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCCGTCAGGGCGACAGGTaGCCACAGCGCAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKARQGDR*PQRSFP
Trigger: AGGAAAACTGCGCTGTGGCCACCTGTCGCCCTGACG...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCCAGTTCACTCCTCTTaGCTGGGTGAGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMPVHSS*LGEVVE
Trigger: TTCCACAACCTCACCCAGCCAAGAGGAGTGAACTGG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGAGCCCTCACGCTACTaGGCTTCTTCTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMEPSRY*ASSHFL
Trigger: GAGGAAATGAGAAGAAGCCCAGTAGCGTGAGGGCTC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGGACCTCATCCTCTGTaGTCTTCTGATAGACGGGGT +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMGPHPL*SSDRRG
Trigger: ACCCCGTCTATCAGAAGACCACAGAGGATGAGGTCC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGATGCATTCGCCGCTGTaGCACTTGAACTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMMHSPL*HLNLLG
Trigger: ACCCAACAAGTTCAAGTGTCACAGCGGCGAATGCAT...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTCCTCAGGTTGGGGATaGGGCTGGTGTACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GPGGPVGAICCCVLKATCSSGWG*GWCTRS
Trigger: GGAGCGAGTACACCAGCCTCATCCCCAACCTGAGGA...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTCAGGCCCCCTTTCTTaGTCTTGGCGGGAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GPGGPVGAICCCVLKATCSGPLS*SWREFP
Trigger: GGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGA...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGCAGCCTCAGCCTCTGTaGGGCAGCTCCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMQPQPL*GSSSCP
Trigger: GGGACATGAGGAGCTGCCTCACAGAGGCTGAGGCTG...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCTATCTCCACCGTGGTaGGCCCAGGGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLLSPPW*AQGWPQ
Trigger: CTGGGGCCACCCCTGGGCTCACCACGGTGGAGATAG...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCCCCACAGCTGGGGGATaGAGGTGGAGCTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: GPGGPVGAICCCVLKATCPTAGG*RWSCCT
Trigger: AGTGCAACAGCTCCACCTGCATCCCCCAGCTGTGGG...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCGGTCGGGTGGTTGTGTaGTGTGTCCTTACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKAGRVVV*CVLTAV
Trigger: CACAGCCGTAAGGACACAGCACACAACCACCCGACC...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCTCGATCATGGCTCACTaGAACCTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKASIMAH*NLHLLG
Trigger: GCCCAGGAGGTGGAGGTTGCAGTGAGCCATGATCGA...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCTTGCCCAGGCTGGAGTaGAGTGGCTCGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKALPRLE*SGSIMA
Trigger: AGCCATGATCGAGCCACTGCACTCCAGCCTGGGCAA...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGGCTGGGTGAGGTTGTaGAAGAGAACCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMGWVRL*KRTISS
Trigger: AGAGGATATGGTTCTCTTCCACAACCTCACCCAGCC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCGATGGGGAGGACAATaGACAGAGCCCTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLRWGGQ*TEPSRY
Trigger: GTAGCGTGAGGGCTCTGTCCATTGTCCTCCCCATCG...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCGCAGTGGCTCGATCATaGCTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKAAVARS*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCATGATCGAGCCACTGC...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGCAAGCAGTCCCGGTCTaGGTCACAGACGAACTGCCG +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMQAVPV*VTDELP
Trigger: CGGCAGTTCGTCTGTGACTCAGACCGGGACTGCTTG...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGGCGGGACCACAGGTaGGCACCGGGCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFWRDHR*APGRRP
Trigger: AGGCCTCCTGCCCGGTGCTCACCTGTGGTCCCGCCA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGTGGCGGGACCACAGGTaGGCACCGGGCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LTSPPLSSSMFEDCVTVEWRDHR*APGRRP
Trigger: AGGCCTCCTGCCCGGTGCTCACCTGTGGTCCCGCCA...CTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGCGCCGCTGTGACACTTaGACTTGTTGGGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMRRCDT*TCWVPR
Trigger: GCGAGGGACCCAACAAGTTCAAGTGTCACAGCGGCG...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGTCCTCAGGTTGGGGATaGGGCTGGTGTACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMSSGWG*GWCTRS
Trigger: GGAGCGAGTACACCAGCCTCATCCCCAACCTGAGGA...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGATGCTTGAGATGGAGTaGAGTTTGGAGTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMMLEME*SLESTQ
Trigger: CTGGGTTGACTCCAAACTTCACTCCATCTCAAGCAT...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCATTAAGGGTGACCAGTaGCTCAGGCTCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKAIKGDQ*LRLCLW
Trigger: CCAGAGGCAGAGCCTGAGTCACTGGTCACCCTTAAT...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TGGTCTCGGTGCCACCACGGATTCAGCCAGATCATTTCCGACGCCATGAATCCCGTCCCCGGCATTCATTaGCACGGGCTTTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WSRCHHGFSQIISDAMNPVPGIH*HGLSLA
Trigger: GGCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGAC...GGGATTCATGGCGTCGGAAATGATCTGGCTGAATCCGTGGTGGCACCGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTCACGATCACGGCTTTaGAGTCCCGGTCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: GPGGPVGAICCCVLKATCSRSRL*SPGQPA
Trigger: GGCAGGTTGACCGGGACTTCAAAGCCGTGATCGTGA...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGTGCAGGTGGAGCTGTTaGACTGGAAGCTGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMCRWSC*TGSWRD
Trigger: GTCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCA...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCGCCAGCTGGAGTGGATaGACTCGCCACTTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GPGGPVGAICCCVLKATCASWSG*TRHLGS
Trigger: ACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGC...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTAGCCCCAGGGCCCCATaGTCGCAGCCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPSPRAP*SQPLPG
Trigger: GCCTGGCAGAGGCTGCGAGCATGGGGCCCTGGGGCT...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCTCGCAGGCCCACAGCTaGGGGATGCAGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLSQAHS*GMQVEL
Trigger: CAGCTCCACCTGCATCCCCCAGCTGTGGGCCTGCGA...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGTCTTCGCATCTTCGCTaGGCCACCAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMSSHLR*ATSWKP
Trigger: CGGCTTCCAGCTGGTGGCCCAGCGAAGATGCGAAGA...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGTTGCAGGCCTTCGTGTaGGGGTCCAGCTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMLQAFV*GSSWKP
Trigger: AGGCTTCCAGCTGGACCCCCACACGAAGGCCTGCAA...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTGAGCCCGTCGGGGGCCTaGATGTCTCTGCTGATGACG +
Preference number: 4 (lower is better)
Translates to: LLRVVLSHQFTPLGWVRLSPSGA*MSLLMT
Trigger: CGTCATCAGCAGAGACATCCAGGCCCCCGACGGGCT...CAACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGAGATGGAGTGAAGTTTaGAGTCAACCCAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMRWSEV*SQPSRG
Trigger: GCCTCTACTGGGTTGACTCCAAACTTCACTCCATCT...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGGGGAGGCACAGATACTaGCAGCCGCCATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMGRHRY*QPPLLR
Trigger: CCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCC...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCGGGCAAAGGCTAACCTaGCTGTCTAGCAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKAGQRLT*LSSKAC
Trigger: GCAAGCCTTGCTAGACAGCCAGGTTAGCCTTTGCCC...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
3UTR CAA 72 bp CCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTaGAAAGCCACTTGCTTCTCTGGGCCTGACATCCCC +
Preference number: 4 (lower is better)
Translates to: PGGPVGAICCCV*KATCFSGPDIP
Trigger: GGGGATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTCGCACCTCCAGAACTaGGGAATGCAGCGGTTGACA +
Preference number: 4 (lower is better)
Translates to: GPGGPVGAICCCVLKATCSHLQN*GMQRLT
Trigger: TGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGA...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGACCTCGTGCCGGTTGGTaGAGAAGAGGTAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: LTEAVTVSPDISATVTRRPRAGW*RRGRRW
Trigger: CCATCGCCTACCTCTTCTTCACCAACCGGCACGAGG...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp ACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTGGGCGAGTGGGGGTTaGTCTGCGGGGCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TWLSSKACIEEVNTLTPEWASGG*SAGQGG
Trigger: GCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCA...CTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCAGCCTCAGCCTCTGTaGGGCAGCTCCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPQPQPL*GSSSCP
Trigger: GGGACATGAGGAGCTGCCTCACAGAGGCTGAGGCTG...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCCTCTGTCAAGCTGGGTaGTGCAGATCATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKALCQAG*CRSFSG
Trigger: CCCAGAGAATGATCTGCAGCACCCAGCTTGACAGAG...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTGCCGCAACAGAGACAGTaGCCAGGACAGAGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LLRVVLSHQFTPLGWVRLPQQRQ*PGQSRS
Trigger: GGACCGACTCTGTCCTGGGCACTGTCTCTGTTGCGG...CAACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR GCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACGAGTGGGGGTTGATCTaGGGGGCAGGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: SHCARPHRACFKHIPINDEWGLI*GAGRHR
Trigger: TCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTC...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCGAGTGGGGGTTGATCTaGGGGGCAGGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLEWGLI*GAGRHR
Trigger: TCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTC...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCAGCCCGTCGGGGGCCTaGATGTCTCTGCTGATGACG +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLSPSGA*MSLLMT
Trigger: CGTCATCAGCAGAGACATCCAGGCCCCCGACGGGCT...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCAGCTCCTCATGTCCCTaGCCAGCAGCATGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLSSSCP*PAACRP
Trigger: CGGACGGCATGCTGCTGGCCAGGGACATGAGGAGCT...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCGGACCTCATCCTCTGTaGTCTTCTGATAGACGGGGT +
Preference number: 4 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLGPHPL*SSDRRG
Trigger: ACCCCGTCTATCAGAAGACCACAGAGGATGAGGTCC...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGAAGGAGACCACGGGAATaGAAGTGGGTAGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: LTEAVTVSPDISATVTRRRRPRE*KWVGVG
Trigger: CCCGACCCCTACCCACTTCCATTCCCGTGGTCTCCT...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCAGCCTCGCCATGCCTaGCCAGAGGCCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFQPRHA*PEAMGC
Trigger: GCAGCCCATGGCCTCTGGCCAGGCATGGCGAGGCTG...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCTGGGAGCACGTCTTaGGGGAGCACGTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCPGSTS*GSTSPG
Trigger: CCCAGGAGACGTGCTCCCCCAAGACGTGCTCCCAGG...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535915.5
CDS-3UTR TCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTGGGGCGGGGAGATTCTaGGGCAACGTTTCAACCTCG +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPGAGRF*GNVSTS
Trigger: CGAGGTTGAAACGTTGCCTCAGAATCTCCCCGCCCC...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252444.9
CDS-3UTR TCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCACGGCCCCCACAGCTaGAGTCCCCGGATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFHGPHS*SPRICR
Trigger: CCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCGTG...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGACAGCCTTGCTCGTCTaGGCCGTTGTCGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GPVGAICCCVLKATCFSGTALLV*AVVAVH
Trigger: GTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGT...CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAGCAGGAGGCCTCGTCTaGGCCGTCCAAGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAAGGLV*AVQAVP
Trigger: CGGGACTGCTTGGACGGCTCAGACGAGGCCTCCTGC...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCGCCGCTGTGACACTTaGACTTGTTGGGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSARRCDT*TCWVPR
Trigger: GCGAGGGACCCAACAAGTTCAAGTGTCACAGCGGCG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAGACTTTGTCCAGGGTaGTGCATTCGCCGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMRLCPG*CIRRCD
Trigger: GTCACAGCGGCGAATGCATCACCCTGGACAAAGTCT...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTTCAGGCCCCCTTTCTTaGTCTTGGCGGGAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: IAQGGPLTPVHSSWLGEVSGPLS*SWREFP
Trigger: GGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGA...AACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR TCA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGCTCCTCTTGGCTGGGTaGGGTTGTGGAAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRLLLAG*GCGREP
Trigger: TGGTTCTCTTCCACAACCTCACCCAGCCAAGAGGAG...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR TCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTGGGCGAGTGGGGGTTaGTCTGCGGGGCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTWASGG*SAGQGG
Trigger: GCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCA...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTATCTCCACCGTGGTaGGCCCAGGGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVLSPPW*AQGWPQ
Trigger: CTGGGGCCACCCCTGGGCTCACCACGGTGGAGATAG...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTGACACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACGACAGAAAAACACTGGGTGGGTCATaGTTCGGGGGTGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LTRAFPGLGSHPNTHDRKTLGGS*FGGDRA
Trigger: TGCCCTGTCACCCCCGAATCATGACCCACCCAGTGT...TTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCGTCCCCGGCATTCATTaGCACGGGCTTTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCVPGIH*HGLSLA
Trigger: GGCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGAC...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TTGACACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACGACAGAAAACCTGGCACTCAGCGCTaGCATCGCAGACCCACTTGT +
Preference number: 4 (lower is better)
Translates to: LTRAFPGLGSHPNTHDRKPGTQR*HRRPTC
Trigger: ACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGG...TTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCCTGGCACTCAGCGCTaGCATCGCAGACCCACTTGT +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAPGTQR*HRRPTC
Trigger: ACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCTGGCACTCAGCGCTaGCATCGCAGACCCACTTGT +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPPGTQR*HRRPTC
Trigger: ACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGG...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTGACACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACGACAGAAAACCCACAGCTGGGGGATaGAGGTGGAGCTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: LTRAFPGLGSHPNTHDRKPTAGG*RWSCCT
Trigger: AGTGCAACAGCTCCACCTGCATCCCCCAGCTGTGGG...TTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGATATTCCCGGTCACACTaGCGGCTGCCATGGATGCAG +
Preference number: 4 (lower is better)
Translates to: LTEAVTVSPDISATVTRRYSRSH*RLPWMQ
Trigger: CTGCATCCATGGCAGCCGGCAGTGTGACCGGGAATA...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCACCAGTAGATTCTATTaGTGGCCACCTCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLTSRFY*WPPPCP
Trigger: TGGACACGGAGGTGGCCAGCAATAGAATCTACTGGT...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TTGACACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACGACAGAAAACCGCAACAGAGACAGTaGCCAGGACAGAGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LTRAFPGLGSHPNTHDRKPQQRQ*PGQSRS
Trigger: GGACCGACTCTGTCCTGGGCACTGTCTCTGTTGCGG...TTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTACTGGCAGCCGCCATTaGTCAGGGTGGTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPTGSRH*SGWSSH
Trigger: GTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGT...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCGAGTGGGGGTTGATCTaGGGGGCAGGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCEWGLI*GAGRHR
Trigger: TCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTC...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCACCTCAGCCTCGCCATaGCTGGCCAGAGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFTSASP*LARGHG
Trigger: CCCATGGCCTCTGGCCAGGCATGGCGAGGCTGAGGT...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TGGTCTCGGTGCCACCACGGATTCAGCCAGATCATTTCCGACGCCATGAATCCCTCGATCATGGCTCACTaGAACCTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WSRCHHGFSQIISDAMNPSIMAH*NLHLLG
Trigger: GCCCAGGAGGTGGAGGTTGCAGTGAGCCATGATCGA...GGGATTCATGGCGTCGGAAATGATCTGGCTGAATCCGTGGTGGCACCGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCTCGCAGGCCCACAGCTaGGGGATGCAGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSSQAHS*GMQVEL
Trigger: CAGCTCCACCTGCATCCCCCAGCTGTGGGCCTGCGA...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCAGCGCCAGCTGGAGTaGATGCACTCGCCACTTAGG +
Preference number: 4 (lower is better)
Translates to: GPVGAICCCVLKATCFSGQRQLE*MHSPLR
Trigger: CCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTG...CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTCGCTGGGCCACCAGCTaGAAGCCGTCGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTRWATS*KPSGHR
Trigger: CCTGTGCCCCGACGGCTTCCAGCTGGTGGCCCAGCG...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCAGGTTCACGCAGAGCTaGCTGCAGGTGTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLRFTQS*LQVSGS
Trigger: GGATCCCGACACCTGCAGCCAGCTCTGCGTGAACCT...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCACCACGATGGCCCTTaGCTTGGAGCCGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAHHDGP*LGAVLP
Trigger: AGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACCACCACGATGGCCCTTaGCTTGGAGCCGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SHCARPHRACFKHIPINDHHDGP*LGAVLP
Trigger: AGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTG...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTCACCACGATGGCCCTTaGCTTGGAGCCGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: IAQGGPLTPVHSSWLGEVHHDGP*LGAVLP
Trigger: AGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTG...AACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCAGGATCCACCACGATaGCCCTTGGCTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAQDPPR*PLAWSR
Trigger: ACGGCTCCAAGCCAAGGGCCATCGTGGTGGATCCTG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTCAGGATCCACCACGATaGCCCTTGGCTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: IAQGGPLTPVHSSWLGEVQDPPR*PLAWSR
Trigger: ACGGCTCCAAGCCAAGGGCCATCGTGGTGGATCCTG...AACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CCA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCATCGATGCTTGAGATaGAGTGAAGTTTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMHRCLR*SEVWSQ
Trigger: TTGACTCCAAACTTCACTCCATCTCAAGCATCGATG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCGCCAGGGGGTCCCGTTaGTGCCATCTGCTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLARGSR*CHLLLC
Trigger: ACACAACAGCAGATGGCACCAACGGGACCCCCTGGC...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTGACACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACGACAGAAAAGGGCTTTCCCTGGCCTaGGATCCCATCCCAACACAC +
Preference number: 4 (lower is better)
Translates to: LTRAFPGLGSHPNTHDRKGLSLA*DPIPTH
Trigger: GTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCC...TTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCGACACGGGCTTTCCCTaGCCTGGGATCCCATCCCAA +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSADTGFP*PGIPSQ
Trigger: TTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTC...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGTCGCCCACGTGGCTaGAGATCTCGGCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFCRPRG*RSRLQT
Trigger: GGTCTGCAGCCGAGATCTTCAGCCACGTGGGCGACA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252444.9
CDS-3UTR TCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACACGGCCCCCACAGCTaGAGTCCCCGGATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAHGPHS*SPRICR
Trigger: CCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCGTG...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCATGCCATTGGGCCACTaGATGTTTTCAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: GPGGPVGAICCCVLKATCMPLGH*MFSVTS
Trigger: GCTGGTGACTGAAAACATTCAGTGGCCCAATGGCAT...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCAGTGGCATCATTTGGTaGATGAGTTTGGTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLSGIIW*MSLVSV
Trigger: CACCGAGACCAAACTCATTCACCAAATGATGCCACT...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCCCCGAGAATAGTCACTaGACAAATACAGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: EAGPGGPVGAICCCVLKAPENSH*TNTATR
Trigger: CCTGGTTGCTGTATTTGTTCAGTGACTATTCTCGGG...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTAGACCCCTACAGCGCTaGGGCCACTCATCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPRPLQR*GHSSEP
Trigger: TGGCTCGGATGAGTGGCCGCAGCGCTGTAGGGGTCT...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCGCCAGCTGGAGTGGATaGACTCGCCACTTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAASWSG*TRHLGS
Trigger: ACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGC...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCTATTCCCGGTCACACTaGCGGCTGCCATGGATGCAG +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLYSRSH*RLPWMQ
Trigger: CTGCATCCATGGCAGCCGGCAGTGTGACCGGGAATA...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGCTCTGTCAAGCTGGGTaGTGCAGATCATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMLCQAG*CRSFSG
Trigger: CCCAGAGAATGATCTGCAGCACCCAGCTTGACAGAG...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCACTGGCAGCCGCCATTaGTCAGGGTGGTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCTGSRH*SGWSSH
Trigger: GTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGT...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGAGTGGGGGTTGATCTaGGGGGCAGGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPEWGLI*GAGRHR
Trigger: TCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTC...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCGGTCGGGTGGTTGTGTaGTGTGTCCTTACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAGRVVV*CVLTAV
Trigger: CACAGCCGTAAGGACACAGCACACAACCACCCGACC...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGGGTCGGGTGGTTGTGTaGTGTGTCCTTACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GPVGAICCCVLKATCFSGGRVVV*CVLTAV
Trigger: CACAGCCGTAAGGACACAGCACACAACCACCCGACC...CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAACCCAAGCCATTaGATGGGCACTGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPPNPSH*MGTVRS
Trigger: GCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGG...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCCCAACCCAAGCCATTaGATGGGCACTGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAPNPSH*MGTVRS
Trigger: GCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAACCATCCTCCCACCACCTCAGCCTCGCCATaGCTGGCCAGAGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: IIIAHDSLKCLSSNHPPTTSASP*LARGHG
Trigger: CCCATGGCCTCTGGCCAGGCATGGCGAGGCTGAGGT...GGTGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCATGCTCGCAGCCTCTaGCAGGCAGTGTCCCGACCC +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVHARSL*QAVSRP
Trigger: GGGTCGGGACACTGCCTGGCAGAGGCTGCGAGCATG...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCTCATCAGAGCCATCCTaGCACTCAGCGCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLSSEPS*HSALPS
Trigger: CGATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGA...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGTCGCAGGCCCACAGCTaGGGGATGCAGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLSQAHS*GMQVEL
Trigger: CAGCTCCACCTGCATCCCCCAGCTGTGGGCCTGCGA...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACTCGCCACTTAGGCAGTaGAACTCGAAGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: SHCARPHRACFKHIPINDSPLRQ*NSKAEQ
Trigger: CTGCTCGGCCTTCGAGTTCCACTGCCTAAGTGGCGA...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCAGCCCGTCGGGGGCCTaGATGTCTCTGCTGATGACG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFSPSGA*MSLLMT
Trigger: CGTCATCAGCAGAGACATCCAGGCCCCCGACGGGCT...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCAGCCCGTCGGGGGCCTaGATGTCTCTGCTGATGACG +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSSPSGA*MSLLMT
Trigger: CGTCATCAGCAGAGACATCCAGGCCCCCGACGGGCT...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTCCTCTTCACGCCCTTaGTATCCGCAACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRSSSRP*YPQQRQ
Trigger: CTGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGA...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGTTTCATCCTCCAAGATaGTCTTCCGGTTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMFHPPR*SSGCPR
Trigger: ACGGGGGCAACCGGAAGACCATCTTGGAGGATGAAA...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTGTAAACTTGGGCGAGTaGGGGTTGATCTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPVNLGE*GLICGA
Trigger: TGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTAC...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTTGGCTTAGAGATTGGTaGATGAGGCAGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPWLRDW*MRQGQG
Trigger: CCCCTGGCCCTGCCTCATCCACCAATCTCTAAGCCA...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGGTTTGGCTTAGAGATTaGTGGATGAGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMVWLRD*WMRQGQ
Trigger: CTGGCCCTGCCTCATCCACCAATCTCTAAGCCAAAC...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAACCTGACAGCCACACCTaGGTGCAGGCCACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTEPDSHT*VQATCP
Trigger: AGGACACGTGGCCTGCACCCAGGTGTGGCTGTCAGG...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAAGGATGGGCACCAGGCTaGTGTCCTGACAGCCACACC +
Preference number: 4 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTEGWAPG*CPDSHT
Trigger: GGTGTGGCTGTCAGGACACCAGCCTGGTGCCCATCC...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CAA 72 bp CGACAATGGCAGTTCTCGATATTCACGATCACGGCTTaGAAGTCCCGGTCAACCTGCCCCTCTCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RQWQFSIFTITA*KSRSTCPSLSP
Trigger: CGGGGACAGAGAGGGGCAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAACAAGCAGTCCCGGTCTaGGTCACAGACGAACTGCCG +
Preference number: 4 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTEQAVPV*VTDELP
Trigger: CGGCAGTTCGTCTGTGACTCAGACCGGGACTGCTTG...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCTGGCGGGACCACAGGTaGGCACCGGGCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAWRDHR*APGRRP
Trigger: AGGCCTCCTGCCCGGTGCTCACCTGTGGTCCCGCCA...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTCGCCGCTGTGACACTTaGACTTGTTGGGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSRRCDT*TCWVPR
Trigger: GCGAGGGACCCAACAAGTTCAAGTGTCACAGCGGCG...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCAGACTTTGTCCAGGGTaGTGCATTCGCCGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSARLCPG*CIRRCD
Trigger: GTCACAGCGGCGAATGCATCACCCTGGACAAAGTCT...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGATTTGATGGGTTCATCTaGCCAGTCCCGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LTEAVTVSPDISATVTRRFDGFI*PVPAVS
