RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LDHD (Homo sapiens)

Ensembl gene IDs: ENSG00000166816

Ensembl transcript IDs: ENST00000300051.8, ENST00000450168.3, ENST00000568164.1, ENST00000569876.2

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGCATGGTGCCGTAGCGGACCGCGTTGGTCCCCGACGCCCCGGTaGCCGCCATGCCACAGAGAGAGGCGTCCGCGCCTGGGTCCACGG +
Preference number: 1 (lower is better)
Translates to: PAWCRSGPRWSPTPR*PPCHRERRPRLGPR
Trigger: CCGTGGACCCAGGCGCGGACGCCTCTCTCTGTGGCATGGCGGCCACCGGGGCGTCGGGGACCAACGCGGTCCGCTACGGCACCATGCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp TGCCGTAGCGGACCGCGTTGGTCCCCGACGCCCCGGTGGCCGCCATaGCACAGAGAGAGGCGTCCGCGCCTGGGTCCACGGGAAACCAGA +
Preference number: 1 (lower is better)
Translates to: CRSGPRWSPTPRWPP*HRERRPRLGPRETR
Trigger: TCTGGTTTCCCGTGGACCCAGGCGCGGACGCCTCTCTCTGTGGCATGGCGGCCACCGGGGCGTCGGGGACCAACGCGGTCCGCTACGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp TCTGGCCAGAAGCCGAAGCGGAAATGCCGGCCTCGGCCCGCCGTGTaGAGCAGCCGCCCGTCGGGCAGCACCACCTCCAGGTTGAGCACG +
Preference number: 1 (lower is better)
Translates to: SGQKPKRKCRPRPAV*SSRPSGSTTSRLST
Trigger: CGTGCTCAACCTGGAGGTGGTGCTGCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGCTTCGGCTTCTGGCCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp GCAGCCTGGCCGCGTGGCCAGGGCTGCGTACCAGGCATTGTGCCGTaGTGTCCAAAGCCGGCTGCGCTCCTCGGCCTCCTTGGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: AAWPRGQGCVPGIVP*CPKPAALLGLLGPG
Trigger: TCCTGGGCCAAGGAGGCCGAGGAGCGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp CCCTTGCAGCCTGGCCGCGTGGCCAGGGCTGCGTACCAGGCATTGTaGCGTGCTGTCCAAAGCCGGCTGCGCTCCTCGGCCTCCTTGGCC +
Preference number: 1 (lower is better)
Translates to: PLQPGRVARAAYQAL*RAVQSRLRSSASLA
Trigger: GGCCAAGGAGGCCGAGGAGCGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGCAAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp GCATCAGGAGGTTCGCACCTGTGCACCGACTCATCGCGCCCGTGCTaGTCTCGGACCACCGCGGCAGTGGACACGTGGGAGCCGCCCACC +
Preference number: 1 (lower is better)
Translates to: ASGGSHLCTDSSRPC*SRTTAAVDTWEPPT
Trigger: GGTGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAGCACGGGCGCGATGAGTCGGTGCACAGGTGCGAACCTCCTGATGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 90 bp GCACCGACTCATCGCGCCCGTGCTGCTCTCGGACCACCGCGGCAGTaGACACGTGGGAGCCGCCCACCACGGCCTTCAGAGCCTCTACGA +
Preference number: 1 (lower is better)
Translates to: APTHRARAALGPPRQ*TRGSRPPRPSEPLR
Trigger: TCGTAGAGGCTCTGAAGGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAGCACGGGCGCGATGAGTCGGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp ACAGCATCAGGAGGTTCGCACCTGTGCACCGACTCATCGCGCCCGTaGTGCTCTCGGACCACCGCGGCAGTGGACACGTGGGAGCCGCCC +
Preference number: 1 (lower is better)
Translates to: TASGGSHLCTDSSRP*CSRTTAAVDTWEPP
Trigger: GGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAGCACGGGCGCGATGAGTCGGTGCACAGGTGCGAACCTCCTGATGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp TTGAGCTGCCGCATGGTCTCCACGCCCACGGCGCCCACCTCCTCCTaGAGCAGCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTG +
Preference number: 1 (lower is better)
Translates to: LSCRMVSTPTAPTSS*SSCRLPIPMPCSPV
Trigger: CACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGCAGGAGGAGGTGGGCGCCGTGGGCGTGGAGACCATGCGGCAGCTCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 90 bp TCATCGCGCCCGTGCTGCTCTCGGACCACCGCGGCAGTGGACACGTaGGAGCCGCCCACCACGGCCTTCAGAGCCTCTACGAAGTCCCTG +
Preference number: 1 (lower is better)
Translates to: SSRPCCSRTTAAVDT*EPPTTAFRASTKSL
Trigger: CAGGGACTTCGTAGAGGCTCTGAAGGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAGCACGGGCGCGATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 90 bp TCCGCGCCTGGGTCCACGGGAAACCAGAGGCCGCTGTCCCGCAGGTaGGCGTTGAGGGCTTTGCGGGTGACACCTGGCTCCACCACCACA +
Preference number: 1 (lower is better)
Translates to: SAPGSTGNQRPLSRR*ALRALRVTPGSTTT
Trigger: TGTGGTGGTGGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCTCTGGTTTCCCGTGGACCCAGGCGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp CACATCCGTGGAGTAGCCCTTGCAGCCTGGCCGCGTGGCCAGGGCTaGGTACCAGGCATTGTGCCGTGCTGTCCAAAGCCGGCTGCGCTC +
Preference number: 1 (lower is better)
Translates to: HIRGVALAAWPRGQG*VPGIVPCCPKPAAL
Trigger: GAGCGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGCAAGGGCTACTCCACGGATGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp CCAGGGCTGCGTACCAGGCATTGTGCCGTGCTGTCCAAAGCCGGCTaGGCTCCTCGGCCTCCTTGGCCCAGGAGAAGTCAGAGGCTCCGT +
Preference number: 1 (lower is better)
Translates to: PGLRTRHCAVLSKAG*APRPPWPRRSQRLR
Trigger: ACGGAGCCTCTGACTTCTCCTGGGCCAAGGAGGCCGAGGAGCGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGGTACGCAGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 90 bp CTGCACAGCACAGACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATaGGATGATGGGCACACCTTGGCGATAGCACAGGGCTGCCAGCCG +
Preference number: 1 (lower is better)
Translates to: LHSTDATLKPGAGAE*DDGHTLAIAQGCQP
Trigger: CGGCTGGCAGCCCTGTGCTATCGCCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGTCTGTGCTGTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 90 bp CCGGCAGTGGGAGGCCTCGGGGAGGGGTGTCATCAGAGTCTTGAATaGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGC +
Preference number: 1 (lower is better)
Translates to: PAVGGLGEGCHQSLE*TQTLSSRQDRMRRS
Trigger: GCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGAGGCCTCCCACTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CCA 90 bp TCAGATCCTCCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGATaGGCACACACACATCCGTGGAGTAGCCCTTGCAGCCTGGCCGCG +
Preference number: 1 (lower is better)
Translates to: SDPPWSAPRSPAAGR*AHTHPWSSPCSLAA
Trigger: CGCGGCCAGGCTGCAAGGGCTACTCCACGGATGTGTGTGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp ACTCAATGCGGGCTACGGGCACTGCAGCCTGGAGGATGTGTACAGTaGTGTCCACAGCAGCCTGGACACTGGGGAACGCACACGTGGCGG +
Preference number: 1 (lower is better)
Translates to: TQCGLRALQPGGCVQ*CPQQPGHWGTHTWR
Trigger: CCGCCACGTGTGCGTTCCCCAGTGTCCAGGCTGCTGTGGACAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGCATTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 90 bp TCTCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTaGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTG +
Preference number: 1 (lower is better)
Translates to: SLWALWPWAQIQWAR*QEDCLSIYFLAGAV
Trigger: CACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CCA 90 bp TGGACTGTGCGCTGCAGCTGCTCCTCCAGTGCCTGCTGGGAGCCATaGAACTCCAGGAAGAGTGTGGGCGCCACTAAGCAATTCAGCTTG +
Preference number: 1 (lower is better)
Translates to: WTVRCSCSSSACWEP*NSRKSVGATKQFSL
Trigger: CAAGCTGAATTGCTTAGTGGCGCCCACACTCTTCCTGGAGTTCCATGGCTCCCAGCAGGCACTGGAGGAGCAGCTGCAGCGCACAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp ACCACAGAGAAGTCCTCCTGGTTCAGCTCCAGGATTCGGTCCATATaGGTCAGGTTAACGCAGACGCCGCCCTGCACAGCACAGACGCCA +
Preference number: 1 (lower is better)
Translates to: TTEKSSWFSSRIRSI*VRLTQTPPCTAQTP
Trigger: TGGCGTCTGTGCTGTGCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGACCGAATCCTGGAGCTGAACCAGGAGGACTTCTCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 90 bp ATGACTTCATCCAGGAACTCAATGCGGGCTACGGGCACTGCAGCCTaGAGGATGTGTACAGTGCTGTCCACAGCAGCCTGGACACTGGGG +
Preference number: 1 (lower is better)
Translates to: MTSSRNSMRATGTAA*RMCTVLSTAAWTLG
Trigger: CCCCAGTGTCCAGGCTGCTGTGGACAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGCATTGAGTTCCTGGATGAAGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 90 bp CTGCCCAGTTCCTCGGCGTCATCAGGGTTGACCAGCAGGATGCAGTaGAAGTTGCCGTCACCCACATGCCCGACAATGCTTCCTGTGAGT +
Preference number: 1 (lower is better)
Translates to: LPSSSASSGLTSRMQ*KLPSPTCPTMLPVS
Trigger: ACTCACAGGAAGCATTGTCGGGCATGTGGGTGACGGCAACTTCCACTGCATCCTGCTGGTCAACCCTGATGACGCCGAGGAACTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp ACAATGCTTCCTGTGAGTCCTGAGGCATTCAGATCCTCCTTGGTCTaGACCACGATCTCCGGCAGCCGGGAGATGGGCACACACACATCC +
Preference number: 1 (lower is better)
Translates to: TMLPVSPEAFRSSLV*TTISGSREMGTHTS
Trigger: GGATGTGTGTGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAATGCCTCAGGACTCACAGGAAGCATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 90 bp GCTCCTCCAGTGCCTGCTGGGAGCCATGGAACTCCAGGAAGAGTGTaGGCGCCACTAAGCAATTCAGCTTGCTGTACCTGTTGCAGGCAT +
Preference number: 1 (lower is better)
Translates to: APPVPAGSHGTPGRV*APLSNSACCTCCRH
Trigger: ATGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAGTGGCGCCCACACTCTTCCTGGAGTTCCATGGCTCCCAGCAGGCACTGGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR TCA 90 bp GTTGTAGCCGGCTGCACTCTTCCTACGTCCCAGGGACACACAAGGTaGGTACCAGGCTGTGTGATGAGGGATTTCTGGCCAGAAGCCGAA +
Preference number: 1 (lower is better)
Translates to: VVAGCTLPTSQGHTR*VPGCVMRDFWPEAE
Trigger: TTCGGCTTCTGGCCAGAAATCCCTCATCACACAGCCTGGTACTCACCTTGTGTGTCCCTGGGACGTAGGAAGAGTGCAGCCGGCTACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 90 bp ACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTaGAGGGGCCGTGGCATGAAGAAAAGTTCCAGAACCGGCTCCGTA +
Preference number: 1 (lower is better)
Translates to: TVGSLAGRLPQHLFP*RGRGMKKSSRTGSV
Trigger: TACGGAGCCGGTTCTGGAACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CCA 90 bp GCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTaGCATGAAGAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACT +
Preference number: 1 (lower is better)
Translates to: AGRKTASASISLQGP*HEEKFQNRLRSQGT
Trigger: AGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR TCA 90 bp GAAGCGGAAATGCCGGCCTCGGCCCGCCGTGTGCAGCAGCCGCCCGTCGGGCAGCGGTGCCGAATGGGATaGTGGGCACACCTTGGCGAT +
Preference number: 2 (lower is better)
Translates to: EAEMPASARRVQQPPVGQRCRMG*WAHLGD
Trigger: ATCGCCAAGGTGTGCCCATCATCCCATTCGGCACCG...CTGCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR GCA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGACTCATCGCGCCCGTaGTGCTCTCGGACCACCGCG +
Preference number: 2 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRDSSRP*CSRTTA
Trigger: CGCGGTGGTCCGAGAGCAGCACGGGCGCGATGAGTC...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp GAAGCGGAAATGCCGGCCTCGGCCCGCCGTGTGCAGCAGCCGCCCGTCGGGCAGATACAGTGGGCTCGCTaGCAGGAAGACTGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: EAEMPASARRVQQPPVGQIQWAR*QEDCLS
Trigger: GCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTAT...CTGCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp CAGCAGCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTGCACGTTCCGTGTGCAGCCTGGCCGCGTaGCCAGGGCTGCGTACCAGG +
Preference number: 2 (lower is better)
Translates to: QQLPLAHSDAMLPRARSVCSLAA*PGLRTR
Trigger: CCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGCA...CACGGAACGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR GCA 90 bp CAGCAGCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTGCACGTTCCGTGGCCAGCCGGCTGACCTaGTCCACGTTCTGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: QQLPLAHSDAMLPRARSVASRLT*STFWGH
Trigger: GTGGCCCCAGAACGTGGAGCAGGTCAGCCGGCTGGC...CACGGAACGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR GCA 90 bp CCCGTCGGGCAGCACCACCTCCAGGTTGAGCACGTTGTCCCGCATGGTGCCGTAACGCAGACGCCGCCCTaGACAGCACAGACGCCACCC +
Preference number: 2 (lower is better)
Translates to: PVGQHHLQVEHVVPHGAVTQTPP*TAQTPP
Trigger: GGGTGGCGTCTGTGCTGTGCAGGGCGGCGTCTGCGT...TACGGCACCATGCGGGACAACGTGCTCAACCTGGAGGTGGTGCTGCCCGACGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp GGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTGCGGCAGTGGACACGTaGGAGCCGCCCACCACGGCC +
Preference number: 2 (lower is better)
Translates to: GLGPRYSGLAGRKTASASAAVDT*EPPTTA
Trigger: GGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGC...AGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CAA 90 bp CCTGGGTCCACGGGAAACCAGAGGCCGCTGTCCCGCAGGTGGGCGTaGAGGGCTTTGCGGGTGACACCTGGCTCCACCACCACAGAGAAG +
Preference number: 2 (lower is better)
Translates to: PGSTGNQRPLSRRWA*RALRVTPGSTTTEK
Trigger: CTTCTCTGTGGTGGTGGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCTCTGGTTTCCCGTGGACCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp TGGTCTGCACCACGATCTCCGGCAGCCGGGAGATGGGCACACACACATCCGTGGAAGGGGGAAGGGTCCTaGGACCCCGGCAGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: WSAPRSPAAGRWAHTHPWKGEGS*DPGSGR
Trigger: CCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTT...CCACGGATGTGTGTGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp GAAGCGGAAATGCCGGCCTCGGCCCGCCGTGTGCAGCAGCCGCCCGTCGGGCAGACAGAGAAGTCCTCCTaGTTCAGCTCCAGGATTCGG +
Preference number: 2 (lower is better)
Translates to: EAEMPASARRVQQPPVGQTEKSS*FSSRIR
Trigger: CCGAATCCTGGAGCTGAACCAGGAGGACTTCTCTGT...CTGCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CAA 90 bp ACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATGATGGGCACACCTaGGCGATAGCACAGGGCTGCCAGCCGGCTGACCTGCTCCACGTT +
Preference number: 2 (lower is better)
Translates to: TLKPGAGAEWDDGHT*AIAQGCQPADLLHV
Trigger: AACGTGGAGCAGGTCAGCCGGCTGGCAGCCCTGTGCTATCGCCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGGCTTGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR GCA 90 bp CCTGAGGCATTCAGATCCTCCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGCCGCGTGGCCAGGGCTaGGTACCAGGCATTGTGCCG +
Preference number: 2 (lower is better)
Translates to: PEAFRSSLVCTTISGSREPRGQG*VPGIVP
Trigger: CGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGG...CTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAATGCCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp TCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGGAGGAAGCAGCTTTGCTaGGAACCACCCTGGGTCGTT +
Preference number: 2 (lower is better)
Translates to: SPGEGGRVLGPRQWEASGRKQLC*EPPWVV
Trigger: AACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCT...CCCCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp AGCCCTTGCAGCCTGGCCGCGTGGCCAGGGCTGCGTACCAGGCATTGTGCCGTGACGGGCACTGCAGCCTaGAGGATGTGTACAGTGCTG +
Preference number: 2 (lower is better)
Translates to: SPCSLAAWPGLRTRHCAVTGTAA*RMCTVL
Trigger: CAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGT...CACGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGCAAGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR TCA 90 bp GCCCTGCACAGCACAGACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATGCAGGGGCCGTGGCATaGAGAAAAGTTCCAGAACCG +
Preference number: 2 (lower is better)
Translates to: ALHSTDATLKPGAGAEWDAGAVA*RKVPEP
Trigger: CGGTTCTGGAACTTTTCTTCATGCCACGGCCCCTGC...ATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGTCTGTGCTGTGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp GCGGGCTACGGGCACTGCAGCCTGGAGGATGTGTACAGTGCTGTCCACAGCAGCTGGGCCCTCTGGCCTTaGGCCCAGATACAGTGGGCT +
Preference number: 2 (lower is better)
Translates to: AGYGHCSLEDVYSAVHSSWALWP*AQIQWA
Trigger: AGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCA...GCTGCTGTGGACAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp TCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGCTCTCTTCCCGCCAAGGGGGAAGGGTCCTaGGACCCCGGCAGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SGRGVIRVLNGPRRSLPAKGEGS*DPGSGR
Trigger: CCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTT...GGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp ATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCGTAGCGGACCGCGTTaGTCCCCGACGCCCCGGTGG +
Preference number: 2 (lower is better)
Translates to: IPGKECSCHQVKGEGSWDRSGPR*SPTPRW
Trigger: CCACCGGGGCGTCGGGGACCAACGCGGTCCGCTACG...GTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CAA 90 bp AGGGAGGTAACACGGTGCTCAGGCTTCTCTCTGGGCCCTCTGGCCTaGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: REVTRCSGFSLGPLA*GPDTVGSLAGRLPQ
Trigger: CTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGAAGCCTGAGCACCGTGTTACCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR TCA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGTGTCATCAGAGTCTTaGATGGACCCAGACGCTCTC +
Preference number: 2 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRVSSES*MDPDAL
Trigger: GAGAGCGTCTGGGTCCATTCAAGACTCTGATGACAC...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR GCA 90 bp GGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCGAGAGGAAGCAGCTTTaGTGGGAACCACCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: GKECSCHQVKGEGSWDPGERKQL*WEPPWV
Trigger: GACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCTCTC...GCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp GGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCATACAGTGGGCTCGCTaGCAGGAAGACTGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: GKECSCHQVKGEGSWDPGIQWAR*QEDCLS
Trigger: GCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTAT...GCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp GCGGGCTACGGGCACTGCAGCCTGGAGGATGTGTACAGTGCTGTCCACAGCAGCACCTGCTCCACGTTCTaGGGCCACACCACAGCATCA +
Preference number: 2 (lower is better)
Translates to: AGYGHCSLEDVYSAVHSSTCSTF*GHTTAS
Trigger: TGATGCTGTGGTGTGGCCCCAGAACGTGGAGCAGGT...GCTGCTGTGGACAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp CTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGATGGGCCCAGATACAGTaGGCTCGCTGGCAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: LGTTLGRLLNQRLLGPARWAQIQ*ARWQED
