Pregenerated sensors for LDHC (Homo sapiens)
Ensembl gene IDs: ENSG00000166796Ensembl transcript IDs: ENST00000396215.7, ENST00000539369.1, ENST00000541669.6, ENST00000544105.5, ENST00000545848.5, ENST00000546146.5
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAGTTATCTACTGGTCTCAGTCTCCCAAGTAGCTGGACTACAGATGCAGGCCACGGGGTGTTGCTATGTTaGCAAGGCTGGTCTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: KLSTGLSLPSSWTTDAGHGVLLC*QGWSQT Trigger: AGTTTGAGACCAGCCTTGGCAACATAGCAACACCCC...GTGGCCTGCATCTGTAGTCCAGCTACTTGGGAGACTGAGACCAGTAGATAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| 3UTR-3UTR TCA 90 bp | AAGTTATCTACTGGTCTCAGTCTCCCAAGTAGCTGGACTACAGATGCAGGCCACAAAGGGCTTGGTTTGTaGAAAGAATCAAAGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: KLSTGLSLPSSWTTDAGHKGLGL*KESKLC Trigger: ACAGAGCTTTGATTCTTTTCACAAACCAAGCCCTTT...GTGGCCTGCATCTGTAGTCCAGCTACTTGGGAGACTGAGACCAGTAGATAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| 3UTR-3UTR CCA 90 bp | CCTAAGATTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCTGGCAGCTTGTGGGGTaGACACCCAACTTTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PKIFQNGSYQIHHRQSNSWQLVG*TPNFSP Trigger: TGGAGAAAAGTTGGGTGTCCACCCCACAAGCTGCCA...GCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAATCTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
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| 3UTR-3UTR CCA 90 bp | CTAAGATTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCTGGCAGCTTGTGGGGTaGACACCCAACTTTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LRFFKMDPTKSITDSPIAWQLVG*TPNFSP Trigger: TGGAGAAAAGTTGGGTGTCCACCCCACAAGCTGCCA...GGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAATCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
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| 3UTR-3UTR CCA 90 bp | CTAAGATTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCATAGCCACATTACGTTaGACCAGGGCAAGGCGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LRFFKMDPTKSITDSPIAIATLR*TRARRV Trigger: AACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTAT...GGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAATCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396215.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAGATTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCAACCATGGCAGCTTGTaGGGTGGACACCCAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LRFFKMDPTKSITDSPIANHGSL*GGHPTF Trigger: AAAAGTTGGGTGTCCACCCCACAAGCTGCCATGGTT...GGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAATCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
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| 3UTR-3UTR GCA 90 bp | ACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTTAAAATACACAGCCTaGTATCTTCTGTTCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: TTSETPFRPKTQGILRKSLKYTA*YLLFSK Trigger: TTTGGAGAACAGAAGATAGCAGGCTGTGTATTTTAA...ACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
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| 3UTR-3UTR GCA 90 bp | TTACCATTTGCTCGTTCTAATCTTGAGAGACTAGAGTTATGTCACAGGTCTCCATTAAAATACACAGCCTaGTATCTTCTGTTCTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LPFARSNLERLELCHRSPLKYTA*YLLFSK Trigger: TTTGGAGAACAGAAGATAGCAGGCTGTGTATTTTAA...TGGAGACCTGTGACATAACTCTAGTCTCTCAAGATTAGAACGAGCAAATGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| 3UTR-3UTR GCA 90 bp | CCTAAGATTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCTTAAAATACACAGCCTaGTATCTTCTGTTCTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PKIFQNGSYQIHHRQSNSLKYTA*YLLFSK Trigger: TTTGGAGAACAGAAGATAGCAGGCTGTGTATTTTAA...GCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAATCTTAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
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| 3UTR-3UTR CAA 90 bp | ACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCCAACCATGGCAGCTaGTGGGGTGGACACCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: TTSETPFRPKTQGILRKSSNHGS*WGGHPT Trigger: AGTTGGGTGTCCACCCCACAAGCTGCCATGGTTGGA...ACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