Trigger: AGAGACTGCCGGGACTGGTCAGATGAACCCATCAAA...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGATGGTCCCGCACTCTTTaGTGGGTTCATCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: LTEAVTVSPDISATVTRRWSRTL*WVHLTS
Trigger: ACTGGTCAGATGAACCCATCAAAGAGTGCGGGACCA...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TGGTCTCGGTGCCACCACGGATTCAGCCAGATCATTTCCGACGCCATGAATCCCCAGGTGTCGGGATCCTaGCACTCATCGATATCTTCG +
Preference number: 4 (lower is better)
Translates to: WSRCHHGFSQIISDAMNPQVSGS*HSSISS
Trigger: CGAAGATATCGATGAGTGTCAGGATCCCGACACCTG...GGGATTCATGGCGTCGGAAATGATCTGGCTGAATCCGTGGTGGCACCGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCCTCGTGCCGGTTGGTaGAGAAGAGGTAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFPRAGW*RRGRRW
Trigger: CCATCGCCTACCTCTTCTTCACCAACCGGCACGAGG...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTCCTCGTGCCGGTTGGTaGAGAAGAGGTAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPPRAGW*RRGRRW
Trigger: CCATCGCCTACCTCTTCTTCACCAACCGGCACGAGG...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGCAGTACATGAAGCCATaGACAGGATCCACCACGATG +
Preference number: 4 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRQYMKP*TGSTTM
Trigger: CATCGTGGTGGATCCTGTTCATGGCTTCATGTACTG...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR TCA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGATGCCATTGGGCCACTaGATGTTTTCAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRMPLGH*MFSVTS
Trigger: GCTGGTGACTGAAAACATTCAGTGGCCCAATGGCAT...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR TCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGGGCGAGTGGGGGTTaGTCTGCGGGGCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPWASGG*SAGQGG
Trigger: GCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCA...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACATTAAGGGTGACCAGTaGCTCAGGCTCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SHCARPHRACFKHIPINDIKGDQ*LRLCLW
Trigger: CCAGAGGCAGAGCCTGAGTCACTGGTCACCCTTAAT...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTACTTTGTCCTAGGGTaGTGCCATTGGGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRYFVLG*CHWATE
Trigger: TTCAGTGGCCCAATGGCATCACCCTAGGACAAAGTA...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR GCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTCCTGGCACTCAGCGCTaGCATCGCAGACCCACTTGT +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSPGTQR*HRRPTC
Trigger: ACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGG...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTTGCAGGTGGAGCTGTTaGACTGGAAGCTGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPCRWSC*TGSWRD
Trigger: GTCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCA...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAAGACCCCTACAGCGCTaGGGCCACTCATCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWARPLQR*GHSSEP
Trigger: TGGCTCGGATGAGTGGCCGCAGCGCTGTAGGGGTCT...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCGCCGGCTGCCATGGATaGAGTTTCCATCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLAGCHG*SFHQST
Trigger: AGTGCTCTGATGGAAACTGCATCCATGGCAGCCGGC...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGCATCGCTCATGTCCTTaGAGTCATATTCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMHRSCP*SHIPGH
Trigger: GTGACCGGGAATATGACTGCAAGGACATGAGCGATG...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCATGGAGCCCACAGCCTTaGAGGCCTTCGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAWSPQP*RPSCGG
Trigger: ACCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCA...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTGCTCTGTCAAGCTGGGTaGTGCAGATCATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLRVVLSHQFTPLGWVRLLCQAG*CRSFSG
Trigger: CCCAGAGAATGATCTGCAGCACCCAGCTTGACAGAG...CAACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR GCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAAGCCCCAGGGCCCCATaGTCGCAGCCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQSPRAP*SQPLPG
Trigger: GCCTGGCAGAGGCTGCGAGCATGGGGCCCTGGGGCT...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGGACAAGCACGTCTCCTaGGACTCATCAGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: GPVGAICCCVLKATCFSGDKHVS*DSSEPS
Trigger: GGATGGCTCTGATGAGTCCCAGGAGACGTGCTTGTC...CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGTTTCCATCAGAGCACTaGAATTCGTCAGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMFPSEH*NSSGRQ
Trigger: CTGTCGCCCTGACGAATTCCAGTGCTCTGATGGAAA...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCGCTGGGCCACCAGCTaGAAGCCGTCGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHRWATS*KPSGHR
Trigger: CCTGTGCCCCGACGGCTTCCAGCTGGTGGCCCAGCG...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTCTTCGCATCTTCGCTaGGCCACCAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFSSHLR*ATSWKP
Trigger: CGGCTTCCAGCTGGTGGCCCAGCGAAGATGCGAAGA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAATCTTCGCATCTTCGCTaGGCCACCAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTESSHLR*ATSWKP
Trigger: CGGCTTCCAGCTGGTGGCCCAGCGAAGATGCGAAGA...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTAGGTTCACGCAGAGCTaGCTGCAGGTGTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPRFTQS*LQVSGS
Trigger: GGATCCCGACACCTGCAGCCAGCTCTGCGTGAACCT...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTAGGTTCACGCAGAGCTaGCTGCAGGTGTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSRFTQS*LQVSGS
Trigger: GGATCCCGACACCTGCAGCCAGCTCTGCGTGAACCT...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTTGCAGGCCTTCGTGTaGGGGTCCAGCTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFLQAFV*GSSWKP
Trigger: AGGCTTCCAGCTGGACCCCCACACGAAGGCCTGCAA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAACACCACGATGGCCCTTaGCTTGGAGCCGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTEHHDGP*LGAVLP
Trigger: AGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTG...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCAGGATCCACCACGATaGCCCTTGGCTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFQDPPR*PLAWSR
Trigger: ACGGCTCCAAGCCAAGGGCCATCGTGGTGGATCCTG...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCAGATGGAGTGAAGTTTaGAGTCAACCCAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GPGGPVGAICCCVLKATCRWSEV*SQPSRG
Trigger: GCCTCTACTGGGTTGACTCCAAACTTCACTCCATCT...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCCTGACATCGTAAACTTGGGCGAGTaGGGGTTGATCTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GAICCCVLKATCFSGPDIVNLGE*GLICGA
Trigger: TGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTAC...GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CATACAACGGGGACATCATTCTCCCAAAAAGCGTTGCACACAGTCCAGTTCGTGAGCTCCTCATGTCCCTaGCCAGCAGCATGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: HTTGTSFSQKALHTVQFVSSSCP*PAACRP
Trigger: CGGACGGCATGCTGCTGGCCAGGGACATGAGGAGCT...CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCGGGAACAGGTCGGGTaGTTGTGTGCTGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAREQVG*LCAVSL
Trigger: TAAGGACACAGCACACAACCACCCGACCTGTTCCCG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGACCCAAGCCATTGCATaGGCACTGTCCGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GPVGAICCCVLKATCFSGTQAIA*ALSEAC
Trigger: ACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGT...CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAACCATCCTCCCACCCCTGACAGCCACACCTaGGTGCAGGCCACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: IIIAHDSLKCLSSNHPPTPDSHT*VQATCP
Trigger: AGGACACGTGGCCTGCACCCAGGTGTGGCTGTCAGG...GGTGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCAGCGAAACTCGTCCTaGGAGCACGTCTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFQRNSS*EHVLGE
Trigger: CTCCCCCAAGACGTGCTCCCAGGACGAGTTTCGCTG...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535915.5
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCAGCCTCAGCCTCTCTTaGCTGGGTGAGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLSLSLS*LGEVVE
Trigger: TTCCACAACCTCACCCAGCCAAGAGAGGCTGAGGCT...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545707.5
CDS-3UTR TCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAACAGCCTTGCTCGTCTaGGCCGTTGTCGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWATALLV*AVVAVH
Trigger: GTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGT...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTTTTGATGGGTTCATCTaGCCAGTCCCGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPFDGFI*PVPAVS
Trigger: AGAGACTGCCGGGACTGGTCAGATGAACCCATCAAA...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGACCTCGTGCCGGTTGGTaGAGAAGAGGTAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERPRAGW*RRGRRW
Trigger: CCATCGCCTACCTCTTCTTCACCAACCGGCACGAGG...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAACCATCCTCCCACCTCCTCAGGTTGGGGATaGGGCTGGTGTACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: IIIAHDSLKCLSSNHPPTSSGWG*GWCTRS
Trigger: GGAGCGAGTACACCAGCCTCATCCCCAACCTGAGGA...GGTGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCATCCTCAGGTTGGGGATaGGGCTGGTGTACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWASSGWG*GWCTRS
Trigger: GGAGCGAGTACACCAGCCTCATCCCCAACCTGAGGA...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTGGAGCCGTTCTCCCTaGATAACGTTTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRWSRSP*ITFSSS
Trigger: TGAAGAGGAAAACGTTATTCAGGGAGAACGGCTCCA...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR TCA 90 bp TGGTCTCGGTGCCACCACGGATTCAGCCAGATCATTTCCGACGCCATGAATCCCATGCCATTGGGCCACTaGATGTTTTCAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: WSRCHHGFSQIISDAMNPMPLGH*MFSVTS
Trigger: GCTGGTGACTGAAAACATTCAGTGGCCCAATGGCAT...GGGATTCATGGCGTCGGAAATGATCTGGCTGAATCCGTGGTGGCACCGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTCCGGTTGCCCCCGTTaGCATCGATGCTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFSGCPR*HRCLRW
Trigger: CCATCTCAAGCATCGATGTCAACGGGGGCAACCGGA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCTCTTGGCTGGGTaGGGTTGTGGAAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCLLLAG*GCGREP
Trigger: TGGTTCTCTTCCACAACCTCACCCAGCCAAGAGGAG...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCACTATCTCCACCGTGGTaGGCCCAGGGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPLSPPW*AQGWPQ
Trigger: CTGGGGCCACCCCTGGGCTCACCACGGTGGAGATAG...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAACACTGGGTGGGTCATaGTTCGGGGGTGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERTLGGS*FGGDRA
Trigger: TGCCCTGTCACCCCCGAATCATGACCCACCCAGTGT...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGAGCATCATTTGGTGAATaGGTTTGGTCTCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LTEAVTVSPDISATVTRRASFGE*VWSRCH
Trigger: GTGGCACCGAGACCAAACTCATTCACCAAATGATGC...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCGAGGCCATGGGCTGCTaGTGCACCATGCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCEAMGC*CTMHGF
Trigger: AAAACCATGCATGGTGCATCAGCAGCCCATGGCCTC...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGATTGCCAATCCCTTGTaGCATCTTCACGCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GPVGAICCCVLKATCFSGIANPL*HLHAGV
Trigger: GACTCCCGCGTGAAGATGTCACAAGGGATTGGCAAT...CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACATTGCCAATCCCTTGTaGCATCTTCACGCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SHCARPHRACFKHIPINDIANPL*HLHAGV
Trigger: GACTCCCGCGTGAAGATGTCACAAGGGATTGGCAAT...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCTCTCTTGGCTGGGTaGGGTTGTGGAAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCPLLAG*GCGREP
Trigger: TGGTTCTCTTCCACAACCTCACCCAGCCAAGAGAGG...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545707.5
CDS-3UTR GCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTCGAACTGCCGAGAGATaGACTTCCCATCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSRTAER*TSHRGS
Trigger: GCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCG...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCCGAACTGCCGAGAGATaGACTTCCCATCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSRTAER*TSHRGS
Trigger: GCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCG...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CATACAACGGGGACATCATTCTCCCAAAAAGCGTTGCACACAGTCCAGTTCGTGTGCAGGTGGAGCTGTTaGACTGGAAGCTGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: HTTGTSFSQKALHTVQFVCRWSC*TGSWRD
Trigger: GTCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCA...CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCCACAGCTGGGGGATaGAGGTGGAGCTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVPTAGG*RWSCCT
Trigger: AGTGCAACAGCTCCACCTGCATCCCCCAGCTGTGGG...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTTATTCCCGGTCACACTaGCGGCTGCCATGGATGCAG +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSYSRSH*RLPWMQ
Trigger: CTGCATCCATGGCAGCCGGCAGTGTGACCGGGAATA...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCTCTGTCAAGCTGGGTaGTGCAGATCATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLLCQAG*CRSFSG
Trigger: CCCAGAGAATGATCTGCAGCACCCAGCTTGACAGAG...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGACCGCAACAGAGACAGTaGCCAGGACAGAGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERPQQRQ*PGQSRS
Trigger: GGACCGACTCTGTCCTGGGCACTGTCTCTGTTGCGG...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACCGCAACAGAGACAGTaGCCAGGACAGAGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAPQQRQ*PGQSRS
Trigger: GGACCGACTCTGTCCTGGGCACTGTCTCTGTTGCGG...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTCCCAACCCAAGCCATTaGATGGGCACTGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPPNPSH*MGTVRS
Trigger: GCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGG...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCCGTTGGTGCCATCTaGTGTTGTGTGTTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLPVGAI*CCVLKA
Trigger: GGCTTTCAACACACAACAGCAGATGGCACCAACGGG...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTACAGCCACACCTGGGTaGAGGCCACGTGTCCTCACG +
Preference number: 4 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRTATPG*RPRVLT
Trigger: CGTGAGGACACGTGGCCTGCACCCAGGTGTGGCTGT...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTAAGTCCCGGTCAACCTaGCCCTCTCTGTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPKSRST*PSLSPA
Trigger: TGCCGGGGACAGAGAGGGGCAGGTTGACCGGGACTT...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAAAGTCCCGGTCAACCTaGCCCTCTCTGTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKKSRST*PSLSPA
Trigger: TGCCGGGGACAGAGAGGGGCAGGTTGACCGGGACTT...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TGGTCTCGGTGCCACCACGGATTCAGCCAGATCATTTCCGACGCCATGAATCCCAGGGACGCATTTACGTaGTCCGAAACCAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: WSRCHHGFSQIISDAMNPRDAFT*SETRKA
Trigger: AGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCT...GGGATTCATGGCGTCGGAAATGATCTGGCTGAATCCGTGGTGGCACCGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACTCCTGGGTGGCCACTaGAGCCTCAGCCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PGPVSLILHEERKKPKSQLLGGH*SLSLSW
Trigger: CCAAGAGAGGCTGAGGCTGCAGTGGCCACCCAGGAG...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545707.5
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGAACTTGATCGGGGCTaGTGGGGCGAGGGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHELDRG*WGEGAP
Trigger: GGGGGCGCCCTCGCCCCACCAGCCCCGATCAAGTTC...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252444.9
CDS-3UTR CCA 90 bp GGCCTGGGATCCCATCCCAACACACACGACAGAAAACAGTGCAAAATAATAACATCGCAGGCCCACAGCTaGGGGATGCAGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLGSHPNTHDRKQCKIITSQAHS*GMQVEL
Trigger: CAGCTCCACCTGCATCCCCCAGCTGTGGGCCTGCGA...TGTTATTATTTTGCACTGTTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTCGCCACTTAGGCAGTaGAACTCGAAGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFSPLRQ*NSKAEQ
Trigger: CTGCTCGGCCTTCGAGTTCCACTGCCTAAGTGGCGA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGCATCACAGCGCCAGCTaGAGTGGATGCACTCGCCAC +
Preference number: 4 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLHHSAS*SGCTRH
Trigger: GTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATG...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATCGCTGGGCCACCAGCTaGAAGCCGTCGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHRWATS*KPSGHR
Trigger: CCTGTGCCCCGACGGCTTCCAGCTGGTGGCCCAGCG...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTAGGTTCACGCAGAGCTaGCTGCAGGTGTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVRFTQS*LQVSGS
Trigger: GGATCCCGACACCTGCAGCCAGCTCTGCGTGAACCT...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCAGAAGAGGTAGGCGATaGAGCCCACAGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSRRGRR*SPQPCR
Trigger: CCTGCAAGGCTGTGGGCTCCATCGCCTACCTCTTCT...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTGAGTAGATTCTATTGCTaGCCACCTCCGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLRVVLSHQFTPLGWVRLSRFYC*PPPCPE
Trigger: CTCTGGACACGGAGGTGGCCAGCAATAGAATCTACT...CAACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CCA 90 bp ATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTTGGGCTCTGTCAAGCTaGGTGCTGCAGATCATTCTC +
Preference number: 4 (lower is better)
Translates to: IAQGGPLTPVHSSWLGEVWALSS*VLQIIL
Trigger: GAGAATGATCTGCAGCACCCAGCTTGACAGAGCCCA...AACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CCA 90 bp CGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCAGCCCGTCGGGGGCCTaGATGTCTCTGCTGATGACG +
Preference number: 4 (lower is better)
Translates to: RACFSYPSRGKEETKIPTSPSGA*MSLLMT
Trigger: CGTCATCAGCAGAGACATCCAGGCCCCCGACGGGCT...GGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCTCCTCTTCACGCCCTTaGTATCCGCAACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLSSSRP*YPQQRQ
Trigger: CTGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGA...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGTTTCATCCTCCAAGATaGTCTTCCGGTTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: GPVGAICCCVLKATCFSGFHPPR*SSGCPR
Trigger: ACGGGGGCAACCGGAAGACCATCTTGGAGGATGAAA...CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTGGGCTGGGTGAGGTTGTaGAAGAGAACCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: LLRVVLSHQFTPLGWVRLGWVRL*KRTISS
Trigger: AGAGGATATGGTTCTCTTCCACAACCTCACCCAGCC...CAACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCCAGTTCACTCCTCTTaGCTGGGTGAGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAPVHSS*LGEVVE
Trigger: TTCCACAACCTCACCCAGCCAAGAGGAGTGAACTGG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTCCAGTTCACTCCTCTTaGCTGGGTGAGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: IAQGGPLTPVHSSWLGEVPVHSS*LGEVVE
Trigger: TTCCACAACCTCACCCAGCCAAGAGGAGTGAACTGG...AACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAGGGAGGCACAGATACTaGCAGCCGCCATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAGRHRY*QPPLLR
Trigger: CCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCC...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCGGGAACAGGTCGGGTaGTTGTGTGCTGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCREQVG*LCAVSL
Trigger: TAAGGACACAGCACACAACCACCCGACCTGTTCCCG...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGGCCAGGGGGTCCCGTTaGTGCCATCTGCTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLARGSR*CHLLLC
Trigger: ACACAACAGCAGATGGCACCAACGGGACCCCCTGGC...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGGCTTAGAGATTGGTaGATGAGGCAGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFWLRDW*MRQGQG
Trigger: CCCCTGGCCCTGCCTCATCCACCAATCTCTAAGCCA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCACAGCCTCGCCATGCCTaGCCAGAGGCCATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPQPRHA*PEAMGC
Trigger: GCAGCCCATGGCCTCTGGCCAGGCATGGCGAGGCTG...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACACGGCCCCCACAGCTaGAGTCCCCGGATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKHGPHS*SPRICR
Trigger: CCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCGTG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAGGAGGCCTCGTCTaGGCCGTCCAAGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIAGGLV*AVQAVP
Trigger: CGGGACTGCTTGGACGGCTCAGACGAGGCCTCCTGC...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTATGCATTCGCCGCTGTaGCACTTGAACTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPMHSPL*HLNLLG
Trigger: ACCCAACAAGTTCAAGTGTCACAGCGGCGAATGCAT...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTAGACTTTGTCCAGGGTaGTGCATTCGCCGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSRLCPG*CIRRCD
Trigger: GTCACAGCGGCGAATGCATCACCCTGGACAAAGTCT...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCTGGTCCCGCACTCTTTaGTGGGTTCATCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCWSRTL*WVHLTS
Trigger: ACTGGTCAGATGAACCCATCAAAGAGTGCGGGACCA...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTCCTCAGGTTGGGGATaGGGCTGGTGTACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTSSGWG*GWCTRS
Trigger: GGAGCGAGTACACCAGCCTCATCCCCAACCTGAGGA...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCAGTACATGAAGCCATaGACAGGATCCACCACGATG +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAQYMKP*TGSTTM
Trigger: CATCGTGGTGGATCCTGTTCATGGCTTCATGTACTG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCAGTACATGAAGCCATaGACAGGATCCACCACGATG +
Preference number: 4 (lower is better)
Translates to: GPVGAICCCVLKATCFSGQYMKP*TGSTTM
Trigger: CATCGTGGTGGATCCTGTTCATGGCTTCATGTACTG...CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCTCAGGCCCCCTTTCTTaGTCTTGGCGGGAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: RACFSYPSRGKEETKIPTSGPLS*SWREFP
Trigger: GGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGA...GGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TGGTCTCGGTGCCACCACGGATTCAGCCAGATCATTTCCGACGCCATGAATCCCTCTGCTGTTGTGTGTTaGAAGCCACTTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WSRCHHGFSQIISDAMNPSAVVC*KPLASL
Trigger: CAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGA...GGGATTCATGGCGTCGGAAATGATCTGGCTGAATCCGTGGTGGCACCGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCACTTGTAGGAGATaGATTTCCCGTCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPPTCRR*ISRLGT
Trigger: AGTGCCAAGACGGGAAATGCATCTCCTACAAGTGGG...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCCTGGCACTCAGCGCTaGCATCGCAGACCCACTTGT +
Preference number: 4 (lower is better)
Translates to: RACFSYPSRGKEETKIPTPGTQR*HRRPTC
Trigger: ACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGG...GGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCCTGACATCGAGTCACAGACGAACTaGCGAGAGATGCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: GAICCCVLKATCFSGPDIESQTN*REMHFP
Trigger: TGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTC...GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTTGCAGGTGGAGCTGTTaGACTGGAAGCTGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPCRWSC*TGSWRD
Trigger: GTCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCA...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGCCGGCTGCCATGGATaGAGTTTCCATCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSAGCHG*SFHQST
Trigger: AGTGCTCTGATGGAAACTGCATCCATGGCAGCCGGC...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTACCAGTAGATTCTATTaGTGGCCACCTCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPTSRFY*WPPPCP
Trigger: TGGACACGGAGGTGGCCAGCAATAGAATCTACTGGT...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCACCAGTAGATTCTATTaGTGGCCACCTCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLTSRFY*WPPPCP
Trigger: TGGACACGGAGGTGGCCAGCAATAGAATCTACTGGT...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTACCAGTAGATTCTATTaGTGGCCACCTCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IAQGGPLTPVHSSWLGEVTSRFY*WPPPCP
Trigger: TGGACACGGAGGTGGCCAGCAATAGAATCTACTGGT...AACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR GCA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGGGTCGGGTGGTTGTGTaGTGTGTCCTTACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLGRVVV*CVLTAV
Trigger: CACAGCCGTAAGGACACAGCACACAACCACCCGACC...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCCAACCCAAGCCATTaGATGGGCACTGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVPNPSH*MGTVRS
Trigger: GCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGG...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCACCCGGATCACGACCTaGTGTGTCCTAGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSTRITT*CVLAGN
Trigger: GTTTCCAGCTAGGACACAGCAGGTCGTGATCCGGGT...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCATGCTCGCAGCCTCTaGCAGGCAGTGTCCCGACCC +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHHARSL*QAVSRP
Trigger: GGGTCGGGACACTGCCTGGCAGAGGCTGCGAGCATG...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTTCATCAGAGCCATCCTaGCACTCAGCGCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVSSEPS*HSALPS
Trigger: CGATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGA...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCGACAAGCACGTCTCCTaGGACTCATCAGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFDKHVS*DSSEPS
Trigger: GGATGGCTCTGATGAGTCCCAGGAGACGTGCTTGTC...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCATGCACTTCCCATCGTaGCAGCGAAACTCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSMHFPS*QRNSSW
Trigger: CCAGGACGAGTTTCGCTGCCACGATGGGAAGTGCAT...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTATGCACTTCCCATCGTaGCAGCGAAACTCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPMHFPS*QRNSSW
Trigger: CCAGGACGAGTTTCGCTGCCACGATGGGAAGTGCAT...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTCTTCGCATCTTCGCTaGGCCACCAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTSSHLR*ATSWKP
Trigger: CGGCTTCCAGCTGGTGGCCCAGCGAAGATGCGAAGA...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGAGAAGAGGTAGGCGATaGAGCCCACAGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLRRGRR*SPQPCR
Trigger: CCTGCAAGGCTGTGGGCTCCATCGCCTACCTCTTCT...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTAGAAGAGGTAGGCGATaGAGCCCACAGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVRRGRR*SPQPCR
Trigger: CCTGCAAGGCTGTGGGCTCCATCGCCTACCTCTTCT...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCTGGGCTCTGTCAAGCTaGGTGCTGCAGATCATTCTC +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCWALSS*VLQIIL
Trigger: GAGAATGATCTGCAGCACCCAGCTTGACAGAGCCCA...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTCACCACGATGGCCCTTaGCTTGGAGCCGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTHHDGP*LGAVLP
Trigger: AGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTG...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTTCACTCCTCTTGGCTaGGTGAGGTTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAFTPLG*VRLWKR
Trigger: TCTCTTCCACAACCTCACCCAGCCAAGAGGAGTGAA...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTTTCACTCCTCTTGGCTaGGTGAGGTTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: IAQGGPLTPVHSSWLGEVFTPLG*VRLWKR