Trigger: GTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCA...TCTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCCGCTGTCCCGCAGGTaGGCGTTGAGGGCTTTGCGG +
Preference number: 2 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYPLSRR*ALRALR
Trigger: CCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGG...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CAA 90 bp TCTGCAAAAGCCTTGACCCTGCCCAGTTCCTCGGCGTCATCAGGGTaGACCAGCAGGATGCAGTGGAAGTTGCCGTCACCCACATGCCCG +
Preference number: 2 (lower is better)
Translates to: SAKALTLPSSSASSG*TSRMQWKLPSPTCP
Trigger: CGGGCATGTGGGTGACGGCAACTTCCACTGCATCCTGCTGGTCAACCCTGATGACGCCGAGGAACTGGGCAGGGTCAAGGCTTTTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR TCA 90 bp TTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCACGAAGAGCCCCGTaGGGTTGTAGCCGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: LGPDTVGSLAGRLPQHLFPRRAP*GCSRLH
Trigger: GTGCAGCCGGCTACAACCTCACGGGGCTCTTCGTGG...AAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR GCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACGCGATAGCACAGGGCTaGCAGCCGGCTGACCTGCTC +
Preference number: 2 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYAIAQG*QPADLL
Trigger: GAGCAGGTCAGCCGGCTGGCAGCCCTGTGCTATCGC...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR GCA 90 bp GAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGCCGTGGAGTAGCCCTTaGAGCCTGGCCGCGTGGCCA +
Preference number: 2 (lower is better)
Translates to: EKFQNRLRSQGTCGLSAQPWSSP*SLAAWP
Trigger: TGGCCACGCGGCCAGGCTGCAAGGGCTACTCCACGG...CTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR TCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTGGGCTGCCAGCCGGCTaGCCTGCTCCACGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECGLPAG*PAPRSG
Trigger: CCCAGAACGTGGAGCAGGTCAGCCGGCTGGCAGCCC...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR GCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAAGGGAGGTAACACGGTaGTCAGGCTTCTCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPREVTR*SGFSLG
Trigger: GCCCAGAGAGAAGCCTGAGCACCGTGTTACCTCCCT...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR GCA 90 bp GTCTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGAGGAAGCAGCTTTaGTGGGAACCACCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: VLNGPRRSLPARTGCVGAERKQL*WEPPWV
Trigger: GACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCTCTC...TGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR GCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGGATGCAGTGGAAGTTaGCGTCACCCACATGCCCGA +
Preference number: 2 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPGCSGS*RHPHAR
Trigger: TCGGGCATGTGGGTGACGGCAACTTCCACTGCATCC...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp CCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCTCCTTGCAGGGGCCGTaGCATGAAGAAAAGTTCCAG +
Preference number: 2 (lower is better)
Translates to: PGKECSCHQVKGEGSWDPSLQGP*HEEKFQ
Trigger: CTGGAACTTTTCTTCATGCCACGGCCCCTGCAAGGA...GGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp GGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCCATCAGAGTCTTGAATaGACCCAGACGCTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: GKECSCHQVKGEGSWDPGHQSLE*TQTLSS
Trigger: GGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATG...GCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp GGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGGTGCCGGTGCCGAATaGGATGATGGGCACACCTTG +
Preference number: 2 (lower is better)
Translates to: GSSRSIPGKECSCHQVKGGAGAE*DDGHTL
Trigger: CAAGGTGTGCCCATCATCCCATTCGGCACCGGCACC...CCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCTCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CAA 90 bp AGTTCCTCGGCGTCATCAGGGTTGACCAGCAGGATGCAGTGGAAGTaGCCGTCACCCACATGCCCGACAATGCTTCCTGTGAGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: SSSASSGLTSRMQWK*PSPTCPTMLPVSPE
Trigger: CTCAGGACTCACAGGAAGCATTGTCGGGCATGTGGGTGACGGCAACTTCCACTGCATCCTGCTGGTCAACCCTGATGACGCCGAGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CAA 90 bp TCAGGGAACTTGTGGGCTAAGTGCTCAGACCCCCTTCACAGCACTTaGCCTGGATTCATGAGGCCTTGGGGGTCTAGCACGGCCTTGAGC +
Preference number: 2 (lower is better)
Translates to: SGNLWAKCSDPLHST*PGFMRPWGSSTALS
Trigger: GCTCAAGGCCGTGCTAGACCCCCAAGGCCTCATGAATCCAGGCAAAGTGCTGTGAAGGGGGTCTGAGCACTTAGCCCACAAGTTCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR GCA 90 bp TTCAGATCCTCCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGATGGGCACACAGCATCTATTTCCTTaGAGGGGCCGTGGCATGAAG +
Preference number: 2 (lower is better)
Translates to: FRSSLVCTTISGSREMGTQHLFP*RGRGMK
Trigger: CTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTG...TGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp CTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGATCCTTGCAGGGGCCGTaGCATGAAGAAAAGTTCCAG +
Preference number: 2 (lower is better)
Translates to: LGTTLGRLLNQRLLGPARSLQGP*HEEKFQ
Trigger: CTGGAACTTTTCTTCATGCCACGGCCCCTGCAAGGA...TCTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp AGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAATGGGCCCTCTGGCCTTaGGCCCAGATACAGTGGGCT +
Preference number: 2 (lower is better)
Translates to: SSRSIPGKECSCHQVKGEWALWP*AQIQWA
Trigger: AGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCA...TTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAAGGAAGCAGCTTTGCTaGGAACCACCCTGGGTCGTT +
Preference number: 2 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPRKQLC*EPPWVV
Trigger: AACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCT...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR TCA 90 bp GGAAGCAGCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGCAGGGGCCGTGGCATaGAGAAAAGTTCCAGAACCG +
Preference number: 2 (lower is better)
Translates to: GSSFAGNHPGSFTEPKAPAGAVA*RKVPEP
Trigger: CGGTTCTGGAACTTTTCTTCATGCCACGGCCCCTGC...AGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR TCA 90 bp TTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTGCAGGGGCCGTGGCATaGAGAAAAGTTCCAGAACCG +
Preference number: 2 (lower is better)
Translates to: LGPDTVGSLAGRLPQHLFAGAVA*RKVPEP
Trigger: CGGTTCTGGAACTTTTCTTCATGCCACGGCCCCTGC...AAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR TCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGTGTCATCAGAGTCTTaGATGGACCCAGACGCTCTC +
Preference number: 2 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPVSSES*MDPDAL
Trigger: GAGAGCGTCTGGGTCCATTCAAGACTCTGATGACAC...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR GCA 90 bp GTCTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCACAGCATCTATTTCCTTaGAGGGGCCGTGGCATGAAG +
Preference number: 2 (lower is better)
Translates to: VLNGPRRSLPARTGCVGAQHLFP*RGRGMK
Trigger: CTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTG...TGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR GCA 90 bp TTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTGAGAGGAAGCAGCTTTaGTGGGAACCACCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: LGPDTVGSLAGRLPQHLFERKQL*WEPPWV
Trigger: GACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCTCTC...AAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR GCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTGGAGGTTCGCACCTGTaGACCGACTCATCGCGCCCG +
Preference number: 2 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECGGSHL*TDSSRP
Trigger: CGGGCGCGATGAGTCGGTGCACAGGTGCGAACCTCC...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp TTCAGATCCTCCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGATGGGCACAACTCCAGGAAGAGTGTaGGCGCCACTAAGCAATTCA +
Preference number: 2 (lower is better)
Translates to: FRSSLVCTTISGSREMGTTPGRV*APLSNS
Trigger: TGAATTGCTTAGTGGCGCCCACACTCTTCCTGGAGT...TGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTGGGCCCTCTGGCCTTaGGCCCAGATACAGTGGGCT +
Preference number: 2 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECWALWP*AQIQWA
Trigger: AGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCA...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR GCA 90 bp ATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCGCTGGCAGGAAGACTaGCTCAGCATCTATTTCCTT +
Preference number: 2 (lower is better)
Translates to: IPGKECSCHQVKGEGSWDRWQED*LSIYFL
Trigger: AAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCG...GTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CCA 90 bp AGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAATTTGCGGGTGACACCTaGCTCCACCACCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: SSRSIPGKECSCHQVKGEFAGDT*LHHHRE
Trigger: TTCTCTGTGGTGGTGGAGCCAGGTGTCACCCGCAAA...TTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CCA 90 bp TCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGCTCTCTTCCCGCCTTATTACAGATTTATTaGGGGAGGCCCCAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SGRGVIRVLNGPRRSLPALLQIY*GRPQGE
Trigger: TTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAA...GGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
3UTR CAA 90 bp AGGAAGAGTGTGGGCGCCACTAAGCAATTCAGCTTGCTGTACCTGTaGCAGGCATCCATCATGACTTCATCCAGGAACTCAATGCGGGCT +
Preference number: 2 (lower is better)
Translates to: RKSVGATKQFSLLYL*QASIMTSSRNSMRA
Trigger: AGCCCGCATTGAGTTCCTGGATGAAGTCATGATGGATGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAGTGGCGCCCACACTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CAA 90 bp CCATGGAACTCCAGGAAGAGTGTGGGCGCCACTAAGCAATTCAGCTaGCTGTACCTGTTGCAGGCATCCATCATGACTTCATCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: PWNSRKSVGATKQFS*LYLLQASIMTSSRN
Trigger: GTTCCTGGATGAAGTCATGATGGATGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAGTGGCGCCCACACTCTTCCTGGAGTTCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR GCA 90 bp TATTACAGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGAGGGAGGTAACACGGTaGTCAGGCTTCTCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: YYRFIGGGPKEKTYHHVTREVTR*SGFSLG
Trigger: GCCCAGAGAGAAGCCTGAGCACCGTGTTACCTCCCT...CGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
3UTR-3UTR CCA 90 bp AGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGCATCAGAGTCTTGAATaGACCCAGACGCTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RKTASASISLQGPWHEEKHQSLE*TQTLSS
Trigger: GGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATG...CTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR GCA 90 bp TTCAGGTTTATTACAGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCCAGCATCTATTTCCTTaGAGGGGCCGTGGCATGAAG +
Preference number: 2 (lower is better)
Translates to: FRFITDLLGEAPRRRPIIQHLFP*RGRGMK
Trigger: CTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTG...GATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAAACCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
3UTR-3UTR GCA 90 bp TATTACAGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGCGCTGGCAGGAAGACTaGCTCAGCATCTATTTCCTT +
Preference number: 2 (lower is better)
Translates to: YYRFIGGGPKEKTYHHVTRWQED*LSIYFL
Trigger: AAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCG...CGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
3UTR CCA 72 bp TGCCGTAGCGGACCGCGTTGGTCCCCGACGCCCCGGTaGCCGCCATGCCACAGAGAGAGGCGTCCGCGCCTG +
Preference number: 3 (lower is better)
Translates to: CRSGPRWSPTPR*PPCHRERRPRL
Trigger: CAGGCGCGGACGCCTCTCTCTGTGGCATGGCGGCCACCGGGGCGTCGGGGACCAACGCGGTCCGCTACGGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 72 bp AAGCCGAAGCGGAAATGCCGGCCTCGGCCCGCCGTGTaGAGCAGCCGCCCGTCGGGCAGCACCACCTCCAGG +
Preference number: 3 (lower is better)
Translates to: KPKRKCRPRPAV*SSRPSGSTTSR
Trigger: CCTGGAGGTGGTGCTGCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGCTTCGGCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 72 bp CCTGGCCGCGTGGCCAGGGCTGCGTACCAGGCATTGTaGCGTGCTGTCCAAAGCCGGCTGCGCTCCTCGGCC +
Preference number: 3 (lower is better)
Translates to: PGRVARAAYQAL*RAVQSRLRSSA
Trigger: GGCCGAGGAGCGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGGCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp CATCGCGCCCGTGCTGCTCTCGGACCACCGCGGCAGTaGACACGTGGGAGCCGCCCACCACGGCCTTCAGAG +
Preference number: 3 (lower is better)
Translates to: HRARAALGPPRQ*TRGSRPPRPSE
Trigger: CTCTGAAGGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAGCACGGGCGCGATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp GCACGTTGTCCCGCATGGTGCCGTAGCGGACCGCGTTaGTCCCCGACGCCCCGGTGGCCGCCATGCCACAGA +
Preference number: 3 (lower is better)
Translates to: ARCPAWCRSGPR*SPTPRWPPCHR
Trigger: TCTGTGGCATGGCGGCCACCGGGGCGTCGGGGACCAACGCGGTCCGCTACGGCACCATGCGGGACAACGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp CCTGGACACTGGGGAACGCACACGTGGCGGCCACTGTaGCCTCAGGGGCAGGGTGCAGGCGCAGGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: PGHWGTHTWRPL*PQGQGAGAGWW
Trigger: CCACCACCCTGCGCCTGCACCCTGCCCCTGAGGCCACAGTGGCCGCCACGTGTGCGTTCCCCAGTGTCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp CCGTGCTGCTCTCGGACCACCGCGGCAGTGGACACGTaGGAGCCGCCCACCACGGCCTTCAGAGCCTCTACG +
Preference number: 3 (lower is better)
Translates to: PCCSRTTAAVDT*EPPTTAFRAST
Trigger: CGTAGAGGCTCTGAAGGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAGCACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 72 bp GGTTCGCACCTGTGCACCGACTCATCGCGCCCGTGCTaGTCTCGGACCACCGCGGCAGTGGACACGTGGGAG +
Preference number: 3 (lower is better)
Translates to: GSHLCTDSSRPC*SRTTAAVDTWE
Trigger: CTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAGCACGGGCGCGATGAGTCGGTGCACAGGTGCGAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 72 bp GGAGGTTCGCACCTGTGCACCGACTCATCGCGCCCGTaGTGCTCTCGGACCACCGCGGCAGTGGACACGTGG +
Preference number: 3 (lower is better)
Translates to: GGSHLCTDSSRP*CSRTTAAVDTW
Trigger: CCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAGCACGGGCGCGATGAGTCGGTGCACAGGTGCGAACCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 72 bp CCGCGTGGCCAGGGCTGCGTACCAGGCATTGTGCCGTaGTGTCCAAAGCCGGCTGCGCTCCTCGGCCTCCTT +
Preference number: 3 (lower is better)
Translates to: PRGQGCVPGIVP*CPKPAALLGLL
Trigger: AAGGAGGCCGAGGAGCGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 72 bp GCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTaGACGTTCCGTGGAGAGCCAGTGCCCGCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: AAACPFRCHAPP*TFRGEPVPACP
Trigger: TGGGCAGGCGGGCACTGGCTCTCCACGGAACGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 72 bp CGCATGGTCTCCACGCCCACGGCGCCCACCTCCTCCTaGAGCAGCTGCCGCTTGCCCATTCCGATGCCATGC +
Preference number: 3 (lower is better)
Translates to: RMVSTPTAPTSS*SSCRLPIPMPC
Trigger: GCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGCAGGAGGAGGTGGGCGCCGTGGGCGTGGAGACCATGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp GGGTCCACGGGAAACCAGAGGCCGCTGTCCCGCAGGTaGGCGTTGAGGGCTTTGCGGGTGACACCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: GSTGNQRPLSRR*ALRALRVTPGS
Trigger: GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCTCTGGTTTCCCGTGGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR TCA 72 bp GGCCCAGCGTCCCCTCGGAGCCCACGAAGAGCCCCGTaGGGTTGTAGCCGGCTGCACTCTTCCTACGTCCCA +
Preference number: 3 (lower is better)
Translates to: GPASPRSPRRAP*GCSRLHSSYVP
Trigger: TGGGACGTAGGAAGAGTGCAGCCGGCTACAACCTCACGGGGCTCTTCGTGGGCTCCGAGGGGACGCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CAA 90 bp GGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCCTGGGCCCTCTGGCCTaGGGCCCAGATACAGTGGGC +
Preference number: 3 (lower is better)
Translates to: GKECSCHQVKGEGSWDPGLGPLA*GPDTVG
Trigger: GCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG...GCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR TCA 72 bp CGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATaGTGGGCACACCTTGGCGATAGCACAGGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: RHPQARCRCRMG*WAHLGDSTGLP
Trigger: TGGCAGCCCTGTGCTATCGCCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp ACACATCCGTGGAGTAGCCCTTGCAGCCTGGCCGCGTaGCCAGGGCTGCGTACCAGGCATTGTGCCGTGCTG +
Preference number: 3 (lower is better)
Translates to: THPWSSPCSLAA*PGLRTRHCAVL
Trigger: CAGCACGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGCAAGGGCTACTCCACGGATGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CAA 90 bp GCGGGCTACGGGCACTGCAGCCTGGAGGATGTGTACAGTGCTGTCCACAGCAGCTGGGCGTTGAGGGCTTaGCGGGTGACACCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: AGYGHCSLEDVYSAVHSSWALRA*RVTPGS
Trigger: GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCA...GCTGCTGTGGACAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp ACAGACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATaGGATGATGGGCACACCTTGGCGATAGCACAGGGC +
Preference number: 3 (lower is better)
Translates to: TDATLKPGAGAE*DDGHTLAIAQG
Trigger: GCCCTGTGCTATCGCCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGTCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CAA 90 bp GAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGGATGATGGGCACACCTaGGCGATAGCACAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: ECSCHQVKGEGSWDPGSGDDGHT*AIAQGC
Trigger: GCAGCCCTGTGCTATCGCCAAGGTGTGCCCATCATC...CCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp CCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGATaGGCACACACACATCCGTGGAGTAGCCCTTGCAGC +
Preference number: 3 (lower is better)
Translates to: PWSAPRSPAAGR*AHTHPWSSPCS
Trigger: GCTGCAAGGGCTACTCCACGGATGTGTGTGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CAA 90 bp GGCTGTGATGAGGCCCAGCGTCCCCTCGGAGCCCACGAAGAGCCCCGTGAGGTTTCAGCATCTATTTCCTaGCAGGGGCCGTGGCATGAA +
Preference number: 3 (lower is better)
Translates to: GCDEAQRPLGAHEEPREVSASIS*QGPWHE
Trigger: TTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGA...AACCTCACGGGGCTCTTCGTGGGCTCCGAGGGGACGCTGGGCCTCATCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CAA 90 bp CCTGAGGCATTCAGATCCTCCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGAGCACCACCTCCAGGTaGAGCACGTTGTCCCGCATG +
Preference number: 3 (lower is better)
Translates to: PEAFRSSLVCTTISGSRESTTSR*STLSRM
Trigger: CATGCGGGACAACGTGCTCAACCTGGAGGTGGTGCT...CTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAATGCCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp GGAGGCCTCGGGGAGGGGTGTCATCAGAGTCTTGAATaGACCCAGACGCTCTCTTCCCGCCAGGACAGGATG +
Preference number: 3 (lower is better)
Translates to: GGLGEGCHQSLE*TQTLSSRQDRM
Trigger: CATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGAGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CAA 90 bp CAGCAGCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTGCACGTTCCGTGGGTGTCATCAGAGTCTaGAATGGACCCAGACGCTCT +
Preference number: 3 (lower is better)
Translates to: QQLPLAHSDAMLPRARSVGVIRV*NGPRRS
Trigger: AGAGCGTCTGGGTCCATTCAAGACTCTGATGACACC...CACGGAACGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR TCA 72 bp AAGCAGCTTTGCTGGGAACCACCCTGGGTCGTTTACTaGACCAAAGGCTCCTGGGGCCAGCCAGAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: KQLCWEPPWVVY*TKGSWGQPEGQ
Trigger: CTGGCCCTCTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR GCA 72 bp TGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTaGCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCA +
Preference number: 3 (lower is better)
Translates to: WAQIQWARWQED*LSIYFLAGAVA
Trigger: TGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR GCA 72 bp CCTGTGAGTCCTGAGGCATTCAGATCCTCCTTGGTCTaGACCACGATCTCCGGCAGCCGGGAGATGGGCACA +
Preference number: 3 (lower is better)
Translates to: PVSPEAFRSSLV*TTISGSREMGT
Trigger: TGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAATGCCTCAGGACTCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp TCTCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTaGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTAT +
Preference number: 3 (lower is better)
Translates to: SLWALWPWAQIQ*ARWQEDCLSIY
Trigger: ATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CCA 72 bp TCCAGGAACTCAATGCGGGCTACGGGCACTGCAGCCTaGAGGATGTGTACAGTGCTGTCCACAGCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: SRNSMRATGTAA*RMCTVLSTAAW
Trigger: CCAGGCTGCTGTGGACAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGCATTGAGTTCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CCA 72 bp GCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTaGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCA +
Preference number: 3 (lower is better)
Translates to: ALWPWAQIQWAR*QEDCLSIYFLA
Trigger: TGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR-3UTR CAA 90 bp GAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTCTGGGCCCTCTGGCCTaGGGCCCAGATACAGTGGGC +
Preference number: 3 (lower is better)
Translates to: EKTYHHVTGAHVPYQERSLGPLA*GPDTVG
Trigger: GCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG...ACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR GCA 72 bp AAGTCCTCCTGGTTCAGCTCCAGGATTCGGTCCATATaGGTCAGGTTAACGCAGACGCCGCCCTGCACAGCA +
Preference number: 3 (lower is better)
Translates to: KSSWFSSRIRSI*VRLTQTPPCTA
Trigger: TGCTGTGCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGACCGAATCCTGGAGCTGAACCAGGAGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR GCA 72 bp ACCAGCAGGATGCAGTGGAAGTTGCCGTCACCCACATaGCCGACAATGCTTCCTGTGAGTCCTGAGGCATTC +
Preference number: 3 (lower is better)
Translates to: TSRMQWKLPSPT*PTMLPVSPEAF
Trigger: GAATGCCTCAGGACTCACAGGAAGCATTGTCGGGCATGTGGGTGACGGCAACTTCCACTGCATCCTGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CAA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACTCAGCATCTATTTCCTaGCAGGGGCCGTGGCATGAA +
Preference number: 3 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYSASIS*QGPWHE
Trigger: TTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGA...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR GCA 72 bp TCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTaGAGGGGCCGTGGCATGAAGAAAAGTTCCAGAACC +
Preference number: 3 (lower is better)
Translates to: SLAGRLPQHLFP*RGRGMKKSSRT
Trigger: GGTTCTGGAACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CCA 72 bp AAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTaGCATGAAGAAAAGTTCCAGAACCGGCTCCGTAGT +
Preference number: 3 (lower is better)
Translates to: KTASASISLQGP*HEEKFQNRLRS
Trigger: ACTACGGAGCCGGTTCTGGAACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR TCA 72 bp AATTCAGCTTGCTGTACCTGTTGCAGGCATCCATCATaGCTTCATCCAGGAACTCAATGCGGGCTACGGGCA +
Preference number: 3 (lower is better)
Translates to: NSACCTCCRHPS*LHPGTQCGLRA
Trigger: TGCCCGTAGCCCGCATTGAGTTCCTGGATGAAGTCATGATGGATGCCTGCAACAGGTACAGCAAGCTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR-3UTR CAA 90 bp GAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGTTTATTACAGATTTATaGGGGGAGGCCCCAAGGAGA +
Preference number: 3 (lower is better)
Translates to: EKFQNRLRSQGTCGLSAQFITDL*GEAPRR
Trigger: TCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAAA...CTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
3UTR-3UTR CAA 90 bp GGTTTCAGGTTTATTACAGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCTCAGCATCTATTTCCTaGCAGGGGCCGTGGCATGAA +
Preference number: 3 (lower is better)
Translates to: GFRFITDLLGEAPRRRPISASIS*QGPWHE
Trigger: TTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGA...GATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAAACCTGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CCA 90 bp CTGCTCTCGGACCACCGCGGCAGTGGACACGTGGGAGCCGCCCACCACGGCCTTCGTAGCGGACCGCGTTaGTCCCCGACGCCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSDHRGSGHVGAAHHGLRSGPR*SPTPRW
Trigger: CCACCGGGGCGTCGGGGACCAACGCGGTCCGCTACG...AAGGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CTGCTCTCGGACCACCGCGGCAGTGGACACGTGGGAGCCGCCCACCACGGCCTTGTAGCCCTTGCAGCCTaGCCGCGTGGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLSDHRGSGHVGAAHHGLVALAA*PRGQGC
Trigger: GCAGCCCTGGCCACGCGGCCAGGCTGCAAGGGCTAC...AAGGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGTGCAGCCTGGCCGCGTaGCCAGGGCTGCGTACCAGG +
Preference number: 4 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRCSLAA*PGLRTR
Trigger: CCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGCA...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CAA 72 bp CAGCCTGGCCGCGTGGCCAGGGCTGCGTACCAGGCATaGTGCCGTGCTGTCCAAAGCCGGCTGCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QPGRVARAAYQA*CRAVQSRLRSS
Trigger: CGAGGAGCGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGACGCAGACGCCGCCCTaGACAGCACAGACGCCACCC +
Preference number: 4 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRTQTPP*TAQTPP
Trigger: GGGTGGCGTCTGTGCTGTGCAGGGCGGCGTCTGCGT...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGGCGTTGTCCCGCATGGTaGCGTAGCGGACCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SPGEGGRVLGPRQWEASGRCPAW*RSGPRW
Trigger: CCAACGCGGTCCGCTACGGCACCATGCGGGACAACG...CCCCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGGGCGGGCTACGGGCACTaGAGCCTGGAGGATGTGTAC +
Preference number: 4 (lower is better)
Translates to: SPGEGGRVLGPRQWEASGAGYGH*SLEDVY
Trigger: GTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGC...CCCCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAAGCGGAAATGCCGGCCTCGGCCCGCCGTGTGCAGCAGCCGCCCGTCGGGCAGAGGGAGGTAACACGGTaGTCAGGCTTCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EAEMPASARRVQQPPVGQREVTR*SGFSLG
Trigger: GCCCAGAGAGAAGCCTGAGCACCGTGTTACCTCCCT...CTGCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp TCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACGTAGCGGACCGCGTTaGTCCCCGACGCCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SLGPLALGPDTVGSLAGRRSGPR*SPTPRW
Trigger: CCACCGGGGCGTCGGGGACCAACGCGGTCCGCTACG...TCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGCAGCAGCCTGGACACTaGGGAACGCACACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRQQPGH*GTHTWR
Trigger: CCGCCACGTGTGCGTTCCCCAGTGTCCAGGCTGCTG...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGTGCAGCCTGGCCGCGTaGCCAGGGCTGCGTACCAGG +
Preference number: 4 (lower is better)
Translates to: ECSCHQVKGEGSWDPGSGCSLAA*PGLRTR
Trigger: CCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGCA...CCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGCTGTGATGAGGCCCAGCGTCCCCTCGGAGCCCACGAAGAGCCCCGTGAGGTTCCCGTGCACGTTCCGTaGAGAGCCAGTGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GCDEAQRPLGAHEEPREVPVHVP*RASARL
Trigger: CAGGCGGGCACTGGCTCTCCACGGAACGTGCACGGG...AACCTCACGGGGCTCTTCGTGGGCTCCGAGGGGACGCTGGGCCTCATCACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR TCA 90 bp AGCAGCCGCCCGTCGGGCAGCACCACCTCCAGGTTGAGCACGTTGTCCCGCATGCCACGAAGAGCCCCGTaGGGTTGTAGCCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SSRPSGSTTSRLSTLSRMPRRAP*GCSRLH
Trigger: GTGCAGCCGGCTACAACCTCACGGGGCTCTTCGTGG...CATGCGGGACAACGTGCTCAACCTGGAGGTGGTGCTGCCCGACGGGCGGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp GCCCTGCACAGCACAGACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATGCGATAGCACAGGGCTaGCAGCCGGCTGACCTGCTC +
Preference number: 4 (lower is better)
Translates to: ALHSTDATLKPGAGAEWDAIAQG*QPADLL
Trigger: GAGCAGGTCAGCCGGCTGGCAGCCCTGTGCTATCGC...ATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGTCTGTGCTGTGCAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCGTGGAGTAGCCCTTaGAGCCTGGCCGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLPWSSP*SLAAWP
Trigger: TGGCCACGCGGCCAGGCTGCAAGGGCTACTCCACGG...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp AGGCCGCTGTCCCGCAGGTGGGCGTTGAGGGCTTTGCGGGTGACACCTGGCTCCCCCATTCCGATGCCATaGTCCCCCGTGCACGTTCCG +
Preference number: 4 (lower is better)
Translates to: RPLSRRWALRALRVTPGSPIPMP*SPVHVP
Trigger: CGGAACGTGCACGGGGGAGCATGGCATCGGAATGGG...GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CTTCTCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGGCACTCTTCCGGAAATaGCGGCCTCGGCCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: LLSGPSGLGPRYSGLAGRALFRK*RPRPAV
Trigger: CACGGCGGGCCGAGGCCGGCATTTCCGGAAGAGTGC...CCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450168.3
CDS-3UTR CCA 90 bp TTCTCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAGGACCACCGCGGCAGTaGACACGTGGGAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: FSLGPLALGPDTVGSLAGGPPRQ*TRGSRP
Trigger: TGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCC...TCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GCCCTGCACAGCACAGACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATCCGGCAGCCGGGAGATaGGCACACACACATCCGTGG +
Preference number: 4 (lower is better)
Translates to: ALHSTDATLKPGAGAEWDPAAGR*AHTHPW
Trigger: CCACGGATGTGTGTGTGCCCATCTCCCGGCTGCCGG...ATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGTCTGTGCTGTGCAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCCGTGCACGTTCCGTaGAGAGCCAGTGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLPVHVP*RASARL
Trigger: CAGGCGGGCACTGGCTCTCCACGGAACGTGCACGGG...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGGTGGGCCCAGATACAGTaGGCTCGCTGGCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SPGEGGRVLGPRQWEASGWAQIQ*ARWQED
Trigger: GTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCA...CCCCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGTGGGCCCTCTGGCCTTaGGCCCAGATACAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRWALWP*AQIQWA
Trigger: AGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCA...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CCCGTCGGGCAGCACCACCTCCAGGTTGAGCACGTTGTCCCGCATGGTGCCGTAAAGGGGGAAGGGTCCTaGGACCCCGGCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVGQHHLQVEHVVPHGAVKGEGS*DPGSGR
Trigger: CCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTT...TACGGCACCATGCGGGACAACGTGCTCAACCTGGAGGTGGTGCTGCCCGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CAA 72 bp CCCGGTGCCGGTGCCGAATGGGATGATGGGCACACCTaGGCGATAGCACAGGGCTGCCAGCCGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: PGAGAEWDDGHT*AIAQGCQPADL
Trigger: CAGGTCAGCCGGCTGGCAGCCCTGTGCTATCGCCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
3UTR CAA 72 bp ACGGGAAACCAGAGGCCGCTGTCCCGCAGGTGGGCGTaGAGGGCTTTGCGGGTGACACCTGGCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: TGNQRPLSRRWA*RALRVTPGSTT
Trigger: GGTGGTGGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCTCTGGTTTCCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CTTCTCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGCTGTCCAAAGCCGGCTaGGCTCCTCGGCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LLSGPSGLGPRYSGLAGRLSKAG*APRPPW
Trigger: CCAAGGAGGCCGAGGAGCGCAGCCGGCTTTGGACAG...CCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGGGGATGCAGTGGAAGTTaGCGTCACCCACATGCCCGA +
Preference number: 4 (lower is better)
Translates to: SPGEGGRVLGPRQWEASGGCSGS*RHPHAR
Trigger: TCGGGCATGTGGGTGACGGCAACTTCCACTGCATCC...CCCCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CGTGCTGTCCAAAGCCGGCTGCGCTCCTCGGCCTCCTTGGCCCAGGAGAAGTCATCCGTGGAGAGCCAGTaGCCGCCTGCCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RAVQSRLRSSASLAQEKSSVESQ*PPAQLF
Trigger: GAACAGCTGGGCAGGCGGGCACTGGCTCTCCACGGA...TGACTTCTCCTGGGCCAAGGAGGCCGAGGAGCGCAGCCGGCTTTGGACAGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CACGGGAAACCAGAGGCCGCTGTCCCGCAGGTGGGCGTTGAGGGCTTTGCGGGTGCTTGCCCATTCCGATaGCATGCTCCCCCGTGCACG +
Preference number: 4 (lower is better)
Translates to: HGKPEAAVPQVGVEGFAGACPFR*HAPPCT
Trigger: CGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGC...ACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCTCTGGTTTCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp TCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGGGAGGTTGTAGCCGGCTaGACTCTTCCGGAAATGCCG +
Preference number: 4 (lower is better)
Translates to: SPGEGGRVLGPRQWEASGEVVAG*TLPEMP
Trigger: CGGCATTTCCGGAAGAGTGCAGCCGGCTACAACCTC...CCCCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450168.3
CDS-3UTR CCA 90 bp CCCGTCGGGCAGCACCACCTCCAGGTTGAGCACGTTGTCCCGCATGGTGCCGTAGCACGTTGTCCCGCATaGTGCCGTAGCGGACCGCGT +
Preference number: 4 (lower is better)
Translates to: PVGQHHLQVEHVVPHGAVARCPA*CRSGPR
Trigger: ACGCGGTCCGCTACGGCACCATGCGGGACAACGTGC...TACGGCACCATGCGGGACAACGTGCTCAACCTGGAGGTGGTGCTGCCCGACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CAGCAGCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTGCACGTTCCGTGTGGGGAACGCACACGTaGCGGCCACTGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QQLPLAHSDAMLPRARSVWGTHT*RPLWPQ
Trigger: CTGAGGCCACAGTGGCCGCCACGTGTGCGTTCCCCA...CACGGAACGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp ACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATGATGGGCACACCTTGGCAGCAGCCTGGACACTaGGGAACGCACACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TPPSSPVPVPNGMMGTPWQQPGH*GTHTWR
Trigger: CCGCCACGTGTGCGTTCCCCAGTGTCCAGGCTGCTG...CCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CCGAAGCGGAAATGCCGGCCTCGGCCCGCCGTGTGCAGCAGCCGCCCGTCGGGCACTCCAGGAAGAGTGTaGGCGCCACTAAGCAATTCA +
Preference number: 4 (lower is better)
Translates to: PKRKCRPRPAVCSSRPSGTPGRV*APLSNS
Trigger: TGAATTGCTTAGTGGCGCCCACACTCTTCCTGGAGT...GCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGCTTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp TCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACCCGTGCACGTTCCGTaGAGAGCCAGTGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SLGPLALGPDTVGSLAGRPVHVP*RASARL
Trigger: CAGGCGGGCACTGGCTCTCCACGGAACGTGCACGGG...TCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CAA 72 bp CAGAGGCCGCTGTCCCGCAGGTGGGCGTTGAGGGCTTaGCGGGTGACACCTGGCTCCACCACCACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QRPLSRRWALRA*RVTPGSTTTEK
Trigger: CTTCTCTGTGGTGGTGGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR TCA 90 bp CTGCAGCAGCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTGCACGTTCCGCACCACCTCCAGGTTaGGCACGTTGTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: LQQLPLAHSDAMLPRARSAPPPG*ARCPAW