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| 3UTR CCA 72 bp | CCACTAGAATCACCATGTTCTCCAATAATCCAACCATaGCAGCTTGTGGGGTGGACACCCAACTTTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLESPCSPIIQP*QLVGWTPNFSP Trigger: TGGAGAAAAGTTGGGTGTCCACCCCACAAGCTGCCATGGTTGGATTATTGGAGAACATGGTGATTCTAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000545848.5 |
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| 3UTR-3UTR CAA 90 bp | ACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTTATTCCTATAGCCACATTACGTaGGACCAGGGCAAGGCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TIPPQDTRDTEKEFFFYSYSHIT*DQGKAS Trigger: ACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTATA...GGAATAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
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| 3UTR-3UTR CAA 90 bp | TTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCCAAGAGTATAGCCACATTACGTaGGACCAGGGCAAGGCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FFKMDPTKSITDSPIAQEYSHIT*DQGKAS Trigger: ACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTATA...CTCTTGGGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396215.7 |
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| 3UTR-3UTR CAA 90 bp | AAGTTATCTACTGGTCTCAGTCTCCCAAGTAGCTGGACTACAGATGCAGGCCACTTACACCTGTACAGATaGGGTATCATTAGAATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLSTGLSLPSSWTTDAGHLHLYR*GIIRIE Trigger: CTCTATTCTAATGATACCCAATCTGTACAGGTGTAA...GTGGCCTGCATCTGTAGTCCAGCTACTTGGGAGACTGAGACCAGTAGATAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| 3UTR TCA 72 bp | ACAATCAGGACTATAATGGACTATGGCAGGAATGATTaGTTTCATTATAGCCACATTACGTTGGACCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TIRTIMDYGRND*FHYSHITLDQG Trigger: GCCCTGGTCCAACGTAATGTGGCTATAATGAAATCAATCATTCCTGCCATAGTCCATTATAGTCCTGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
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| CDS-3UTR TCA 90 bp | AAGTTATCTACTGGTCTCAGTCTCCCAAGTAGCTGGACTACAGATGCAGGCCACTACACCAACGACAGTTaGGGCGCTAAGCCCGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLSTGLSLPSSWTTDAGHYTNDS*GAKPVD Trigger: GTCGACGGGCTTAGCGCCTCAACTGTCGTTGGTGTA...GTGGCCTGCATCTGTAGTCCAGCTACTTGGGAGACTGAGACCAGTAGATAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS-3UTR GCA 90 bp | AAGTTATCTACTGGTCTCAGTCTCCCAAGTAGCTGGACTACAGATGCAGGCCACTGGCCCAGGCTGGAGTaGAGTGACACAATCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSTGLSLPSSWTTDAGHWPRLE*SDTIIA Trigger: GGCTATGATTGTGTCACTGCACTCCAGCCTGGGCCA...GTGGCCTGCATCTGTAGTCCAGCTACTTGGGAGACTGAGACCAGTAGATAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS-3UTR GCA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTCCCTCCTGCTGCCTTaGACCTGCTGTGACAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SETPFRPKTQGILRKSSSSLLLP*TCCDNN Trigger: GTTATTGTCACAGCAGGTGCAAGGCAGCAGGAGGGA...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000544105.5 ENST00000545848.5 |
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| CDS-3UTR GCA 90 bp | GGCTCAAGTTATCTACTGGTCTCAGTCTCCCAAGTAGCTGGACTACAGATGCAGGGGGTGTTGCTATGTTaGCAAGGCTGGTCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GSSYLLVSVSQVAGLQMQGVLLC*QGWSQT Trigger: AGTTTGAGACCAGCCTTGGCAACATAGCAACACCCC...CTGCATCTGTAGTCCAGCTACTTGGGAGACTGAGACCAGTAGATAACTTGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS-3UTR CCA 90 bp | ACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTATAGCCACATTACGTTaGACCAGGGCAAGGCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTSETPFRPKTQGILRKSIATLR*TRARRV Trigger: AACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTAT...ACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000544105.5 ENST00000545848.5 |
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| CDS-3UTR CCA 90 bp | ACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTAACCATGGCAGCTTGTaGGGTGGACACCCAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TTSETPFRPKTQGILRKSNHGSL*GGHPTF Trigger: AAAAGTTGGGTGTCCACCCCACAAGCTGCCATGGTT...ACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
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| CDS-3UTR CCA 90 bp | ACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTAACCATGGCAGCTTGTaGGGTGGACACCCAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: TSETPFRPKTQGILRKSSNHGSL*GGHPTF Trigger: AAAAGTTGGGTGTCCACCCCACAAGCTGCCATGGTT...AGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