Trigger: TCTCTTCCACAACCTCACCCAGCCAAGAGGAGTGAA...AACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CCA 90 bp GGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCCTGACATCGAGCCCTCACGCTACTaGGCTTCTTCTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: GAICCCVLKATCFSGPDIEPSRY*ASSHFL
Trigger: GAGGAAATGAGAAGAAGCCCAGTAGCGTGAGGGCTC...GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTAGACGAGGAGCACGATaGGGAGGACAATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSRRGAR*GGQWTE
Trigger: CTCTGTCCATTGTCCTCCCCATCGTGCTCCTCGTCT...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAGCCAGGGGGTCCCGTTaGTGCCATCTGCTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKARGSR*CHLLLC
Trigger: ACACAACAGCAGATGGCACCAACGGGACCCCCTGGC...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCGTTTGGCTTAGAGATTaGTGGATGAGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCVWLRD*WMRQGQ
Trigger: CTGGCCCTGCCTCATCCACCAATCTCTAAGCCAAAC...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGCTGAGTTTAGGGGTTTaGCTTAGAGATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: PTQAIAWALSEACSASQMLSLGV*LRDWWM
Trigger: CATCCACCAATCTCTAAGCCAAACCCCTAAACTCAG...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAACACCTCGAAAGACACTaGGTGGGTCATGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTEHLERH*VGHDSG
Trigger: CCCCGAATCATGACCCACCCAGTGTCTTTCGAGGTG...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAAGGAGACCACGGGAATaGAAGTGGGTAGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKRRPRE*KWVGVG
Trigger: CCCGACCCCTACCCACTTCCATTCCCGTGGTCTCCT...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGGGCTTTCCCTGGCCTaGGATCCCATCCCAACACAC +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTGLSLA*DPIPTH
Trigger: GTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCC...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGGGGAGCACGTCTCCTaGGACTCATCAGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTGEHVS*DSSEPS
Trigger: GGATGGCTCTGATGAGTCCCAGGAGACGTGCTCCCC...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535915.5
CDS-3UTR TCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTAGACTTTGTCCAGGGTaGTGCATTCGCCGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVRLCPG*CIRRCD
Trigger: GTCACAGCGGCGAATGCATCACCCTGGACAAAGTCT...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGTGGTCCCGCACTCTTTaGTGGGTTCATCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: LTSPPLSSSMFEDCVTVEWSRTL*WVHLTS
Trigger: ACTGGTCAGATGAACCCATCAAAGAGTGCGGGACCA...CTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTCAGGTGTCGGGATCCTaGCACTCATCGATATCTTCG +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSQVSGS*HSSISS
Trigger: CGAAGATATCGATGAGTGTCAGGATCCCGACACCTG...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACTGGAGCCGTTCTCCCTaGATAACGTTTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHCARPHRACFKHIPINDWSRSP*ITFSSS
Trigger: TGAAGAGGAAAACGTTATTCAGGGAGAACGGCTCCA...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTATGCTTGAGATGGAGTaGAGTTTGGAGTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPMLEME*SLESTQ
Trigger: CTGGGTTGACTCCAAACTTCACTCCATCTCAAGCAT...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAATCCGGTTGCCCCCGTTaGCATCGATGCTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: PGPVSLILHEERKKPKSQSGCPR*HRCLRW
Trigger: CCATCTCAAGCATCGATGTCAACGGGGGCAACCGGA...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTCCTCTTGGCTGGGTaGGGTTGTGGAAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWALLLAG*GCGREP
Trigger: TGGTTCTCTTCCACAACCTCACCCAGCCAAGAGGAG...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTTCGCCCAGAGCTTGGTaGGACATTGTCACTATCTCC +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSSPRAW*DIVTIS
Trigger: GGAGATAGTGACAATGTCTCACCAAGCTCTGGGCGA...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTCACGATCACGGCTTTaGAGTCCCGGTCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTSRSRL*SPGQPA
Trigger: GGCAGGTTGACCGGGACTTCAAAGCCGTGATCGTGA...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAAACTCCTGAACTCAAGTaGTCCAGCTCAGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTETPELK*SSSASQ
Trigger: TTGGGAGGCTGAGCTGGATCACTTGAGTTCAGGAGT...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGAATTTCAGAAAGAACCTaGAGTCCCGTCAAACGATCC +
Preference number: 4 (lower is better)
Translates to: LTEAVTVSPDISATVTRRISERT*SPVKRS
Trigger: GGATCGTTTGACGGGACTTCAGGTTCTTTCTGAAAT...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCCCGAGAATAGTCACTaGACAAATACAGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: GPVGAICCCVLKATCFSGPENSH*TNTATR
Trigger: CCTGGTTGCTGTATTTGTTCAGTGACTATTCTCGGG...CCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTATTCCCGGTCACACTaGCGGCTGCCATGGATGCAG +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTYSRSH*RLPWMQ
Trigger: CTGCATCCATGGCAGCCGGCAGTGTGACCGGGAATA...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATGGAGCCCACAGCCTTaGAGGCCTTCGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKWSPQP*RPSCGG
Trigger: ACCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAATGGAGCCCACAGCCTTaGAGGCCTTCGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQWSPQP*RPSCGG
Trigger: ACCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCA...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCATCTTCCTGACCTCGTaGCGGTTGGTGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFIFLTS*RLVKKR
Trigger: CCTCTTCTTCACCAACCGGCACGAGGTCAGGAAGAT...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAGAGTGGGGGTTGATCTaGGGGGCAGGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKEWGLI*GAGRHR
Trigger: TCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTC...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGGTCGGGTGGTTGTGTaGTGTGTCCTTACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTGRVVV*CVLTAV
Trigger: CACAGCCGTAAGGACACAGCACACAACCACCCGACC...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCCTGACATCGTGTTGAAAGCCACTTaGTTCTCTGGGCCTGACATC +
Preference number: 4 (lower is better)
Translates to: GAICCCVLKATCFSGPDIVLKAT*FSGPDI
Trigger: GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACAC...GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGAGGGGGTCCCGTTGGTaGCATCTGCTGTTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLRGSRW*HLLLCV
Trigger: AACACACAACAGCAGATGGCACCAACGGGACCCCCT...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCACAGCCACACCTGGGTaGAGGCCACGTGTCCTCACG +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQATATPG*RPRVLT
Trigger: CGTGAGGACACGTGGCCTGCACCCAGGTGTGGCTGT...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACTCTGAACTGAGAAAGTaGAAGGAGACCACGGGAATG +
Preference number: 4 (lower is better)
Translates to: SHCARPHRACFKHIPINDSELRK*KETTGM
Trigger: CATTCCCGTGGTCTCCTTGCACTTTCTCAGTTCAGA...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATCATGCTCGCAGCCTCTaGCAGGCAGTGTCCCGACCC +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHHARSL*QAVSRP
Trigger: GGGTCGGGACACTGCCTGGCAGAGGCTGCGAGCATG...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTCATCAGAGCCATCCTaGCACTCAGCGCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTSSEPS*HSALPS
Trigger: CGATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGA...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGGACAAGCACGTCTCCTaGGACTCATCAGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLDKHVS*DSSEPS
Trigger: GGATGGCTCTGATGAGTCCCAGGAGACGTGCTTGTC...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAACCATCCTCCCACCGACAAGCACGTCTCCTaGGACTCATCAGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: IIIAHDSLKCLSSNHPPTDKHVS*DSSEPS
Trigger: GGATGGCTCTGATGAGTCCCAGGAGACGTGCTTGTC...GGTGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCCCTGGGAGCACGTCTTaGGGGGACAGCCTTGCTCGT +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAPGSTS*GDSLAR
Trigger: ACGAGCAAGGCTGTCCCCCCAAGACGTGCTCCCAGG...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTCAGCGCCAGCTGGAGTaGATGCACTCGCCACTTAGG +
Preference number: 4 (lower is better)
Translates to: SSKACIEEVNTLTPEFRGQRQLE*MHSPLR
Trigger: CCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTG...ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAAAGAAGAGGTAGGCGATaGAGCCCACAGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGPVSLILHEERKKPKSQRRGRR*SPQPCR
Trigger: CCTGCAAGGCTGTGGGCTCCATCGCCTACCTCTTCT...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAAGCCCGTCGGGGGCCTaGATGTCTCTGCTGATGACG +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKSPSGA*MSLLMT
Trigger: CGTCATCAGCAGAGACATCCAGGCCCCCGACGGGCT...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCTTTCATCCTCCAAGATaGTCTTCCGGTTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSFHPPR*SSGCPR
Trigger: ACGGGGGCAACCGGAAGACCATCTTGGAGGATGAAA...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCGTAAACTTGGGCGAGTaGGGGTTGATCTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RACFSYPSRGKEETKIPTVNLGE*GLICGA
Trigger: TGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTAC...GGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCAAGCTCCTCATGTCCCTaGCCAGCAGCATGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPSSSCP*PAACRP
Trigger: CGGACGGCATGCTGCTGGCCAGGGACATGAGGAGCT...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGACGGGAACAGGTCGGGTaGTTGTGTGCTGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERREQVG*LCAVSL
Trigger: TAAGGACACAGCACACAACCACCCGACCTGTTCCCG...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAAGAGCCCTCACGCTACTaGGCTTCTTCTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTEEPSRY*ASSHFL
Trigger: GAGGAAATGAGAAGAAGCCCAGTAGCGTGAGGGCTC...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp CATACAACGGGGACATCATTCTCCCAAAAAGCGTTGCACACAGTCCAGTTCGTGAGACGAGGAGCACGATaGGGAGGACAATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: HTTGTSFSQKALHTVQFVRRGAR*GGQWTE
Trigger: CTCTGTCCATTGTCCTCCCCATCGTGCTCCTCGTCT...CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAAGACGAGGAGCACGATaGGGAGGACAATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWARRGAR*GGQWTE
Trigger: CTCTGTCCATTGTCCTCCCCATCGTGCTCCTCGTCT...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAACCCAAGCCATTGCATaGGCACTGTCCGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWATQAIA*ALSEAC
Trigger: ACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGT...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCCTTCCTGGAGAGAAATaGAGGTGTCATCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSLPGEK*RCHPGP
Trigger: GGGACCAGGATGACACCTCCATTTCTCTCCAGGAAG...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTGGCTTAGAGATTGGTaGATGAGGCAGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTWLRDW*MRQGQG
Trigger: CCCCTGGCCCTGCCTCATCCACCAATCTCTAAGCCA...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCAGGCTGGAAAGCAGTaGCATAATCATAGCTCACGA +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLQAGKQ*HNHSSR
Trigger: TCGTGAGCTATGATTATGCCACTGCTTTCCAGCCTG...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCAGGCTGGAAAGCAGTaGCATAATCATAGCTCACGA +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSAQAGKQ*HNHSSR
Trigger: TCGTGAGCTATGATTATGCCACTGCTTTCCAGCCTG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCCGTCAGGGCGACAGGTaGCCACAGGACAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQARQGDR*PQDSLA
Trigger: AGCAAGGCTGTCCTGTGGCCACCTGTCGCCCTGACG...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545707.5
CDS-3UTR TCA 90 bp TCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTCCCCGGATTTGCAGGTaGCAGACAAGCACGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSKACIEEVNTLTPEFRGPRICR*QTSTSP
Trigger: AGGAGACGTGCTTGTCTGTCACCTGCAAATCCGGGG...ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACAAGCAGTCCCGGTCTaGGTCACAGACGAACTGCCG +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKQAVPV*VTDELP
Trigger: CGGCAGTTCGTCTGTGACTCAGACCGGGACTGCTTG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACGCCGCTGTGACACTTaGACTTGTTGGGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKRRCDT*TCWVPR
Trigger: GCGAGGGACCCAACAAGTTCAAGTGTCACAGCGGCG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTATGCATTCGCCGCTGTaGCACTTGAACTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSMHSPL*HLNLLG
Trigger: ACCCAACAAGTTCAAGTGTCACAGCGGCGAATGCAT...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACAGGTGTCGGGATCCTaGCACTCATCGATATCTTCG +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAQVSGS*HSSISS
Trigger: CGAAGATATCGATGAGTGTCAGGATCCCGACACCTG...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCAGTACATGAAGCCATaGACAGGATCCACCACGATG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFQYMKP*TGSTTM
Trigger: CATCGTGGTGGATCCTGTTCATGGCTTCATGTACTG...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTCAGTACATGAAGCCATaGACAGGATCCACCACGATG +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSQYMKP*TGSTTM
Trigger: CATCGTGGTGGATCCTGTTCATGGCTTCATGTACTG...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCAGGCCCCCTTTCTTaGTCTTGGCGGGAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIASGPLS*SWREFP
Trigger: GGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATTCAGGCCCCCTTTCTTaGTCTTGGCGGGAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHSGPLS*SWREFP
Trigger: GGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGA...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCATGCTTGAGATGGAGTaGAGTTTGGAGTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCMLEME*SLESTQ
Trigger: CTGGGTTGACTCCAAACTTCACTCCATCTCAAGCAT...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTGGGCGAGTGGGGGTTaGTCTGCGGGGCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNWASGG*SAGQGG
Trigger: GCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTGTACAACTCTGAACTaGGAAAGTGCAAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: TKIPTQAIAWALSEACSACTTLN*ESARRP
Trigger: TGGTCTCCTTGCACTTTCTCAGTTCAGAGTTGTACA...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAACTGGGATTACAGGCGTaGGGCACCTGTGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQLGLQA*GTCVWP
Trigger: TGGCCAGACACAGGTGCCTCACGCCTGTAATCCCAG...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCAGTGGTTTAAAAAGTaGCACCCATCTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCQWFKK*HPSPRS
Trigger: GCTTCTGGGAGATGGGTGTCACTTTTTAAACCACTG...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTCCCACTTGTAGGAGATaGATTTCCCGTCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPPTCRR*ISRLGT
Trigger: AGTGCCAAGACGGGAAATGCATCTCCTACAAGTGGG...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCACCCACAGCTGGGGGATaGAGGTGGAGCTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAPTAGG*RWSCCT
Trigger: AGTGCAACAGCTCCACCTGCATCCCCCAGCTGTGGG...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTAGACCCCTACAGCGCTaGGGCCACTCATCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIRPLQR*GHSSEP
Trigger: TGGCTCGGATGAGTGGCCGCAGCGCTGTAGGGGTCT...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTGGAGCCCACAGCCTTaGAGGCCTTCGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIWSPQP*RPSCGG
Trigger: ACCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCA...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAATCTTCCTGACCTCGTaGCGGTTGGTGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAIFLTS*RLVKKR
Trigger: CCTCTTCTTCACCAACCGGCACGAGGTCAGGAAGAT...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACCGCAACAGAGACAGTaGCCAGGACAGAGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKPQQRQ*PGQSRS
Trigger: GGACCGACTCTGTCCTGGGCACTGTCTCTGTTGCGG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAACTGGCAGCCGCCATTaGTCAGGGTGGTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIATGSRH*SGWSSH
Trigger: GTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGT...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGATCTTCTCATTTCCTCTaGCAGCAACGTCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERSSHFL*QQRRPE
Trigger: CTCTGGGCGACGTTGCTGGCAGAGGAAATGAGAAGA...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGACCCGTTGGTGCCATCTaGTGTTGTGTGTTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERPVGAI*CCVLKA
Trigger: GGCTTTCAACACACAACAGCAGATGGCACCAACGGG...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTCACGACAGCCTCAAATaGCTGAGCTCAAACCATCCT +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPHDSLK*LSSNHP
Trigger: AGGATGGTTTGAGCTCAGGCATTTGAGGCTGTCGTG...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGTCCCTGGGGACAATTaGCAATCCCTTGTGACATCT +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSVPGDN*QSLVTS
Trigger: AGATGTCACAAGGGATTGGCAATTGTCCCCAGGGAC...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTAGGGACGCATTTACGTaGTCCGAAACCAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSRDAFT*SETRKA
Trigger: AGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCT...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTTCTCCCAAAAAGCGTTaGACACAGTCCAGTTCGTGC +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPSPKKR*TQSSSC
Trigger: GCACGAACTGGACTGTGTGCAACGCTTTTTGGGAGA...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAGCCCCAGGGCCCCATaGTCGCAGCCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNSPRAP*SQPLPG
Trigger: GCCTGGCAGAGGCTGCGAGCATGGGGCCCTGGGGCT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAGCCACAGGACAGCCTTaGTCGTCTGAGCCGTTGTCG +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAATGQP*SSEPLS
Trigger: CGACAACGGCTCAGACGAGCAAGGCTGTCCTGTGGC...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545707.5
CDS-3UTR CCA 90 bp GGCCTGGGATCCCATCCCAACACACACGACAGAAAACAGTGCAAAATAATAACACATCTGTCGCCCACGTaGCTGAAGATCTCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLGSHPNTHDRKQCKIITHLSPT*LKISAA
Trigger: TGCAGCCGAGATCTTCAGCCACGTGGGCGACAGATG...TGTTATTATTTTGCACTGTTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252444.9
CDS-3UTR CCA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTATGCATTTCCCGTCTTaGCACTGGAACTCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPMHFPS*HWNSFL
Trigger: AAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCAT...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTATGCACTTCCCATCGTaGCAGCGAAACTCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTMHFPS*QRNSSW
Trigger: CCAGGACGAGTTTCGCTGCCACGATGGGAAGTGCAT...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCACAGCGCCAGCTGGAGTaGATGCACTCGCCACTTAGG +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAQRQLE*MHSPLR
Trigger: CCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTG...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAACAGCGCCAGCTGGAGTaGATGCACTCGCCACTTAGG +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQQRQLE*MHSPLR
Trigger: CCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTG...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACATCACAGCGCCAGCTaGAGTGGATGCACTCGCCAC +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKHHSAS*SGCTRH
Trigger: GTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGACATCACAGCGCCAGCTaGAGTGGATGCACTCGCCAC +
Preference number: 4 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGHHSAS*SGCTRH
Trigger: GTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATG...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGACGTCAGGGCGACAGGTaGCCACAGCGCAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGRQGDR*PQRSFP
Trigger: AGGAAAACTGCGCTGTGGCCACCTGTCGCCCTGACG...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTGACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGTTTCCATCAGAGCACTaGAATTCGTCAGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: LTSPPLSSSMFEDCVTVEFPSEH*NSSGRQ
Trigger: CTGTCGCCCTGACGAATTCCAGTGCTCTGATGGAAA...CTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATTGCAGGCCTTCGTGTaGGGGTCCAGCTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIALQAFV*GSSWKP
Trigger: AGGCTTCCAGCTGGACCCCCACACGAAGGCCTGCAA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCATCCTCTTCACGCCCTTaGTATCCGCAACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWASSSRP*YPQQRQ
Trigger: CTGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGA...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAACACCACGATGGCCCTTaGCTTGGAGCCGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQHHDGP*LGAVLP
Trigger: AGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTG...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCACAGGATCCACCACGATaGCCCTTGGCTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPQDPPR*PLAWSR
Trigger: ACGGCTCCAAGCCAAGGGCCATCGTGGTGGATCCTG...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGGCTGGGTGAGGTTGTaGAAGAGAACCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPGWVRL*KRTISS
Trigger: AGAGGATATGGTTCTCTTCCACAACCTCACCCAGCC...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAAGGCTGGGTGAGGTTGTaGAAGAGAACCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTEGWVRL*KRTISS
Trigger: AGAGGATATGGTTCTCTTCCACAACCTCACCCAGCC...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTTCACTCCTCTTGGCTaGGTGAGGTTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFFTPLG*VRLWKR
Trigger: TCTCTTCCACAACCTCACCCAGCCAAGAGGAGTGAA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCAGTTCACTCCTCTTaGCTGGGTGAGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVPVHSS*LGEVVE
Trigger: TTCCACAACCTCACCCAGCCAAGAGGAGTGAACTGG...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGACCAGTTCACTCCTCTTaGCTGGGTGAGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERPVHSS*LGEVVE
Trigger: TTCCACAACCTCACCCAGCCAAGAGGAGTGAACTGG...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTCGCCATTGCTCAGGGTaGTCCTCTCACACCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRRHCSG*SSHTSS
Trigger: TGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCG...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTCGGGAACAGGTCGGGTaGTTGTGTGCTGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTREQVG*LCAVSL
Trigger: TAAGGACACAGCACACAACCACCCGACCTGTTCCCG...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTCGATGGGGAGGACAATaGACAGAGCCCTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: SSKACIEEVNTLTPEFRGRWGGQ*TEPSRY
Trigger: GTAGCGTGAGGGCTCTGTCCATTGTCCTCCCCATCG...ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTACCCAAGCCATTGCATaGGCACTGTCCGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPTQAIA*ALSEAC
Trigger: ACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGT...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTCCTGGAGAGAAATaGAGGTGTCATCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWALPGEK*RCHPGP
Trigger: GGGACCAGGATGACACCTCCATTTCTCTCCAGGAAG...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACTATCTGTACAGGGACGCATTTACGTGCTCCGAAACCAGAAAGGCTTATCACGGGGCAAAGGCTAACCTaGCTGTCTAGCAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: TICTGTHLRAPKPERLITGQRLT*LSSKAC
Trigger: GCAAGCCTTGCTAGACAGCCAGGTTAGCCTTTGCCC...CGTGATAAGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCTGTACAGATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAACCATCCTCCCACCCTCAGGCTCTGCCTCTaGGAAGTGGCATCATTTGGT +
Preference number: 4 (lower is better)
Translates to: IIIAHDSLKCLSSNHPPTLRLCL*EVASFG
Trigger: ACCAAATGATGCCACTTCCCAGAGGCAGAGCCTGAG...GGTGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGATTGTCGTCGCCTTTGTaGCAGGAACCGCGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGLSSPL*QEPRRN
Trigger: GTTCCTCCGCGGTTCCTGTCACAAAGGCGACGACAA...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252444.9
CDS-3UTR TCA 90 bp TCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTTCGCACCTCCAGAACTaGGGAATGCAGCGGTTGACA +
Preference number: 4 (lower is better)
Translates to: SSKACIEEVNTLTPEFRGSHLQN*GMQRLT
Trigger: TGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGA...ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCAAGCAGTCCCGGTCTaGGTCACAGACGAACTGCCG +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIQAVPV*VTDELP
Trigger: CGGCAGTTCGTCTGTGACTCAGACCGGGACTGCTTG...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATGCAGGAGGCCTCGTCTaGGCCGTCCAAGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNAGGLV*AVQAVP
Trigger: CGGGACTGCTTGGACGGCTCAGACGAGGCCTCCTGC...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCGCCGCTGTGACACTTaGACTTGTTGGGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIRRCDT*TCWVPR
Trigger: GCGAGGGACCCAACAAGTTCAAGTGTCACAGCGGCG...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTATGCATTCGCCGCTGTaGCACTTGAACTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVMHSPL*HLNLLG
Trigger: ACCCAACAAGTTCAAGTGTCACAGCGGCGAATGCAT...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTCAGGTGTCGGGATCCTaGCACTCATCGATATCTTCG +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTQVSGS*HSSISS
Trigger: CGAAGATATCGATGAGTGTCAGGATCCCGACACCTG...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTTGGAGCCGTTCTCCCTaGATAACGTTTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSWSRSP*ITFSSS
Trigger: TGAAGAGGAAAACGTTATTCAGGGAGAACGGCTCCA...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGATGCTTGAGATGGAGTaGAGTTTGGAGTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: LTSPPLSSSMFEDCVTVEMLEME*SLESTQ
Trigger: CTGGGTTGACTCCAAACTTCACTCCATCTCAAGCAT...CTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATCCGGTTGCCCCCGTTaGCATCGATGCTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPSGCPR*HRCLRW
Trigger: CCATCTCAAGCATCGATGTCAACGGGGGCAACCGGA...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATTCCGGTTGCCCCCGTTaGCATCGATGCTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHSGCPR*HRCLRW
Trigger: CCATCTCAAGCATCGATGTCAACGGGGGCAACCGGA...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: LTSPPLSSSMFEDCVTVEGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...CTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCTCTGCTGTTGTGTGTTaGAAGCCACTTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSSAVVC*KPLASL
Trigger: CAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGA...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCAGTGGCATCATTTGGTaGATGAGTTTGGTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFSGIIW*MSLVSV
Trigger: CACCGAGACCAAACTCATTCACCAAATGATGCCACT...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCTGGGATCCCATCCCAACACACACGACAGAAAACAGTGCAAAATAATAACAGAGGCCATGGGCTGCTaGTGCACCATGCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: GLGSHPNTHDRKQCKIITEAMGC*CTMHGF
Trigger: AAAACCATGCATGGTGCATCAGCAGCCCATGGCCTC...TGTTATTATTTTGCACTGTTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTACAGCCTCAAATGCCTaGGCTCAAACCATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRTASNA*AQTILP
Trigger: TGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGT...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCTGGGATTACAGGCGTaGGGCACCTGTGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAILGLQA*GTCVWP
Trigger: TGGCCAGACACAGGTGCCTCACGCCTGTAATCCCAG...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAACGAACTGCCGAGAGATaGACTTCCCATCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQRTAER*TSHRGS