Trigger: CCATGCGGGACAACGTGCTCAACCTGGAGGTGGTGC...GGAACGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR TCA 90 bp GAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGGGTCTAGCACGGCCTTaGGCTGCCGCATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ECSCHQVKGEGSWDPGSGGLARP*AAAWSP
Trigger: TGGAGACCATGCGGCAGCTCAAGGCCGTGCTAGACC...CCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCACGCAGACGCCGCCCTaGACAGCACAGACGCCACCC +
Preference number: 4 (lower is better)
Translates to: PGKECSCHQVKGEGSWDPTQTPP*TAQTPP
Trigger: GGGTGGCGTCTGTGCTGTGCAGGGCGGCGTCTGCGT...GGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCCCCCGGTGGCCGCCATaGCACAGAGAGAGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: QWARWQEDCLSIYFLAGAPRWPP*HRERRP
Trigger: CGGACGCCTCTCTCTGTGGCATGGCGGCCACCGGGG...GGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACGTTGTCCCGCATGGTaGCGTAGCGGACCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SLGPLALGPDTVGSLAGRRCPAW*RSGPRW
Trigger: CCAACGCGGTCCGCTACGGCACCATGCGGGACAACG...TCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTAAGCCGAAGCGGAAATaGCGGCCTCGGCCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: GLGPRYSGLAGRKTASASKPKRK*RPRPAV
Trigger: CACGGCGGGCCGAGGCCGGCATTTCCGCTTCGGCTT...AGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000569876.2
CDS-3UTR GCA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGCATCCAGGAACTCAATaGGGGCTACGGGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRHPGTQ*GLRALQ
Trigger: CTGCAGTGCCCGTAGCCCGCATTGAGTTCCTGGATG...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCACCGCGTGGCCAGGGCTaGGTACCAGGCATTGTGCCG +
Preference number: 4 (lower is better)
Translates to: SGLGPRYSGLAGRKTASAPRGQG*VPGIVP
Trigger: CGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGG...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCCCGCGTGGCCAGGGCTaGGTACCAGGCATTGTGCCG +
Preference number: 4 (lower is better)
Translates to: PGKECSCHQVKGEGSWDPPRGQG*VPGIVP
Trigger: CGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGG...GGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp AGGCCGCTGTCCCGCAGGTGGGCGTTGAGGGCTTTGCGGGTGACACCTGGCTCCAGATCCTCCTTGGTCTaGACCACGATCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RPLSRRWALRALRVTPGSRSSLV*TTISGS
Trigger: GCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCT...GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGTGCCATGCTCCCCCGTaGACGTTCCGTGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLCHAPP*TFRGEP
Trigger: TGGCTCTCCACGGAACGTGCACGGGGGAGCATGGCA...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGCCCATTCCGATGCCATaGTCCCCCGTGCACGTTCCG +
Preference number: 4 (lower is better)
Translates to: ECSCHQVKGEGSWDPGSGPIPMP*SPVHVP
Trigger: CGGAACGTGCACGGGGGAGCATGGCATCGGAATGGG...CCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGAGGAAGCAGCTTTGCGCGCCCACCTCCTCCTaGAGCAGCTGCCGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RSLPARTGCVGAERKQLCAPTSS*SSCRLP
Trigger: GGGCAAGCGGCAGCTGCTGCAGGAGGAGGTGGGCGC...GCAAAGCTGCTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCCCTGCACAGCACAGACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATTCAGAGGCTCCGTTCTaGTGGACTGTGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALHSTDATLKPGAGAEWDSEAPF*WTVRCS
Trigger: GCTGCAGCGCACAGTCCAGCAGAACGGAGCCTCTGA...ATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGTCTGTGCTGTGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGCGGCAGTGGACACGTaGGAGCCGCCCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: LEWTQTLSSRQDRMRRSRAAVDT*EPPTTA
Trigger: GGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGC...TCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGCACACACACATCCGTaGAGTAGCCCTTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRAHTHP*SSPCSL
Trigger: CAGGCTGCAAGGGCTACTCCACGGATGTGTGTGTGC...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp AGGCCGCTGTCCCGCAGGTGGGCGTTGAGGGCTTTGCGGGTGACACCTGGCTCCATACAGTGGGCTCGCTaGCAGGAAGACTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RPLSRRWALRALRVTPGSIQWAR*QEDCLS
Trigger: GCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTAT...GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CACGGGAAACCAGAGGCCGCTGTCCCGCAGGTGGGCGTTGAGGGCTTTGCGGGTTGGGCCCAGATACAGTaGGCTCGCTGGCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: HGKPEAAVPQVGVEGFAGWAQIQ*ARWQED
Trigger: GTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCA...ACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCTCTGGTTTCCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp GCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGAAGGGGGAAGGGTCCTaGGACCCCGGCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AGNHPGSFTEPKAPGASQKGEGS*DPGSGR
Trigger: CCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTT...CTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGGGCTGCCAGCCGGCTaGCCTGCTCCACGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPGLPAG*PAPRSG
Trigger: CCCAGAACGTGGAGCAGGTCAGCCGGCTGGCAGCCC...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp CCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCCCACGAAGAGCCCCGTaGGGTTGTAGCCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PGKECSCHQVKGEGSWDPPRRAP*GCSRLH
Trigger: GTGCAGCCGGCTACAACCTCACGGGGCTCTTCGTGG...GGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCACCACGAAGAGCCCCGTaGGGTTGTAGCCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SGLGPRYSGLAGRKTASAPRRAP*GCSRLH
Trigger: GTGCAGCCGGCTACAACCTCACGGGGCTCTTCGTGG...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGAGGTTCGCACCTGTaGACCGACTCATCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: PGKECSCHQVKGEGSWDPGGSHL*TDSSRP
Trigger: CGGGCGCGATGAGTCGGTGCACAGGTGCGAACCTCC...GGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGCCAGCCGGCTGACCTaGTCCACGTTCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: QWARWQEDCLSIYFLAGAASRLT*STFWGH
Trigger: GTGGCCCCAGAACGTGGAGCAGGTCAGCCGGCTGGC...GGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGGCGATAGCACAGGGCTaGCAGCCGGCTGACCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGNHPGSFTEPKAPGASQAIAQG*QPADLL
Trigger: GAGCAGGTCAGCCGGCTGGCAGCCCTGTGCTATCGC...CTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGCGATAGCACAGGGCTaGCAGCCGGCTGACCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGKECSCHQVKGEGSWDPAIAQG*QPADLL
Trigger: GAGCAGGTCAGCCGGCTGGCAGCCCTGTGCTATCGC...GGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CAGAGTCTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGCCCCGGTGGCCGCCATaGCACAGAGAGAGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: QSLEWTQTLSSRQDRMRRPRWPP*HRERRP
Trigger: CGGACGCCTCTCTCTGTGGCATGGCGGCCACCGGGG...CCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TTCTCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAGCGGGCTACGGGCACTaGAGCCTGGAGGATGTGTAC +
Preference number: 4 (lower is better)
Translates to: FSLGPLALGPDTVGSLAGAGYGH*SLEDVY
Trigger: GTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGC...TCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCCTGTCCAAAGCCGGCTaGGCTCCTCGGCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGKECSCHQVKGEGSWDPLSKAG*APRPPW
Trigger: CCAAGGAGGCCGAGGAGCGCAGCCGGCTTTGGACAG...GGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGAGGAAGCAGCTTTGCCCGTGGAGTAGCCCTTaGAGCCTGGCCGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSLPARTGCVGAERKQLCPWSSP*SLAAWP
Trigger: TGGCCACGCGGCCAGGCTGCAAGGGCTACTCCACGG...GCAAAGCTGCTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGGAGCCAGTGCCCGCCTaGCCAGCTGTTCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLEPVPA*PAVLQK
Trigger: CTTTTGCAGAACAGCTGGGCAGGCGGGCACTGGCTC...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGGAGCCAGTGCCCGCCTaGCCAGCTGTTCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: ECSCHQVKGEGSWDPGSGEPVPA*PAVLQK
Trigger: CTTTTGCAGAACAGCTGGGCAGGCGGGCACTGGCTC...CCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCGGGCTACGGGCACTGCAGCCTGGAGGATGTGTACAGTGCTGTCCACAGCAGCTGCCATGCTCCCCCGTaGACGTTCCGTGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: AGYGHCSLEDVYSAVHSSCHAPP*TFRGEP
Trigger: TGGCTCTCCACGGAACGTGCACGGGGGAGCATGGCA...GCTGCTGTGGACAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGGCAGCAGCTGCCGCTTaGCCATTCCGATGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLAAAAA*PFRCHA
Trigger: AGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGC...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp AAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGAGCACGGCCTTGAGCTaGCGCATGGTCTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: KGVFLSPGEGGRVLGPRQSTALS*RMVSTP
Trigger: GGGCGTGGAGACCATGCGGCAGCTCAAGGCCGTGCT...CTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CTGCAGCAGCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTGCACGTTCCGGTGCCGGTGCCGAATaGGATGATGGGCACACCTTG +
Preference number: 4 (lower is better)
Translates to: LQQLPLAHSDAMLPRARSGAGAE*DDGHTL
Trigger: CAAGGTGTGCCCATCATCCCATTCGGCACCGGCACC...GGAACGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGAGGAAGCAGCTTTGCCCGCTGTCCCGCAGGTaGGCGTTGAGGGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: RSLPARTGCVGAERKQLCPLSRR*ALRALR
Trigger: CCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGG...GCAAAGCTGCTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp AGCAGCCGCCCGTCGGGCAGCACCACCTCCAGGTTGAGCACGTTGTCCCGCATGACGGGCACTGCAGCCTaGAGGATGTGTACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSRPSGSTTSRLSTLSRMTGTAA*RMCTVL
Trigger: CAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGT...CATGCGGGACAACGTGCTCAACCTGGAGGTGGTGCTGCCCGACGGGCGGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CTGCAGCAGCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTGCACGTTCCTCCTCCAGTGCCTGCTaGGAGCCATGGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LQQLPLAHSDAMLPRARSSSSAC*EPWNSR
Trigger: CCTGGAGTTCCATGGCTCCCAGCAGGCACTGGAGGA...GGAACGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATTGCAGCCTGGCCGCGTaGCCAGGGCTGCGTACCAGG +
Preference number: 4 (lower is better)
Translates to: LAGRKTASASISLQGPWHCSLAA*PGLRTR
Trigger: CCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGCA...ATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CCGCGGCAGTGGACACGTGGGAGCCGCCCACCACGGCCTTCAGAGCCTCTACGAAGGAAGCAGCTTTGCTaGGAACCACCCTGGGTCGTT +
Preference number: 4 (lower is better)
Translates to: PRQWTRGSRPPRPSEPLRRKQLC*EPPWVV
Trigger: AACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCT...TCGTAGAGGCTCTGAAGGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR TCA 90 bp TCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACGGCGTCATCAGGGTTaGCCAGCAGGATGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SLGPLALGPDTVGSLAGRRRHQG*PAGCSG
Trigger: TCCACTGCATCCTGCTGGTCAACCCTGATGACGCCG...TCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp ACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATGATGGGCACACCTTGGGCAGGGGCCGTGGCATaGAGAAAAGTTCCAGAACCG +
Preference number: 4 (lower is better)
Translates to: TPPSSPVPVPNGMMGTPWAGAVA*RKVPEP
Trigger: CGGTTCTGGAACTTTTCTTCATGCCACGGCCCCTGC...CCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGGCAGAGCTCTCCCTTTaGCTTCTGGGAGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLAELSL*LLGAVA
Trigger: GGCTACTGCTCCCAGAAGGCAAAGGGAGAGCTCTGC...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp CTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGACTCATCGCGCCCGTaGTGCTCTCGGACCACCGCG +
Preference number: 4 (lower is better)
Translates to: LAGRKTASASISLQGPWHDSSRP*CSRTTA
Trigger: CGCGGTGGTCCGAGAGCAGCACGGGCGCGATGAGTC...ATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCACCGCGTGGCCAGGGCTaGGTACCAGGCATTGTGCCG +
Preference number: 4 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPPRGQG*VPGIVP
Trigger: CGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGG...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGAGATCCTCCTTGGTCTaGACCACGATCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLRSSLV*TTISGS
Trigger: GCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCT...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CTTGCAGCCTGGCCGCGTGGCCAGGGCTGCGTACCAGGCATTGTGCCGTGCTGTTTGCCGTCACCCACATaGCCGACAATGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LAAWPRGQGCVPGIVPCCLPSPT*PTMLPV
Trigger: CACAGGAAGCATTGTCGGGCATGTGGGTGACGGCAA...ACAGCACGGCACAATGCCTGGTACGCAGCCCTGGCCACGCGGCCAGGCTGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGGGATGCAGTGGAAGTTaGCGTCACCCACATGCCCGA +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLGCSGS*RHPHAR
Trigger: TCGGGCATGTGGGTGACGGCAACTTCCACTGCATCC...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGCCTGCCCAGCTGTTCTaGAAAAGCCTTGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: ECSCHQVKGEGSWDPGSGPAQLF*KSLDPA
Trigger: GGCAGGGTCAAGGCTTTTGCAGAACAGCTGGGCAGG...CCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCTCCGTGGAGAGCCAGTaGCCGCCTGCCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QWARWQEDCLSIYFLAGASVESQ*PPAQLF
Trigger: GAACAGCTGGGCAGGCGGGCACTGGCTCTCCACGGA...GGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TGGTCTGCACCACGATCTCCGGCAGCCGGGAGATGGGCACACACACATCCGTGGTCCTCCTGCAGCAGCTaGCGCTTGCCCATTCCGATG +
Preference number: 4 (lower is better)
Translates to: WSAPRSPAAGRWAHTHPWSSCSS*RLPIPM
Trigger: CATCGGAATGGGCAAGCGGCAGCTGCTGCAGGAGGA...CCACGGATGTGTGTGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CTCAATGCGGGCTACGGGCACTGCAGCCTGGAGGATGTGTACAGTGCTGTCCACAGCACGGCCTTGAGCTaGCGCATGGTCTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: LNAGYGHCSLEDVYSAVHSTALS*RMVSTP
Trigger: GGGCGTGGAGACCATGCGGCAGCTCAAGGCCGTGCT...GTGGACAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGCATTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CCTGAGGCATTCAGATCCTCCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGTGCTGGACTGTGCGCTaGAGCTGCTCCTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PEAFRSSLVCTTISGSRECWTVR*SCSSSA
Trigger: GGCACTGGAGGAGCAGCTGCAGCGCACAGTCCAGCA...CTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAATGCCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp GGCCGTGGCATGAAGAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGCGGCAGTGGACACGTaGGAGCCGCCCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: GRGMKKSSRTGSVVRELVAAVDT*EPPTTA
Trigger: GGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGC...CACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTCTTCATGCCACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCACCGCTGTCCCGCAGGTaGGCGTTGAGGGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPPLSRR*ALRALR
Trigger: CCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGG...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATCCGCTGTCCCGCAGGTaGGCGTTGAGGGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LAGRKTASASISLQGPWHPLSRR*ALRALR
Trigger: CCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGG...ATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGAGCACGTTGTCCCGCATaGTGCCGTAGCGGACCGCGT +
Preference number: 4 (lower is better)
Translates to: LGTTLGRLLNQRLLGPARARCPA*CRSGPR
Trigger: ACGCGGTCCGCTACGGCACCATGCGGGACAACGTGC...TCTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp ACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATGATGGGCACACCTTGGGCACACACACATCCGTaGAGTAGCCCTTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TPPSSPVPVPNGMMGTPWAHTHP*SSPCSL
Trigger: CAGGCTGCAAGGGCTACTCCACGGATGTGTGTGTGC...CCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp GCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTACCGGCAGCCGGGAGATaGGCACACACACATCCGTGG +
Preference number: 4 (lower is better)
Translates to: ALGPDTVGSLAGRLPQHLPAAGR*AHTHPW
Trigger: CCACGGATGTGTGTGTGCCCATCTCCCGGCTGCCGG...TAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp TCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGGTGCAGGCATCCATCATaGCTTCATCCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: SPGEGGRVLGPRQWEASGCRHPS*LHPGTQ
Trigger: TTGAGTTCCTGGATGAAGTCATGATGGATGCCTGCA...CCCCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGGAGGTTCGCACCTGTaGACCGACTCATCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPGGSHL*TDSSRP
Trigger: CGGGCGCGATGAGTCGGTGCACAGGTGCGAACCTCC...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TTCAGCTCCAGGATTCGGTCCATATGCGTCAGGTTAACGCAGACGCCGCCCTGCGGAGGTTCGCACCTGTaGACCGACTCATCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: FSSRIRSICVRLTQTPPCGGSHL*TDSSRP
Trigger: CGGGCGCGATGAGTCGGTGCACAGGTGCGAACCTCC...GCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGACCGAATCCTGGAGCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp GCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTACCAGGCATTGTGCCGTaGTGTCCAAAGCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ALGPDTVGSLAGRLPQHLPGIVP*CPKPAA
Trigger: CGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGG...TAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCCCTGCCCAGCTGTTCTaGAAAAGCCTTGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: GKECSCHQVKGEGSWDPGPAQLF*KSLDPA