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| CDS-3UTR CCA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTCCAATAATCCAACCATaGCAGCTTGTGGGGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SETPFRPKTQGILRKSSSPIIQP*QLVGWT Trigger: TGTCCACCCCACAAGCTGCCATGGTTGGATTATTGG...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
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| CDS-3UTR TCA 90 bp | TTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCCAAGAGTACACCAACGACAGTTaGGGCGCTAAGCCCGTCGAC | + |
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Preference number: 4 (lower is better) Translates to: FFKMDPTKSITDSPIAQEYTNDS*GAKPVD Trigger: GTCGACGGGCTTAGCGCCTCAACTGTCGTTGGTGTA...CTCTTGGGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396215.7 |
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| CDS-3UTR CCA 90 bp | ATTTTCACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAATAGCCACATTACGTTaGACCAGGGCAAGGCGAGTT | + |
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Preference number: 4 (lower is better) Translates to: IFTTSETPFRPKTQGILRIATLR*TRARRV Trigger: AACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTAT...TCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000544105.5 ENST00000545848.5 |
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| CDS-3UTR CCA 90 bp | GCAGGAATGATTGATTTCATTATAGCCACATTACGTTGGACCAGGGCAAGGCGAAACCATGGCAGCTTGTaGGGTGGACACCCAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: AGMIDFIIATLRWTRARRNHGSL*GGHPTF Trigger: AAAAGTTGGGTGTCCACCCCACAAGCTGCCATGGTT...TCGCCTTGCCCTGGTCCAACGTAATGTGGCTATAATGAAATCAATCATTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
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| CDS-3UTR CCA 90 bp | ATTTTCACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAACCATGGCAGCTTGTaGGGTGGACACCCAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: IFTTSETPFRPKTQGILRNHGSL*GGHPTF Trigger: AAAAGTTGGGTGTCCACCCCACAAGCTGCCATGGTT...TCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
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| CDS-3UTR CCA 90 bp | ATTTTCACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGACCAATAATCCAACCATaGCAGCTTGTGGGGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: IFTTSETPFRPKTQGILRPIIQP*QLVGWT Trigger: TGTCCACCCCACAAGCTGCCATGGTTGGATTATTGG...TCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
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| CDS-3UTR CCA 90 bp | AAGTTATCTACTGGTCTCAGTCTCCCAAGTAGCTGGACTACAGATGCAGGCCACATAGCCTTGAACTCCTaGGCTCAAGTTATCTACTGG | + |
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Preference number: 4 (lower is better) Translates to: KLSTGLSLPSSWTTDAGHIALNS*AQVIYW Trigger: CCAGTAGATAACTTGAGCCCAGGAGTTCAAGGCTAT...GTGGCCTGCATCTGTAGTCCAGCTACTTGGGAGACTGAGACCAGTAGATAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS-3UTR TCA 90 bp | ACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTAATTTTCACAACATCTaGGACACCATTCCGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TSETPFRPKTQGILRKSSNFHNI*DTIPPQ Trigger: TTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAATT...AGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
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| CDS-3UTR TCA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTAATTTTCACAACATCTaGGACACCATTCCGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SETPFRPKTQGILRKSSSNFHNI*DTIPPQ Trigger: TTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAATT...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
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| CDS-3UTR GCA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTCTGCTGCCTTGCACCTaGTGTGACAATAACTATTCT | + |
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Preference number: 4 (lower is better) Translates to: SETPFRPKTQGILRKSSSLLPCT*CDNNYS Trigger: AGAATAGTTATTGTCACAGCAGGTGCAAGGCAGCAG...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000544105.5 ENST00000545848.5 |