Trigger: GCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCG...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGACGAACTGCCGAGAGATaGACTTCCCATCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGRTAER*TSHRGS
Trigger: GCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCG...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCAGACCCCTACAGCGCTaGGGCCACTCATCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: FHLPCLRIVSRWRETQNFRPLQR*GHSSEP
Trigger: TGGCTCGGATGAGTGGCCGCAGCGCTGTAGGGGTCT...GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGCCAGCTGGAGTGGATaGACTCGCCACTTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHASWSG*TRHLGS
Trigger: ACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGC...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAGCCAGCTGGAGTGGATaGACTCGCCACTTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAASWSG*TRHLGS
Trigger: ACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGC...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATTATTCCCGGTCACACTaGCGGCTGCCATGGATGCAG +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHYSRSH*RLPWMQ
Trigger: CTGCATCCATGGCAGCCGGCAGTGTGACCGGGAATA...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAAATCTTCCTGACCTCGTaGCGGTTGGTGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PGPVSLILHEERKKPKSQIFLTS*RLVKKR
Trigger: CCTCTTCTTCACCAACCGGCACGAGGTCAGGAAGAT...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTCTCTGTCAAGCTGGGTaGTGCAGATCATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRLCQAG*CRSFSG
Trigger: CCCAGAGAATGATCTGCAGCACCCAGCTTGACAGAG...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTTCTTCTCATTTCCTCTaGCAGCAACGTCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRSSHFL*QQRRPE
Trigger: CTCTGGGCGACGTTGCTGGCAGAGGAAATGAGAAGA...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTGTGTTGAAAGCCACTTaGTTCTCTGGGCCTGACATC +
Preference number: 4 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVVLKAT*FSGPDI
Trigger: GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACAC...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCTCATCAGAGCCATCCTaGCACTCAGCGCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQASSEPS*HSALPS
Trigger: CGATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGA...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTATGCACTTCCCATCGTaGCAGCGAAACTCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSKACIEEVNTLTPEFRGMHFPS*QRNSSW
Trigger: CCAGGACGAGTTTCGCTGCCACGATGGGAAGTGCAT...ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATCGCCACTTAGGCAGTaGAACTCGAAGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKSPLRQ*NSKAEQ
Trigger: CTGCTCGGCCTTCGAGTTCCACTGCCTAAGTGGCGA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCGCCACTTAGGCAGTaGAACTCGAAGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIASPLRQ*NSKAEQ
Trigger: CTGCTCGGCCTTCGAGTTCCACTGCCTAAGTGGCGA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATCGTCAGGGCGACAGGTaGCCACAGCGCAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHRQGDR*PQRSFP
Trigger: AGGAAAACTGCGCTGTGGCCACCTGTCGCCCTGACG...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTAGGTTCACGCAGAGCTaGCTGCAGGTGTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIRFTQS*LQVSGS
Trigger: GGATCCCGACACCTGCAGCCAGCTCTGCGTGAACCT...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTGCAGGCCTTCGTGTaGGGGTCCAGCTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHLQAFV*GSSWKP
Trigger: AGGCTTCCAGCTGGACCCCCACACGAAGGCCTGCAA...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTTGCAGGCCTTCGTGTaGGGGTCCAGCTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAILQAFV*GSSWKP
Trigger: AGGCTTCCAGCTGGACCCCCACACGAAGGCCTGCAA...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATAGAAGAGGTAGGCGATaGAGCCCACAGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHRRGRR*SPQPCR
Trigger: CCTGCAAGGCTGTGGGCTCCATCGCCTACCTCTTCT...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCAGATGGAGTGAAGTTTaGAGTCAACCCAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSRWSEV*SQPSRG
Trigger: GCCTCTACTGGGTTGACTCCAAACTTCACTCCATCT...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTAGATGGAGTGAAGTTTaGAGTCAACCCAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: ETKIPTQAIAWALSEACSRWSEV*SQPSRG
Trigger: GCCTCTACTGGGTTGACTCCAAACTTCACTCCATCT...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTGACACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACGACAGAAAACATCGATGCTTGAGATaGAGTGAAGTTTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LTRAFPGLGSHPNTHDRKHRCLR*SEVWSQ
Trigger: TTGACTCCAAACTTCACTCCATCTCAAGCATCGATG...TTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTTTCATCCTCCAAGATaGTCTTCCGGTTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTFHPPR*SSGCPR
Trigger: ACGGGGGCAACCGGAAGACCATCTTGGAGGATGAAA...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGGGAGGCACAGATACTaGCAGCCGCCATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHGRHRY*QPPLLR
Trigger: CCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCC...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAGTAAACTTGGGCGAGTaGGGGTTGATCTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKVNLGE*GLICGA
Trigger: TGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTAC...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCAGTAAACTTGGGCGAGTaGGGGTTGATCTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPVNLGE*GLICGA
Trigger: TGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTAC...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAGAGCCCTCACGCTACTaGGCTTCTTCTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKEPSRY*ASSHFL
Trigger: GAGGAAATGAGAAGAAGCCCAGTAGCGTGAGGGCTC...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCACGATGGGGAGGACAATaGACAGAGCCCTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPRWGGQ*TEPSRY
Trigger: GTAGCGTGAGGGCTCTGTCCATTGTCCTCCCCATCG...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGGACCTCATCCTCTGTaGTCTTCTGATAGACGGGGT +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTGPHPL*SSDRRG
Trigger: ACCCCGTCTATCAGAAGACCACAGAGGATGAGGTCC...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCAGGATTGTGTCACGGTaGAGAGAAACTCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLRIVSR*RETQNF
Trigger: GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCT...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCGCAGTGGCTCGATCATaGCTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAAVARS*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCATGATCGAGCCACTGC...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCACAGTGTTTTGTCCCTaGGGACAATTGCCAATCCCT +
Preference number: 4 (lower is better)
Translates to: RGKEETKIPTQAIAWALSTVFCP*GQLPIP
Trigger: AGGGATTGGCAATTGTCCCCAGGGACAAAACACTGT...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCACGGCCCCCACAGCTaGAGTCCCCGGATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNHGPHS*SPRICR
Trigger: CCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCGTG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATCGCACCTCCAGAACTaGGGAATGCAGCGGTTGACA +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPSHLQN*GMQRLT
Trigger: TGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGA...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAAGACTTTGTCCAGGGTaGTGCATTCGCCGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKRLCPG*CIRRCD
Trigger: GTCACAGCGGCGAATGCATCACCCTGGACAAAGTCT...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCTCAGGCCCCCTTTCTTaGTCTTGGCGGGAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: FHLPCLRIVSRWRETQNFSGPLS*SWREFP
Trigger: GGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGA...GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAAATGCCATTGGGCCACTaGATGTTTTCAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: PGPVSLILHEERKKPKSQMPLGH*MFSVTS
Trigger: GCTGGTGACTGAAAACATTCAGTGGCCCAATGGCAT...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTGACATCGATGCTTaGGATGGAGTGAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPVDIDA*DGVKFG
Trigger: TCCAAACTTCACTCCATCTCAAGCATCGATGTCAAC...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTGACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGGTTGACATCGATGCTTaGGATGGAGTGAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LTSPPLSSSMFEDCVTVEVDIDA*DGVKFG
Trigger: TCCAAACTTCACTCCATCTCAAGCATCGATGTCAAC...CTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGACTCCTCTTGGCTGGGTaGGGTTGTGGAAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGLLLAG*GCGREP
Trigger: TGGTTCTCTTCCACAACCTCACCCAGCCAAGAGGAG...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTTCGCCCAGAGCTTGGTaGGACATTGTCACTATCTCC +
Preference number: 4 (lower is better)
Translates to: SSKACIEEVNTLTPEFRGSPRAW*DIVTIS
Trigger: GGAGATAGTGACAATGTCTCACCAAGCTCTGGGCGA...ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCACGTCAGATTTGTCCTTaGAGTCGGGGCCACCATCAC +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIARQICP*SRGHHH
Trigger: GTGATGGTGGCCCCGACTGCAAGGACAAATCTGACG...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCCGTCAGATTTGTCCTTaGAGTCGGGGCCACCATCAC +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQARQICP*SRGHHH
Trigger: GTGATGGTGGCCCCGACTGCAAGGACAAATCTGACG...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCAGCCGGCTGCCATGGATaGAGTTTCCATCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPAGCHG*SFHQST
Trigger: AGTGCTCTGATGGAAACTGCATCCATGGCAGCCGGC...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCGCCGGCTGCCATGGATaGAGTTTCCATCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAAGCHG*SFHQST
Trigger: AGTGCTCTGATGGAAACTGCATCCATGGCAGCCGGC...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp CATACAACGGGGACATCATTCTCCCAAAAAGCGTTGCACACAGTCCAGTTCGTGAGCTCTGGCAGGCAATaGTTTGGTCTTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: HTTGTSFSQKALHTVQFVSSGRQ*FGLLCL
Trigger: AAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCT...CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGTGTTGAAAGCCACTTaGTTCTCTGGGCCTGACATC +
Preference number: 4 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPVLKAT*FSGPDI
Trigger: GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACAC...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCAAGGGGGTCCCGTTGGTaGCATCTGCTGTTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPRGSRW*HLLLCV
Trigger: AACACACAACAGCAGATGGCACCAACGGGACCCCCT...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAAGGGGGTCCCGTTGGTaGCATCTGCTGTTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIARGSRW*HLLLCV
Trigger: AACACACAACAGCAGATGGCACCAACGGGACCCCCT...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGGCTTGGAGGCATTTaGATAGAAGTGGAAGCACTA +
Preference number: 4 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFWLGGI*IEVEAL
Trigger: TAGTGCTTCCACTTCTATGCAAATGCCTCCAAGCCA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp ACTATCTGTACAGGGACGCATTTACGTGCTCCGAAACCAGAAAGGCTTATCACGCTCTCCGGACATCAGTaGAACAGTAACACGGCGATT +
Preference number: 4 (lower is better)
Translates to: TICTGTHLRAPKPERLITLSGHQ*NSNTAI
Trigger: AATCGCCGTGTTACTGTTGCACTGATGTCCGGAGAG...CGTGATAAGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCTGTACAGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTCTCTCCGGACATCAGTaGAACAGTAACACGGCGATT +
Preference number: 4 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPLSGHQ*NSNTAI
Trigger: AATCGCCGTGTTACTGTTGCACTGATGTCCGGAGAG...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCATGCTCGCAGCCTCTaGCAGGCAGTGTCCCGACCC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNHARSL*QAVSRP
Trigger: GGGTCGGGACACTGCCTGGCAGAGGCTGCGAGCATG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAAGATGGAGTGAAGTTTaGAGTCAACCCAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWARWSEV*SQPSRG
Trigger: GCCTCTACTGGGTTGACTCCAAACTTCACTCCATCT...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTTTTCATCCTCCAAGATaGTCTTCCGGTTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: SSKACIEEVNTLTPEFRGFHPPR*SSGCPR
Trigger: ACGGGGGCAACCGGAAGACCATCTTGGAGGATGAAA...ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGGCTGGGTGAGGTTGTaGAAGAGAACCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTGWVRL*KRTISS
Trigger: AGAGGATATGGTTCTCTTCCACAACCTCACCCAGCC...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTTTCACTCCTCTTGGCTaGGTGAGGTTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTFTPLG*VRLWKR
Trigger: TCTCTTCCACAACCTCACCCAGCCAAGAGGAGTGAA...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCGCCATTGCTCAGGGTaGTCCTCTCACACCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHRHCSG*SSHTSS
Trigger: TGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCG...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAACGCCATTGCTCAGGGTaGTCCTCTCACACCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQRHCSG*SSHTSS
Trigger: TGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCG...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACGGGAACAGGTCGGGTaGTTGTGTGCTGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKREQVG*LCAVSL
Trigger: TAAGGACACAGCACACAACCACCCGACCTGTTCCCG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCGATGGGGAGGACAATaGACAGAGCCCTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIRWGGQ*TEPSRY
Trigger: GTAGCGTGAGGGCTCTGTCCATTGTCCTCCCCATCG...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCAAGACGAGGAGCACGATaGGGAGGACAATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPRRGAR*GGQWTE
Trigger: CTCTGTCCATTGTCCTCCCCATCGTGCTCCTCGTCT...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCTGGCAGGCAATGCTTTaGTCTTCTCTGTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCWQAML*SSLSLN
Trigger: ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCA...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCAACCCAAGCCATTGCATaGGCACTGTCCGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPTQAIA*ALSEAC
Trigger: ACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGT...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ACTATCTGTACAGGGACGCATTTACGTGCTCCGAAACCAGAAAGGCTTATCACGAGTGGAAGCACTAGGTaGGCGGACATAAAGACGACA +
Preference number: 4 (lower is better)
Translates to: TICTGTHLRAPKPERLITSGSTR*ADIKTT
Trigger: TGTCGTCTTTATGTCCGCCCACCTAGTGCTTCCACT...CGTGATAAGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCTGTACAGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTCGCACCTCCAGAACTaGGGAATGCAGCGGTTGACA +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAISHLQN*GMQRLT
Trigger: TGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGA...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GGCCTGGGATCCCATCCCAACACACACGACAGAAAACAGTGCAAAATAATAACAATGCATTCGCCGCTGTaGCACTTGAACTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GLGSHPNTHDRKQCKIITMHSPL*HLNLLG
Trigger: ACCCAACAAGTTCAAGTGTCACAGCGGCGAATGCAT...TGTTATTATTTTGCACTGTTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATTTGATGGGTTCATCTaGCCAGTCCCGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKFDGFI*PVPAVS
Trigger: AGAGACTGCCGGGACTGGTCAGATGAACCCATCAAA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCTTTGATGGGTTCATCTaGCCAGTCCCGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAFDGFI*PVPAVS
Trigger: AGAGACTGCCGGGACTGGTCAGATGAACCCATCAAA...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAATGGTCCCGCACTCTTTaGTGGGTTCATCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQWSRTL*WVHLTS
Trigger: ACTGGTCAGATGAACCCATCAAAGAGTGCGGGACCA...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAATGGAGCCGTTCTCCCTaGATAACGTTTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGPVSLILHEERKKPKSQWSRSP*ITFSSS
Trigger: TGAAGAGGAAAACGTTATTCAGGGAGAACGGCTCCA...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAGTTGACATCGATGCTTaGGATGGAGTGAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAVDIDA*DGVKFG
Trigger: TCCAAACTTCACTCCATCTCAAGCATCGATGTCAAC...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCAGCCTCAGCCTCTGTaGGGCAGCTCCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNQPQPL*GSSSCP
Trigger: GGGACATGAGGAGCTGCCTCACAGAGGCTGAGGCTG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACAGCCTCAGCCTCTGTaGGGCAGCTCCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKQPQPL*GSSSCP
Trigger: GGGACATGAGGAGCTGCCTCACAGAGGCTGAGGCTG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATCGCCCAGAGCTTGGTaGGACATTGTCACTATCTCC +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKSPRAW*DIVTIS
Trigger: GGAGATAGTGACAATGTCTCACCAAGCTCTGGGCGA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCGCCCAGAGCTTGGTaGGACATTGTCACTATCTCC +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIASPRAW*DIVTIS
Trigger: GGAGATAGTGACAATGTCTCACCAAGCTCTGGGCGA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTACAAGATTGGGGAAGTaGATGGCTTGGAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTTRLGK*MAWRHL
Trigger: CAAATGCCTCCAAGCCATTCACTTCCCCAATCTTGT...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp ATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAACCATCCTCCCACCATTTCAGAAAGAACCTaGAGTCCCGTCAAACGATCC +
Preference number: 4 (lower is better)
Translates to: IIIAHDSLKCLSSNHPPTISERT*SPVKRS
Trigger: GGATCGTTTGACGGGACTTCAGGTTCTTTCTGAAAT...GGTGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAGAGTCACAGACGAACTaGCGAGAGATGCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKESQTN*REMHFP
Trigger: TGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTC...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGCCGGCTGCCATGGATaGAGTTTCCATCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHAGCHG*SFHQST
Trigger: AGTGCTCTGATGGAAACTGCATCCATGGCAGCCGGC...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATGGAGCCCACAGCCTTaGAGGCCTTCGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKWSPQP*RPSCGG
Trigger: ACCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCAATCTTCCTGACCTCGTaGCGGTTGGTGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPIFLTS*RLVKKR
Trigger: CCTCTTCTTCACCAACCGGCACGAGGTCAGGAAGAT...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAACTCTGTCAAGCTGGGTaGTGCAGATCATTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQLCQAG*CRSFSG
Trigger: CCCAGAGAATGATCTGCAGCACCCAGCTTGACAGAG...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCTTCTCATTTCCTCTaGCAGCAACGTCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIASSHFL*QQRRPE
Trigger: CTCTGGGCGACGTTGCTGGCAGAGGAAATGAGAAGA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ACTATCTGTACAGGGACGCATTTACGTGCTCCGAAACCAGAAAGGCTTATCACGAGCTCTGGCAGGCAATaGTTTGGTCTTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TICTGTHLRAPKPERLITSSGRQ*FGLLCL
Trigger: AAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCT...CGTGATAAGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCTGTACAGATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGACCCGTTGGTGCCATCTaGTGTTGTGTGTTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGPVGAI*CCVLKA
Trigger: GGCTTTCAACACACAACAGCAGATGGCACCAACGGG...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTACCCGGATCACGACCTaGTGTGTCCTAGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAITRITT*CVLAGN
Trigger: GTTTCCAGCTAGGACACAGCAGGTCGTGATCCGGGT...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACCTGGGAGCACGTCTTaGGGGGACAGCCTTGCTCGT +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKPGSTS*GDSLAR
Trigger: ACGAGCAAGGCTGTCCCCCCAAGACGTGCTCCCAGG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCTGGGATCCCATCCCAACACACACGACAGAAAACAGTGCAAAATAATAACAAGTAGATTCTATTGCTaGCCACCTCCGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLGSHPNTHDRKQCKIITSRFYC*PPPCPE
Trigger: CTCTGGACACGGAGGTGGCCAGCAATAGAATCTACT...TGTTATTATTTTGCACTGTTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATTGGGCTCTGTCAAGCTaGGTGCTGCAGATCATTCTC +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHWALSS*VLQIIL
Trigger: GAGAATGATCTGCAGCACCCAGCTTGACAGAGCCCA...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCTCTGTCAAGCTaGGTGCTGCAGATCATTCTC +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAWALSS*VLQIIL
Trigger: GAGAATGATCTGCAGCACCCAGCTTGACAGAGCCCA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCTGGGCTCTGTCAAGCTaGGTGCTGCAGATCATTCTC +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAWALSS*VLQIIL
Trigger: GAGAATGATCTGCAGCACCCAGCTTGACAGAGCCCA...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAATCCTCTTCACGCCCTTaGTATCCGCAACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQSSSRP*YPQQRQ
Trigger: CTGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGA...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATCCTCTTCACGCCCTTaGTATCCGCAACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKSSSRP*YPQQRQ
Trigger: CTGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGATCCTCTTCACGCCCTTaGTATCCGCAACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGSSSRP*YPQQRQ
Trigger: CTGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGA...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATTTCATCCTCCAAGATaGTCTTCCGGTTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKFHPPR*SSGCPR
Trigger: ACGGGGGCAACCGGAAGACCATCTTGGAGGATGAAA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GGCCTGGGATCCCATCCCAACACACACGACAGAAAACAGTGCAAAATAATAACAGGCTGGGTGAGGTTGTaGAAGAGAACCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: GLGSHPNTHDRKQCKIITGWVRL*KRTISS
Trigger: AGAGGATATGGTTCTCTTCCACAACCTCACCCAGCC...TGTTATTATTTTGCACTGTTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACCAGTTCACTCCTCTTaGCTGGGTGAGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKPVHSS*LGEVVE
Trigger: TTCCACAACCTCACCCAGCCAAGAGGAGTGAACTGG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAGCTCCTCATGTCCCTaGCCAGCAGCATGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNSSSCP*PAACRP
Trigger: CGGACGGCATGCTGCTGGCCAGGGACATGAGGAGCT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAGAGCCCTCACGCTACTaGGCTTCTTCTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAEPSRY*ASSHFL
Trigger: GAGGAAATGAGAAGAAGCCCAGTAGCGTGAGGGCTC...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAGGACCTCATCCTCTGTaGTCTTCTGATAGACGGGGT +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKGPHPL*SSDRRG
Trigger: ACCCCGTCTATCAGAAGACCACAGAGGATGAGGTCC...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAGGACCTCATCCTCTGTaGTCTTCTGATAGACGGGGT +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAGPHPL*SSDRRG
Trigger: ACCCCGTCTATCAGAAGACCACAGAGGATGAGGTCC...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTTGGCAGGCAATGCTTTaGTCTTCTCTGTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPWQAML*SSLSLN
Trigger: ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCA...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCACTTCCTGGAGAGAAATaGAGGTGTCATCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIALPGEK*RCHPGP
Trigger: GGGACCAGGATGACACCTCCATTTCTCTCCAGGAAG...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCCTTCCTGGAGAGAAATaGAGGTGTCATCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQALPGEK*RCHPGP
Trigger: GGGACCAGGATGACACCTCCATTTCTCTCCAGGAAG...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCGTTTGGCTTAGAGATTaGTGGATGAGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAVWLRD*WMRQGQ
Trigger: CTGGCCCTGCCTCATCCACCAATCTCTAAGCCAAAC...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CATACAACGGGGACATCATTCTCCCAAAAAGCGTTGCACACAGTCCAGTTCGTGCTGAGTTTAGGGGTTTaGCTTAGAGATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: HTTGTSFSQKALHTVQFVLSLGV*LRDWWM
Trigger: CATCCACCAATCTCTAAGCCAAACCCCTAAACTCAG...CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGACTGAGTTTAGGGGTTTaGCTTAGAGATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERLSLGV*LRDWWM
Trigger: CATCCACCAATCTCTAAGCCAAACCCCTAAACTCAG...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGGGCAAAGGCTAACCTaGCTGTCTAGCAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHGQRLT*LSSKAC
Trigger: GCAAGCCTTGCTAGACAGCCAGGTTAGCCTTTGCCC...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATCACCTCGAAAGACACTaGGTGGGTCATGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHHLERH*VGHDSG
Trigger: CCCCGAATCATGACCCACCCAGTGTCTTTCGAGGTG...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ACTATCTGTACAGGGACGCATTTACGTGCTCCGAAACCAGAAAGGCTTATCACGACAGTGTTTTGTCCCTaGGGACAATTGCCAATCCCT +
Preference number: 4 (lower is better)
Translates to: TICTGTHLRAPKPERLITTVFCP*GQLPIP
Trigger: AGGGATTGGCAATTGTCCCCAGGGACAAAACACTGT...CGTGATAAGCCTTTCTGGTTTCGGAGCACGTAAATGCGTCCCTGTACAGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATACAGCCTTGCTCGTCTaGGCCGTTGTCGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNTALLV*AVVAVH
Trigger: GTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAACAGCCTTGCTCGTCTaGGCCGTTGTCGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKTALLV*AVVAVH
Trigger: GTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGT...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTTGATGGGTTCATCTaGCCAGTCCCGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHFDGFI*PVPAVS
Trigger: AGAGACTGCCGGGACTGGTCAGATGAACCCATCAAA...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTCCTCAGGTTGGGGATaGGGCTGGTGTACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNSSGWG*GWCTRS
Trigger: GGAGCGAGTACACCAGCCTCATCCCCAACCTGAGGA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATCAGGCCCCCTTTCTTaGTCTTGGCGGGAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKSGPLS*SWREFP
Trigger: GGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCGCCCAGAGCTTGGTaGGACATTGTCACTATCTCC +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHSPRAW*DIVTIS
Trigger: GGAGATAGTGACAATGTCTCACCAAGCTCTGGGCGA...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGCATCATTTGGTGAATaGGTTTGGTCTCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHASFGE*VWSRCH
Trigger: GTGGCACCGAGACCAAACTCATTCACCAAATGATGC...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATACAGCCTCAAATGCCTaGGCTCAAACCATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHTASNA*AQTILP
Trigger: TGGGAGGATGGTTTGAGCTCAGGCATTTGAGGCTGT...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATACTCCTGAACTCAAGTaGTCCAGCTCAGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHTPELK*SSSASQ
Trigger: TTGGGAGGCTGAGCTGGATCACTTGAGTTCAGGAGT...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGAGTCACAGACGAACTaGCGAGAGATGCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIESQTN*REMHFP
Trigger: TGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTC...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCACATCGCTCATGTCCTTaGAGTCATATTCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAHRSCP*SHIPGH
Trigger: GTGACCGGGAATATGACTGCAAGGACATGAGCGATG...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAACCAGTAGATTCTATTaGTGGCCACCTCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKTSRFY*WPPPCP
Trigger: TGGACACGGAGGTGGCCAGCAATAGAATCTACTGGT...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCCGCAACAGAGACAGTaGCCAGGACAGAGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNPQQRQ*PGQSRS