Trigger: GGCAGGGTCAAGGCTTTTGCAGAACAGCTGGGCAGG...GCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGAGCCAGTGCCCGCCTaGCCAGCTGTTCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: PGKECSCHQVKGEGSWDPEPVPA*PAVLQK
Trigger: CTTTTGCAGAACAGCTGGGCAGGCGGGCACTGGCTC...GGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGAGGAAGCAGCTTTGCCCCATTCCGATGCCATaGTCCCCCGTGCACGTTCCG +
Preference number: 4 (lower is better)
Translates to: RSLPARTGCVGAERKQLCPIPMP*SPVHVP
Trigger: CGGAACGTGCACGGGGGAGCATGGCATCGGAATGGG...GCAAAGCTGCTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAAGCAGCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGCGCCCACCTCCTCCTaGAGCAGCTGCCGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GSSFAGNHPGSFTEPKAPAPTSS*SSCRLP
Trigger: GGGCAAGCGGCAGCTGCTGCAGGAGGAGGTGGGCGC...AGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TTCTCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAGAGAGGAAGCAGCTTTaGTGGGAACCACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FSLGPLALGPDTVGSLAGERKQL*WEPPWV
Trigger: GACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCTCTC...TCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTCCCGCCAGGACAGGATaGGTAGGAGCAGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GLGPRYSGLAGRKTASASPARTG*VGAERK
Trigger: CTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGG...AGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CCTGAGGCATTCAGATCCTCCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGCGTTCTGCTGGACTGTaGGCTGCAGCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PEAFRSSLVCTTISGSRERSAGL*AAAAPP
Trigger: TGGAGGAGCAGCTGCAGCGCACAGTCCAGCAGAACG...CTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAATGCCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCCTCCAGTGCCTGCTaGGAGCCATGGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGLGPRYSGLAGRKTASASSSAC*EPWNSR
Trigger: CCTGGAGTTCCATGGCTCCCAGCAGGCACTGGAGGA...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGAGGATTCATGAGGCCTTaGGGGTCTAGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLGPLALGPDTVGSLAGRGFMRP*GSSTAL
Trigger: CAAGGCCGTGCTAGACCCCCAAGGCCTCATGAATCC...TCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GCAGTGGGAGGCCTCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGTGGGCCCAGATACAGTaGGCTCGCTGGCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: AVGGLGEGCHQSLEWTQTWAQIQ*ARWQED
Trigger: GTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCA...CGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGAGGCCTCCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CAA 72 bp CAGTGGGAGGCCTCGGGGAGGGGTGTCATCAGAGTCTaGAATGGACCCAGACGCTCTCTTCCCGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: QWEASGRGVIRV*NGPRRSLPART
Trigger: TGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGAGGCCTCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp TTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGACCCCCGCACCACCTCCAGGTTaGGCACGTTGTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: FQNRLRSQGTCGLSAQTPAPPPG*ARCPAW
Trigger: CCATGCGGGACAACGTGCTCAACCTGGAGGTGGTGC...GGGGGTCTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp CTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGGTCTAGCACGGCCTTaGGCTGCCGCATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LAGRKTASASISLQGPWHGLARP*AAAWSP
Trigger: TGGAGACCATGCGGCAGCTCAAGGCCGTGCTAGACC...ATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp ACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATGATGGGCACACCTTGGGTGTCATCAGAGTCTTaGATGGACCCAGACGCTCTC +
Preference number: 4 (lower is better)
Translates to: TPPSSPVPVPNGMMGTPWVSSES*MDPDAL
Trigger: GAGAGCGTCTGGGTCCATTCAAGACTCTGATGACAC...CCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCCCTCTACGAAGTCCCTaGAGAGCTCTCCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GKECSCHQVKGEGSWDPGPLRSP*RALPLP
Trigger: AGGCAAAGGGAGAGCTCTGCAGGGACTTCGTAGAGG...GCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp GGAAGCAGCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGCCAGCCGGCTGACCTaGTCCACGTTCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GSSFAGNHPGSFTEPKAPASRLT*STFWGH
Trigger: GTGGCCCCAGAACGTGGAGCAGGTCAGCCGGCTGGC...AGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGCCAGCCGGCTGACCTaGTCCACGTTCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQASRLT*STFWGH
Trigger: GTGGCCCCAGAACGTGGAGCAGGTCAGCCGGCTGGC...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGCTCTCGGACCACCGCGGCAGTGGACACGTGGGAGCCGCCCACCACGGCCTTCTAAGCAATTCAGCTTaGTGTACCTGTTGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLSDHRGSGHVGAAHHGLLSNSA*CTCCRH
Trigger: ATGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAG...AAGGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCCGAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGATGCTCCTCCAGTGCCTaGTGGGAGCCATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: LGTTLGRLLNQRLLGPARCSSSA*WEPWNS
Trigger: GGAGTTCCATGGCTCCCAGCAGGCACTGGAGGAGCA...TCTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTGGACTATCTCCTCTGTaGGCTGCAGCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLGPRYSGLAGRKTASASGLSPL*AAAAPP
Trigger: TGGAGGAGCAGCTGCAGCGCACAGAGGAGATAGTCC...AGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp GGAAGCAGCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTCCGTGGAGTAGCCCTTaGAGCCTGGCCGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSSFAGNHPGSFTEPKAPPWSSP*SLAAWP
Trigger: TGGCCACGCGGCCAGGCTGCAAGGGCTACTCCACGG...AGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGACCCCCGCTTGCCCATTCCGATaGCATGCTCCCCCGTGCACG +
Preference number: 4 (lower is better)
Translates to: FQNRLRSQGTCGLSAQTPACPFR*HAPPCT
Trigger: CGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGC...GGGGGTCTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATCCTCCTGCAGCAGCTaGCGCTTGCCCATTCCGATG +
Preference number: 4 (lower is better)
Translates to: ALGPDTVGSLAGRLPQHLSSCSS*RLPIPM
Trigger: CATCGGAATGGGCAAGCGGCAGCTGCTGCAGGAGGA...TAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGGCGCCCACCTCCTCCTaGAGCAGCTGCCGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EKFQNRLRSQGTCGLSAQAPTSS*SSCRLP
Trigger: GGGCAAGCGGCAGCTGCTGCAGGAGGAGGTGGGCGC...CTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCAAGGGAGGTAACACGGTaGTCAGGCTTCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGLGPRYSGLAGRKTASAREVTR*SGFSLG
Trigger: GCCCAGAGAGAAGCCTGAGCACCGTGTTACCTCCCT...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TTCAGATCCTCCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGATGGGCACACCCGCCAGGACAGGATaGGTAGGAGCAGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FRSSLVCTTISGSREMGTPARTG*VGAERK
Trigger: CTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGG...TGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp GGCGCCACTAAGCAATTCAGCTTGCTGTACCTGTTGCAGGCATCCATCATGACTGCGGCAGTGGACACGTaGGAGCCGCCCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: GATKQFSLLYLLQASIMTAAVDT*EPPTTA
Trigger: GGCCGTGGTGGGCGGCTCCCACGTGTCCACTGCCGC...AGTCATGATGGATGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAGTGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp GAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGGTGATGAGGGATTTCTaGCCAGAAGCCGAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: ECSCHQVKGEGSWDPGSGVMRDF*PEAEAE
Trigger: TTCCGCTTCGGCTTCTGGCCAGAAATCCCTCATCAC...CCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000569876.2
CDS-3UTR CCA 90 bp CTTCTCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGCATTCAGATCCTCCTTaGTCTGCACCACGATCTCCG +
Preference number: 4 (lower is better)
Translates to: LLSGPSGLGPRYSGLAGRHSDPP*SAPRSP
Trigger: CGGAGATCGTGGTGCAGACCAAGGAGGATCTGAATG...CCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CGTGCTGTCCAAAGCCGGCTGCGCTCCTCGGCCTCCTTGGCCCAGGAGAAGTCATCCTTGCAGGGGCCGTaGCATGAAGAAAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RAVQSRLRSSASLAQEKSSLQGP*HEEKFQ
Trigger: CTGGAACTTTTCTTCATGCCACGGCCCCTGCAAGGA...TGACTTCTCCTGGGCCAAGGAGGCCGAGGAGCGCAGCCGGCTTTGGACAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR TCA 90 bp AGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTGGGCTGCCAGCCGGCTaGCCTGCTCCACGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RFIGGGPKEKTYHHVTGAGLPAG*PAPRSG
Trigger: CCCAGAACGTGGAGCAGGTCAGCCGGCTGGCAGCCC...AGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR TCA 90 bp CAGCAGCTGCCGCTTGCCCATTCCGATGCCATGCTCCCCCGTGCACGTTCCGTGCGACAATGCTTCCTGTaGGTCCTGAGGCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: QQLPLAHSDAMLPRARSVRQCFL*VLRHSD
Trigger: ATCTGAATGCCTCAGGACTCACAGGAAGCATTGTCG...CACGGAACGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR TCA 90 bp GGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTCTTTGCCTGGATTCATaGGGCCTTGGGGGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GLGPRYSGLAGRKTASASLCLDS*GLGGLA
Trigger: TGCTAGACCCCCAAGGCCTCATGAATCCAGGCAAAG...AGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGTCATCGCGCCCGTGCTaGTCTCGGACCACCGCGGCA +
Preference number: 4 (lower is better)
Translates to: EKFQNRLRSQGTCGLSAQSSRPC*SRTTAA
Trigger: TGCCGCGGTGGTCCGAGAGCAGCACGGGCGCGATGA...CTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGGACTCATCGCGCCCGTaGTGCTCTCGGACCACCGCG +
Preference number: 4 (lower is better)
Translates to: EKFQNRLRSQGTCGLSAQDSSRP*CSRTTA
Trigger: CGCGGTGGTCCGAGAGCAGCACGGGCGCGATGAGTC...CTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGAGGATTCGGTCCATATaGGTCAGGTTAACGCAGACG +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLRIRSI*VRLTQT
Trigger: CGTCTGCGTTAACCTGACGCATATGGACCGAATCCT...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp AGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAAAGCCGAAGCGGAAATaGCGGCCTCGGCCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: SSRSIPGKECSCHQVKGEKPKRK*RPRPAV
Trigger: CACGGCGGGCCGAGGCCGGCATTTCCGCTTCGGCTT...TTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000569876.2
CDS-3UTR GCA 90 bp GCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTAAGATCCTCCTTGGTCTaGACCACGATCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALGPDTVGSLAGRLPQHLRSSLV*TTISGS
Trigger: GCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCT...TAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGTTGCCGTCACCCACATaGCCGACAATGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: AGNHPGSFTEPKAPGASQLPSPT*PTMLPV
Trigger: CACAGGAAGCATTGTCGGGCATGTGGGTGACGGCAA...CTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGAGGAAGCAGCTTTGCGGATGCAGTGGAAGTTaGCGTCACCCACATGCCCGA +
Preference number: 4 (lower is better)
Translates to: RSLPARTGCVGAERKQLCGCSGS*RHPHAR
Trigger: TCGGGCATGTGGGTGACGGCAACTTCCACTGCATCC...GCAAAGCTGCTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGTCCGTGGAGAGCCAGTaGCCGCCTGCCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: CHGSSRSIPGKECSCHQVSVESQ*PPAQLF
Trigger: GAACAGCTGGGCAGGCGGGCACTGGCTCTCCACGGA...CACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCATCCTCCTGCAGCAGCTaGCGCTTGCCCATTCCGATG +
Preference number: 4 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPSSCSS*RLPIPM
Trigger: CATCGGAATGGGCAAGCGGCAGCTGCTGCAGGAGGA...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGAAACTTGTGGGCTAAGTaGTCAGACCCCCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: SLGPLALGPDTVGSLAGRNLWAK*SDPLHS
Trigger: GCTGTGAAGGGGGTCTGAGCACTTAGCCCACAAGTT...TCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCGCTGGCAGGAAGACTaGCTCAGCATCTATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LGPLALGPDTVGSLAGRLRWQED*LSIYFL
Trigger: AAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCG...CAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGAGGAAGCAGCTTTGCACCTGCTCCACGTTCTaGGGCCACACCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: RSLPARTGCVGAERKQLCTCSTF*GHTTAS
Trigger: TGATGCTGTGGTGTGGCCCCAGAACGTGGAGCAGGT...GCAAAGCTGCTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCACCTGCTCCACGTTCTaGGGCCACACCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: LLGTTLGRLLNQRLLGPATCSTF*GHTTAS
Trigger: TGATGCTGTGGTGTGGCCCCAGAACGTGGAGCAGGT...GGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGGTGCCGGTGCCGAATaGGATGATGGGCACACCTTG +
Preference number: 4 (lower is better)
Translates to: LEWTQTLSSRQDRMRRSRGAGAE*DDGHTL
Trigger: CAAGGTGTGCCCATCATCCCATTCGGCACCGGCACC...TCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGAACAGAGAAGTCCTCCTaGTTCAGCTCCAGGATTCGG +
Preference number: 4 (lower is better)
Translates to: SLGPLALGPDTVGSLAGRTEKSS*FSSRIR
Trigger: CCGAATCCTGGAGCTGAACCAGGAGGACTTCTCTGT...TCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATTTGCGGGTGACACCTaGCTCCACCACCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: SGLGPRYSGLAGRKTASAFAGDT*LHHHRE
Trigger: TTCTCTGTGGTGGTGGAGCCAGGTGTCACCCGCAAA...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CATGAAGAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTCGTAGCGGACCGCGTTaGTCCCCGACGCCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: HEEKFQNRLRSQGTCGLSRSGPR*SPTPRW
Trigger: CCACCGGGGCGTCGGGGACCAACGCGGTCCGCTACG...ACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTCTTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGCACGTTGTCCCGCATaGTGCCGTAGCGGACCGCGT +
Preference number: 4 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQARCPA*CRSGPR
Trigger: ACGCGGTCCGCTACGGCACCATGCGGGACAACGTGC...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGCAGCAGCCTGGACACTaGGGAACGCACACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQQQPGH*GTHTWR
Trigger: CCGCCACGTGTGCGTTCCCCAGTGTCCAGGCTGCTG...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGCTCTCTTCCCGCCGAGGCTCCGTTCTGCTaGACTATCTCCTCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: SGRGVIRVLNGPRRSLPAEAPFC*TISSVR
Trigger: GCGCACAGAGGAGATAGTCCAGCAGAACGGAGCCTC...GGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CCA 90 bp GGAAGCAGCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTCCGGCAGCCGGGAGATaGGCACACACACATCCGTGG +
Preference number: 4 (lower is better)
Translates to: GSSFAGNHPGSFTEPKAPPAAGR*AHTHPW
Trigger: CCACGGATGTGTGTGTGCCCATCTCCCGGCTGCCGG...AGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp CGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGAGGAAGCAGCTTTGCATACAGTGGGCTCGCTaGCAGGAAGACTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RSLPARTGCVGAERKQLCIQWAR*QEDCLS
Trigger: GCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTAT...GCAAAGCTGCTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp AGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAAAGGGGGAAGGGTCCTaGGACCCCGGCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSRSIPGKECSCHQVKGEKGEGS*DPGSGR
Trigger: CCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTT...TTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGGTCTAGCACGGCCTTaGGCTGCCGCATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQGLARP*AAAWSP
Trigger: TGGAGACCATGCGGCAGCTCAAGGCCGTGCTAGACC...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp GCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTACTTTGCCTGGATTCATaGGGCCTTGGGGGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: ALGPDTVGSLAGRLPQHLLCLDS*GLGGLA
Trigger: TGCTAGACCCCCAAGGCCTCATGAATCCAGGCAAAG...TAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp CTCAATGCGGGCTACGGGCACTGCAGCCTGGAGGATGTGTACAGTGCTGTCCACCTTTGCCTGGATTCATaGGGCCTTGGGGGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LNAGYGHCSLEDVYSAVHLCLDS*GLGGLA
Trigger: TGCTAGACCCCCAAGGCCTCATGAATCCAGGCAAAG...GTGGACAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGCATTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp AGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCCCCGGTGGCCGCCATaGCACAGAGAGAGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: RPIIMSRELTFHTRKGVFPRWPP*HRERRP
Trigger: CGGACGCCTCTCTCTGTGGCATGGCGGCCACCGGGG...GAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAGCGGGCTACGGGCACTaGAGCCTGGAGGATGTGTAC +
Preference number: 4 (lower is better)
Translates to: GRKTASASISLQGPWHEEAGYGH*SLEDVY
Trigger: GTACACATCCTCCAGGCTGCAGTGCCCGTAGCCCGC...TTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGAGGAAGCAGCTTTGCTTGCCGTCACCCACATaGCCGACAATGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RSLPARTGCVGAERKQLCLPSPT*PTMLPV
Trigger: CACAGGAAGCATTGTCGGGCATGTGGGTGACGGCAA...GCAAAGCTGCTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGCAGCAGCTGCCGCTTaGCCATTCCGATGCCATGCT +
Preference number: 4 (lower is better)
Translates to: GSSRSIPGKECSCHQVKGAAAAA*PFRCHA
Trigger: AGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGC...CCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCAGTGGGAGGCCTCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGAACTTGTGGGCTAAGTaGTCAGACCCCCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: AVGGLGEGCHQSLEWTQTNLWAK*SDPLHS