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| CDS-3UTR GCA 90 bp | ATGATTGATTTCATTATAGCCACATTACGTTGGACCAGGGCAAGGCGAGTTTCTTCCCTCCTGCTGCCTTaGACCTGCTGTGACAATAAC | + |
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Preference number: 4 (lower is better) Translates to: MIDFIIATLRWTRARRVSSLLLP*TCCDNN Trigger: GTTATTGTCACAGCAGGTGCAAGGCAGCAGGAGGGA...AGAAACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTATAATGAAATCAATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
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| CDS-3UTR CCA 90 bp | ACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTTATTCCATAGCCACATTACGTTaGACCAGGGCAAGGCGAGTT | + |
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Preference number: 4 (lower is better) Translates to: TIPPQDTRDTEKEFFFYSIATLR*TRARRV Trigger: AACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTAT...GGAATAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
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| CDS-3UTR TCA 90 bp | ACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTCAATTAGCTGCTCCTTaGCAGTTGACATTTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TTSETPFRPKTQGILRKSQLAAP*QLTFGE Trigger: TTCTCCAAATGTCAACTGTCAAGGAGCAGCTAATTG...ACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
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| CDS-3UTR TCA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTCAATTAGCTGCTCCTTaGCAGTTGACATTTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SETPFRPKTQGILRKSSSQLAAP*QLTFGE Trigger: TTCTCCAAATGTCAACTGTCAAGGAGCAGCTAATTG...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
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| CDS-3UTR GCA 90 bp | ACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTCTTCAGTTTGTCCAATaGAACATCAACAAGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: TTSETPFRPKTQGILRKSLQFVQ*NINKGK Trigger: CTTGCCCTTGTTGATGTTGCATTGGACAAACTGAAG...ACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000544105.5 ENST00000546146.5 |
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| CDS-3UTR GCA 90 bp | ATTTTCACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGACTGCTGCCTTGCACCTaGTGTGACAATAACTATTCT | + |
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Preference number: 4 (lower is better) Translates to: IFTTSETPFRPKTQGILRLLPCT*CDNNYS Trigger: AGAATAGTTATTGTCACAGCAGGTGCAAGGCAGCAG...TCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000544105.5 ENST00000545848.5 |
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| CDS-3UTR CCA 90 bp | TTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCCAAGAGTGGCAGCTTGTGGGGTaGACACCCAACTTTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FFKMDPTKSITDSPIAQEWQLVG*TPNFSP Trigger: TGGAGAAAAGTTGGGTGTCCACCCCACAAGCTGCCA...CTCTTGGGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
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| CDS-3UTR TCA 90 bp | GACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTTATAATTTTCACAACATCTaGGACACCATTCCGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: DTIPPQDTRDTEKEFFFYNFHNI*DTIPPQ Trigger: TTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAATT...ATAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
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| CDS-3UTR GCA 90 bp | GAAGGCACTCTAACATATGTGACATACCTCAGAAGTATAACTTACACCTGTACATCCCTCCTGCTGCCTTaGACCTGCTGTGACAATAAC | + |
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Preference number: 4 (lower is better) Translates to: EGTLTYVTYLRSITYTCTSLLLP*TCCDNN Trigger: GTTATTGTCACAGCAGGTGCAAGGCAGCAGGAGGGA...TGTACAGGTGTAAGTTATACTTCTGAGGTATGTCACATATGTTAGAGTGCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS-3UTR GCA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTATTCCAAAGTGTTTCTaGACTCTTCTTGAAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SETPFRPKTQGILRKSSSIPKCF*TLLEKG Trigger: GCCCTTTTCAAGAAGAGTGCAGAAACACTTTGGAAT...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
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| CDS-3UTR GCA 90 bp | ACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTATTCCAAAGTGTTTCTaGACTCTTCTTGAAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TSETPFRPKTQGILRKSSIPKCF*TLLEKG Trigger: GCCCTTTTCAAGAAGAGTGCAGAAACACTTTGGAAT...AGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