Trigger: GGACCGACTCTGTCCTGGGCACTGTCTCTGTTGCGG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATACTGGCAGCCGCCATTaGTCAGGGTGGTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNTGSRH*SGWSSH
Trigger: GTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCAGTCCCTGGGGACAATTaGCAATCCCTTGTGACATCT +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPVPGDN*QSLVTS
Trigger: AGATGTCACAAGGGATTGGCAATTGTCCCCAGGGAC...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAATCTCCCAAAAAGCGTTaGACACAGTCCAGTTCGTGC +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQSPKKR*TQSSSC
Trigger: GCACGAACTGGACTGTGTGCAACGCTTTTTGGGAGA...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTATGCATTTCCCGTCTTaGCACTGGAACTCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTMHFPS*HWNSFL
Trigger: AAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCAT...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACGTCAGGGCGACAGGTaGCCACAGCGCAGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKRQGDR*PQRSFP
Trigger: AGGAAAACTGCGCTGTGGCCACCTGTCGCCCTGACG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATCTTCGCATCTTCGCTaGGCCACCAGCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKSSHLR*ATSWKP
Trigger: CGGCTTCCAGCTGGTGGCCCAGCGAAGATGCGAAGA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAGGTTCACGCAGAGCTaGCTGCAGGTGTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNRFTQS*LQVSGS
Trigger: GGATCCCGACACCTGCAGCCAGCTCTGCGTGAACCT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTTGCAGGCCTTCGTGTaGGGGTCCAGCTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNLQAFV*GSSWKP
Trigger: AGGCTTCCAGCTGGACCCCCACACGAAGGCCTGCAA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAAGTAGATTCTATTGCTaGCCACCTCCGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKSRFYC*PPPCPE
Trigger: CTCTGGACACGGAGGTGGCCAGCAATAGAATCTACT...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATAGTAGATTCTATTGCTaGCCACCTCCGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHSRFYC*PPPCPE
Trigger: CTCTGGACACGGAGGTGGCCAGCAATAGAATCTACT...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAAGTAGATTCTATTGCTaGCCACCTCCGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIASRFYC*PPPCPE
Trigger: CTCTGGACACGGAGGTGGCCAGCAATAGAATCTACT...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCAGGATCCACCACGATaGCCCTTGGCTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNQDPPR*PLAWSR
Trigger: ACGGCTCCAAGCCAAGGGCCATCGTGGTGGATCCTG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCACTCCTCTTGGCTaGGTGAGGTTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPFTPLG*VRLWKR
Trigger: TCTCTTCCACAACCTCACCCAGCCAAGAGGAGTGAA...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATGGGAGGCACAGATACTaGCAGCCGCCATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNGRHRY*QPPLLR
Trigger: CCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCC...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATAGTGGAAGCACTAGGTaGGCGGACATAAAGACGACA +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHSGSTR*ADIKTT
Trigger: TGTCGTCTTTATGTCCGCCCACCTAGTGCTTCCACT...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGATTGGGGAAGTGAATaGCTTGGAGGCATTTGCATA +
Preference number: 4 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPDWGSE*LGGICI
Trigger: TATGCAAATGCCTCCAAGCCATTCACTTCCCCAATC...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACCCCGGATTTGCAGGTaGCAGACAAGCACGTCTCCT +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKPRICR*QTSTSP
Trigger: AGGAGACGTGCTTGTCTGTCACCTGCAAATCCGGGG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATGGAGCCGTTCTCCCTaGATAACGTTTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKWSRSP*ITFSSS
Trigger: TGAAGAGGAAAACGTTATTCAGGGAGAACGGCTCCA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTATGCCATTGGGCCACTaGATGTTTTCAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIMPLGH*MFSVTS
Trigger: GCTGGTGACTGAAAACATTCAGTGGCCCAATGGCAT...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGCTTGAGATGGAGTaGAGTTTGGAGTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAMLEME*SLESTQ
Trigger: CTGGGTTGACTCCAAACTTCACTCCATCTCAAGCAT...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTCCGGTTGCCCCCGTTaGCATCGATGCTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNSGCPR*HRCLRW
Trigger: CCATCTCAAGCATCGATGTCAACGGGGGCAACCGGA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAGGTCTTCTCTGTCTTTaGATAAAACAAGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKGLLCL*IKQGRR
Trigger: TCGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACC...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCCAGTGGTTTAAAAAGTaGCACCCATCTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAQWFKK*HPSPRS
Trigger: GCTTCTGGGAGATGGGTGTCACTTTTTAAACCACTG...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCCCACTTGTAGGAGATaGATTTCCCGTCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIPTCRR*ISRLGT
Trigger: AGTGCCAAGACGGGAAATGCATCTCCTACAAGTGGG...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCATCGCTCATGTCCTTaGAGTCATATTCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIHRSCP*SHIPGH
Trigger: GTGACCGGGAATATGACTGCAAGGACATGAGCGATG...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATCATCGCTCATGTCCTTaGAGTCATATTCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHHRSCP*SHIPGH
Trigger: GTGACCGGGAATATGACTGCAAGGACATGAGCGATG...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAAGCTCTGGCAGGCAATaGTTTGGTCTTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKSSGRQ*FGLLCL
Trigger: AAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCT...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATTGCCCAGGCTGGAGTaGAGTGGCTCGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKLPRLE*SGSIMA
Trigger: AGCCATGATCGAGCCACTGCACTCCAGCCTGGGCAA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATCATCAGAGCCATCCTaGCACTCAGCGCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKSSEPS*HSALPS
Trigger: CGATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTTCCATCAGAGCACTaGAATTCGTCAGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHFPSEH*NSSGRQ
Trigger: CTGTCGCCCTGACGAATTCCAGTGCTCTGATGGAAA...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAGAAGAGGTAGGCGATaGAGCCCACAGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNRRGRR*SPQPCR
Trigger: CCTGCAAGGCTGTGGGCTCCATCGCCTACCTCTTCT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATAGTAGATTCTATTGCTaGCCACCTCCGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHSRFYC*PPPCPE
Trigger: CTCTGGACACGGAGGTGGCCAGCAATAGAATCTACT...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTCATCGATGCTTGAGATaGAGTGAAGTTTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTHRCLR*SEVWSQ
Trigger: TTGACTCCAAACTTCACTCCATCTCAAGCATCGATG...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACGATGGGGAGGACAATaGACAGAGCCCTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKRWGGQ*TEPSRY
Trigger: GTAGCGTGAGGGCTCTGTCCATTGTCCTCCCCATCG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCTGGCAGGCAATGCTTTaGTCTTCTCTGTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: RACFSYPSRGKEETKIPTWQAML*SSLSLN
Trigger: ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCA...GGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTCATGAATCCCTTTCCTaGCTTAAGGAAGGTACAAAC +
Preference number: 4 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPHESLS*LKEGTN
Trigger: GTTTGTACCTTCCTTAAGCCAGGAAAGGGATTCATG...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATCGCACCTCCAGAACTaGGGAATGCAGCGGTTGACA +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKSHLQN*GMQRLT
Trigger: TGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAGACTTTGTCCAGGGTaGTGCATTCGCCGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNRLCPG*CIRRCD
Trigger: GTCACAGCGGCGAATGCATCACCCTGGACAAAGTCT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAGTTGACATCGATGCTTaGGATGGAGTGAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAVDIDA*DGVKFG
Trigger: TCCAAACTTCACTCCATCTCAAGCATCGATGTCAAC...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCTCCTCTTGGCTGGGTaGGGTTGTGGAAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNLLLAG*GCGREP
Trigger: TGGTTCTCTTCCACAACCTCACCCAGCCAAGAGGAG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACTCCTCTTGGCTGGGTaGGGTTGTGGAAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKLLLAG*GCGREP
Trigger: TGGTTCTCTTCCACAACCTCACCCAGCCAAGAGGAG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGATGTACAACTCTGAACTaGGAAAGTGCAAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGCTTLN*ESARRP
Trigger: TGGTCTCCTTGCACTTTCTCAGTTCAGAGTTGTACA...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp TTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCATCGCTCATGTCCTTaGAGTCATATTCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: FHLPCLRIVSRWRETQNFHRSCP*SHIPGH
Trigger: GTGACCGGGAATATGACTGCAAGGACATGAGCGATG...GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATAGCTCTGGCAGGCAATaGTTTGGTCTTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHSSGRQ*FGLLCL
Trigger: AAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCT...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAATGGCTTGGAGGCATTTaGATAGAAGTGGAAGCACTA +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQWLGGI*IEVEAL
Trigger: TAGTGCTTCCACTTCTATGCAAATGCCTCCAAGCCA...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATACCCGGATCACGACCTaGTGTGTCCTAGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNTRITT*CVLAGN
Trigger: GTTTCCAGCTAGGACACAGCAGGTCGTGATCCGGGT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAGTGTCAGACAGCCTTaGTCGTCTGAGCCGTTGTCG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNSVRQP*SSEPLS
Trigger: CGACAACGGCTCAGACGAGCAAGGCTGTCTGACACT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455727.6
CDS-3UTR CCA 90 bp TTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCTTTCCATCAGAGCACTaGAATTCGTCAGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: FHLPCLRIVSRWRETQNFFPSEH*NSSGRQ
Trigger: CTGTCGCCCTGACGAATTCCAGTGCTCTGATGGAAA...GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACGCCATTGCTCAGGGTaGTCCTCTCACACCAGTTCA +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKRHCSG*SSHTSS
Trigger: TGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCGCCATTGCTCAGGGTaGTCCTCTCACACCAGTTCA +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNRHCSG*SSHTSS
Trigger: TGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAAGACGAGGAGCACGATaGGGAGGACAATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKRRGAR*GGQWTE
Trigger: CTCTGTCCATTGTCCTCCCCATCGTGCTCCTCGTCT...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATACCCAAGCCATTGCATaGGCACTGTCCGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNTQAIA*ALSEAC
Trigger: ACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTGGTCCCGCACTCTTTaGTGGGTTCATCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNWSRTL*WVHLTS
Trigger: ACTGGTCAGATGAACCCATCAAAGAGTGCGGGACCA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACAGGTGTCGGGATCCTaGCACTCATCGATATCTTCG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKQVSGS*HSSISS
Trigger: CGAAGATATCGATGAGTGTCAGGATCCCGACACCTG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATCGCCCAGAGCTTGGTaGGACATTGTCACTATCTCC +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKSPRAW*DIVTIS
Trigger: GGAGATAGTGACAATGTCTCACCAAGCTCTGGGCGA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCGCCACCGTACCCAGCTaGTTTTTAACTTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAATVPS*FLTFWF
Trigger: AAACCAAAAAGTTAAAAATCAGCTGGGTACGGTGGC...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCACCGTACCCAGCTaGTTTTTAACTTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQATVPS*FLTFWF
Trigger: AAACCAAAAAGTTAAAAATCAGCTGGGTACGGTGGC...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATATCTTCCTGACCTCGTaGCGGTTGGTGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNIFLTS*RLVKKR
Trigger: CCTCTTCTTCACCAACCGGCACGAGGTCAGGAAGAT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAATCTTCCTGACCTCGTaGCGGTTGGTGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKIFLTS*RLVKKR
Trigger: CCTCTTCTTCACCAACCGGCACGAGGTCAGGAAGAT...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTCTTCTCATTTCCTCTaGCAGCAACGTCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNSSHFL*QQRRPE
Trigger: CTCTGGGCGACGTTGCTGGCAGAGGAAATGAGAAGA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATGGGCTCTGTCAAGCTaGGTGCTGCAGATCATTCTC +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKWALSS*VLQIIL
Trigger: GAGAATGATCTGCAGCACCCAGCTTGACAGAGCCCA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTCCTCTTCACGCCCTTaGTATCCGCAACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNSSSRP*YPQQRQ
Trigger: CTGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACATCGATGCTTGAGATaGAGTGAAGTTTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: AWALSEACSASQMNKYIKHRCLR*SEVWSQ
Trigger: TTGACTCCAAACTTCACTCCATCTCAAGCATCGATG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCATCGATGCTTGAGATaGAGTGAAGTTTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LILHEERKKPKSQPKPLHHRCLR*SEVWSQ
Trigger: TTGACTCCAAACTTCACTCCATCTCAAGCATCGATG...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATGGACCTCATCCTCTGTaGTCTTCTGATAGACGGGGT +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNGPHPL*SSDRRG
Trigger: ACCCCGTCTATCAGAAGACCACAGAGGATGAGGTCC...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGGCAGGCAATGCTTTaGTCTTCTCTGTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: VSLILHEERKKPKSQPKPWQAML*SSLSLN
Trigger: ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCA...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAAGGATTGTGTCACGGTaGAGAGAAACTCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQRIVSR*RETQNF
Trigger: GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCT...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCACATGAATCCCTTTCCTaGCTTAAGGAAGGTACAAAC +
Preference number: 4 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAHESLS*LKEGTN
Trigger: GTTTGTACCTTCCTTAAGCCAGGAAAGGGATTCATG...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCTCAGGCTCTGCCTCTaGGAAGTGGCATCATTTGGT +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNLRLCL*EVASFG
Trigger: ACCAAATGATGCCACTTCCCAGAGGCAGAGCCTGAG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACAGTACATGAAGCCATaGACAGGATCCACCACGATG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKQYMKP*TGSTTM
Trigger: CATCGTGGTGGATCCTGTTCATGGCTTCATGTACTG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAATGCCATTGGGCCACTaGATGTTTTCAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKMPLGH*MFSVTS
Trigger: GCTGGTGACTGAAAACATTCAGTGGCCCAATGGCAT...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACCCACTTGTAGGAGATaGATTTCCCGTCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKPTCRR*ISRLGT
Trigger: AGTGCCAAGACGGGAAATGCATCTCCTACAAGTGGG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCACGACAGCCTCAAATaGCTGAGCTCAAACCATCCT +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNHDSLK*LSSNHP
Trigger: AGGATGGTTTGAGCTCAGGCATTTGAGGCTGTCGTG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATTTCCATCAGAGCACTaGAATTCGTCAGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKFPSEH*NSSGRQ
Trigger: CTGTCGCCCTGACGAATTCCAGTGCTCTGATGGAAA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATTCACTCCTCTTGGCTaGGTGAGGTTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKFTPLG*VRLWKR
Trigger: TCTCTTCCACAACCTCACCCAGCCAAGAGGAGTGAA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATAGGATTGTGTCACGGTaGAGAGAAACTCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHRIVSR*RETQNF
Trigger: GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCT...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCGATTGGGGAAGTGAATaGCTTGGAGGCATTTGCATA +
Preference number: 4 (lower is better)
Translates to: FHLPCLRIVSRWRETQNFDWGSE*LGGICI
Trigger: TATGCAAATGCCTCCAAGCCATTCACTTCCCCAATC...GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
3UTR CAA 72 bp ATACATACAACGGGGACATCATTCTCCCAAAAAGCGTaGCACACAGTCCAGTTCGTGCAAATAATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: IHTTGTSFSQKA*HTVQFVQIIFV
Trigger: TACAAAGATTATTTGCACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAATGCTTGAGATGGAGTaGAGTTTGGAGTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKMLEME*SLESTQ
Trigger: CTGGGTTGACTCCAAACTTCACTCCATCTCAAGCAT...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATCTGCTGTTGTGTGTTaGAAGCCACTTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKSAVVC*KPLASL
Trigger: CAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAACAAGATTGGGGAAGTaGATGGCTTGGAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKTRLGK*MAWRHL
Trigger: CAAATGCCTCCAAGCCATTCACTTCCCCAATCTTGT...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR GCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTCTGAACTGAGAAAGTaGAAGGAGACCACGGGAATG +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNSELRK*KETTGM
Trigger: CATTCCCGTGGTCTCCTTGCACTTTCTCAGTTCAGA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAGATGGAGTGAAGTTTaGAGTCAACCCAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNRWSEV*SQPSRG
Trigger: GCCTCTACTGGGTTGACTCCAAACTTCACTCCATCT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR TCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAGTTGACATCGATGCTTaGGATGGAGTGAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKVDIDA*DGVKFG
Trigger: TCCAAACTTCACTCCATCTCAAGCATCGATGTCAAC...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATATGCATTTCCCGTCTTaGCACTGGAACTCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNMHFPS*HWNSFL
Trigger: AAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCAT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATGGCAGGCAATGCTTTaGTCTTCTCTGTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKWQAML*SSLSLN
Trigger: ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CCA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAAGGATTGTGTCACGGTaGAGAGAAACTCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKRIVSR*RETQNF
Trigger: GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCT...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS CCA 90 bp GCCAGCAGCATGCCGTCCGGGCAGGCGCAGGTAAACTTGGGCGAGTaGGGGTTGATCTGCGGGGCAGGGAGGCACAGATACTGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: ASSMPSGQAQVNLGE*GLICGAGRHRYWQP
Trigger: CGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTGCCCGGACGGCATGCTGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 90 bp CCGTCCGGGCAGGCGCAGGTAAACTTGGGCGAGTGGGGGTTGATCTaGGGGGCAGGGAGGCACAGATACTGGCAGCCGCCATTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PSGQAQVNLGEWGLI*GAGRHRYWQPPLLR
Trigger: CCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTGCCCGGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS TCA 90 bp CGTCGCCCAGAGCTTGGTGAGACATTGTCACTATCTCCACCGTGGTaGGCCCAGGGGTGGCCCCAGGCAGCCGGGAGGTGTCGGGAACAG +
Preference number: 5 (lower is better)
Translates to: RRPELGETLSLSPPW*AQGWPQAAGRCREQ
Trigger: CTGTTCCCGACACCTCCCGGCTGCCTGGGGCCACCCCTGGGCTCACCACGGTGGAGATAGTGACAATGTCTCACCAAGCTCTGGGCGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 90 bp GCCCCAGGCAGCCGGGAGGTGTCGGGAACAGGTCGGGTGGTTGTGTaGTGTGTCCTTACGGCTGTGGAGCTGACCTTTAGCCTGACGGTG +
Preference number: 5 (lower is better)
Translates to: APGSREVSGTGRVVV*CVLTAVELTFSLTV
Trigger: CACCGTCAGGCTAAAGGTCAGCTCCACAGCCGTAAGGACACAGCACACAACCACCCGACCTGTTCCCGACACCTCCCGGCTGCCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 90 bp GAAGACGAGGAGCACTGTAGGGAGAGGCACGCTCTGTCACACAGCTaGCCCCGAGACCAGAGACCCAGCTCCGTGGCGATGGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: EDEEHCRERHALSHS*PRDQRPSSVAMGRT
Trigger: TGTCCTCCCCATCGCCACGGAGCTGGGTCTCTGGTCTCGGGGGCAGCTGTGTGACAGAGCGTGCCTCTCCCTACAGTGCTCCTCGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557933.5
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCCCCCTTTCTTGATCTaGGCGGGAGTTCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMPPFLI*AGVPQS
Trigger: TGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGAACAGGTCGGGTGGTaGTGTGCTGTGTCCTTACGG +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMEQVGW*CAVSLR
Trigger: CCGTAAGGACACAGCACACAACCACCCGACCTGTTC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 90 bp ATCACAGGATCACGGGGATCACGACCAGCGGGAATCACAGCGGCTTaGCAGTGTGTGTGCCAGGTGGCTAGCCCTCGGCAGGGACAGCCT +
Preference number: 5 (lower is better)
Translates to: ITGSRGSRPAGITAA*QCVCQVASPRQGQP
Trigger: AGGCTGTCCCTGCCGAGGGCTAGCCACCTGGCACACACACTGGCAAGCCGCTGTGATTCCCGCTGGTCGTGATCCCCGTGATCCTGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGTGGGAACAGCCGCCGTaGTTGTCCAAGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMWEQPP*LSKHSL
Trigger: CAACGAATGCTTGGACAACAACGGCGGCTGTTCCCA...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCATGGAGCCCACAGCCTaGCAGGCCTTCGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GPGGPVGAICCCVLKATCMEPTA*QAFVWG
Trigger: CCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCAT...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGAGATGGGATCTCGCTTaGTTGCTCAGGCCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMRWDLA*LLRPGL
Trigger: GAGACCAGGCCTGAGCAACAAAGCGAGATCCCATCT...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS TCA 90 bp TCTGAGCCGTTGTCGCAGTCCACTTGGCCATCGCACCTCCAGAACTaGGGAATGCAGCGGTTGACACGGCCCCCACAGCTGAAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SEPLSQSTWPSHLQN*GMQRLTRPPQLKSP
Trigger: CGGGGACTTCAGCTGTGGGGGCCGTGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAACGGCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000557933.5
ENST00000557958.1
ENST00000558013.5
ENST00000558518.6
CDS CCA 90 bp CCATCACAGCGCCAGCTGGAGTGGATGCACTCGCCACTTAGGCAGTaGAACTCGAAGGCCGAGCAGGGGCTACTGTCCCCTTGGAACACG +
Preference number: 5 (lower is better)
Translates to: PSQRQLEWMHSPLRQ*NSKAEQGLLSPWNT
Trigger: CGTGTTCCAAGGGGACAGTAGCCCCTGCTCGGCCTTCGAGTTCCACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560467.1
CDS CCA 90 bp TTGGGCGAGTGGGGGTTGATCTGCGGGGCAGGGAGGCACAGATACTaGCAGCCGCCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACT +
Preference number: 5 (lower is better)
Translates to: LGEWGLICGAGRHRY*QPPLLRVVLSHQFT
Trigger: AGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGCCATGTTGCAGACTTaGTCCAGGGTGATGCATTCG +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMAMLQT*SRVMHS
Trigger: CGAATGCATCACCCTGGACAAAGTCTGCAACATGGC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGTTCCTCTTCACGCCCTaGGTATCCGCAACAGAGACA +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMFLFTP*VSATET
Trigger: TGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGAA...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCCAGGCGCAGGTAAACTaGGGCGAGTGGGGGTTGATC +
Preference number: 5 (lower is better)
Translates to: EAGPGGPVGAICCCVLKAQAQVN*GEWGLI
Trigger: GATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTG...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGGAGCTTGGTGAGACATaGTCACTATCTCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMELGET*SLSPPW
Trigger: CCACGGTGGAGATAGTGACAATGTCTCACCAAGCTC...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 90 bp GGCGACAGGTGGCCACAGCGCAGTTTTCCTCGTCAGATTTGTCCTTaGAGTCGGGGCCACCATCACAGCGCCAGCTGGAGTGGATGCACT +
Preference number: 5 (lower is better)
Translates to: GDRWPQRSFPRQICP*SRGHHHSASWSGCT
Trigger: AGTGCATCCACTCCAGCTGGCGCTGTGATGGTGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAACTGCGCTGTGGCCACCTGTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560467.1
CDS CCA 90 bp CGGTCTGAGTCACAGACGAACTGCCGAGAGATGCACTTCCCATCGTaGCAGCGAAACTCGTCCTGGGAGCACGTCTTGGGGGAGCACGTC +
Preference number: 5 (lower is better)
Translates to: RSESQTNCREMHFPS*QRNSSWEHVLGEHV
Trigger: GACGTGCTCCCCCAAGACGTGCTCCCAGGACGAGTTTCGCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCAGACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535915.5
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGTCATCGCTCATGTCCTaGCAGTCATATTCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMSSLMS*QSYSRS
Trigger: TGACCGGGAATATGACTGCAAGGACATGAGCGATGA...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GAGGCAGGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCGAACAGGTCGGGTGGTaGTGTGCTGTGTCCTTACGG +
Preference number: 5 (lower is better)
Translates to: EAGPGGPVGAICCCVLKAEQVGW*CAVSLR
Trigger: CCGTAAGGACACAGCACACAACCACCCGACCTGTTC...GGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS GCA 90 bp CGTCCAAGCAGTCCCGGTCTGAGTCACAGACGAACTGCCGAGAGATaGACTTCCCATCGTGGCAGCGAAACTCGTCCTGGGAGCACGTCT +
Preference number: 5 (lower is better)
Translates to: RPSSPGLSHRRTAER*TSHRGSETRPGSTS
Trigger: AGACGTGCTCCCAGGACGAGTTTCGCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCAGACCGGGACTGCTTGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 90 bp TCGTCTGAGCCGTCCAAGCAGTCCCGGTCTGAGTCACAGACGAACTaGCGAGAGATGCACTTCCCATCGTGGCAGCGAAACTCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSEPSKQSRSESQTN*REMHFPSWQRNSSW
Trigger: CCAGGACGAGTTTCGCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCAGACCGGGACTGCTTGGACGGCTCAGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CCA 90 bp GCTCCGTGGCGATGGGGAGGACAATGGACAGAGCCCTCACGCTACTaGGCTTCTTCTCATTTCCTCTGCCAGCAACGTCGCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: APWRWGGQWTEPSRY*ASSHFLCQQRRPEL
Trigger: AAGCTCTGGGCGACGTTGCTGGCAGAGGAAATGAGAAGAAGCCCAGTAGCGTGAGGGCTCTGTCCATTGTCCTCCCCATCGCCACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557933.5
CDS-3UTR CAA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCATGGAGCCCACAGCCTaGCAGGCCTTCGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLMEPTA*QAFVWG
Trigger: CCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCAT...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 90 bp AGCACGTCTCCTGGGACTCATCAGAGCCATCCTGGCACTCAGCGCTaGCATCGCAGACCCACTTGTAGGAGATGCATTTCCCGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: STSPGTHQSHPGTQR*HRRPTCRRCISRLG
Trigger: GCCAAGACGGGAAATGCATCTCCTACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGAGTCCCAGGAGACGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000557958.1
ENST00000558013.5
ENST00000558518.6
ENST00000560502.5
CDS CCA 90 bp CGAGGAGCACGATGGGGAGGACAATGGACAGAGCCCTCACGCTACTaGGCTTCTTCTCATTTCCTCTGCCAGCAACGTCGCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: RGARWGGQWTEPSRY*ASSHFLCQQRRPEL
Trigger: AAGCTCTGGGCGACGTTGCTGGCAGAGGAAATGAGAAGAAGCCCAGTAGCGTGAGGGCTCTGTCCATTGTCCTCCCCATCGTGCTCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGAATGCAGGTGGAGCTGTaGCACTGGAAGCTGGCGGGA +
Preference number: 5 (lower is better)
Translates to: LTEAVTVSPDISATVTRRMQVEL*HWKLAG
Trigger: TCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCAT...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGACGATGGCCCTTGGCTaGGAGCCGTTCTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRTMALG*EPFSLN