Trigger: GCTGTGAAGGGGGTCTGAGCACTTAGCCCACAAGTT...CGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGAGGCCTCCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCACAGCATCTATTTCCTTaGAGGGGCCGTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: SGLGPRYSGLAGRKTASAQHLFP*RGRGMK
Trigger: CTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTG...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACGCTGGCAGGAAGACTaGCTCAGCATCTATTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLGPLALGPDTVGSLAGRRWQED*LSIYFL
Trigger: AAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCG...TCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GATTCGGTCCATATGCGTCAGGTTAACGCAGACGCCGCCCTGCACAGCACAGACGAGAGGAAGCAGCTTTaGTGGGAACCACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: DSVHMRQVNADAALHSTDERKQL*WEPPWV
Trigger: GACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCTCTC...GTCTGTGCTGTGCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGACCGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp AGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCGGACCACCGCGGCAGTaGACACGTGGGAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RPIIMSRELTFHTRKGVFGPPRQ*TRGSRP
Trigger: TGGGCGGCTCCCACGTGTCCACTGCCGCGGTGGTCC...GAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp AAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGTTCTCCCCGACGCCCCGGTaGCCGCCATGCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: KTASASISLQGPWHEEKFSPTPR*PPCHRE
Trigger: CTCTCTGTGGCATGGCGGCCACCGGGGCGTCGGGGA...GAACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCCCGACGCCCCGGTaGCCGCCATGCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECSPTPR*PPCHRE
Trigger: CTCTCTGTGGCATGGCGGCCACCGGGGCGTCGGGGA...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTTCCCCGACGCCCCGGTaGCCGCCATGCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: EKTYHHVTGAHVPYQERSSPTPR*PPCHRE
Trigger: CTCTCTGTGGCATGGCGGCCACCGGGGCGTCGGGGA...ACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp AGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAATGGGGAACGCACACGTaGCGGCCACTGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSRSIPGKECSCHQVKGEWGTHT*RPLWPQ
Trigger: CTGAGGCCACAGTGGCCGCCACGTGTGCGTTCCCCA...TTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCACTCCAGGAAGAGTGTaGGCGCCACTAAGCAATTCA +
Preference number: 4 (lower is better)
Translates to: GKECSCHQVKGEGSWDPGTPGRV*APLSNS
Trigger: TGAATTGCTTAGTGGCGCCCACACTCTTCCTGGAGT...GCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTAGCCCTTGCAGCCTaGCCGCGTGGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EKTYHHVTGAHVPYQERSVALAA*PRGQGC
Trigger: GCAGCCCTGGCCACGCGGCCAGGCTGCAAGGGCTAC...ACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp AGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCGTAGCCCTTGCAGCCTaGCCGCGTGGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RPIIMSRELTFHTRKGVFVALAA*PRGQGC
Trigger: GCAGCCCTGGCCACGCGGCCAGGCTGCAAGGGCTAC...GAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCACACACACATCCGTaGAGTAGCCCTTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPAHTHP*SSPCSL
Trigger: CAGGCTGCAAGGGCTACTCCACGGATGTGTGTGTGC...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGCTCTCTTCCCGCCACCAGCAGGATGCAGTaGAAGTTGCCGTCACCCACA +
Preference number: 4 (lower is better)
Translates to: SGRGVIRVLNGPRRSLPATSRMQ*KLPSPT
Trigger: TGTGGGTGACGGCAACTTCCACTGCATCCTGCTGGT...GGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGACCCCCGGATTCATGAGGCCTTaGGGGTCTAGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: FQNRLRSQGTCGLSAQTPGFMRP*GSSTAL
Trigger: CAAGGCCGTGCTAGACCCCCAAGGCCTCATGAATCC...GGGGGTCTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCCTTGCAGGGGCCGTaGCATGAAGAAAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SGLGPRYSGLAGRKTASASLQGP*HEEKFQ
Trigger: CTGGAACTTTTCTTCATGCCACGGCCCCTGCAAGGA...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACTGGGCCCTCTGGCCTTaGGCCCAGATACAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYWALWP*AQIQWA
Trigger: AGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCA...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTTGGGCCCTCTGGCCTTaGGCCCAGATACAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: AQIQWARWQEDCLSIYFLWALWP*AQIQWA
Trigger: AGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCA...AAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGAAGCAGCTTTGCTaGGAACCACCCTGGGTCGTT +
Preference number: 4 (lower is better)
Translates to: SGRGVIRVLNGPRRSLPARKQLC*EPPWVV
Trigger: AACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCT...GGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGCGGTGCCGAATGGGATaGTGGGCACACCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQRCRMG*WAHLGD
Trigger: ATCGCCAAGGTGTGCCCATCATCCCATTCGGCACCG...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp TTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCGGTGCCGAATGGGATaGTGGGCACACCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: LGPDTVGSLAGRLPQHLFRCRMG*WAHLGD
Trigger: ATCGCCAAGGTGTGCCCATCATCCCATTCGGCACCG...AAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp CTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATCAGGGACACACAAGGTaGGTACCAGGCTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: LAGRKTASASISLQGPWHQGHTR*VPGCVM
Trigger: CATCACACAGCCTGGTACTCACCTTGTGTGTCCCTG...ATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000569876.2
CDS-3UTR TCA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGCGGCGTCATCAGGGTTaGCCAGCAGGATGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQRRHQG*PAGCSG
Trigger: TCCACTGCATCCTGCTGGTCAACCCTGATGACGCCG...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp GGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAACGGCGTCATCAGGGTTaGCCAGCAGGATGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GRKTASASISLQGPWHEERRHQG*PAGCSG
Trigger: TCCACTGCATCCTGCTGGTCAACCCTGATGACGCCG...TTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp CTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGAGTGTCATCAGAGTCTTaGATGGACCCAGACGCTCTC +
Preference number: 4 (lower is better)
Translates to: LGTTLGRLLNQRLLGPARVSSES*MDPDAL
Trigger: GAGAGCGTCTGGGTCCATTCAAGACTCTGATGACAC...TCTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp TTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCGTGTCATCAGAGTCTTaGATGGACCCAGACGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLGTTLGRLLNQRLLGPAVSSES*MDPDAL
Trigger: GAGAGCGTCTGGGTCCATTCAAGACTCTGATGACAC...GGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCACCTCTACGAAGTCCCTaGAGAGCTCTCCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPPLRSP*RALPLP
Trigger: AGGCAAAGGGAGAGCTCTGCAGGGACTTCGTAGAGG...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp TTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTTGCTCCTCCAGTGCCTaGTGGGAGCCATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: LGPDTVGSLAGRLPQHLFCSSSA*WEPWNS
Trigger: GGAGTTCCATGGCTCCCAGCAGGCACTGGAGGAGCA...AAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTTGCTCCTCCAGTGCCTaGTGGGAGCCATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: AQIQWARWQEDCLSIYFLCSSSA*WEPWNS
Trigger: GGAGTTCCATGGCTCCCAGCAGGCACTGGAGGAGCA...AAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp AGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAACCAGGCATTGTGCCGTaGTGTCCAAAGCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SSRSIPGKECSCHQVKGEPGIVP*CPKPAA
Trigger: CGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGG...TTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCGTACCAGGCATTGTaGCGTGCTGTCCAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: AQIQWARWQEDCLSIYFLAYQAL*RAVQSR
Trigger: CCGGCTTTGGACAGCACGGCACAATGCCTGGTACGC...AAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGGTGCCGGTGCCGAATaGGATGATGGGCACACCTTG +
Preference number: 4 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQGAGAE*DDGHTL
Trigger: CAAGGTGTGCCCATCATCCCATTCGGCACCGGCACC...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGACCCCCTTTGCGGGTGACACCTaGCTCCACCACCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: FQNRLRSQGTCGLSAQTPFAGDT*LHHHRE
Trigger: TTCTCTGTGGTGGTGGAGCCAGGTGTCACCCGCAAA...GGGGGTCTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp ATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACACGGGCACTGCAGCCTaGAGGATGTGTACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: IPGKECSCHQVKGEGSWDTGTAA*RMCTVL
Trigger: CAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGT...GTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAACCAGCAGGATGCAGTaGAAGTTGCCGTCACCCACA +
Preference number: 4 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPTSRMQ*KLPSPT
Trigger: TGTGGGTGACGGCAACTTCCACTGCATCCTGCTGGT...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCTCACAGCACTTTGCCTaGATTCATGAGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLGTTLGRLLNQRLLGPASQHFA*IHEALG
Trigger: CCCCAAGGCCTCATGAATCCAGGCAAAGTGCTGTGA...GGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCACATCAGAGTCTTGAATaGACCCAGACGCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGLGPRYSGLAGRKTASAHQSLE*TQTLSS
Trigger: GGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATG...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GCAGTGGGAGGCCTCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGCATCAGAGTCTTGAATaGACCCAGACGCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AVGGLGEGCHQSLEWTQTHQSLE*TQTLSS
Trigger: GGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATG...CGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGAGGCCTCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CAA 72 bp GCGTCATCAGGGTTGACCAGCAGGATGCAGTGGAAGTaGCCGTCACCCACATGCCCGACAATGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ASSGLTSRMQWK*PSPTCPTMLPV
Trigger: CACAGGAAGCATTGTCGGGCATGTGGGTGACGGCAACTTCCACTGCATCCTGCTGGTCAACCCTGATGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR TCA 90 bp GGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGCAGGGACACACAAGGTaGGTACCAGGCTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: GSSRSIPGKECSCHQVKGQGHTR*VPGCVM
Trigger: CATCACACAGCCTGGTACTCACCTTGTGTGTCCCTG...CCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000569876.2
CDS-3UTR GCA 90 bp GCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTAAGGATTCGGTCCATATaGGTCAGGTTAACGCAGACG +
Preference number: 4 (lower is better)
Translates to: ALGPDTVGSLAGRLPQHLRIRSI*VRLTQT
Trigger: CGTCTGCGTTAACCTGACGCATATGGACCGAATCCT...TAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TTCAGATCCTCCTTGGTCTGCACCACGATCTCCGGCAGCCGGGAGATGGGCACAAGGATTCGGTCCATATaGGTCAGGTTAACGCAGACG +
Preference number: 4 (lower is better)
Translates to: FRSSLVCTTISGSREMGTRIRSI*VRLTQT
Trigger: CGTCTGCGTTAACCTGACGCATATGGACCGAATCCT...TGTGCCCATCTCCCGGCTGCCGGAGATCGTGGTGCAGACCAAGGAGGATCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACGAGGTTGTAGCCGGCTaGACTCTTCCTACGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYEVVAG*TLPTSQ
Trigger: CTGGGACGTAGGAAGAGTGCAGCCGGCTACAACCTC...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000569876.2
CDS-3UTR GCA 90 bp AGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCCAAAGCCGGCTaGGCTCCTCGGCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RPIIMSRELTFHTRKGVFLSKAG*APRPPW
Trigger: CCAAGGAGGCCGAGGAGCGCAGCCGGCTTTGGACAG...GAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TGGGCTAAGTGCTCAGACCCCCTTCACAGCACTTTGCCTGGATTCATGAGGCCTCCTGCCCAGCTGTTCTaGAAAAGCCTTGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: WAKCSDPLHSTLPGFMRPPAQLF*KSLDPA
Trigger: GGCAGGGTCAAGGCTTTTGCAGAACAGCTGGGCAGG...AGGCCTCATGAATCCAGGCAAAGTGCTGTGAAGGGGGTCTGAGCACTTAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp GTCTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAAACTTGTGGGCTAAGTaGTCAGACCCCCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: VLNGPRRSLPARTGCVGANLWAK*SDPLHS
Trigger: GCTGTGAAGGGGGTCTGAGCACTTAGCCCACAAGTT...TGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACAGGGAGGTAACACGGTaGTCAGGCTTCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYREVTR*SGFSLG
Trigger: GCCCAGAGAGAAGCCTGAGCACCGTGTTACCTCCCT...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCTCTCCCGGTACCTTTaGCTTCTGGGAGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYLSRYL*LLGAVA
Trigger: GGCTACTGCTCCCAGAAGGCAAAGGTACCGGGAGAG...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp CAGAGTCTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGACAGAGAAGTCCTCCTaGTTCAGCTCCAGGATTCGG +
Preference number: 4 (lower is better)
Translates to: QSLEWTQTLSSRQDRMRRTEKSS*FSSRIR
Trigger: CCGAATCCTGGAGCTGAACCAGGAGGACTTCTCTGT...CCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACACGGGCACTGCAGCCTaGAGGATGTGTACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYTGTAA*RMCTVL
Trigger: CAGCACTGTACACATCCTCCAGGCTGCAGTGCCCGT...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGAAGCAGCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGAGGCTCCGTTCTGCTaGACTATCTCCTCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: GSSFAGNHPGSFTEPKAPEAPFC*TISSVR
Trigger: GCGCACAGAGGAGATAGTCCAGCAGAACGGAGCCTC...AGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CCA 90 bp TTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTGGATTCATGAGGCCTTaGGGGTCTAGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGPDTVGSLAGRLPQHLFGFMRP*GSSTAL
Trigger: CAAGGCCGTGCTAGACCCCCAAGGCCTCATGAATCC...AAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAATACAGTGGGCTCGCTaGCAGGAAGACTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GRKTASASISLQGPWHEEIQWAR*QEDCLS
Trigger: GCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTAT...TTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp AGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGCGGTGCCGAATGGGATaGTGGGCACACCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: RKTASASISLQGPWHEEKRCRMG*WAHLGD
Trigger: ATCGCCAAGGTGTGCCCATCATCCCATTCGGCACCG...CTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp GAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGCACCACCTCCAGGTTaGGCACGTTGTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: EKTYHHVTGAHVPYQERSAPPPG*ARCPAW
Trigger: CCATGCGGGACAACGTGCTCAACCTGGAGGTGGTGC...ACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp CTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGACGACAATGCTTCCTGTaGGTCCTGAGGCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: LEWTQTLSSRQDRMRRSRRQCFL*VLRHSD
Trigger: ATCTGAATGCCTCAGGACTCACAGGAAGCATTGTCG...TCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAACTCCAGGAAGAGTGTGGGCGCCACTAAGCAATTCAGCTTGCTGTACCTGTCATCCAGGAACTCAATaGGGGCTACGGGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GTPGRVWAPLSNSACCTCHPGTQ*GLRALQ
Trigger: CTGCAGTGCCCGTAGCCCGCATTGAGTTCCTGGATG...ACAGGTACAGCAAGCTGAATTGCTTAGTGGCGCCCACACTCTTCCTGGAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR GCA 90 bp CATGAAGAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTCCAGGCATTGTGCCGTaGTGTCCAAAGCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: HEEKFQNRLRSQGTCGLSPGIVP*CPKPAA
Trigger: CGCAGCCGGCTTTGGACAGCACGGCACAATGCCTGG...ACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTCTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp AGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGGCGTACCAGGCATTGTaGCGTGCTGTCCAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RKTASASISLQGPWHEEKAYQAL*RAVQSR
Trigger: CCGGCTTTGGACAGCACGGCACAATGCCTGGTACGC...CTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGTGCGTACCAGGCATTGTaGCGTGCTGTCCAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GRLPQHLFPCRGRGMKKSAYQAL*RAVQSR
Trigger: CCGGCTTTGGACAGCACGGCACAATGCCTGGTACGC...ACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTGCCATGCTCCCCCGTaGACGTTCCGTGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECCHAPP*TFRGEP
Trigger: TGGCTCTCCACGGAACGTGCACGGGGGAGCATGGCA...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp AGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCGCTTGCCCATTCCGATaGCATGCTCCCCCGTGCACG +
Preference number: 4 (lower is better)
Translates to: RPIIMSRELTFHTRKGVFACPFR*HAPPCT
Trigger: CGTGCACGGGGGAGCATGGCATCGGAATGGGCAAGC...GAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGTGCAGCAGCTGCCGCTTaGCCATTCCGATGCCATGCT +
Preference number: 4 (lower is better)
Translates to: GRLPQHLFPCRGRGMKKSAAAAA*PFRCHA
Trigger: AGCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGC...ACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp AGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAACCTGCTCCACGTTCTaGGGCCACACCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: SSRSIPGKECSCHQVKGETCSTF*GHTTAS
Trigger: TGATGCTGTGGTGTGGCCCCAGAACGTGGAGCAGGT...TTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp ATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACTCCTTGCAGGGGCCGTaGCATGAAGAAAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: IPGKECSCHQVKGEGSWDSLQGP*HEEKFQ