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| CDS-3UTR CCA 90 bp | TTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCCAAGAGCCAATAATCCAACCATaGCAGCTTGTGGGGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FFKMDPTKSITDSPIAQEPIIQP*QLVGWT Trigger: TGTCCACCCCACAAGCTGCCATGGTTGGATTATTGG...CTCTTGGGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
||
| CDS-3UTR CCA 90 bp | ACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTTGACAGTTGACATTTaGAGAACCTTTGAAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTSETPFRPKTQGILRKSLTVDI*RTFEGR Trigger: CCTTCCTTCAAAGGTTCTCCAAATGTCAACTGTCAA...ACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
||
| CDS-3UTR TCA 90 bp | ACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTAGACACAAGGGATACTaGGAAAGAGTTCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TSETPFRPKTQGILRKSSRHKGY*ERVLLL Trigger: TAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCT...AGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
||
| CDS-3UTR TCA 90 bp | ACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTAGACACAAGGGATACTaGGAAAGAGTTCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TTSETPFRPKTQGILRKSRHKGY*ERVLLL Trigger: TAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCT...ACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
||
| CDS-3UTR GCA 90 bp | ATTTTCACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAATTCCAAAGTGTTTCTaGACTCTTCTTGAAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IFTTSETPFRPKTQGILRIPKCF*TLLEKG Trigger: GCCCTTTTCAAGAAGAGTGCAGAAACACTTTGGAAT...TCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGGAAAATCTCTTTACCATTTGCTCGTTCTAATCTTGAGAGACTAGAGTTACTCTTTCACCCAGGCTaGAGTGCCCGGCCACATTTA | + |
|
Preference number: 4 (lower is better) Translates to: KRKISLPFARSNLERLELLFHPG*SARPHL Trigger: TAAATGTGGCCGGGCACTGCAGCCTGGGTGAAAGAG...TAACTCTAGTCTCTCAAGATTAGAACGAGCAAATGGTAAAGAGATTTTCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR CCA 90 bp | GAAGGCACTCTAACATATGTGACATACCTCAGAAGTATAACTTACACCTGTACAATAGCCACATTACGTTaGACCAGGGCAAGGCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGTLTYVTYLRSITYTCTIATLR*TRARRV Trigger: AACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTAT...TGTACAGGTGTAAGTTATACTTCTGAGGTATGTCACATATGTTAGAGTGCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR CCA 90 bp | GAAGGCACTCTAACATATGTGACATACCTCAGAAGTATAACTTACACCTGTACACCAATAATCCAACCATaGCAGCTTGTGGGGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EGTLTYVTYLRSITYTCTPIIQP*QLVGWT Trigger: TGTCCACCCCACAAGCTGCCATGGTTGGATTATTGG...TGTACAGGTGTAAGTTATACTTCTGAGGTATGTCACATATGTTAGAGTGCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGAATGATTGATTTCATTATAGCCACATTACGTTGGACCAGGGCAAGGCGATTGACAGTTGACATTTaGAGAACCTTTGAAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGMIDFIIATLRWTRARRLTVDI*RTFEGR Trigger: CCTTCCTTCAAAGGTTCTCCAAATGTCAACTGTCAA...TCGCCTTGCCCTGGTCCAACGTAATGTGGCTATAATGAAATCAATCATTCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
||
| CDS-3UTR TCA 90 bp | TTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCCAAGAGAATTTTCACAACATCTaGGACACCATTCCGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FFKMDPTKSITDSPIAQENFHNI*DTIPPQ Trigger: TTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAATT...CTCTTGGGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
||
| CDS-3UTR GCA 90 bp | ACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTTATTCCAGCTTCTCAATTAGCTaGTCCTTGACAGTTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: TIPPQDTRDTEKEFFFYSSFSIS*SLTVDI Trigger: AATGTCAACTGTCAAGGAGCAGCTAATTGAGAAGCT...GGAATAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
||
| CDS-3UTR GCA 90 bp | ACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTTATTCCATTCCAAAGTGTTTCTaGACTCTTCTTGAAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIPPQDTRDTEKEFFFYSIPKCF*TLLEKG Trigger: GCCCTTTTCAAGAAGAGTGCAGAAACACTTTGGAAT...GGAATAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTAAAATACACAGCCTaGTATCTTCTGTTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SETPFRPKTQGILRKSSSLKYTA*YLLFSK Trigger: TTTGGAGAACAGAAGATAGCAGGCTGTGTATTTTAA...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTAACTATTCTGGAGTTTaGAGATACACTGTAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SETPFRPKTQGILRKSSSNYSGV*RYTVIF Trigger: GAAGATTACAGTGTATCTGCAAACTCCAGAATAGTT...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