Trigger: ATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGT...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CAA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGCCCCCTTTCTTGATCTaGGCGGGAGTTCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRPPFLI*AGVPQS
Trigger: TGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGG...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CAA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTCAGGCCCCCTTTCTaGATCTTGGCGGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRFRPPF*ILAGVP
Trigger: GGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAA...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGTCTGTCCAAAATACTTaGTCCTCAAAGACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMSVQNT*SSKTAK
Trigger: CTTGGCCGTCTTTGAGGACAAAGTATTTTGGACAGA...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGTCAAAGTTGATGCTGTaGATGTTCTTAAGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMSKLML*MFLSRQ
Trigger: CTGGCGGCTTAAGAACATCAACAGCATCAACTTTGA...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS TCA 90 bp CTCAATAGCAAAGGCAGGGCCACACTTACGACAGCCTTGCTCGTCTaGGCCGTTGTCGCAGTCCACTTGGCCATCGCACCTCCAGAACTG +
Preference number: 5 (lower is better)
Translates to: LNSKGRATLTTALLV*AVVAVHLAIAPPEL
Trigger: CAGTTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGTCGTAAGTGTGGCCCTGCCTTTGCTATTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS GCA 90 bp CAGATAGGCTCAATAGCAAAGGCAGGGCCACACTTACGACAGCCTTaGTCGTCTGAGCCGTTGTCGCAGTCCACTTGGCCATCGCACCTC +
Preference number: 5 (lower is better)
Translates to: QIGSIAKAGPHLRQP*SSEPLSQSTWPSHL
Trigger: GAGGTGCGATGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGTCGTAAGTGTGGCCCTGCCTTTGCTATTGAGCCTATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS-3UTR CAA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCTGCTCGTCTGAGCCGTaGTCGCAGTCCACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLCSSEP*SQSTWP
Trigger: TGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCA...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCATCGCAGTCGGGGTCGTaGTCGCAGGCCCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: PSRGKEETKIPTQAIAWASQSGS*SQAHSW
Trigger: CCAGCTGTGGGCCTGCGACAACGACCCCGACTGCGA...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGATCGCAGTCGGGGTCGTaGTCGCAGGCCCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERSQSGS*SQAHSW
Trigger: CCAGCTGTGGGCCTGCGACAACGACCCCGACTGCGA...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGGCCAGGGGGTCCCGTTGGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTGGTCCCGCACTCTTaGATGGGTTCATCTGACCAG +
Preference number: 5 (lower is better)
Translates to: GPGGPVGAICCCVLKATCLVPHS*MGSSDQ
Trigger: CTGGTCAGATGAACCCATCAAAGAGTGCGGGACCAA...GCAAGTGGCTTTCAACACACAACAGCAGATGGCACCAACGGGACCCCCTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCTTGTCCAAGCATTCGTaGGTCCCGCACTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: GSLQAPLPGFTPFSCLSLLSKHS*VPHSLM
Trigger: CATCAAAGAGTGCGGGACCAACGAATGCTTGGACAA...GAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCATGCAGGTGGAGCTGTaGCACTGGAAGCTGGCGGGA +
Preference number: 5 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCMQVEL*HWKLAG
Trigger: TCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCAT...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCCCCCCTTTCTTGATCTaGGCGGGAGTTCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: TKIPTQAIAWALSEACSAPPFLI*AGVPQS
Trigger: TGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGG...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TGGTCTCGGTGCCACCACGGATTCAGCCAGATCATTTCCGACGCCATGAATCCCTTCCGGTTGCCCCCGTaGACATCGATGCTTGAGATG +
Preference number: 5 (lower is better)
Translates to: WSRCHHGFSQIISDAMNPFRLPP*TSMLEM
Trigger: CATCTCAAGCATCGATGTCAACGGGGGCAACCGGAA...GGGATTCATGGCGTCGGAAATGATCTGGCTGAATCCGTGGTGGCACCGAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp TTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTGGAACCTGTGAGGCGGTaGGCACTGAAAATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: LLRVVLSHQFTPLGWVRLEPVRR*ALKMAS
Trigger: CGAAGCCATTTTCAGTGCCAACCGCCTCACAGGTTC...CAACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CAA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTGGCCAGGGGGTCCCGTaGGTGCCATCTGCTGTTGTG +
Preference number: 5 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVGQGVP*VPSAVV
Trigger: CACAACAGCAGATGGCACCAACGGGACCCCCTGGCC...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS GCA 90 bp TGCTGCAGATCATTCTCTGGGACAGGTCAGACCAGTAGATTCTATTaGTGGCCACCTCCGTGTCCAGAGCGACCACGTTCCTCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: CCRSFSGTGQTSRFY*WPPPCPERPRSSGW
Trigger: CCAACCTGAGGAACGTGGTCGCTCTGGACACGGAGGTGGCCAGCAATAGAATCTACTGGTCTGACCTGTCCCAGAGAATGATCTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560467.1
CDS GCA 90 bp ACCTGCAGATCATTCTCTGGGACAGGTCAGACCAGTAGATTCTATTaGTGGCCACCTCCGTGTCCAGAGCGACCACGTTCCTCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: TCRSFSGTGQTSRFY*WPPPCPERPRSSGW
Trigger: CCAACCTGAGGAACGTGGTCGCTCTGGACACGGAGGTGGCCAGCAATAGAATCTACTGGTCTGACCTGTCCCAGAGAATGATCTGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560173.1
CDS CCA 90 bp CTCATGTCCTTGCAGTCATATTCCCGGTCACACTGCCGGCTGCCATaGATGCAGTTTCCATCAGAGCACTGGAATTCGTCAGGGCGACAG +
Preference number: 5 (lower is better)
Translates to: LMSLQSYSRSHCRLP*MQFPSEHWNSSGRQ
Trigger: CTGTCGCCCTGACGAATTCCAGTGCTCTGATGGAAACTGCATCCATGGCAGCCGGCAGTGTGACCGGGAATATGACTGCAAGGACATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000558528.1
ENST00000560467.1
CDS CCA 90 bp TGCAGATCATTCTCTGGGACAGGTCAGACCAGTAGATTCTATTGCTaGCCACCTCCGTGTCCAGAGCGACCACGTTCCTCAGGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: CRSFSGTGQTSRFYC*PPPCPERPRSSGWG
Trigger: TCCCCAACCTGAGGAACGTGGTCGCTCTGGACACGGAGGTGGCCAGCAATAGAATCTACTGGTCTGACCTGTCCCAGAGAATGATCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560173.1
ENST00000560467.1
CDS-3UTR CAA 90 bp TTGACACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACGACAGAAAACTGAAGTCCCCGGATTaGCAGGTGACAGACAAGCAC +
Preference number: 5 (lower is better)
Translates to: LTRAFPGLGSHPNTHDRKLKSPD*QVTDKH
Trigger: GTGCTTGTCTGTCACCTGCAAATCCGGGGACTTCAG...TTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCATGCAGGTGGAGCTGTaGCACTGGAAGCTGGCGGGA +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSMQVEL*HWKLAG
Trigger: TCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCAT...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCTCGTCAGATTTGTCCTaGCAGTCGGGGCCACCATCA +
Preference number: 5 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLSSDLS*QSGPPS
Trigger: TGATGGTGGCCCCGACTGCAAGGACAAATCTGACGA...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCTGGGAACAGCCGCCGTaGTTGTCCAAGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLWEQPP*LSKHSL
Trigger: CAACGAATGCTTGGACAACAACGGCGGCTGTTCCCA...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCGATCTTAAGGTCATaGCAGACGTGGGAACAGCCG +
Preference number: 5 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLPILRS*QTWEQP
Trigger: CGGCTGTTCCCACGTCTGCAATGACCTTAAGATCGG...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGCCACTGCGCCCGGCCTCACCGTGCATGTTTTAAACACATACCCATCAACGACCCGATCTTAAGGTCATaGCAGACGTGGGAACAGCCG +
Preference number: 5 (lower is better)
Translates to: SHCARPHRACFKHIPINDPILRS*QTWEQP
Trigger: CGGCTGTTCCCACGTCTGCAATGACCTTAAGATCGG...GTCGTTGATGGGTATGTGTTTAAAACATGCACGGTGAGGCCGGGCGCAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTATGGAGCCCACAGCCTaGCAGGCCTTCGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRMEPTA*QAFVWG
Trigger: CCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCAT...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAATGGAGCCCACAGCCTaGCAGGCCTTCGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKMEPTA*QAFVWG
Trigger: CCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCAT...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp TTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTGTTCCTCTTCACGCCCTaGGTATCCGCAACAGAGACA +
Preference number: 5 (lower is better)
Translates to: LLRVVLSHQFTPLGWVRLFLFTP*VSATET
Trigger: TGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGAA...CAACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CAA 90 bp GGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCCTGACATCACGATGGCCCTTGGCTaGGAGCCGTTCTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: GAICCCVLKATCFSGPDITMALG*EPFSLN
Trigger: ATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGT...GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCTTCAGGCCCCCTTTCTaGATCTTGGCGGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCFRPPF*ILAGVP
Trigger: GGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAA...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTTTCCGGTTGCCCCCGTaGACATCGATGCTTGAGATG +
Preference number: 5 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPFRLPP*TSMLEM
Trigger: CATCTCAAGCATCGATGTCAACGGGGGCAACCGGAA...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCCGGCGAGGTCTCAGGAAGGGTTCTGGGCAGGGACGGGACTCCAGGCAGATGCTGAAAATGGCTTCGTaGATGATATCTGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: GRRGLRKGSGQGRDSRQMLKMAS*MISVQN
Trigger: ATTTTGGACAGATATCATCAACGAAGCCATTTTCAG...CATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTTCCTGAGACCTCGCCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCGAACCTGTGAGGCGGTaGGCACTGAAAATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLEPVRR*ALKMAS
Trigger: CGAAGCCATTTTCAGTGCCAACCGCCTCACAGGTTC...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTTACTGGCAGCCGCCATaGCTCAGGGTGGTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPYWQPP*LRVVLS
Trigger: TGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTA...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTACTGGCAGCCGCCATaGCTCAGGGTGGTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFYWQPP*LRVVLS
Trigger: TGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTCAGGCGCAGGTAAACTaGGGCGAGTGGGGGTTGATC +
Preference number: 5 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPQAQVN*GEWGLI
Trigger: GATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTG...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGGCCAGGGGGTCCCGTaGGTGCCATCTGCTGTTGTG +
Preference number: 5 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPGQGVP*VPSAVV
Trigger: CACAACAGCAGATGGCACCAACGGGACCCCCTGGCC...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCTGTCCCCGGCATTCATaGACACGGGCTTTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSCPRHS*TRAFPG
Trigger: GCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGACA...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTTCACGATCACGGCTTaGAAGTCCCGGTCAACCTGC +
Preference number: 5 (lower is better)
Translates to: TKIPTQAIAWALSEACSAFTITA*KSRSTC
Trigger: GCAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAA...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGTTCTCCCAAAAAGCGTaGCACACAGTCCAGTTCGTG +
Preference number: 5 (lower is better)
Translates to: PTQAIAWALSEACSASQMFSQKA*HTVQFV
Trigger: CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAA...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS TCA 90 bp GAACAGGATCCACCACGATGGCCCTTGGCTTGGAGCCGTTCTCCCTaGATAACGTTTTCCTCTTCACGCCCTTGGTATCCGCAACAGAGA +
Preference number: 5 (lower is better)
Translates to: EQDPPRWPLAWSRSP*ITFSSSRPWYPQQR
Trigger: TCTCTGTTGCGGATACCAAGGGCGTGAAGAGGAAAACGTTATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTGGATCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000559340.1
CDS TCA 90 bp ATCCTCCAAGATGGTCTTCCGGTTGCCCCCGTTGACATCGATGCTTaGGATGGAGTGAAGTTTGGAGTCAACCCAGTAGAGGCGGCCACT +
Preference number: 5 (lower is better)
Translates to: ILQDGLPVAPVDIDA*DGVKFGVNPVEAAT
Trigger: AGTGGCCGCCTCTACTGGGTTGACTCCAAACTTCACTCCATCTCAAGCATCGATGTCAACGGGGGCAACCGGAAGACCATCTTGGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS TCA 90 bp CTAGCCATGTTGCAGACTTTGTCCAGGGTGATGCATTCGCCGCTGTaGCACTTGAACTTGTTGGGTCCCTCGCAGAGTGTCAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: LAMLQTLSRVMHSPL*HLNLLGPSQSVRQP
Trigger: AGGCTGTCTGACACTCTGCGAGGGACCCAACAAGTTCAAGTGTCACAGCGGCGAATGCATCACCCTGGACAAAGTCTGCAACATGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455727.6
CDS GCA 90 bp CATCCTGGCACTCAGCGCTGCCATCGCAGACCCACTTGTAGGAGATaGATTTCCCGTCTTGGCACTGGAACTCGTTTCTTTCGCATCTGT +
Preference number: 5 (lower is better)
Translates to: HPGTQRCHRRPTCRR*ISRLGTGTRFFRIC
Trigger: ACAGATGCGAAAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATCTCCTACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000557958.1
ENST00000558013.5
ENST00000558518.6
ENST00000560502.5
CDS-3UTR CAA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCGTTGTCGCAGTCCACTaGGCCATCGCACCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFVVAVH*AIAPPE
Trigger: TTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAAC...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATCGCAGTCGGGGTCGTaGTCGCAGGCCCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: VSLILHEERKKPKSQPKPSQSGS*SQAHSW
Trigger: CCAGCTGTGGGCCTGCGACAACGACCCCGACTGCGA...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTGCCATGTTGCAGACTTaGTCCAGGGTGATGCATTCG +
Preference number: 5 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPAMLQT*SRVMHS
Trigger: CGAATGCATCACCCTGGACAAAGTCTGCAACATGGC...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTACCACGTTCCTCAGGTaGGGGATGAGGCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: ETKIPTQAIAWALSEACSTTFLR*GMRLVY
Trigger: GTACACCAGCCTCATCCCCAACCTGAGGAACGTGGT...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCACCACGTTCCTCAGGTaGGGGATGAGGCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFTTFLR*GMRLVY
Trigger: GTACACCAGCCTCATCCCCAACCTGAGGAACGTGGT...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCCCCCCTTTCTTGATCTaGGCGGGAGTTCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSPPFLI*AGVPQS
Trigger: TGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGG...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCTTCAGGCCCCCTTTCTaGATCTTGGCGGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSFRPPF*ILAGVP
Trigger: GGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAA...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTTTCAGCCAACAAGTaGACATCGGAACCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: PLLRVVLSHQFTPLGWVRFSANK*TSEPVR
Trigger: CCTCACAGGTTCCGATGTCAACTTGTTGGCTGAAAA...CCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CAA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGACAGGCGCAGGTAAACTaGGGCGAGTGGGGGTTGATC +
Preference number: 5 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERQAQVN*GEWGLI
Trigger: GATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTG...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAACAGGTCGGGTGGTaGTGTGCTGTGTCCTTACGG +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSEQVGW*CAVSLR
Trigger: CCGTAAGGACACAGCACACAACCACCCGACCTGTTC...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCATGTCCCCGGCATTCATaGACACGGGCTTTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: PSRGKEETKIPTQAIAWACPRHS*TRAFPG
Trigger: GCCAGGGAAAGCCCGTGTCAATGAATGCCGGGGACA...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGATGGCTTGGAGGCATTaGCATAGAAGTGGAAGCACT +
Preference number: 5 (lower is better)
Translates to: PTQAIAWALSEACSASQMMAWRH*HRSGST
Trigger: AGTGCTTCCACTTCTATGCAAATGCCTCCAAGCCAT...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGGGGGACACAGTGTTTaGTCCCTGGGGACAATTGCC +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSGGHSV*SLGTIA
Trigger: GGCAATTGTCCCCAGGGACAAAACACTGTGTCCCCC...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS TCA 90 bp GTTGTCCAAGCATTCGTTGGTCCCGCACTCTTTGATGGGTTCATCTaGCCAGTCCCGGCAGTCTCTAGCCATGTTGCAGACTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: VVQAFVGPALFDGFI*PVPAVSSHVADFVQ
Trigger: CTGGACAAAGTCTGCAACATGGCTAGAGACTGCCGGGACTGGTCAGATGAACCCATCAAAGAGTGCGGGACCAACGAATGCTTGGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS TCA 90 bp TGGCAGAACTTTCTGGCTTTTCCCCCTTCATGTTACGTGGGTCATTaGGGCTTGGCTAGCAAGCGTCACTATGTGTTCAGCCTCACGGGG +
Preference number: 5 (lower is better)
Translates to: WQNFLAFPPSCYVGH*GLASKRHYVFSLTG
Trigger: CCCCGTGAGGCTGAACACATAGTGACGCTTGCTAGCCAAGCCTCAATGACCCACGTAACATGAAGGGGGAAAAGCCAGAAAGTTCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS-3UTR CAA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAGTTGTCGCAGTCCACTaGGCCATCGCACCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERVVAVH*AIAPPE
Trigger: TTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAAC...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTCGCAGTCGGGGTCGTaGTCGCAGGCCCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: FSYPSRGKEETKIPTQAISQSGS*SQAHSW
Trigger: CCAGCTGTGGGCCTGCGACAACGACCCCGACTGCGA...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTGACACGGGCTTTCCCTGGCCTGGGATCCCATCCCAACACACACGACAGAAAATCATCGCTCATGTCCTaGCAGTCATATTCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: LTRAFPGLGSHPNTHDRKSSLMS*QSYSRS
Trigger: TGACCGGGAATATGACTGCAAGGACATGAGCGATGA...TTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCCAGGGAAAGCCCGTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCTTGTCCAAGCATTCGTaGGTCCCGCACTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLLSKHS*VPHSLM
Trigger: CATCAAAGAGTGCGGGACCAACGAATGCTTGGACAA...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTTGGGAACAGCCGCCGTaGTTGTCCAAGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPWEQPP*LSKHSL
Trigger: CAACGAATGCTTGGACAACAACGGCGGCTGTTCCCA...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCCCGATCTTAAGGTCATaGCAGACGTGGGAACAGCCG +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSPILRS*QTWEQP
Trigger: CGGCTGTTCCCACGTCTGCAATGACCTTAAGATCGG...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCTTCCTCTTCACGCCCTaGGTATCCGCAACAGAGACA +
Preference number: 5 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCFLFTP*VSATET
Trigger: TGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGAA...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTACGATGGCCCTTGGCTaGGAGCCGTTCTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVTMALG*EPFSLN
Trigger: ATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGT...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCCCCCTTTCTTGATCTaGGCGGGAGTTCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVPPFLI*AGVPQS
Trigger: TGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGG...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCAAGATGGTCTTCCGGTaGCCCCCGTTGACATCGATG +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSKMVFR*PPLTSM
Trigger: CATCGATGTCAACGGGGGCAACCGGAAGACCATCTT...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTAAGATGGTCTTCCGGTaGCCCCCGTTGACATCGATG +
Preference number: 5 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPKMVFR*PPLTSM
Trigger: CATCGATGTCAACGGGGGCAACCGGAAGACCATCTT...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAATACTGGCAGCCGCCATaGCTCAGGGTGGTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: PGPVSLILHEERKKPKSQYWQPP*LRVVLS
Trigger: TGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTA...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTTACTGGCAGCCGCCATaGCTCAGGGTGGTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPYWQPP*LRVVLS
Trigger: TGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTA...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTGAACAGGTCGGGTGGTaGTGTGCTGTGTCCTTACGG +
Preference number: 5 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVEQVGW*CAVSLR
Trigger: CCGTAAGGACACAGCACACAACCACCCGACCTGTTC...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGTCAAAGTTGATGCTGTaGATGTTCTTAAGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: PTQAIAWALSEACSASQMSKLML*MFLSRQ
Trigger: CTGGCGGCTTAAGAACATCAACAGCATCAACTTTGA...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGATCTGCTGTTGTGTGTaGAAAGCCACTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PTQAIAWALSEACSASQMICCCV*KATCFS
Trigger: AGAGAAGCAAGTGGCTTTCAACACACAACAGCAGAT...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTGGTGCCATCTGCTGTaGTGTGTTGAAAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: TKIPTQAIAWALSEACSAWCHLL*CVESHL
Trigger: CAAGTGGCTTTCAACACACAACAGCAGATGGCACCA...GGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGGCCAGGGGGTCCCGTaGGTGCCATCTGCTGTTGTG +
Preference number: 5 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQGQGVP*VPSAVV
Trigger: CACAACAGCAGATGGCACCAACGGGACCCCCTGGCC...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGAATGGCTTGGAGGCATTaGCATAGAAGTGGAAGCACT +
Preference number: 5 (lower is better)
Translates to: LTEAVTVSPDISATVTRRMAWRH*HRSGST
Trigger: AGTGCTTCCACTTCTATGCAAATGCCTCCAAGCCAT...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CTGACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGATGGGATCTCGCTTaGTTGCTCAGGCCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LTSPPLSSSMFEDCVTVERWDLA*LLRPGL
Trigger: GAGACCAGGCCTGAGCAACAAAGCGAGATCCCATCT...CTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS TCA 90 bp CTAGCCATGTTGCAGACTTTGTCCAGGGTGATGCATTCGCCGCTGTaGCACTTGAACTTGTTGGGTCCCTCGCAGAGTGTCACATTAACG +
Preference number: 5 (lower is better)
Translates to: LAMLQTLSRVMHSPL*HLNLLGPSQSVTLT
Trigger: CGTTAATGTGACACTCTGCGAGGGACCCAACAAGTTCAAGTGTCACAGCGGCGAATGCATCACCCTGGACAAAGTCTGCAACATGGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000558528.1
ENST00000560467.1
CDS TCA 90 bp CCAGCCTCTTTTCATCCTCCAAGATGGTCTTCCGGTTGCCCCCGTTaGCATCGATGCTTGAGATGGAGTGAAGTTTGGAGTCAACCCAGT +
Preference number: 5 (lower is better)
Translates to: PASFHPPRWSSGCPR*HRCLRWSEVWSQPS
Trigger: ACTGGGTTGACTCCAAACTTCACTCCATCTCAAGCATCGATGTCAACGGGGGCAACCGGAAGACCATCTTGGAGGATGAAAAGAGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS TCA 90 bp GGGATCCTGACACTCATCGATATCGCACTCTTTGATGGGTTCATCTaGCCAGTCCCGGCAGTCTCTAGCCATGTTGCAGACTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: GILTLIDIALFDGFI*PVPAVSSHVADFVQ
Trigger: CTGGACAAAGTCTGCAACATGGCTAGAGACTGCCGGGACTGGTCAGATGAACCCATCAAAGAGTGCGATATCGATGAGTGTCAGGATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560467.1
CDS-3UTR CAA 90 bp CATACAACGGGGACATCATTCTCCCAAAAAGCGTTGCACACAGTCCAGTTCGTGTCGTCAGATTTGTCCTaGCAGTCGGGGCCACCATCA +
Preference number: 5 (lower is better)
Translates to: HTTGTSFSQKALHTVQFVSSDLS*QSGPPS
Trigger: TGATGGTGGCCCCGACTGCAAGGACAAATCTGACGA...CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCTTTTCCTCGTCAGATTaGTCCTTGCAGTCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSFSSSD*SLQSGP
Trigger: TGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAA...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCTCATCGCTCATGTCCTaGCAGTCATATTCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCSSLMS*QSYSRS
Trigger: TGACCGGGAATATGACTGCAAGGACATGAGCGATGA...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTTGGTCCCGCACTCTTaGATGGGTTCATCTGACCAG +
Preference number: 5 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFLVPHS*MGSSDQ
Trigger: CTGGTCAGATGAACCCATCAAAGAGTGCGGGACCAA...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTTTGGTCCCGCACTCTTaGATGGGTTCATCTGACCAG +
Preference number: 5 (lower is better)
Translates to: ETKIPTQAIAWALSEACSLVPHS*MGSSDQ
Trigger: CTGGTCAGATGAACCCATCAAAGAGTGCGGGACCAA...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGATGGGAACAGCCGCCGTaGTTGTCCAAGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERWEQPP*LSKHSL
Trigger: CAACGAATGCTTGGACAACAACGGCGGCTGTTCCCA...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTATGGAGCCCACAGCCTaGCAGGCCTTCGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIMEPTA*QAFVWG
Trigger: CCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCAT...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAAACCACGTTCCTCAGGTaGGGGATGAGGCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: PGPVSLILHEERKKPKSQTTFLR*GMRLVY
Trigger: GTACACCAGCCTCATCCCCAACCTGAGGAACGTGGT...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTTTCCTCTTCACGCCCTaGGTATCCGCAACAGAGACA +
Preference number: 5 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPFLFTP*VSATET
Trigger: TGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGAA...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTTTTTCAGCCAACAAGTaGACATCGGAACCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: PKSQPKPLHGHCPKPVLPFSANK*TSEPVR
Trigger: CCTCACAGGTTCCGATGTCAACTTGTTGGCTGAAAA...AGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCAACGTCGCCCAGAGCTaGGTGAGACATTGTCACTAT +
Preference number: 5 (lower is better)
Translates to: NQNPNPSHCMGTVRSLFCNVAQS*VRHCHY
Trigger: ATAGTGACAATGTCTCACCAAGCTCTGGGCGACGTT...GCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTGACGGAGGCTGTCACTGTCTCTCCGGACATCAGTGCAACAGTAACACGGCGATCAAAGTTGATGCTGTaGATGTTCTTAAGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: LTEAVTVSPDISATVTRRSKLML*MFLSRQ
Trigger: CTGGCGGCTTAAGAACATCAACAGCATCAACTTTGA...TCGCCGTGTTACTGTTGCACTGATGTCCGGAGAGACAGTGACAGCCTCCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCTGGTCTTCTCTGTCTTaGAATAAAACAAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: QNPNPSHCMGTVRSLFCLWSSLS*NKTRPA
Trigger: CGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACCA...GAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCATTCACGATCACGGCTTaGAAGTCCCGGTCAACCTGC +
Preference number: 5 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAFTITA*KSRSTC
Trigger: GCAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAA...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCCTGGGAGCACGTCTaGGGGGAGCACGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHSWEHV*GEHVSW
Trigger: CCAGGAGACGTGCTCCCCCAAGACGTGCTCCCAGGA...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535915.5
CDS CCA 90 bp GGATGCAGTTTCCATCAGAGCACTGGAATTCGTCAGGGCGACAGGTaGCCACAGCTGGAAAACAGGACAGAGTGTGTTGATTTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: GCSFHQSTGIRQGDR*PQLENRTECVDFLK
Trigger: CTTGAGAAAATCAACACACTCTGTCCTGTTTTCCAGCTGTGGCCACCTGTCGCCCTGACGAATTCCAGTGCTCTGATGGAAACTGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558528.1
CDS-3UTR CAA 90 bp AGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCGATGCATTTCCCGTCTaGGCACTGGAACTCGTTTCT +
Preference number: 5 (lower is better)
Translates to: RNQNPNPSHCMGTVRSLFDAFPV*ALELVS
Trigger: AGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATC...GAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATTGCTCGTCTGAGCCGTaGTCGCAGTCCACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: LILHEERKKPKSQPKPLHCSSEP*SQSTWP
Trigger: TGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCA...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATGCTCGTCTGAGCCGTaGTCGCAGTCCACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKCSSEP*SQSTWP