Trigger: CTGGAACTTTTCTTCATGCCACGGCCCCTGCAAGGA...GTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGTGGTGTGAGCACTGGGTaGCAGGGTGACCAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GRLPQHLFPCRGRGMKKSGVSTG*QGDQSA
Trigger: AGCTGACTGGTCACCCTGCCACCCAGTGCTCACACC...ACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450168.3
CDS-3UTR TCA 90 bp CTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGATGCAGGCATCCATCATaGCTTCATCCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: LEWTQTLSSRQDRMRRSRCRHPS*LHPGTQ
Trigger: TTGAGTTCCTGGATGAAGTCATGATGGATGCCTGCA...TCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp GGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAGCTTCCTGTGAGTCCTaGGGCATTCAGATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GRKTASASISLQGPWHEEASCES*GIQILL
Trigger: AAGGAGGATCTGAATGCCTCAGGACTCACAGGAAGC...TTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TATTACAGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGCGTTGTCCCGCATGGTaGCGTAGCGGACCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: YYRFIGGGPKEKTYHHVTRCPAW*RSGPRW
Trigger: CCAACGCGGTCCGCTACGGCACCATGCGGGACAACG...CGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp AGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGGAGGTTGTAGCCGGCTaGACTCTTCCTACGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RKTASASISLQGPWHEEKEVVAG*TLPTSQ
Trigger: CTGGGACGTAGGAAGAGTGCAGCCGGCTACAACCTC...CTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000569876.2
CDS-3UTR GCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACTCAGAGGCTCCGTTCTaGTGGACTATCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYSEAPF*WTISSV
Trigger: CACAGAGGAGATAGTCCAGCAGAACGGAGCCTCTGA...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp GGTTTCAGGTTTATTACAGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCAGCACGGCCTTGAGCTaGCGCATGGTCTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: GFRFITDLLGEAPRRRPISTALS*RMVSTP
Trigger: GGGCGTGGAGACCATGCGGCAGCTCAAGGCCGTGCT...GATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAAACCTGAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGCATCTATTTCCTTaGAGGGGCCGTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYQHLFP*RGRGMK
Trigger: CTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTG...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTCCCGCCAGGACAGGATaGGTAGGAGCAGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECPARTG*VGAERK
Trigger: CTTCCTCTCTGCTCCTACGCATCCTGTCCTGGCGGG...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTGTGATGAGGGATTTCTaGCCAGAAGCCGAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: LGPDTVGSLAGRLPQHLFVMRDF*PEAEAE
Trigger: TTCCGCTTCGGCTTCTGGCCAGAAATCCCTCATCAC...AAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000569876.2
CDS-3UTR CCA 90 bp AAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGTTCTCCTCCAGTGCCTGCTaGGAGCCATGGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: KTASASISLQGPWHEEKFSSSAC*EPWNSR
Trigger: CCTGGAGTTCCATGGCTCCCAGCAGGCACTGGAGGA...GAACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCATTCAGATCCTCCTTaGTCTGCACCACGATCTCCG +
Preference number: 4 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYHSDPP*SAPRSP
Trigger: CGGAGATCGTGGTGCAGACCAAGGAGGATCTGAATG...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGTCACAGCACTTTGCCTaGATTCATGAGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CHGSSRSIPGKECSCHQVSQHFA*IHEALG
Trigger: CCCCAAGGCCTCATGAATCCAGGCAAAGTGCTGTGA...CACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp TTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTTCACAGCACTTTGCCTaGATTCATGAGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LGPDTVGSLAGRLPQHLFSQHFA*IHEALG
Trigger: CCCCAAGGCCTCATGAATCCAGGCAAAGTGCTGTGA...AAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp AAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGTTCGCAGGGGCCGTGGCATaGAGAAAAGTTCCAGAACCG +
Preference number: 4 (lower is better)
Translates to: KTASASISLQGPWHEEKFAGAVA*RKVPEP
Trigger: CGGTTCTGGAACTTTTCTTCATGCCACGGCCCCTGC...GAACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTCATCCAGGAACTCAATaGGGGCTACGGGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: EKTYHHVTGAHVPYQERSHPGTQ*GLRALQ
Trigger: CTGCAGTGCCCGTAGCCCGCATTGAGTTCCTGGATG...ACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGGACTATCTCCTCTGTaGGCTGCAGCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EKTYHHVTGAHVPYQERSGLSPL*AAAAPP
Trigger: TGGAGGAGCAGCTGCAGCGCACAGAGGAGATAGTCC...ACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp GAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGTCAGAGGCTCCGTTCTaGTGGACTATCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EKFQNRLRSQGTCGLSAQSEAPF*WTISSV
Trigger: CACAGAGGAGATAGTCCAGCAGAACGGAGCCTCTGA...CTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp AGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCGAGAGGAAGCAGCTTTaGTGGGAACCACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RPIIMSRELTFHTRKGVFERKQL*WEPPWV
Trigger: GACCCAGGGTGGTTCCCAGCAAAGCTGCTTCCTCTC...GAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp AGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCCTCTACGAAGTCCCTaGAGAGCTCTCCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: RPIIMSRELTFHTRKGVFPLRSP*RALPHP
Trigger: GGGATGAGGGAGAGCTCTGCAGGGACTTCGTAGAGG...GAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CCA 90 bp AGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAACATTCAGATCCTCCTTaGTCTGCACCACGATCTCCG +
Preference number: 4 (lower is better)
Translates to: SSRSIPGKECSCHQVKGEHSDPP*SAPRSP
Trigger: CGGAGATCGTGGTGCAGACCAAGGAGGATCTGAATG...TTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTATTACAGATTTATTaGGGGAGGCCCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ALGPDTVGSLAGRLPQHLLLQIY*GRPQGE
Trigger: TTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAA...TAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CCA 90 bp AGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCTTTGCGGGTGACACCTaGCTCCACCACCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: RPIIMSRELTFHTRKGVFFAGDT*LHHHRE
Trigger: TTCTCTGTGGTGGTGGAGCCAGGTGTCACCCGCAAA...GAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGACTCCAGGAAGAGTGTaGGCGCCACTAAGCAATTCA +
Preference number: 4 (lower is better)
Translates to: EKFQNRLRSQGTCGLSAQTPGRV*APLSNS
Trigger: TGAATTGCTTAGTGGCGCCCACACTCTTCCTGGAGT...CTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTACCAGCAGGATGCAGTaGAAGTTGCCGTCACCCACA +
Preference number: 4 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECTSRMQ*KLPSPT
Trigger: TGTGGGTGACGGCAACTTCCACTGCATCCTGCTGGT...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCATTATTACAGATTTATTaGGGGAGGCCCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPLLQIY*GRPQGE
Trigger: TTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAA...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR TCA 90 bp GAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGCTTCCTGTGAGTCCTaGGGCATTCAGATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EKTYHHVTGAHVPYQERSASCES*GIQILL
Trigger: AAGGAGGATCTGAATGCCTCAGGACTCACAGGAAGC...ACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTGCTTCCTGTGAGTCCTaGGGCATTCAGATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECASCES*GIQILL
Trigger: AAGGAGGATCTGAATGCCTCAGGACTCACAGGAAGC...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGCTAAGCAATTCAGCTTaGTGTACCTGTTGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQLSNSA*CTCCRH
Trigger: ATGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAG...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp CATGAAGAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTCAGCATCTATTTCCTTaGAGGGGCCGTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: HEEKFQNRLRSQGTCGLSQHLFP*RGRGMK
Trigger: CTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTG...ACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTACAGAGAAGTCCTCCTaGTTCAGCTCCAGGATTCGG +
Preference number: 4 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECTEKSS*FSSRIR
Trigger: CCGAATCCTGGAGCTGAACCAGGAGGACTTCTCTGT...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
3UTR CAA 72 bp GTGGGCGCCACTAAGCAATTCAGCTTGCTGTACCTGTaGCAGGCATCCATCATGACTTCATCCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: VGATKQFSLLYL*QASIMTSSRNS
Trigger: TGAGTTCCTGGATGAAGTCATGATGGATGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAGTGGCGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR TCA 90 bp CATGAAGAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTCGACAATGCTTCCTGTaGGTCCTGAGGCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: HEEKFQNRLRSQGTCGLSRQCFL*VLRHSD
Trigger: ATCTGAATGCCTCAGGACTCACAGGAAGCATTGTCG...ACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TTCAGGTTTATTACAGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCGCAGAGCTCTCCCTTTaGCTTCTGGGAGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: FRFITDLLGEAPRRRPIIAELSL*LLGAVA
Trigger: GGCTACTGCTCCCAGAAGGCAAAGGGAGAGCTCTGC...GATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAAACCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR GCA 90 bp GAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGCTAAGTGCTCAGCTAAGCAATTCAGCTTaGTGTACCTGTTGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: EKFQNRLRSQGTCGLSAQLSNSA*CTCCRH
Trigger: ATGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAG...CTGAGCACTTAGCCCACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR TCA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTGCAGGCATCCATCATaGCTTCATCCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECCRHPS*LHPGTQ
Trigger: TTGAGTTCCTGGATGAAGTCATGATGGATGCCTGCA...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR GCA 90 bp TTCAGGTTTATTACAGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCCGCTGGCAGGAAGACTaGCTCAGCATCTATTTCCTT +
Preference number: 4 (lower is better)
Translates to: FRFITDLLGEAPRRRPIIRWQED*LSIYFL
Trigger: AAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCG...GATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAAACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS GCA 90 bp CCCGCAGAGGGCGCTCACCGGAAATGCCGGCCTCGGCCCGCCGTGTaGAGCAGCCGCCCGTCGGGCAGCACCACCTCCAGGTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: PAEGAHRKCRPRPAV*SSRPSGSTTSRLST
Trigger: CGTGCTCAACCTGGAGGTGGTGCTGCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGGTGAGCGCCCTCTGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS GCA 90 bp GCAGACCCAAGGTGCCGTGTGTGGCGGGGGAGGCAGCCACAGGTGTaGCAAGGTGTGCTGGGACCATCCTCGGGCCGGGCGAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: ADPRCRVWRGRQPQV*QGVLGPSSGRAREP
Trigger: GGGCTCCCTCGCCCGGCCCGAGGATGGTCCCAGCACACCTTGGCACACCTGTGGCTGCCTCCCCCGCCACACACGGCACCTTGGGTCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS GCA 90 bp GTGCTGGGACCATCCTCGGGCCGGGCGAGGGAGCCCCACTGTACCTaGACAGCACAGACGCCACCCTCAAGCCCGGTGCCGGTGCCGAAT +
Preference number: 5 (lower is better)
Translates to: VLGPSSGRAREPHCT*TAQTPPSSPVPVPN
Trigger: ATTCGGCACCGGCACCGGGCTTGAGGGTGGCGTCTGTGCTGTGCAGGTACAGTGGGGCTCCCTCGCCCGGCCCGAGGATGGTCCCAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS-3UTR CAA 90 bp TCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGGTCCCGCAGGTGGGCGTaGAGGGCTTTGCGGGTGACA +
Preference number: 5 (lower is better)
Translates to: SPGEGGRVLGPRQWEASGSRRWA*RALRVT
Trigger: TGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGA...CCCCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp CCGAAGCGGAAATGCCGGCCTCGGCCCGCCGTGTGCAGCAGCCGCCCGTCGGGCTCAGCATCTATTTCCTaGCAGGGGCCGTGGCATGAA +
Preference number: 5 (lower is better)
Translates to: PKRKCRPRPAVCSSRPSGSASIS*QGPWHE
Trigger: TTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGA...GCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGCTTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CAA 90 bp AGGCCGCTGTCCCGCAGGTGGGCGTTGAGGGCTTTGCGGGTGACACCTGGCTCCGATGATGGGCACACCTaGGCGATAGCACAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RPLSRRWALRALRVTPGSDDGHT*AIAQGC
Trigger: GCAGCCCTGTGCTATCGCCAAGGTGTGCCCATCATC...GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CAA 90 bp AGGCCGCTGTCCCGCAGGTGGGCGTTGAGGGCTTTGCGGGTGACACCTGGCTCCGCTGCGTACCAGGCATaGTGCCGTGCTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: RPLSRRWALRALRVTPGSAAYQA*CRAVQS
Trigger: GCTTTGGACAGCACGGCACAATGCCTGGTACGCAGC...GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGACAGCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CAA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGTGCAGAGCTCTCCCTTaGCCTTCTGGGAGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRCRALP*PSGSSS
Trigger: GCTACTGCTCCCAGAAGGCAAAGGGAGAGCTCTGCA...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CAA 90 bp TTCTCTCTGGGCCCTCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAGGGTCTAGCACGGCCTaGAGCTGCCGCATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: FSLGPLALGPDTVGSLAGGSSTA*SCRMVS
Trigger: GGAGACCATGCGGCAGCTCAAGGCCGTGCTAGACCC...TCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAGAGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GCAGTGGGAGGCCTCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGTCCCGCAGGTGGGCGTaGAGGGCTTTGCGGGTGACA +
Preference number: 5 (lower is better)
Translates to: AVGGLGEGCHQSLEWTQTSRRWA*RALRVT
Trigger: TGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGA...CGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGAGGCCTCCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp TGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGTGGGAGGCCTCGGGCATTCAGATCCTCCTaGGTCTGCACCACGATCTCC +
Preference number: 5 (lower is better)
Translates to: CHQVKGEGSWDPGSGRPRAFRSS*VCTTIS
Trigger: GGAGATCGTGGTGCAGACCAAGGAGGATCTGAATGC...CCGAGGCCTCCCACTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp AAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCAGGGGTCTAGCACGGCCTaGAGCTGCCGCATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: KGVFLSPGEGGRVLGPRQGSSTA*SCRMVS
Trigger: GGAGACCATGCGGCAGCTCAAGGCCGTGCTAGACCC...CTGCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTACGCTCCTCGGCCTCCTaGGCCCAGGAGAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: ALGPDTVGSLAGRLPQHLRSSAS*AQEKSE
Trigger: CTCTGACTTCTCCTGGGCCAAGGAGGCCGAGGAGCG...TAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCTCGGCGTCATCAGGGTaGACCAGCAGGATGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GKECSCHQVKGEGSWDPGSASSG*TSRMQW
Trigger: CCACTGCATCCTGCTGGTCAACCCTGATGACGCCGA...GCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp CCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCTGCAGCAGCTGCCGCTaGCCCATTCCGATGCCATGC +
Preference number: 5 (lower is better)
Translates to: PGKECSCHQVKGEGSWDPCSSCR*PIPMPC
Trigger: GCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGCA...GGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GTCTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCACTGGGCCCTCTGGCCTaGGGCCCAGATACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: VLNGPRRSLPARTGCVGALGPLA*GPDTVG
Trigger: GCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG...TGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp CAGAGTCTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGTCCCGCAGGTGGGCGTaGAGGGCTTTGCGGGTGACA +
Preference number: 5 (lower is better)
Translates to: QSLEWTQTLSSRQDRMRRSRRWA*RALRVT
Trigger: TGTCACCCGCAAAGCCCTCAACGCCCACCTGCGGGA...CCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GCAGTGGGAGGCCTCGGGGAGGGGTGTCATCAGAGTCTTGAATGGACCCAGACGTCGGCGTCATCAGGGTaGACCAGCAGGATGCAGTGG +
Preference number: 5 (lower is better)
Translates to: AVGGLGEGCHQSLEWTQTSASSG*TSRMQW
Trigger: CCACTGCATCCTGCTGGTCAACCCTGATGACGCCGA...CGTCTGGGTCCATTCAAGACTCTGATGACACCCCTCCCCGAGGCCTCCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp ATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCTGGGCCCTCTGGCCTaGGGCCCAGATACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: IPGKECSCHQVKGEGSWDLGPLA*GPDTVG
Trigger: GCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG...GTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp TTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCGATGATGGGCACACCTaGGCGATAGCACAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LLGTTLGRLLNQRLLGPADDGHT*AIAQGC
Trigger: GCAGCCCTGTGCTATCGCCAAGGTGTGCCCATCATC...GGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GCAGGCATCCATCATGACTTCATCCAGGAACTCAATGCGGGCTACGGGCACTGCTGGGCGTTGAGGGCTTaGCGGGTGACACCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: AGIHHDFIQELNAGYGHCWALRA*RVTPGS