||
| CDS-3UTR CCA 90 bp | CTAACATATGTGACATACCTCAGAAGTATAACTTACACCTGTACAGATTGGGTAAACCATGGCAGCTTGTaGGGTGGACACCCAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTYVTYLRSITYTCTDWVNHGSL*GGHPTF Trigger: AAAAGTTGGGTGTCCACCCCACAAGCTGCCATGGTT...TACCCAATCTGTACAGGTGTAAGTTATACTTCTGAGGTATGTCACATATGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR TCA 90 bp | ACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTTATTCCAGACACAAGGGATACTaGGAAAGAGTTCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TIPPQDTRDTEKEFFFYSRHKGY*ERVLLL Trigger: TAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCT...GGAATAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
||
| CDS-3UTR GCA 90 bp | TTACCATTTGCTCGTTCTAATCTTGAGAGACTAGAGTTATGTCACAGGTCTCCACTTCAGTTTGTCCAATaGAACATCAACAAGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPFARSNLERLELCHRSPLQFVQ*NINKGK Trigger: CTTGCCCTTGTTGATGTTGCATTGGACAAACTGAAG...TGGAGACCTGTGACATAACTCTAGTCTCTCAAGATTAGAACGAGCAAATGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR GCA 90 bp | CCTAAGATTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCTGCTGCCTTGCACCTaGTGTGACAATAACTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKIFQNGSYQIHHRQSNSLLPCT*CDNNYS Trigger: AGAATAGTTATTGTCACAGCAGGTGCAAGGCAGCAG...GCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAATCTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396215.7 |
||
| CDS-3UTR GCA 90 bp | ATTTTCACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGATTAAAATACACAGCCTaGTATCTTCTGTTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IFTTSETPFRPKTQGILRLKYTA*YLLFSK Trigger: TTTGGAGAACAGAAGATAGCAGGCTGTGTATTTTAA...TCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
||
| CDS-3UTR TCA 90 bp | TTACCATTTGCTCGTTCTAATCTTGAGAGACTAGAGTTATGTCACAGGTCTCCAAAAGGGCTTGGTTTGTaGAAAGAATCAAAGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPFARSNLERLELCHRSPKGLGL*KESKLC Trigger: ACAGAGCTTTGATTCTTTTCACAAACCAAGCCCTTT...TGGAGACCTGTGACATAACTCTAGTCTCTCAAGATTAGAACGAGCAAATGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR GCA 90 bp | TTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCCAAGAGAGCTTCTCAATTAGCTaGTCCTTGACAGTTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: FFKMDPTKSITDSPIAQESFSIS*SLTVDI Trigger: AATGTCAACTGTCAAGGAGCAGCTAATTGAGAAGCT...CTCTTGGGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
||
| CDS-3UTR GCA 90 bp | ACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTTATTCCAACTATTCTGGAGTTTaGAGATACACTGTAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TIPPQDTRDTEKEFFFYSNYSGV*RYTVIF Trigger: GAAGATTACAGTGTATCTGCAAACTCCAGAATAGTT...GGAATAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
||
| CDS-3UTR TCA 90 bp | CTAACATATGTGACATACCTCAGAAGTATAACTTACACCTGTACAGATTGGGTACAATTAGCTGCTCCTTaGCAGTTGACATTTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTYVTYLRSITYTCTDWVQLAAP*QLTFGE Trigger: TTCTCCAAATGTCAACTGTCAAGGAGCAGCTAATTG...TACCCAATCTGTACAGGTGTAAGTTATACTTCTGAGGTATGTCACATATGTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR TCA 90 bp | TTACCATTTGCTCGTTCTAATCTTGAGAGACTAGAGTTATGTCACAGGTCTCCAAGACACAAGGGATACTaGGAAAGAGTTCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPFARSNLERLELCHRSPRHKGY*ERVLLL Trigger: TAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCT...TGGAGACCTGTGACATAACTCTAGTCTCTCAAGATTAGAACGAGCAAATGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR TCA 90 bp | ATACCTCAGAAGTATAACTTACACCTGTACAGATTGGGTATCATTAGAATAGAGAATTTTCACAACATCTaGGACACCATTCCGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IPQKYNLHLYRLGIIRIENFHNI*DTIPPQ Trigger: TTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAATT...CTCTATTCTAATGATACCCAATCTGTACAGGTGTAAGTTATACTTCTGAGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR GCA 90 bp | GAAGGCACTCTAACATATGTGACATACCTCAGAAGTATAACTTACACCTGTACAAGCTTCTCAATTAGCTaGTCCTTGACAGTTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: EGTLTYVTYLRSITYTCTSFSIS*SLTVDI Trigger: AATGTCAACTGTCAAGGAGCAGCTAATTGAGAAGCT...TGTACAGGTGTAAGTTATACTTCTGAGGTATGTCACATATGTTAGAGTGCCTTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR GCA 90 bp | AAGAGGAAAATCTCTTTACCATTTGCTCGTTCTAATCTTGAGAGACTAGAGTTACTGCTGCCTTGCACCTaGTGTGACAATAACTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRKISLPFARSNLERLELLLPCT*CDNNYS Trigger: AGAATAGTTATTGTCACAGCAGGTGCAAGGCAGCAG...TAACTCTAGTCTCTCAAGATTAGAACGAGCAAATGGTAAAGAGATTTTCCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR GCA 90 bp | CTAAGATTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCATTCCAAAGTGTTTCTaGACTCTTCTTGAAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRFFKMDPTKSITDSPIAIPKCF*TLLEKG Trigger: GCCCTTTTCAAGAAGAGTGCAGAAACACTTTGGAAT...GGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAATCTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
||
| CDS-3UTR GCA 90 bp | ATGATTGATTTCATTATAGCCACATTACGTTGGACCAGGGCAAGGCGAGTTTCTTTAAAATACACAGCCTaGTATCTTCTGTTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MIDFIIATLRWTRARRVSLKYTA*YLLFSK Trigger: TTTGGAGAACAGAAGATAGCAGGCTGTGTATTTTAA...AGAAACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTATAATGAAATCAATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
||
| CDS-3UTR TCA 90 bp | CCTAAGATTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCAGACACAAGGGATACTaGGAAAGAGTTCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PKIFQNGSYQIHHRQSNSRHKGY*ERVLLL Trigger: TAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCT...GCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAATCTTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
||
| CDS-3UTR GCA 90 bp | AAGAGGAAAATCTCTTTACCATTTGCTCGTTCTAATCTTGAGAGACTAGAGTTAATTCCAAAGTGTTTCTaGACTCTTCTTGAAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRKISLPFARSNLERLELIPKCF*TLLEKG Trigger: GCCCTTTTCAAGAAGAGTGCAGAAACACTTTGGAAT...TAACTCTAGTCTCTCAAGATTAGAACGAGCAAATGGTAAAGAGATTTTCCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR CCA 90 bp | ATACCTCAGAAGTATAACTTACACCTGTACAGATTGGGTATCATTAGAATAGAGTTGACAGTTGACATTTaGAGAACCTTTGAAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPQKYNLHLYRLGIIRIELTVDI*RTFEGR Trigger: CCTTCCTTCAAAGGTTCTCCAAATGTCAACTGTCAA...CTCTATTCTAATGATACCCAATCTGTACAGGTGTAAGTTATACTTCTGAGGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR TCA 90 bp | ATACCTCAGAAGTATAACTTACACCTGTACAGATTGGGTATCATTAGAATAGAGGCTAATGTAATGAAGTaGATATGCTGGTACTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IPQKYNLHLYRLGIIRIEANVMK*ICWYSN Trigger: GTTAGAGTACCAGCATATTCACTTCATTACATTAGC...CTCTATTCTAATGATACCCAATCTGTACAGGTGTAAGTTATACTTCTGAGGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR GCA 90 bp | AAGAGGAAAATCTCTTTACCATTTGCTCGTTCTAATCTTGAGAGACTAGAGTTATTAAAATACACAGCCTaGTATCTTCTGTTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRKISLPFARSNLERLELLKYTA*YLLFSK Trigger: TTTGGAGAACAGAAGATAGCAGGCTGTGTATTTTAA...TAACTCTAGTCTCTCAAGATTAGAACGAGCAAATGGTAAAGAGATTTTCCTCTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR CAA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTCCAACCATGGCAGCTaGTGGGGTGGACACCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: SETPFRPKTQGILRKSSSSNHGS*WGGHPT Trigger: AGTTGGGTGTCCACCCCACAAGCTGCCATGGTTGGA...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
||
| CDS-3UTR CAA 90 bp | ATTTTCACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGATCCAACCATGGCAGCTaGTGGGGTGGACACCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: IFTTSETPFRPKTQGILRSNHGS*WGGHPT Trigger: AGTTGGGTGTCCACCCCACAAGCTGCCATGGTTGGA...TCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000544105.5 ENST00000545848.5 ENST00000546146.5 |
||
| CDS-3UTR CAA 90 bp | GCAGGAATGATTGATTTCATTATAGCCACATTACGTTGGACCAGGGCAAGGCGATCCAACCATGGCAGCTaGTGGGGTGGACACCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: AGMIDFIIATLRWTRARRSNHGS*WGGHPT Trigger: AGTTGGGTGTCCACCCCACAAGCTGCCATGGTTGGA...TCGCCTTGCCCTGGTCCAACGTAATGTGGCTATAATGAAATCAATCATTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000545848.5 |
||