Trigger: TGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGCTCGTCTGAGCCGTaGTCGCAGTCCACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: SYPSRGKEETKIPTQAIACSSEP*SQSTWP
Trigger: TGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGAATGCAGGTGGAGCTGTaGCACTGGAAGCTGGCGGGA +
Preference number: 5 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGMQVEL*HWKLAG
Trigger: TCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCAT...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGATTTTCCTCGTCAGATTaGTCCTTGCAGTCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERFSSSD*SLQSGP
Trigger: TGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAA...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCAGCCATGTTGCAGACTTaGTCCAGGGTGATGCATTCG +
Preference number: 5 (lower is better)
Translates to: PSRGKEETKIPTQAIAWAAMLQT*SRVMHS
Trigger: CGAATGCATCACCCTGGACAAAGTCTGCAACATGGC...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGGCCATGTTGCAGACTTaGTCCAGGGTGATGCATTCG +
Preference number: 5 (lower is better)
Translates to: TWLSSKACIEEVNTLTPEAMLQT*SRVMHS
Trigger: CGAATGCATCACCCTGGACAAAGTCTGCAACATGGC...CTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCAGTCTCTAGCCATGTaGCAGACTTTGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVQSLAM*QTLSRV
Trigger: CACCCTGGACAAAGTCTGCAACATGGCTAGAGACTG...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTGGTCCCGCACTCTTaGATGGGTTCATCTGACCAG +
Preference number: 5 (lower is better)
Translates to: TWLSSKACIEEVNTLTPELVPHS*MGSSDQ
Trigger: CTGGTCAGATGAACCCATCAAAGAGTGCGGGACCAA...CTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCTTGTCCAAGCATTCGTaGGTCCCGCACTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSLSKHS*VPHSLM
Trigger: CATCAAAGAGTGCGGGACCAACGAATGCTTGGACAA...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGAACAGCCGCCGTTGTaGTCCAAGCATTCGTTGGTC +
Preference number: 5 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTEQPPL*SKHSLV
Trigger: GACCAACGAATGCTTGGACAACAACGGCGGCTGTTC...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCGATCTTAAGGTCATaGCAGACGTGGGAACAGCCG +
Preference number: 5 (lower is better)
Translates to: PGPVSLILHEERKKPKSQPILRS*QTWEQP
Trigger: CGGCTGTTCCCACGTCTGCAATGACCTTAAGATCGG...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGATTCCTCTTCACGCCCTaGGTATCCGCAACAGAGACA +
Preference number: 5 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERFLFTP*VSATET
Trigger: TGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGAA...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTAAGATGGTCTTCCGGTaGCCCCCGTTGACATCGATG +
Preference number: 5 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTKMVFR*PPLTSM
Trigger: CATCGATGTCAACGGGGGCAACCGGAAGACCATCTT...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGAAAGCAGTGGCATAATCATAGCTCACGACAGCCTCAAATGCCTGAGCTCAAAAAGATGGTCTTCCGGTaGCCCCCGTTGACATCGATG +
Preference number: 5 (lower is better)
Translates to: GKQWHNHSSRQPQMPELKKMVFR*PPLTSM
Trigger: CATCGATGTCAACGGGGGCAACCGGAAGACCATCTT...TTTGAGCTCAGGCATTTGAGGCTGTCGTGAGCTATGATTATGCCACTGCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGAACCTGTGAGGCGGTaGGCACTGAAAATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTEPVRR*ALKMAS
Trigger: CGAAGCCATTTTCAGTGCCAACCGCCTCACAGGTTC...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTGAGCTTGGTGAGACATaGTCACTATCTCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVELGET*SLSPPW
Trigger: CCACGGTGGAGATAGTGACAATGTCTCACCAAGCTC...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTAACGTCGCCCAGAGCTaGGTGAGACATTGTCACTAT +
Preference number: 5 (lower is better)
Translates to: ETKIPTQAIAWALSEACSNVAQS*VRHCHY
Trigger: ATAGTGACAATGTCTCACCAAGCTCTGGGCGACGTT...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGGCATTTCAGAGGCAATAACCCCCTACACAGGGCCCCGAGAATAGTCACTGAATGGTGCCATCTGCTGTaGTGTGTTGAAAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: RHFRGNNPLHRAPRIVTEWCHLL*CVESHL
Trigger: CAAGTGGCTTTCAACACACAACAGCAGATGGCACCA...TTCAGTGACTATTCTCGGGGCCCTGTGTAGGGGGTTATTGCCTCTGAAATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp GAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTTTCTCCCAAAAAGCGTaGCACACAGTCCAGTTCGTG +
Preference number: 5 (lower is better)
Translates to: ETKIPTQAIAWALSEACSFSQKA*HTVQFV
Trigger: CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAA...AGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS GCA 90 bp ATCCTCCTGCCTCAGCCTCACATTGATGAGTCTTTAGGGGAGGGCTaGAGAGGCTTTTATTCTAGGTGGTTGACAAGGTTGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: ILLPQPHIDESLGEG*RGFYSRWLTRLQVK
Trigger: TTTCACCTGCAACCTTGTCAACCACCTAGAATAAAAGCCTCTGCAGCCCTCCCCTAAAGACTCATCAATGTGAGGCTGAGGCAGGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560628.1
CDS CCA 90 bp CAGCTTCAAAGTCCATTTCCCTTCGGGATTCTTGGCCTTGCTCCTTaGCAGAACTTTCTGGCTTTTCCCCCTTCATGTTACGTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: QLQSPFPFGILGLAP*QNFLAFPPSCYVGH
Trigger: ATGACCCACGTAACATGAAGGGGGAAAAGCCAGAAAGTTCTGCCAAGGAGCAAGGCCAAGAATCCCGAAGGGAAATGGACTTTGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS-3UTR CAA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGGATGCATTTCCCGTCTaGGCACTGGAACTCGTTTCT +
Preference number: 5 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLDAFPV*ALELVS
Trigger: AGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATC...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAGTTGTCGCAGTCCACTaGGCCATCGCACCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAVVAVH*AIAPPE
Trigger: TTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAAC...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCTCGTCTGAGCCGTaGTCGCAGTCCACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHCSSEP*SQSTWP
Trigger: TGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCA...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTTCATCGCTCATGTCCTaGCAGTCATATTCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: KKPKSQPKPLHGHCPKPVSSLMS*QSYSRS
Trigger: TGACCGGGAATATGACTGCAAGGACATGAGCGATGA...AACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGCCATGTTGCAGACTTaGTCCAGGGTGATGCATTCG +
Preference number: 5 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTAMLQT*SRVMHS
Trigger: CGAATGCATCACCCTGGACAAAGTCTGCAACATGGC...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCCGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAAGCCATGTTGCAGACTTaGTCCAGGGTGATGCATTCG +
Preference number: 5 (lower is better)
Translates to: PGPVSLILHEERKKPKSQAMLQT*SRVMHS
Trigger: CGAATGCATCACCCTGGACAAAGTCTGCAACATGGC...TTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTCAGTCTCTAGCCATGTaGCAGACTTTGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPQSLAM*QTLSRV
Trigger: CACCCTGGACAAAGTCTGCAACATGGCTAGAGACTG...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCCTGGGATCCCATCCCAACACACACGACAGAAAACAGTGCAAAATAATAACAGAACAGCCGCCGTTGTaGTCCAAGCATTCGTTGGTC +
Preference number: 5 (lower is better)
Translates to: GLGSHPNTHDRKQCKIITEQPPL*SKHSLV
Trigger: GACCAACGAATGCTTGGACAACAACGGCGGCTGTTC...TGTTATTATTTTGCACTGTTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAACGATGGCCCTTGGCTaGGAGCCGTTCTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQTMALG*EPFSLN
Trigger: ATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGT...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAACCCCCTTTCTTGATCTaGGCGGGAGTTCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQPPFLI*AGVPQS
Trigger: TGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGG...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACCCCCTTTCTTGATCTaGGCGGGAGTTCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKPPFLI*AGVPQS
Trigger: TGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCTTCAGGCCCCCTTTCTaGATCTTGGCGGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAFRPPF*ILAGVP
Trigger: GGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAA...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGTGCCATCTGCTGTTGTGTGTTGAAAGCCACTTGCTTCTCTGGGCCTGACATCTCTGTCCAAAATACTTaGTCCTCAAAGACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: GAICCCVLKATCFSGPDISVQNT*SSKTAK
Trigger: CTTGGCCGTCTTTGAGGACAAAGTATTTTGGACAGA...GATGTCAGGCCCAGAGAAGCAAGTGGCTTTCAACACACAACAGCAGATGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGCTGAAAATGGCTTCGTaGATGATATCTGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: PTQAIAWALSEACSASQMLKMAS*MISVQN
Trigger: ATTTTGGACAGATATCATCAACGAAGCCATTTTCAG...CATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGAACAGGTCGGGTGGTaGTGTGCTGTGTCCTTACGG +
Preference number: 5 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQEQVGW*CAVSLR
Trigger: CCGTAAGGACACAGCACACAACCACCCGACCTGTTC...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAGAACAGGTCGGGTGGTaGTGTGCTGTGTCCTTACGG +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKEQVGW*CAVSLR
Trigger: CCGTAAGGACACAGCACACAACCACCCGACCTGTTC...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGAGCTTGGTGAGACATaGTCACTATCTCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: FTRKGRNQNPNPSHCMGTELGET*SLSPPW
Trigger: CCACGGTGGAGATAGTGACAATGTCTCACCAAGCTC...AGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTGGTGCCATCTGCTGTaGTGTGTTGAAAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: TWLSSKACIEEVNTLTPEWCHLL*CVESHL
Trigger: CAAGTGGCTTTCAACACACAACAGCAGATGGCACCA...CTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGAGGTAAACACGTaGACTCCTGAGTTTAGGGGT +
Preference number: 5 (lower is better)
Translates to: RGKEETKIPTQAIAWALSEEVNT*TPEFRG
Trigger: ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTC...GGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTGACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGGGGAAGTGGCATCATTaGGTGAATGAGTTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LTSPPLSSSMFEDCVTVEGKWHH*VNEFGL
Trigger: GAGACCAAACTCATTCACCAAATGATGCCACTTCCC...CTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGGGACACAGTGTTTaGTCCCTGGGGACAATTGCC +
Preference number: 5 (lower is better)
Translates to: LILHEERKKPKSQPKPLHGGHSV*SLGTIA
Trigger: GGCAATTGTCCCCAGGGACAAAACACTGTGTCCCCC...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS GCA 90 bp ATGAGCCACTGCACCTGGCCGCTTGCTGGAGATTTTATAGAATGGTaGTTGTGCTGTGCGCTGAAGAGGGCTTTGTGCAGTACTTATAAT +
Preference number: 5 (lower is better)
Translates to: MSHCTWPLAGDFIEW*LCCALKRALCSTYN
Trigger: ATTATAAGTACTGCACAAAGCCCTCTTCAGCGCACAGCACAAGCACCATTCTATAAAATCTCCAGCAAGCGGCCAGGTGCAGTGGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS-3UTR CAA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGTTGTCGCAGTCCACTaGGCCATCGCACCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIVVAVH*AIAPPE
Trigger: TTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAAC...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATTCGTCAGATTTGTCCTaGCAGTCGGGGCCACCATCA +
Preference number: 5 (lower is better)
Translates to: LILHEERKKPKSQPKPLHSSDLS*QSGPPS
Trigger: TGATGGTGGCCCCGACTGCAAGGACAAATCTGACGA...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAGAACAGCCGCCGTTGTaGTCCAAGCATTCGTTGGTC +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKEQPPL*SKHSLV
Trigger: GACCAACGAATGCTTGGACAACAACGGCGGCTGTTC...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGAGAACAGCCGCCGTTGTaGTCCAAGCATTCGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGEQPPL*SKHSLV
Trigger: GACCAACGAATGCTTGGACAACAACGGCGGCTGTTC...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCACCGATCTTAAGGTCATaGCAGACGTGGGAACAGCCG +
Preference number: 5 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAPILRS*QTWEQP
Trigger: CGGCTGTTCCCACGTCTGCAATGACCTTAAGATCGG...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAATGGAGCCCACAGCCTaGCAGGCCTTCGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKMEPTA*QAFVWG
Trigger: CCCCCACACGAAGGCCTGCAAGGCTGTGGGCTCCAT...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATACCACGTTCCTCAGGTaGGGGATGAGGCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHTTFLR*GMRLVY
Trigger: GTACACCAGCCTCATCCCCAACCTGAGGAACGTGGT...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTACGATGGCCCTTGGCTaGGAGCCGTTCTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: FSYPSRGKEETKIPTQAITMALG*EPFSLN
Trigger: ATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGT...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATACGATGGCCCTTGGCTaGGAGCCGTTCTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHTMALG*EPFSLN
Trigger: ATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGT...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTCCGGTTGCCCCCGTaGACATCGATGCTTGAGATG +
Preference number: 5 (lower is better)
Translates to: VSLILHEERKKPKSQPKPFRLPP*TSMLEM
Trigger: CATCTCAAGCATCGATGTCAACGGGGGCAACCGGAA...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAAAGATGGTCTTCCGGTaGCCCCCGTTGACATCGATG +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKKMVFR*PPLTSM
Trigger: CATCGATGTCAACGGGGGCAACCGGAAGACCATCTT...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAGAACCTGTGAGGCGGTaGGCACTGAAAATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKEPVRR*ALKMAS
Trigger: CGAAGCCATTTTCAGTGCCAACCGCCTCACAGGTTC...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGAACCTGTGAGGCGGTaGGCACTGAAAATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQEPVRR*ALKMAS
Trigger: CGAAGCCATTTTCAGTGCCAACCGCCTCACAGGTTC...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTAACGTCGCCCAGAGCTaGGTGAGACATTGTCACTAT +
Preference number: 5 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPNVAQS*VRHCHY
Trigger: ATAGTGACAATGTCTCACCAAGCTCTGGGCGACGTT...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp AGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGTCCGAAGCCTTCAAAGTTGATGCTGTaGATGTTCTTAAGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: RKKPKSQPKPLHGHCPKPSKLML*MFLSRQ
Trigger: CTGGCGGCTTAAGAACATCAACAGCATCAACTTTGA...AGGCTTCGGACAGTGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CATACAACGGGGACATCATTCTCCCAAAAAGCGTTGCACACAGTCCAGTTCGTGGAAGAGGTAAACACGTaGACTCCTGAGTTTAGGGGT +
Preference number: 5 (lower is better)
Translates to: HTTGTSFSQKALHTVQFVEEVNT*TPEFRG
Trigger: ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTC...CACGAACTGGACTGTGTGCAACGCTTTTTGGGAGAATGATGTCCCCGTTGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS CCA 90 bp GAGCTAACTTGCAATTTTCTATCAGCCGAGGTGTCTGATGATAGCTaGGAGCAGGAAGATAAGGAGTTATTTACGCAGGAGGGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: ELTCNFLSAEVSDDS*EQEDKELFTQEGCV
Trigger: CACACAGCCCTCCTGCGTAAATAACTCCTTATCTTCCTGCTCCCAGCTATCATCAGACACCTCGGCTGATAGAAAATTGCAAGTTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS-3UTR CAA 90 bp TCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGATTTTCCTCGTCAGATTaGTCCTTGCAGTCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SSMFEDCVTVERNSKLPGFSSSD*SLQSGP
Trigger: TGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAA...TCCAGGAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCAGTCTCTAGCCATGTaGCAGACTTTGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LILHEERKKPKSQPKPLHQSLAM*QTLSRV
Trigger: CACCCTGGACAAAGTCTGCAACATGGCTAGAGACTG...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATTGGTCCCGCACTCTTaGATGGGTTCATCTGACCAG +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKLVPHS*MGSSDQ
Trigger: CTGGTCAGATGAACCCATCAAAGAGTGCGGGACCAA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGAACAGCCGCCGTTGTaGTCCAAGCATTCGTTGGTC +
Preference number: 5 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHEQPPL*SKHSLV
Trigger: GACCAACGAATGCTTGGACAACAACGGCGGCTGTTC...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTGGGAACAGCCGCCGTaGTTGTCCAAGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIWEQPP*LSKHSL
Trigger: CAACGAATGCTTGGACAACAACGGCGGCTGTTCCCA...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATTCCTCTTCACGCCCTaGGTATCCGCAACAGAGACA +
Preference number: 5 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAFLFTP*VSATET
Trigger: TGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGAA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTTCCGGTTGCCCCCGTaGACATCGATGCTTGAGATG +
Preference number: 5 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIFRLPP*TSMLEM
Trigger: CATCTCAAGCATCGATGTCAACGGGGGCAACCGGAA...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACATCCCCTCCCCTTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGATCTGTCCAAAATACTTaGTCCTCAAAGACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: TSPPLSSSMFEDCVTVERSVQNT*SSKTAK
Trigger: CTTGGCCGTCTTTGAGGACAAAGTATTTTGGACAGA...TCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAAGGGGAGGGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ACAATGGCAGTTCTCGATATTCACGATCACGGCTTTGAAGTCCCGGTCAACCTGTCTGTCCAAAATACTTaGTCCTCAAAGACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: TMAVLDIHDHGFEVPVNLSVQNT*SSKTAK
Trigger: CTTGGCCGTCTTTGAGGACAAAGTATTTTGGACAGA...CAGGTTGACCGGGACTTCAAAGCCGTGATCGTGAATATCGAGAACTGCCATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp ATTGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGGTGAGGTTCTGAAAATGGCTTCGTaGATGATATCTGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: IAQGGPLTPVHSSWLGEVLKMAS*MISVQN
Trigger: ATTTTGGACAGATATCATCAACGAAGCCATTTTCAG...AACCTCACCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559340.1
CDS-3UTR CAA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATGAACCTGTGAGGCGGTaGGCACTGAAAATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHEPVRR*ALKMAS
Trigger: CGAAGCCATTTTCAGTGCCAACCGCCTCACAGGTTC...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTTTTTCAGCCAACAAGTaGACATCGGAACCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPFSANK*TSEPVR
Trigger: CCTCACAGGTTCCGATGTCAACTTGTTGGCTGAAAA...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCAGAGCTTGGTGAGACATaGTCACTATCTCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: SYPSRGKEETKIPTQAIAELGET*SLSPPW
Trigger: CCACGGTGGAGATAGTGACAATGTCTCACCAAGCTC...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGAGCTTGGTGAGACATaGTCACTATCTCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQELGET*SLSPPW
Trigger: CCACGGTGGAGATAGTGACAATGTCTCACCAAGCTC...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GGCCTGGGATCCCATCCCAACACACACGACAGAAAACAGTGCAAAATAATAACAAACGTCGCCCAGAGCTaGGTGAGACATTGTCACTAT +
Preference number: 5 (lower is better)
Translates to: GLGSHPNTHDRKQCKIITNVAQS*VRHCHY
Trigger: ATAGTGACAATGTCTCACCAAGCTCTGGGCGACGTT...TGTTATTATTTTGCACTGTTTTCTGTCGTGTGTGTTGGGATGGGATCCCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCATCAAAGTTGATGCTGTaGATGTTCTTAAGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: PSRGKEETKIPTQAIAWASKLML*MFLSRQ
Trigger: CTGGCGGCTTAAGAACATCAACAGCATCAACTTTGA...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTAACCTGGCTGTCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTTGGTCTTCTCTGTCTTaGAATAAAACAAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: LTWLSSKACIEEVNTLTPWSSLS*NKTRPA
Trigger: CGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACCA...AGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGACAGCCAGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTCCCAGAAGCCACTCATACATACAACGGGGACATCATTCTCCCAAAAAGCGTCTGGCAGGCAATGCTTaGGTCTTCTCTGTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: SPRSHSYIQRGHHSPKKRLAGNA*VFSVFE
Trigger: TTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAG...ACGCTTTTTGGGAGAATGATGTCCCCGTTGTATGTATGAGTGGCTTCTGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAAGATGCATTTCCCGTCTaGGCACTGGAACTCGTTTCT +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKDAFPV*ALELVS
Trigger: AGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATC...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTTTTTCCTCGTCAGATTaGTCCTTGCAGTCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: FSYPSRGKEETKIPTQAIFSSSD*SLQSGP
Trigger: TGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAA...AATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCATCGCTCATGTCCTaGCAGTCATATTCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: SYPSRGKEETKIPTQAIASSLMS*QSYSRS
Trigger: TGACCGGGAATATGACTGCAAGGACATGAGCGATGA...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATCAGTCTCTAGCCATGTaGCAGACTTTGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: FLLSFTRKGRNQNPNPSHQSLAM*QTLSRV
Trigger: CACCCTGGACAAAGTCTGCAACATGGCTAGAGACTG...ATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATTGTCCAAGCATTCGTaGGTCCCGCACTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKLSKHS*VPHSLM
Trigger: CATCAAAGAGTGCGGGACCAACGAATGCTTGGACAA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGTCCAAGCATTCGTaGGTCCCGCACTCTTTGATG +
Preference number: 5 (lower is better)
Translates to: VSLILHEERKKPKSQPKPLSKHS*VPHSLM
Trigger: CATCAAAGAGTGCGGGACCAACGAATGCTTGGACAA...TGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CGGGCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCTCTGTCCAAAATACTTaGTCCTCAAAGACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RACFSYPSRGKEETKIPTSVQNT*SSKTAK
Trigger: CTTGGCCGTCTTTGAGGACAAAGTATTTTGGACAGA...GGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATACTGGCAGCCGCCATaGCTCAGGGTGGTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKYWQPP*LRVVLS
Trigger: TGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCAGGCGCAGGTAAACTaGGGCGAGTGGGGGTTGATC +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNQAQVN*GEWGLI
Trigger: GATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTAGCAAGGCTTGCATAGAAGAGGTAAACACGTTGACTCCTGAGTTTAGGGGTGAAGAGGTAAACACGTaGACTCCTGAGTTTAGGGGT +
Preference number: 5 (lower is better)
Translates to: SSKACIEEVNTLTPEFRGEEVNT*TPEFRG
Trigger: ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTC...ACCCCTAAACTCAGGAGTCAACGTGTTTACCTCTTCTATGCAAGCCTTGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATGTTGTCGCAGTCCACTaGGCCATCGCACCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNVVAVH*AIAPPE
Trigger: TTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAAC...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATACCACGTTCCTCAGGTaGGGGATGAGGCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNTTFLR*GMRLVY
Trigger: GTACACCAGCCTCATCCCCAACCTGAGGAACGTGGT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAACCACGTTCCTCAGGTaGGGGATGAGGCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKTTFLR*GMRLVY
Trigger: GTACACCAGCCTCATCCCCAACCTGAGGAACGTGGT...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATACGATGGCCCTTGGCTaGGAGCCGTTCTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNTMALG*EPFSLN
Trigger: ATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATTCAGGCCCCCTTTCTaGATCTTGGCGGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKFRPPF*ILAGVP
Trigger: GGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTTCAGGCCCCCTTTCTaGATCTTGGCGGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNFRPPF*ILAGVP
Trigger: GGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATTTTCAGCCAACAAGTaGACATCGGAACCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKFSANK*TSEPVR
Trigger: CCTCACAGGTTCCGATGTCAACTTGTTGGCTGAAAA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCTGGTCTTCTCTGTCTTaGAATAAAACAAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: CFSYPSRGKEETKIPTQAWSSLS*NKTRPA
Trigger: CGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACCA...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCACTGGCAGGCAATGCTTaGGTCTTCTCTGTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: SYPSRGKEETKIPTQAIALAGNA*VFSVFE
Trigger: TTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAG...TGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATCTGGCAGGCAATGCTTaGGTCTTCTCTGTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LILHEERKKPKSQPKPLHLAGNA*VFSVFE
Trigger: TTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAG...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCCTGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGGGAAGTGGCATCATTaGGTGAATGAGTTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: ACFSYPSRGKEETKIPTQGKWHH*VNEFGL
Trigger: GAGACCAAACTCATTCACCAAATGATGCCACTTCCC...TTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252444.9
ENST00000558518.6
CDS CCA 90 bp AAGATAAGGAGTTATTTACGCAGGAGGGCTGTGTGTTCTGGACCATaGAGAAAGGCAGAGTTACATAGTTTGTCGGCCTTCTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KIRSYLRRRAVCSGP*RKAELHSLSAFFFF
Trigger: AAAGAAGAAGAAGGCCGACAAACTATGTAACTCTGCCTTTCTCCATGGTCCAGAACACACAGCCCTCCTGCGTAAATAACTCCTTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATCGTCAGATTTGTCCTaGCAGTCGGGGCCACCATCA +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKSSDLS*QSGPPS
Trigger: TGATGGTGGCCCCGACTGCAAGGACAAATCTGACGA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCCGATCTTAAGGTCATaGCAGACGTGGGAACAGCCG +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNPILRS*QTWEQP
Trigger: CGGCTGTTCCCACGTCTGCAATGACCTTAAGATCGG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATTCCGGTTGCCCCCGTaGACATCGATGCTTGAGATG +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKFRLPP*TSMLEM
Trigger: CATCTCAAGCATCGATGTCAACGGGGGCAACCGGAA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAGATGGTCTTCCGGTaGCCCCCGTTGACATCGATG +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNKMVFR*PPLTSM
Trigger: CATCGATGTCAACGGGGGCAACCGGAAGACCATCTT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAATCTGTCCAAAATACTTaGTCCTCAAAGACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKSVQNT*SSKTAK
Trigger: CTTGGCCGTCTTTGAGGACAAAGTATTTTGGACAGA...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATGGGCACTGAAAATGGCTTCGTaGATGATATCTGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: PSRGKEETKIPTQAIAWALKMAS*MISVQN
Trigger: ATTTTGGACAGATATCATCAACGAAGCCATTTTCAG...TGCCCATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp CTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCATTGCATATCTGCTGTTGTGTGTaGAAAGCCACTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LILHEERKKPKSQPKPLHICCCV*KATCFS
Trigger: AGAGAAGCAAGTGGCTTTCAACACACAACAGCAGAT...ATGCAATGGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATCAGTCTCTAGCCATGTaGCAGACTTTGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNQSLAM*QTLSRV
Trigger: CACCCTGGACAAAGTCTGCAACATGGCTAGAGACTG...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACAGTCTCTAGCCATGTaGCAGACTTTGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKQSLAM*QTLSRV
Trigger: CACCCTGGACAAAGTCTGCAACATGGCTAGAGACTG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATTGGTCCCGCACTCTTaGATGGGTTCATCTGACCAG +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKLVPHS*MGSSDQ
Trigger: CTGGTCAGATGAACCCATCAAAGAGTGCGGGACCAA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAATTCCTCTTCACGCCCTaGGTATCCGCAACAGAGACA +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKFLFTP*VSATET
Trigger: TGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGAA...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCTTTTCAGCCAACAAGTaGACATCGGAACCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: FHLPCLRIVSRWRETQNFFSANK*TSEPVR