Trigger: GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCA...GCAGTGCCCGTAGCCCGCATTGAGTTCCTGGATGAAGTCATGATGGATGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CAA 90 bp CAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGCTGCGTACCAGGCATaGTGCCGTGCTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: QWARWQEDCLSIYFLAGAAAYQA*CRAVQS
Trigger: GCTTTGGACAGCACGGCACAATGCCTGGTACGCAGC...GGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp CTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATTGCAGCAGCTGCCGCTaGCCCATTCCGATGCCATGC +
Preference number: 5 (lower is better)
Translates to: LAGRKTASASISLQGPWHCSSCR*PIPMPC
Trigger: GCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGCA...ATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp ACGCCACCCTCAAGCCCGGTGCCGGTGCCGAATGGGATGATGGGCACACCTTGGGGTGTCATCAGAGTCTaGAATGGACCCAGACGCTCT +
Preference number: 5 (lower is better)
Translates to: TPPSSPVPVPNGMMGTPWGVIRV*NGPRRS
Trigger: AGAGCGTCTGGGTCCATTCAAGACTCTGATGACACC...CCAAGGTGTGCCCATCATCCCATTCGGCACCGGCACCGGGCTTGAGGGTGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CAA 90 bp GCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGTCTCTCCCGGTACCTTaGCCTTCTGGGAGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: AGNHPGSFTEPKAPGASQSLPVP*PSGSSS
Trigger: GCTACTGCTCCCAGAAGGCAAAGGTACCGGGAGAGA...CTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS GCA 90 bp TCTCCCTCATCCCTCCAGAGGACTTCTCTTCTCTCCCGGTACCTTTaGCTTCTGGGAGCAGTAGCCCCTCCAGGGGAACAGCTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: SPSSLQRTSLLSRYL*LLGAVAPPGEQLPG
Trigger: ACCTGGGAGCTGTTCCCCTGGAGGGGCTACTGCTCCCAGAAGGCAAAGGTACCGGGAGAGAAGAGAAGTCCTCTGGAGGGATGAGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS CCA 90 bp TCCAGGATTCGGTCCATATGCGTCAGGTTAACGCAGACGCCGCCCTaGTTGGGGCAGGTGCTAAGACCACTGCAGACCTGGGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SRIRSICVRLTQTPP*LGQVLRPLQTWVSD
Trigger: GTCAGAGACCCAGGTCTGCAGTGGTCTTAGCACCTGCCCCAACCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGACCGAATCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS-3UTR CAA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACTGGGCGTTGAGGGCTTaGCGGGTGACACCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYWALRA*RVTPGS
Trigger: GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCA...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGTGGGCGTTGAGGGCTTaGCGGGTGACACCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQWALRA*RVTPGS
Trigger: GGAGCCAGGTGTCACCCGCAAAGCCCTCAACGCCCA...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp TGGGCTAAGTGCTCAGACCCCCTTCACAGCACTTTGCCTGGATTCATGAGGCCTCGCTCCTCGGCCTCCTaGGCCCAGGAGAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: WAKCSDPLHSTLPGFMRPRSSAS*AQEKSE
Trigger: CTCTGACTTCTCCTGGGCCAAGGAGGCCGAGGAGCG...AGGCCTCATGAATCCAGGCAAAGTGCTGTGAAGGGGGTCTGAGCACTTAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CAA 90 bp GCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCTGCGTACCAGGCATaGTGCCGTGCTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: ALLGTTLGRLLNQRLLGPAAYQA*CRAVQS
Trigger: GCTTTGGACAGCACGGCACAATGCCTGGTACGCAGC...TGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp CTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATAGGATGCAGTGGAAGTaGCCGTCACCCACATGCCCG +
Preference number: 5 (lower is better)
Translates to: LAGRKTASASISLQGPWHRMQWK*PSPTCP
Trigger: CGGGCATGTGGGTGACGGCAACTTCCACTGCATCCT...ATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCATCTTGTTCTGCAAAAGCCTaGACCCTGCCCAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: GLGPRYSGLAGRKTASASCSAKA*TLPSSS
Trigger: CGAGGAACTGGGCAGGGTCAAGGCTTTTGCAGAACA...AGATGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp TGTTCTGCAAAAGCCTTGACCCTGCCCAGTTCCTCGGCGTCATCAGGGTTGACCTGCAGCAGCTGCCGCTaGCCCATTCCGATGCCATGC +
Preference number: 5 (lower is better)
Translates to: CSAKALTLPSSSASSGLTCSSCR*PIPMPC
Trigger: GCATGGCATCGGAATGGGCAAGCGGCAGCTGCTGCA...GGTCAACCCTGATGACGCCGAGGAACTGGGCAGGGTCAAGGCTTTTGCAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CAA 90 bp GGCCGTGGCATGAAGAAAAGTTCCAGAACCGGCTCCGTAGTCAGGGAACTTGTGGGGTCTAGCACGGCCTaGAGCTGCCGCATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GRGMKKSSRTGSVVRELVGSSTA*SCRMVS
Trigger: GGAGACCATGCGGCAGCTCAAGGCCGTGCTAGACCC...CACAAGTTCCCTGACTACGGAGCCGGTTCTGGAACTTTTCTTCATGCCACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS GCA 90 bp ACCACAGAGAAGTCCTCCTGGTTCAGCTCCAGGATTCGGTCCATATaGGTCAGGTTAACGCAGACGCCGCCCTGGTTGGGGCAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: TTEKSSWFSSRIRSI*VRLTQTPPWLGQVL
Trigger: TAGCACCTGCCCCAACCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGACCGAATCCTGGAGCTGAACCAGGAGGACTTCTCTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS-3UTR CAA 90 bp GGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGAGCACCACCTCCAGGTaGAGCACGTTGTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: GSSRSIPGKECSCHQVKGSTTSR*STLSRM
Trigger: CATGCGGGACAACGTGCTCAACCTGGAGGTGGTGCT...CCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGAGGATGCAGTGGAAGTaGCCGTCACCCACATGCCCG +
Preference number: 5 (lower is better)
Translates to: GSSRSIPGKECSCHQVKGRMQWK*PSPTCP
Trigger: CGGGCATGTGGGTGACGGCAACTTCCACTGCATCCT...CCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp TTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCTGTTCTGCAAAAGCCTaGACCCTGCCCAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: LLGTTLGRLLNQRLLGPACSAKA*TLPSSS
Trigger: CGAGGAACTGGGCAGGGTCAAGGCTTTTGCAGAACA...GGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp AGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCTGGGCCCTCTGGCCTaGGGCCCAGATACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: RFIGGGPKEKTYHHVTGALGPLA*GPDTVG
Trigger: GCCCACTGTATCTGGGCCCAAGGCCAGAGGGCCCAG...AGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CAA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCAAGCTTGCTGTACCTGTaGCAGGCATCCATCATGACT +
Preference number: 5 (lower is better)
Translates to: SGLGPRYSGLAGRKTASASLLYL*QASIMT
Trigger: AGTCATGATGGATGCCTGCAACAGGTACAGCAAGCT...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACTCGGCGTCATCAGGGTaGACCAGCAGGATGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GGPKEKTYHHVTGAHVPYSASSG*TSRMQW
Trigger: CCACTGCATCCTGCTGGTCAACCCTGATGACGCCGA...GTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp CTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTGGGGCCAGCCAGATCAGCATCTATTTCCTaGCAGGGGCCGTGGCATGAA +
Preference number: 5 (lower is better)
Translates to: LGTTLGRLLNQRLLGPARSASIS*QGPWHE
Trigger: TTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGA...TCTGGCTGGCCCCAGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp TCTGGCCTTGGGCCCAGATACAGTGGGCTCGCTGGCAGGAAGACTGCCTCAGCAACTAAGCAATTCAGCTaGCTGTACCTGTTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SGLGPRYSGLAGRKTASATKQFS*LYLLQA
Trigger: TGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAGT...TGCTGAGGCAGTCTTCCTGCCAGCGAGCCCACTGTATCTGGGCCCAAGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTCGCTCCTCGGCCTCCTaGGCCCAGGAGAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: EKTYHHVTGAHVPYQERSRSSAS*AQEKSE
Trigger: CTCTGACTTCTCCTGGGCCAAGGAGGCCGAGGAGCG...ACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GCAGGCATCCATCATGACTTCATCCAGGAACTCAATGCGGGCTACGGGCACTGCGCATTCAGATCCTCCTaGGTCTGCACCACGATCTCC +
Preference number: 5 (lower is better)
Translates to: AGIHHDFIQELNAGYGHCAFRSS*VCTTIS
Trigger: GGAGATCGTGGTGCAGACCAAGGAGGATCTGAATGC...GCAGTGCCCGTAGCCCGCATTGAGTTCCTGGATGAAGTCATGATGGATGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS-3UTR CAA 90 bp CTTGAATGGACCCAGACGCTCTCTTCCCGCCAGGACAGGATGCGTAGGAGCAGAGGTGTCATCAGAGTCTaGAATGGACCCAGACGCTCT +
Preference number: 5 (lower is better)
Translates to: LEWTQTLSSRQDRMRRSRGVIRV*NGPRRS
Trigger: AGAGCGTCTGGGTCCATTCAAGACTCTGATGACACC...TCTGCTCCTACGCATCCTGTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAAGGGTCCTGGGACCCCGGCTTTATTACAGATTTATaGGGGGAGGCCCCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GKECSCHQVKGEGSWDPGFITDL*GEAPRR
Trigger: TCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAAA...GCCGGGGTCCCAGGACCCTTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CAA 90 bp AGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTAGCACCACCTCCAGGTaGAGCACGTTGTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: RFIGGGPKEKTYHHVTGASTTSR*STLSRM
Trigger: CATGCGGGACAACGTGCTCAACCTGGAGGTGGTGCT...AGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CAA 90 bp CTCGCTGGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATAGCTTGCTGTACCTGTaGCAGGCATCCATCATGACT +
Preference number: 5 (lower is better)
Translates to: LAGRKTASASISLQGPWHSLLYL*QASIMT
Trigger: AGTCATGATGGATGCCTGCAACAGGTACAGCAAGCT...ATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCCAGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGCCCCAAGGAGAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGCATTCAGATCCTCCTaGGTCTGCACCACGATCTCC +
Preference number: 5 (lower is better)
Translates to: GPKEKTYHHVTGAHVPYQAFRSS*VCTTIS
Trigger: GGAGATCGTGGTGCAGACCAAGGAGGATCTGAATGC...CTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTCTCCTTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp AGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGAGGATGCAGTGGAAGTaGCCGTCACCCACATGCCCG +
Preference number: 5 (lower is better)
Translates to: RKTASASISLQGPWHEEKRMQWK*PSPTCP
Trigger: CGGGCATGTGGGTGACGGCAACTTCCACTGCATCCT...CTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTGATGATGGGCACACCTaGGCGATAGCACAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECDDGHT*AIAQGC
Trigger: GCAGCCCTGTGCTATCGCCAAGGTGTGCCCATCATC...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp AGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAAGGGGGAATGTTCTGCAAAAGCCTaGACCCTGCCCAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: SSRSIPGKECSCHQVKGECSAKA*TLPSSS
Trigger: CGAGGAACTGGGCAGGGTCAAGGCTTTTGCAGAACA...TTCCCCCTTCACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGAAGCAGCTTTGCTGGGAACCACCCTGGGTCGTTTACTGAACCAAAGGCTCCTTCAGCATCTATTTCCTaGCAGGGGCCGTGGCATGAA +
Preference number: 5 (lower is better)
Translates to: GSSFAGNHPGSFTEPKAPSASIS*QGPWHE
Trigger: TTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGA...AGGAGCCTTTGGTTCAGTAAACGACCCAGGGTGGTTCCCAGCAAAGCTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GAAGACCTATCATCATGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTGCAGAGCTCTCCCTTaGCCTTCTGGGAGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: EDLSSCHGSSRSIPGKECCRALP*PSGSSS
Trigger: GCTACTGCTCCCAGAAGGCAAAGGGAGAGCTCTGCA...ACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACATGATGATAGGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CAA 90 bp TGTCACGGGAGCTCACGTTCCATACCAGGAAAGGAGTGTTCCTGTCACCAGGTGAGCTTGCTGTACCTGTaGCAGGCATCCATCATGACT +
Preference number: 5 (lower is better)
Translates to: CHGSSRSIPGKECSCHQVSLLYL*QASIMT
Trigger: AGTCATGATGGATGCCTGCAACAGGTACAGCAAGCT...CACCTGGTGACAGGAACACTCCTTTCCTGGTATGGAACGTGAGCTCCCGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGCAGGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAACTAAGCAATTCAGCTaGCTGTACCTGTTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GRKTASASISLQGPWHEETKQFS*LYLLQA
Trigger: TGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAGT...TTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp TTCAGGTTTATTACAGATTTATTGGGGGAGGCCCCAAGGAGAAGACCTATCATCAGCACCACCTCCAGGTaGAGCACGTTGTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: FRFITDLLGEAPRRRPIISTTSR*STLSRM
Trigger: CATGCGGGACAACGTGCTCAACCTGGAGGTGGTGCT...GATGATAGGTCTTCTCCTTGGGGCCTCCCCCAATAAATCTGTAATAAACCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS-3UTR CAA 90 bp AAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGTTCGGTGTCATCAGAGTCTaGAATGGACCCAGACGCTCT +
Preference number: 5 (lower is better)
Translates to: KTASASISLQGPWHEEKFGVIRV*NGPRRS
Trigger: AGAGCGTCTGGGTCCATTCAAGACTCTGATGACACC...GAACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS-3UTR CAA 90 bp GGAAGACTGCCTCAGCATCTATTTCCTTGCAGGGGCCGTGGCATGAAGAAAAGTACTAAGCAATTCAGCTaGCTGTACCTGTTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GRLPQHLFPCRGRGMKKSTKQFS*LYLLQA
Trigger: TGCCTGCAACAGGTACAGCAAGCTGAATTGCTTAGT...ACTTTTCTTCATGCCACGGCCCCTGCAAGGAAATAGATGCTGAGGCAGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS GCA 72 bp GGCGCTCACCGGAAATGCCGGCCTCGGCCCGCCGTGTaGAGCAGCCGCCCGTCGGGCAGCACCACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GAHRKCRPRPAV*SSRPSGSTTSR
Trigger: CCTGGAGGTGGTGCTGCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGGTGAGCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS GCA 72 bp GCACTCTTCCGGAAATGCCGGCCTCGGCCCGCCGTGTaGAGCAGCCGCCCGTCGGGCAGCACCACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ALFRKCRPRPAV*SSRPSGSTTSR
Trigger: CCTGGAGGTGGTGCTGCCCGACGGGCGGCTGCTGCACACGGCGGGCCGAGGCCGGCATTTCCGGAAGAGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450168.3
CDS GCA 72 bp CCATCCTCGGGCCGGGCGAGGGAGCCCCACTGTACCTaGACAGCACAGACGCCACCCTCAAGCCCGGTGCCG +
Preference number: 6 (lower is better)
Translates to: PSSGRAREPHCT*TAQTPPSSPVP
Trigger: CGGCACCGGGCTTGAGGGTGGCGTCTGTGCTGTGCAGGTACAGTGGGGCTCCCTCGCCCGGCCCGAGGATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS GCA 72 bp AGGTGCCGTGTGTGGCGGGGGAGGCAGCCACAGGTGTaGCAAGGTGTGCTGGGACCATCCTCGGGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: RCRVWRGRQPQV*QGVLGPSSGRA
Trigger: CGCCCGGCCCGAGGATGGTCCCAGCACACCTTGGCACACCTGTGGCTGCCTCCCCCGCCACACACGGCACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS TCA 72 bp GGCCCAGCGTCCCCTCGGAGCCCACGAAGAGCCCCGTaGGGTTGTAGCCGGCTGCACTCTTCCGGAAATGCC +
Preference number: 6 (lower is better)
Translates to: GPASPRSPRRAP*GCSRLHSSGNA
Trigger: GGCATTTCCGGAAGAGTGCAGCCGGCTACAACCTCACGGGGCTCTTCGTGGGCTCCGAGGGGACGCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450168.3
CDS CCA 72 bp CCCTGGTTGGGGCAGGTGCTAAGACCACTGCAGACCTaGGTCTCTGACCTGGCCACGTCCCCGGACCACACC +
Preference number: 6 (lower is better)
Translates to: PWLGQVLRPLQT*VSDLATSPDHT
Trigger: GGTGTGGTCCGGGGACGTGGCCAGGTCAGAGACCCAGGTCTGCAGTGGTCTTAGCACCTGCCCCAACCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS GCA 72 bp GGAGCAGTAGCCCCTCCAGGGGAACAGCTCCCAGGTTaGAGACCTGAGCAGTCGGGCCATAGCCAGGCACTG +
Preference number: 6 (lower is better)
Translates to: GAVAPPGEQLPG*RPEQSGHSQAL
Trigger: CAGTGCCTGGCTATGGCCCGACTGCTCAGGTCTGCAACCTGGGAGCTGTTCCCCTGGAGGGGCTACTGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300051.8
ENST00000450168.3
ENST00000569876.2
CDS CCA 72 bp GTTGCAGACCTGAGCAGTCGGGCCATAGCCAGGCACTaGCCAGAGGGTGTGAGCACTGGGTGGCAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: VADLSSRAIARH*PEGVSTGWQGD
Trigger: GTCACCCTGCCACCCAGTGCTCACACCCTCTGGCCAGTGCCTGGCTATGGCCCGACTGCTCAGGTCTGCAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS GCA 72 bp CGCCCACCACGGCCTTCAGAGCCTCTACGAAGTCCCTaGAGAGCTCTCCCTTTGCCTTCTGGGAGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: RPPRPSEPLRSP*RALPLPSGSSS
Trigger: GCTACTGCTCCCAGAAGGCAAAGGGAGAGCTCTGCAGGGACTTCGTAGAGGCTCTGAAGGCCGTGGTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300051.8
ENST00000450168.3
CDS GCA 72 bp CGCCCACCACGGCCTTCAGAGCCTCTACGAAGTCCCTaGAGAGCTCTCCCTCATCCCTCCAGAGGACTTCTC +
Preference number: 6 (lower is better)
Translates to: RPPRPSEPLRSP*RALPHPSRGLL
Trigger: GAGAAGTCCTCTGGAGGGATGAGGGAGAGCTCTGCAGGGACTTCGTAGAGGCTCTGAAGGCCGTGGTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS CCA 72 bp CGGTCCATATGCGTCAGGTTAACGCAGACGCCGCCCTaGTTGGGGCAGGTGCTAAGACCACTGCAGACCTGG +
Preference number: 6 (lower is better)
Translates to: RSICVRLTQTPP*LGQVLRPLQTW
Trigger: CCAGGTCTGCAGTGGTCTTAGCACCTGCCCCAACCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS CAA 72 bp TCCATATGCGTCAGGTTAACGCAGACGCCGCCCTGGTaGGGGCAGGTGCTAAGACCACTGCAGACCTGGGTC +
Preference number: 6 (lower is better)
Translates to: SICVRLTQTPPW*GQVLRPLQTWV
Trigger: GACCCAGGTCTGCAGTGGTCTTAGCACCTGCCCCAACCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS CAA 90 bp AGGATTCGGTCCATATGCGTCAGGTTAACGCAGACGCCGCCCTGGTaGGGGCAGGTGCTAAGACCACTGCAGACCTGGGTCTCTGACCTG +
Preference number: 6 (lower is better)
Translates to: RIRSICVRLTQTPPW*GQVLRPLQTWVSDL
Trigger: CAGGTCAGAGACCCAGGTCTGCAGTGGTCTTAGCACCTGCCCCAACCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGACCGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568164.1
CDS GCA 72 bp TCCCTCCAGAGGACTTCTCTTCTCTCCCGGTACCTTTaGCTTCTGGGAGCAGTAGCCCCTCCAGGGGAACAG +
Preference number: 6 (lower is better)
Translates to: SLQRTSLLSRYL*LLGAVAPPGEQ
Trigger: CTGTTCCCCTGGAGGGGCTACTGCTCCCAGAAGGCAAAGGTACCGGGAGAGAAGAGAAGTCCTCTGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569876.2
CDS GCA 72 bp AAGTCCTCCTGGTTCAGCTCCAGGATTCGGTCCATATaGGTCAGGTTAACGCAGACGCCGCCCTGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: KSSWFSSRIRSI*VRLTQTPPWLG
Trigger: CCCCAACCAGGGCGGCGTCTGCGTTAACCTGACGCATATGGACCGAATCCTGGAGCTGAACCAGGAGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568164.1