Trigger: CCTCACAGGTTCCGATGTCAACTTGTTGGCTGAAAA...GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAAGAGCTTGGTGAGACATaGTCACTATCTCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKELGET*SLSPPW
Trigger: CCACGGTGGAGATAGTGACAATGTCTCACCAAGCTC...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCCTGGCAGGCAATGCTTaGGTCTTCTCTGTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: FHLPCLRIVSRWRETQNFLAGNA*VFSVFE
Trigger: TTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAG...GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATGATGCATTTCCCGTCTaGGCACTGGAACTCGTTTCT +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNDAFPV*ALELVS
Trigger: AGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATC...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAACGTCGCCCAGAGCTaGGTGAGACATTGTCACTAT +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNNVAQS*VRHCHY
Trigger: ATAGTGACAATGTCTCACCAAGCTCTGGGCGACGTT...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TTTCATCTTCCATGTTTGAGGATTGTGTCACGGTGGAGAGAAACTCAAAACTTCATCTGCTGTTGTGTGTaGAAAGCCACTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: FHLPCLRIVSRWRETQNFICCCV*KATCFS
Trigger: AGAGAAGCAAGTGGCTTTCAACACACAACAGCAGAT...GAAGTTTTGAGTTTCTCTCCACCGTGACACAATCCTCAAACATGGAAGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252444.9
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TGTTTCTCTTATCCTTCACGAGGAAAGGAAGAAACCAAAATCCCAACCCAAGCCCTGAAAATGGCTTCGTaGATGATATCTGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: CFSYPSRGKEETKIPTQALKMAS*MISVQN
Trigger: ATTTTGGACAGATATCATCAACGAAGCCATTTTCAG...GGCTTGGGTTGGGATTTTGGTTTCTTCCTTTCCTCGTGAAGGATAAGAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp GCATGGGCACTGTCCGAAGCCTGTTCTGCCTCCCAGATGAATAAATATATAAAACTGAAAATGGCTTCGTaGATGATATCTGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: AWALSEACSASQMNKYIKLKMAS*MISVQN
Trigger: ATTTTGGACAGATATCATCAACGAAGCCATTTTCAG...TTTTATATATTTATTCATCTGGGAGGCAGAACAGGCTTCGGACAGTGCCCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTTTTCAGCCAACAAGTaGACATCGGAACCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNFSANK*TSEPVR
Trigger: CCTCACAGGTTCCGATGTCAACTTGTTGGCTGAAAA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp ATATATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATTGGTCTTCTCTGTCTTaGAATAAAACAAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: IYKTKLWQAMLWSSLSLNWSSLS*NKTRPA
Trigger: CGCCGGCCTTGTTTTATTCAAAGACAGAGAAGACCA...ATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACTGGCAGGCAATGCTTaGGTCTTCTCTGTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKLAGNA*VFSVFE
Trigger: TTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS-3UTR CAA 90 bp TATAAAACAAAGCTCTGGCAGGCAATGCTTTGGTCTTCTCTGTCTTTGAATAAACTGAAAATGGCTTCGTaGATGATATCTGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: YKTKLWQAMLWSSLSLNKLKMAS*MISVQN
Trigger: ATTTTGGACAGATATCATCAACGAAGCCATTTTCAG...TTTATTCAAAGACAGAGAAGACCAAAGCATTGCCTGCCAGAGCTTTGTTTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000558013.5
ENST00000558518.6
CDS CAA 72 bp GCCAGCAGCATGCCGTCCGGGCAGGCGCAGGTAAACTaGGGCGAGTGGGGGTTGATCTGCGGGGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: ASSMPSGQAQVN*GEWGLICGAGR
Trigger: CCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTGCCCGGACGGCATGCTGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 72 bp CGACCAGCGGGAATCACAGCGGCTTGCCAGTGTGTGTaGCAGGTGGCTAGCCCTCGGCAGGGACAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: RPAGITAACQCV*QVASPRQGQPP
Trigger: GGGAGGCTGTCCCTGCCGAGGGCTAGCCACCTGGCACACACACTGGCAAGCCGCTGTGATTCCCGCTGGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS GCA 72 bp AGTCGGGGTCGTTGTCGCAGGCCCACAGCTGGGGGATaGAGGTGGAGCTGTTGCACTGGAAGCTGGCGGGAC +
Preference number: 6 (lower is better)
Translates to: SRGRCRRPTAGG*RWSCCTGSWRD
Trigger: GTCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCATCCCCCAGCTGTGGGCCTGCGACAACGACCCCGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560467.1
CDS CAA 90 bp AGCATGCCGTCCGGGCAGGCGCAGGTAAACTTGGGCGAGTGGGGGTaGATCTGCGGGGCAGGGAGGCACAGATACTGGCAGCCGCCATTG +
Preference number: 6 (lower is better)
Translates to: SMPSGQAQVNLGEWG*ICGAGRHRYWQPPL
Trigger: CAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTGCCCGGACGGCATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CAA 90 bp ATGTCCCTGGCCAGCAGCATGCCGTCCGGGCAGGCGCAGGTAAACTaGGGCGAGTGGGGGTTGATCTGCGGGGCAGGGAGGCACAGATAC +
Preference number: 6 (lower is better)
Translates to: MSLASSMPSGQAQVN*GEWGLICGAGRHRY
Trigger: GTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTGCCCGGACGGCATGCTGCTGGCCAGGGACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 72 bp CAGGCGCAGGTAAACTTGGGCGAGTGGGGGTTGATCTaGGGGGCAGGGAGGCACAGATACTGGCAGCCGCCA +
Preference number: 6 (lower is better)
Translates to: QAQVNLGEWGLI*GAGRHRYWQPP
Trigger: TGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 72 bp GAGCACTGTAGGGAGAGGCACGCTCTGTCACACAGCTaGCCCCGAGACCAGAGACCCAGCTCCGTGGCGATG +
Preference number: 6 (lower is better)
Translates to: EHCRERHALSHS*PRDQRPSSVAM
Trigger: CATCGCCACGGAGCTGGGTCTCTGGTCTCGGGGGCAGCTGTGTGACAGAGCGTGCCTCTCCCTACAGTGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557933.5
CDS GCA 72 bp TCACGGGGATCACGACCAGCGGGAATCACAGCGGCTTaGCAGTGTGTGTGCCAGGTGGCTAGCCCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: SRGSRPAGITAA*QCVCQVASPRQ
Trigger: CTGCCGAGGGCTAGCCACCTGGCACACACACTGGCAAGCCGCTGTGATTCCCGCTGGTCGTGATCCCCGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CCA 72 bp ATGCCGTCCGGGCAGGCGCAGGTAAACTTGGGCGAGTaGGGGTTGATCTGCGGGGCAGGGAGGCACAGATAC +
Preference number: 6 (lower is better)
Translates to: MPSGQAQVNLGE*GLICGAGRHRY
Trigger: GTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTGCCCGGACGGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CAA 72 bp GCCACCTCCGTGTCCAGAGCGACCACGTTCCTCAGGTaGGGGATGAGGCTGGTGTACTCGCTCCGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: ATSVSRATTFLR*GMRLVYSLRSS
Trigger: GCTGGACCGGAGCGAGTACACCAGCCTCATCCCCAACCTGAGGAACGTGGTCGCTCTGGACACGGAGGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560173.1
ENST00000560467.1
CDS CAA 72 bp TCCGGGCAGGCGCAGGTAAACTTGGGCGAGTGGGGGTaGATCTGCGGGGCAGGGAGGCACAGATACTGGCAG +
Preference number: 6 (lower is better)
Translates to: SGQAQVNLGEWG*ICGAGRHRYWQ
Trigger: CTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTGCCCGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS TCA 72 bp GAGCTTGGTGAGACATTGTCACTATCTCCACCGTGGTaGGCCCAGGGGTGGCCCCAGGCAGCCGGGAGGTGT +
Preference number: 6 (lower is better)
Translates to: ELGETLSLSPPW*AQGWPQAAGRC
Trigger: ACACCTCCCGGCTGCCTGGGGCCACCCCTGGGCTCACCACGGTGGAGATAGTGACAATGTCTCACCAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 72 bp AGTCGGGGCCACCATCACAGCGCCAGCTGGAGTGGATaGACTCGCCACTTAGGCAGTGGAACTCGAAGGCCG +
Preference number: 6 (lower is better)
Translates to: SRGHHHSASWSG*TRHLGSGTRRP
Trigger: CGGCCTTCGAGTTCCACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATGGTGGCCCCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560467.1
CDS GCA 72 bp GCGGGGCAGGGAGGCACAGATACTGGCAGCCGCCATTaGTCAGGGTGGTCCTCTCACACCAGTTCACTCCTC +
Preference number: 6 (lower is better)
Translates to: AGQGGTDTGSRH*SGWSSHTSSLL
Trigger: GAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CCA 72 bp CGCCAGCTGGAGTGGATGCACTCGCCACTTAGGCAGTaGAACTCGAAGGCCGAGCAGGGGCTACTGTCCCCT +
Preference number: 6 (lower is better)
Translates to: RQLEWMHSPLRQ*NSKAEQGLLSP
Trigger: AGGGGACAGTAGCCCCTGCTCGGCCTTCGAGTTCCACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560467.1
CDS CCA 72 bp TGGGGGTTGATCTGCGGGGCAGGGAGGCACAGATACTaGCAGCCGCCATTGCTCAGGGTGGTCCTCTCACAC +
Preference number: 6 (lower is better)
Translates to: WGLICGAGRHRY*QPPLLRVVLSH
Trigger: GTGTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CAA 90 bp GGGCGACAGGTGGCCACAGCGCAGTTTTCCTCGTCAGATTTGTCCTaGCAGTCGGGGCCACCATCACAGCGCCAGCTGGAGTGGATGCAC +
Preference number: 6 (lower is better)
Translates to: GRQVATAQFSSSDLS*QSGPPSQRQLEWMH
Trigger: GTGCATCCACTCCAGCTGGCGCTGTGATGGTGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAACTGCGCTGTGGCCACCTGTCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560467.1
CDS CAA 90 bp GGGTTGATCTGCGGGGCAGGGAGGCACAGATACTGGCAGCCGCCATaGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCTCTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: GLICGAGRHRYWQPP*LRVVLSHQFTPLGW
Trigger: CCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS TCA 72 bp CCGTGTCCAGAGCGACCACGTTCCTCAGGTTGGGGATaGGGCTGGTGTACTCGCTCCGGTCCAGCGTCATCT +
Preference number: 6 (lower is better)
Translates to: PCPERPRSSGWG*GWCTRSGPASS
Trigger: AGATGACGCTGGACCGGAGCGAGTACACCAGCCTCATCCCCAACCTGAGGAACGTGGTCGCTCTGGACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560173.1
ENST00000560467.1
CDS TCA 72 bp GGGTCCCTCGCAGAGTGTCAGACAGCCTTGCTCGTCTaGGCCGTTGTCGCAGTCCACTTGGCCATCGCACCT +
Preference number: 6 (lower is better)
Translates to: GSLAECQTALLV*AVVAVHLAIAP
Trigger: AGGTGCGATGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGTCTGACACTCTGCGAGGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455727.6
CDS CAA 72 bp TGCGGGGCAGGGAGGCACAGATACTGGCAGCCGCCATaGCTCAGGGTGGTCCTCTCACACCAGTTCACTCCT +
Preference number: 6 (lower is better)
Translates to: CGAGRHRYWQPP*LRVVLSHQFTP
Trigger: AGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CAA 90 bp CTATTGCTGGCCACCTCCGTGTCCAGAGCGACCACGTTCCTCAGGTaGGGGATGAGGCTGGTGTACTCGCTCCGGTCCAGCGTCATCTTC +
Preference number: 6 (lower is better)
Translates to: LLLATSVSRATTFLR*GMRLVYSLRSSVIF
Trigger: GAAGATGACGCTGGACCGGAGCGAGTACACCAGCCTCATCCCCAACCTGAGGAACGTGGTCGCTCTGGACACGGAGGTGGCCAGCAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560173.1
ENST00000560467.1
CDS GCA 72 bp TTCGCATCTGTCGCCCACGTGGCTGAAGATCTCGGCTaGAGACCAAGGAGGGGCGGGGAGATTCTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: FASVAHVAEDLG*RPRRGGEILRQ
Trigger: TTGCCTCAGAATCTCCCCGCCCCTCCTTGGTCTGCAGCCGAGATCTTCAGCCACGTGGGCGACAGATGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252444.9
CDS GCA 72 bp AGCCGGGAGGTGTCGGGAACAGGTCGGGTGGTTGTGTaGTGTGTCCTTACGGCTGTGGAGCTGACCTTTAGC +
Preference number: 6 (lower is better)
Translates to: SREVSGTGRVVV*CVLTAVELTFS
Trigger: GCTAAAGGTCAGCTCCACAGCCGTAAGGACACAGCACACAACCACCCGACCTGTTCCCGACACCTCCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CCA 72 bp GGAGGCACAGATACTGGCAGCCGCCATTGCTCAGGGTaGTCCTCTCACACCAGTTCACTCCTCTTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: GGTDTGSRHCSG*SSHTSSLLLAG
Trigger: CCCAGCCAAGAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CAA 72 bp GTGGCCACAGCGCAGTTTTCCTCGTCAGATTTGTCCTaGCAGTCGGGGCCACCATCACAGCGCCAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: VATAQFSSSDLS*QSGPPSQRQLE
Trigger: CTCCAGCTGGCGCTGTGATGGTGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAACTGCGCTGTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560467.1
CDS TCA 72 bp AAAGGCAGGGCCACACTTACGACAGCCTTGCTCGTCTaGGCCGTTGTCGCAGTCCACTTGGCCATCGCACCT +
Preference number: 6 (lower is better)
Translates to: KGRATLTTALLV*AVVAVHLAIAP
Trigger: AGGTGCGATGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGTCGTAAGTGTGGCCCTGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS GCA 72 bp AGTCCCGGTCTGAGTCACAGACGAACTGCCGAGAGATaGACTTCCCATCGTGGCAGCGAAACTCGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SPGLSHRRTAER*TSHRGSETRPG
Trigger: CCCAGGACGAGTTTCGCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCAGACCGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 72 bp CCGTCCAAGCAGTCCCGGTCTGAGTCACAGACGAACTaGCGAGAGATGCACTTCCCATCGTGGCAGCGAAAC +
Preference number: 6 (lower is better)
Translates to: PSKQSRSESQTN*REMHFPSWQRN
Trigger: GTTTCGCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCAGACCGGGACTGCTTGGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 72 bp TGGCCACAGCGCAGTTTTCCTCGTCAGATTTGTCCTTaGAGTCGGGGCCACCATCACAGCGCCAGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: WPQRSFPRQICP*SRGHHHSASWS
Trigger: ACTCCAGCTGGCGCTGTGATGGTGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAACTGCGCTGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560467.1
CDS CCA 72 bp TCACAGACGAACTGCCGAGAGATGCACTTCCCATCGTaGCAGCGAAACTCGTCCTGGGAGCACGTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: SQTNCREMHFPS*QRNSSWEHVLG
Trigger: CCCCAAGACGTGCTCCCAGGACGAGTTTCGCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CCA 72 bp ACCAGAGACCCAGCTCCGTGGCGATGGGGAGGACAATaGACAGAGCCCTCACGCTACTGGGCTTCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: TRDPAPWRWGGQ*TEPSRYWASSH
Trigger: ATGAGAAGAAGCCCAGTAGCGTGAGGGCTCTGTCCATTGTCCTCCCCATCGCCACGGAGCTGGGTCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557933.5
CDS GCA 72 bp CCTGGGACTCATCAGAGCCATCCTGGCACTCAGCGCTaGCATCGCAGACCCACTTGTAGGAGATGCATTTCC +
Preference number: 6 (lower is better)
Translates to: PGTHQSHPGTQR*HRRPTCRRCIS
Trigger: GGAAATGCATCTCCTACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGAGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000557958.1
ENST00000558013.5
ENST00000558518.6
ENST00000560502.5
CDS CCA 72 bp CGATGGGGAGGACAATGGACAGAGCCCTCACGCTACTaGGCTTCTTCTCATTTCCTCTGCCAGCAACGTCGC +
Preference number: 6 (lower is better)
Translates to: RWGGQWTEPSRY*ASSHFLCQQRR
Trigger: GCGACGTTGCTGGCAGAGGAAATGAGAAGAAGCCCAGTAGCGTGAGGGCTCTGTCCATTGTCCTCCCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS CAA 90 bp AGCGCTGCCATCGCAGACCCACTTGTAGGAGATGCATTTCCCGTCTaGGCACTGGAACTCGTTTCTTTCGCATCTGTCGCCCACGTGGCT +
Preference number: 6 (lower is better)
Translates to: SAAIADPLVGDAFPV*ALELVSFASVAHVA
Trigger: AGCCACGTGGGCGACAGATGCGAAAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATCTCCTACAAGTGGGTCTGCGATGGCAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252444.9
CDS TCA 72 bp CCACCACGATGGCCCTTGGCTTGGAGCCGTTCTCCCTaGATAACGTTTTCCTCTTCACGCCCTTGGTATCCG +
Preference number: 6 (lower is better)
Translates to: PPRWPLAWSRSP*ITFSSSRPWYP
Trigger: CGGATACCAAGGGCGTGAAGAGGAAAACGTTATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000559340.1
CDS GCA 72 bp TCAATAGCAAAGGCAGGGCCACACTTACGACAGCCTTaGTCGTCTGAGCCGTTGTCGCAGTCCACTTGGCCA +
Preference number: 6 (lower is better)
Translates to: SIAKAGPHLRQP*SSEPLSQSTWP
Trigger: TGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGTCGTAAGTGTGGCCCTGCCTTTGCTATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CAA 72 bp GGTTCATCTGACCAGTCCCGGCAGTCTCTAGCCATGTaGCAGACTTTGTCCAGGGTGATGCATTCGCCGCTG +
Preference number: 6 (lower is better)
Translates to: GSSDQSRQSLAM*QTLSRVMHSPL
Trigger: CAGCGGCGAATGCATCACCCTGGACAAAGTCTGCAACATGGCTAGAGACTGCCGGGACTGGTCAGATGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000558528.1
ENST00000560467.1
CDS CAA 90 bp AGCGCTGCCATCGCAGACCCACTTGTAGGAGATGCATTTCCCGTCTaGGCACTGGAACTCGTTTCTTTCGCATCTGTCGCCCACTGCAGT +
Preference number: 6 (lower is better)
Translates to: SAAIADPLVGDAFPV*ALELVSFASVAHCS
Trigger: ACTGCAGTGGGCGACAGATGCGAAAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATCTCCTACAAGTGGGTCTGCGATGGCAGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000557958.1
ENST00000558013.5
ENST00000558518.6
ENST00000560502.5
CDS TCA 72 bp GCATTCGTTGGTCCCGCACTCTTTGATGGGTTCATCTaGCCAGTCCCGGCAGTCTCTAGCCATGTTGCAGAC +
Preference number: 6 (lower is better)
Translates to: AFVGPALFDGFI*PVPAVSSHVAD
Trigger: GTCTGCAACATGGCTAGAGACTGCCGGGACTGGTCAGATGAACCCATCAAAGAGTGCGGGACCAACGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS TCA 72 bp GCGAGTAGATGTCCACACCATTCAGGCCCCCTTTCTTaGTCTTGGCGGGAGTTCCCCAGTCAGTCCAGTACA +
Preference number: 6 (lower is better)
Translates to: ASRCPHHSGPLS*SWREFPSQSST
Trigger: TGTACTGGACTGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAATGGTGTGGACATCTACTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000559340.1
CDS GCA 72 bp TCATTCTCTGGGACAGGTCAGACCAGTAGATTCTATTaGTGGCCACCTCCGTGTCCAGAGCGACCACGTTCC +
Preference number: 6 (lower is better)
Translates to: SFSGTGQTSRFY*WPPPCPERPRS
Trigger: GGAACGTGGTCGCTCTGGACACGGAGGTGGCCAGCAATAGAATCTACTGGTCTGACCTGTCCCAGAGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000559340.1
ENST00000560173.1
ENST00000560467.1
CDS GCA 72 bp TCCTCTTCACGCCCTTGGTATCCGCAACAGAGACAGTaGCCAGGACAGAGTCGGTCCAGTAGATGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: SSSRPWYPQQRQ*PGQSRSSRCCC
Trigger: ACAGCAACATCTACTGGACCGACTCTGTCCTGGGCACTGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000559340.1
CDS CCA 72 bp TTCTCTGGGACAGGTCAGACCAGTAGATTCTATTGCTaGCCACCTCCGTGTCCAGAGCGACCACGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: FSGTGQTSRFYC*PPPCPERPRSS
Trigger: TGAGGAACGTGGTCGCTCTGGACACGGAGGTGGCCAGCAATAGAATCTACTGGTCTGACCTGTCCCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000560173.1
ENST00000560467.1
CDS TCA 72 bp TTGCAGACTTTGTCCAGGGTGATGCATTCGCCGCTGTaGCACTTGAACTTGTTGGGTCCCTCGCAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: LQTLSRVMHSPL*HLNLLGPSQSV
Trigger: GACACTCTGCGAGGGACCCAACAAGTTCAAGTGTCACAGCGGCGAATGCATCACCCTGGACAAAGTCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000558528.1
ENST00000560467.1
CDS CCA 72 bp CACTGCACCTGGCCGCTTGCTGGAGATTTTATAGAATaGTGCTTGTGCTGTGCGCTGAAGAGGGCTTTGTGC +
Preference number: 6 (lower is better)
Translates to: HCTWPLAGDFIE*CLCCALKRALC
Trigger: GCACAAAGCCCTCTTCAGCGCACAGCACAAGCACCATTCTATAAAATCTCCAGCAAGCGGCCAGGTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CAA 72 bp GTCACATTAACGCAGCCAACTTCATCGCTCATGTCCTaGCAGTCATATTCCCGGTCACACTGCCGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: VTLTQPTSSLMS*QSYSRSHCRLP
Trigger: TGGCAGCCGGCAGTGTGACCGGGAATATGACTGCAAGGACATGAGCGATGAAGTTGGCTGCGTTAATGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000558528.1
ENST00000560467.1
CDS CAA 72 bp CCGTTCTCCCTGAATAACGTTTTCCTCTTCACGCCCTaGGTATCCGCAACAGAGACAGTGCCCAGGACAGAG +
Preference number: 6 (lower is better)
Translates to: PFSLNNVFLFTP*VSATETVPRTE
Trigger: CTCTGTCCTGGGCACTGTCTCTGTTGCGGATACCAAGGGCGTGAAGAGGAAAACGTTATTCAGGGAGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000559340.1
CDS TCA 72 bp GATGGTCTTCCGGTTGCCCCCGTTGACATCGATGCTTaGGATGGAGTGAAGTTTGGAGTCAACCCAGTAGAG +
Preference number: 6 (lower is better)
Translates to: DGLPVAPVDIDA*DGVKFGVNPVE
Trigger: CTCTACTGGGTTGACTCCAAACTTCACTCCATCTCAAGCATCGATGTCAACGGGGGCAACCGGAAGACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS GCA 72 bp ACTCAGCGCTGCCATCGCAGACCCACTTGTAGGAGATaGATTTCCCGTCTTGGCACTGGAACTCGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: TQRCHRRPTCRR*ISRLGTGTRFF
Trigger: AAAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATCTCCTACAAGTGGGTCTGCGATGGCAGCGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000557958.1
ENST00000558013.5
ENST00000558518.6
ENST00000560502.5
CDS GCA 72 bp TGCACCTGGCCGCTTGCTGGAGATTTTATAGAATGGTaGTTGTGCTGTGCGCTGAAGAGGGCTTTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: CTWPLAGDFIEW*LCCALKRALCS
Trigger: ACTGCACAAAGCCCTCTTCAGCGCACAGCACAAGCACCATTCTATAAAATCTCCAGCAAGCGGCCAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CCA 72 bp TTGCAGTCATATTCCCGGTCACACTGCCGGCTGCCATaGATGCAGTTTCCATCAGAGCACTGGAATTCGTCA +
Preference number: 6 (lower is better)
Translates to: LQSYSRSHCRLP*MQFPSEHWNSS
Trigger: TGACGAATTCCAGTGCTCTGATGGAAACTGCATCCATGGCAGCCGGCAGTGTGACCGGGAATATGACTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000558528.1
ENST00000560467.1
CDS CCA 72 bp CTTTTCCCCCTTCATGTTACGTGGGTCATTGAGGCTTaGCTAGCAAGCGTCACTATGTGTTCAGCCTCACGG +
Preference number: 6 (lower is better)
Translates to: LFPLHVTWVIEA*LASVTMCSASR
Trigger: CCGTGAGGCTGAACACATAGTGACGCTTGCTAGCCAAGCCTCAATGACCCACGTAACATGAAGGGGGAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CCA 72 bp TTCCATCAGAGCACTGGAATTCGTCAGGGCGACAGGTaGCCACAGCTGGAAAACAGGACAGAGTGTGTTGAT +
Preference number: 6 (lower is better)
Translates to: FHQSTGIRQGDR*PQLENRTECVD
Trigger: ATCAACACACTCTGTCCTGTTTTCCAGCTGTGGCCACCTGTCGCCCTGACGAATTCCAGTGCTCTGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558528.1
CDS CAA 90 bp CCAGCTTCAAAGTCCATTTCCCTTCGGGATTCTTGGCCTTGCTCCTaGGCAGAACTTTCTGGCTTTTCCCCCTTCATGTTACGTGGGTCA +
Preference number: 6 (lower is better)
Translates to: PASKSISLRDSWPCS*AELSGFSPFMLRGS
Trigger: TGACCCACGTAACATGAAGGGGGAAAAGCCAGAAAGTTCTGCCAAGGAGCAAGGCCAAGAATCCCGAAGGGAAATGGACTTTGAAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS TCA 72 bp ACACTCATCGATATCGCACTCTTTGATGGGTTCATCTaGCCAGTCCCGGCAGTCTCTAGCCATGTTGCAGAC +
Preference number: 6 (lower is better)
Translates to: TLIDIALFDGFI*PVPAVSSHVAD
Trigger: GTCTGCAACATGGCTAGAGACTGCCGGGACTGGTCAGATGAACCCATCAAAGAGTGCGATATCGATGAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560467.1
CDS CCA 72 bp GGCAGAACTTTCTGGCTTTTCCCCCTTCATGTTACGTaGGTCATTGAGGCTTGGCTAGCAAGCGTCACTATG +
Preference number: 6 (lower is better)
Translates to: GRTFWLFPLHVT*VIEAWLASVTM
Trigger: CATAGTGACGCTTGCTAGCCAAGCCTCAATGACCCACGTAACATGAAGGGGGAAAAGCCAGAAAGTTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CAA 72 bp ACCTGGCCGCTTGCTGGAGATTTTATAGAATGGTGCTaGTGCTGTGCGCTGAAGAGGGCTTTGTGCAGTACT +
Preference number: 6 (lower is better)
Translates to: TWPLAGDFIEWC*CCALKRALCST
Trigger: AGTACTGCACAAAGCCCTCTTCAGCGCACAGCACAAGCACCATTCTATAAAATCTCCAGCAAGCGGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS TCA 72 bp TTTCATCCTCCAAGATGGTCTTCCGGTTGCCCCCGTTaGCATCGATGCTTGAGATGGAGTGAAGTTTGGAGT +
Preference number: 6 (lower is better)
Translates to: FHPPRWSSGCPR*HRCLRWSEVWS
Trigger: ACTCCAAACTTCACTCCATCTCAAGCATCGATGTCAACGGGGGCAACCGGAAGACCATCTTGGAGGATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
CDS TCA 72 bp TTTCTGGCTTTTCCCCCTTCATGTTACGTGGGTCATTaGGGCTTGGCTAGCAAGCGTCACTATGTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: FLAFPPSCYVGH*GLASKRHYVFS
Trigger: GCTGAACACATAGTGACGCTTGCTAGCCAAGCCTCAATGACCCACGTAACATGAAGGGGGAAAAGCCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS GCA 72 bp CCTCAGCCTCACATTGATGAGTCTTTAGGGGAGGGCTaGAGAGGCTTTTATTCTAGGTGGTTGACAAGGTTG +
Preference number: 6 (lower is better)
Translates to: PQPHIDESLGEG*RGFYSRWLTRL
Trigger: CAACCTTGTCAACCACCTAGAATAAAAGCCTCTGCAGCCCTCCCCTAAAGACTCATCAATGTGAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560628.1
CDS CCA 72 bp AGTCCATTTCCCTTCGGGATTCTTGGCCTTGCTCCTTaGCAGAACTTTCTGGCTTTTCCCCCTTCATGTTAC +
Preference number: 6 (lower is better)
Translates to: SPFPFGILGLAP*QNFLAFPPSCY
Trigger: GTAACATGAAGGGGGAAAAGCCAGAAAGTTCTGCCAAGGAGCAAGGCCAAGAATCCCGAAGGGAAATGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CAA 72 bp ATATCCTCTGGGGACAGTAGGTTTTCAGCCAACAAGTaGACATCGGAACCTGTGAGGCGGTTGGCACTGAAA +
Preference number: 6 (lower is better)
Translates to: ISSGDSRFSANK*TSEPVRRLALK
Trigger: TTTCAGTGCCAACCGCCTCACAGGTTCCGATGTCAACTTGTTGGCTGAAAACCTACTGTCCCCAGAGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000559340.1
CDS GCA 72 bp TGGCCGCTTGCTGGAGATTTTATAGAATGGTGCTTGTaGTGTGCGCTGAAGAGGGCTTTGTGCAGTACTTAT +
Preference number: 6 (lower is better)
Translates to: WPLAGDFIEWCL*CALKRALCSTY
Trigger: ATAAGTACTGCACAAAGCCCTCTTCAGCGCACAGCACAAGCACCATTCTATAAAATCTCCAGCAAGCGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CCA 72 bp AGTTATTTACGCAGGAGGGCTGTGTGTTCTGGACCATaGAGAAAGGCAGAGTTACATAGTTTGTCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SYLRRRAVCSGP*RKAELHSLSAF
Trigger: GAAGGCCGACAAACTATGTAACTCTGCCTTTCTCCATGGTCCAGAACACACAGCCCTCCTGCGTAAATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CAA 72 bp TCAGCCAACAAGTTGACATCGGAACCTGTGAGGCGGTaGGCACTGAAAATGGCTTCGTTGATGATATCTGTC +
Preference number: 6 (lower is better)
Translates to: SANKLTSEPVRR*ALKMASLMISV
Trigger: GACAGATATCATCAACGAAGCCATTTTCAGTGCCAACCGCCTCACAGGTTCCGATGTCAACTTGTTGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252444.9
ENST00000455727.6
ENST00000535915.5
ENST00000545707.5
ENST00000557933.5
ENST00000558013.5
ENST00000558518.6
ENST00000559340.1
CDS CAA 72 bp AAGTCCATTTCCCTTCGGGATTCTTGGCCTTGCTCCTaGGCAGAACTTTCTGGCTTTTCCCCCTTCATGTTA +
Preference number: 6 (lower is better)
Translates to: KSISLRDSWPCS*AELSGFSPFML
Trigger: TAACATGAAGGGGGAAAAGCCAGAAAGTTCTGCCAAGGAGCAAGGCCAAGAATCCCGAAGGGAAATGGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS TCA 72 bp GGGCTTTGTGCAGTACTTATAATGCCGAGGTTGCAGTaGGCTAACTTGCAATTTTCTATCAGCCGAGGTGTC +
Preference number: 6 (lower is better)
Translates to: GLCAVLIMPRLQ*ANLQFSISRGV
Trigger: GACACCTCGGCTGATAGAAAATTGCAAGTTAGCTCACTGCAACCTCGGCATTATAAGTACTGCACAAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CAA 72 bp TTAGGGGAGGGCTGCAGAGGCTTTTATTCTAGGTGGTaGACAAGGTTGCAGGTGAAATTCTTGTCAACCTAC +
Preference number: 6 (lower is better)
Translates to: LGEGCRGFYSRW*TRLQVKFLSTY
Trigger: GTAGGTTGACAAGAATTTCACCTGCAACCTTGTCAACCACCTAGAATAAAAGCCTCTGCAGCCCTCCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560628.1
CDS CAA 90 bp GATGAGTCTTTAGGGGAGGGCTGCAGAGGCTTTTATTCTAGGTGGTaGACAAGGTTGCAGGTGAAATTCTTGTCAACCTACTTGTGCATT +
Preference number: 6 (lower is better)
Translates to: DESLGEGCRGFYSRW*TRLQVKFLSTYLCI
Trigger: AATGCACAAGTAGGTTGACAAGAATTTCACCTGCAACCTTGTCAACCACCTAGAATAAAAGCCTCTGCAGCCCTCCCCTAAAGACTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560628.1
CDS CCA 72 bp TGCAATTTTCTATCAGCCGAGGTGTCTGATGATAGCTaGGAGCAGGAAGATAAGGAGTTATTTACGCAGGAG +
Preference number: 6 (lower is better)
Translates to: CNFLSAEVSDDS*EQEDKELFTQE
Trigger: CTCCTGCGTAAATAACTCCTTATCTTCCTGCTCCCAGCTATCATCAGACACCTCGGCTGATAGAAAATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CAA 90 bp GACGTTTCAGAATTTCGGGTGCTCAAGACTTTGAATTTCGGGGTTTaGGATTTGGATGTGCCACTTGTATTAAGACAGCCAAGAAGACGC +
Preference number: 6 (lower is better)
Translates to: DVSEFRVLKTLNFGV*DLDVPLVLRQPRRR
Trigger: GCGTCTTCTTGGCTGTCTTAATACAAGTGGCACATCCAAATCCAAAACCCCGAAATTCAAAGTCTTGAGCACCCGAAATTCTGAAACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS TCA 72 bp CTCAAGACGTTTCAGAATTTCGGGTGCTCAAGACTTTaGATTTCGGGGTTTTGGATTTGGATGTGCCACTTG +
Preference number: 6 (lower is better)
Translates to: LKTFQNFGCSRL*ISGFWIWMCHL
Trigger: CAAGTGGCACATCCAAATCCAAAACCCCGAAATTCAAAGTCTTGAGCACCCGAAATTCTGAAACGTCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CAA 72 bp CGGGTGCTCAAGACTTTGAATTTCGGGGTTTTGGATTaGGATGTGCCACTTGTATTAAGACAGCCAAGAAGA +
Preference number: 6 (lower is better)
Translates to: RVLKTLNFGVLD*DVPLVLRQPRR
Trigger: TCTTCTTGGCTGTCTTAATACAAGTGGCACATCCAAATCCAAAACCCCGAAATTCAAAGTCTTGAGCACCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557958.1
CDS CAA 72 bp GGCTGCAGAGGCTTTTATTCTAGGTGGTTGACAAGGTaGCAGGTGAAATTCTTGTCAACCTACTTGTGCATT +
Preference number: 6 (lower is better)
Translates to: GCRGFYSRWLTR*QVKFLSTYLCI
Trigger: AATGCACAAGTAGGTTGACAAGAATTTCACCTGCAACCTTGTCAACCACCTAGAATAAAAGCCTCTGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560628.1
CDS GCA 72 bp ACTCCACACTCAGTGGTAAAAATCCGAAATCCAAAATaGTCCAATAAGCATTTCCTTCTAAAGGTCAGTGCT +
Preference number: 6 (lower is better)
Translates to: TPHSVVKIRNPK*SNKHFLLKVSA
Trigger: AGCACTGACCTTTAGAAGGAAATGCTTATTGGAGCATTTTGGATTTCGGATTTTTACCACTGAGTGTGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557958.1