| CDS-3UTR CAA 90 bp | TTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCCCAAGAGTCCAACCATGGCAGCTaGTGGGGTGGACACCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: FFKMDPTKSITDSPIAQESNHGS*WGGHPT Trigger: AGTTGGGTGTCCACCCCACAAGCTGCCATGGTTGGA...CTCTTGGGCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000539369.1 |
||
| CDS-3UTR CAA 90 bp | GGCTCAAGTTATCTACTGGTCTCAGTCTCCCAAGTAGCTGGACTACAGATGCAGTCAATTAGCTGCTCCTaGACAGTTGACATTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSSYLLVSVSQVAGLQMQSISCS*TVDIWR Trigger: TCTCCAAATGTCAACTGTCAAGGAGCAGCTAATTGA...CTGCATCTGTAGTCCAGCTACTTGGGAGACTGAGACCAGTAGATAACTTGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR CAA 90 bp | ACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTACATTTGGAGAACCTTaGAAGGAAGGCACAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSETPFRPKTQGILRKSSTFGEP*KEGTEV Trigger: CACTTCTGTGCCTTCCTTCAAAGGTTCTCCAAATGT...AGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
||
| CDS-3UTR CAA 90 bp | GGCTCAAGTTATCTACTGGTCTCAGTCTCCCAAGTAGCTGGACTACAGATGCAGGTTCTTCTTCTTCTTTaGAGTCTGAGTCTTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSYLLVSVSQVAGLQMQVLLLL*SLSLPL Trigger: CAGAGGAAGACTCAGACTCAAAAGAAGAAGAAGAAC...CTGCATCTGTAGTCCAGCTACTTGGGAGACTGAGACCAGTAGATAACTTGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
||
| CDS-3UTR CAA 90 bp | TCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTCAATTAGCTGCTCCTaGACAGTTGACATTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SETPFRPKTQGILRKSSSSISCS*TVDIWR Trigger: TCTCCAAATGTCAACTGTCAAGGAGCAGCTAATTGA...AGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
||
| CDS-3UTR CAA 90 bp | ACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCAATTAGCTGCTCCTaGACAGTTGACATTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TTSETPFRPKTQGILRKSSISCS*TVDIWR Trigger: TCTCCAAATGTCAACTGTCAAGGAGCAGCTAATTGA...ACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
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| CDS-3UTR CAA 90 bp | CTAACATATGTGACATACCTCAGAAGTATAACTTACACCTGTACAGATTGGGTATCCAACCATGGCAGCTaGTGGGGTGGACACCCAACT | + |
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Preference number: 5 (lower is better) Translates to: LTYVTYLRSITYTCTDWVSNHGS*WGGHPT Trigger: AGTTGGGTGTCCACCCCACAAGCTGCCATGGTTGGA...TACCCAATCTGTACAGGTGTAAGTTATACTTCTGAGGTATGTCACATATGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS-3UTR CAA 90 bp | ATTTTCACAACATCTGAGACACCATTCCGCCCCAAGACACAAGGGATACTGAGAACATTTGGAGAACCTTaGAAGGAAGGCACAGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: IFTTSETPFRPKTQGILRTFGEP*KEGTEV Trigger: CACTTCTGTGCCTTCCTTCAAAGGTTCTCCAAATGT...TCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTCTCAGATGTTGTGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
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| CDS-3UTR CAA 90 bp | TTACCATTTGCTCGTTCTAATCTTGAGAGACTAGAGTTATGTCACAGGTCTCCAACTCATGTGATCCTCTaGCCTCACCCTCCCAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LPFARSNLERLELCHRSPTHVIL*PHPPKA Trigger: TGCTTTGGGAGGGTGAGGCAAGAGGATCACATGAGT...TGGAGACCTGTGACATAACTCTAGTCTCTCAAGATTAGAACGAGCAAATGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS-3UTR CAA 90 bp | CCTAAGATTTTTCAAAATGGATCCTACCAAATCCATCACAGACAGTCCAATAGCTATAGCCACATTACGTaGGACCAGGGCAAGGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: PKIFQNGSYQIHHRQSNSYSHIT*DQGKAS Trigger: ACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTATA...GCTATTGGACTGTCTGTGATGGATTTGGTAGGATCCATTTTGAAAAATCTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396215.7 |
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| CDS-3UTR CAA 90 bp | GACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTTATACATTTGGAGAACCTTaGAAGGAAGGCACAGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: DTIPPQDTRDTEKEFFFYTFGEP*KEGTEV Trigger: CACTTCTGTGCCTTCCTTCAAAGGTTCTCCAAATGT...ATAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
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| CDS-3UTR CAA 90 bp | GACACCATTCCGCCCCAAGACACAAGGGATACTGAGAAAGAGTTCTTCTTTTATTCAATTAGCTGCTCCTaGACAGTTGACATTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: DTIPPQDTRDTEKEFFFYSISCS*TVDIWR Trigger: TCTCCAAATGTCAACTGTCAAGGAGCAGCTAATTGA...ATAAAAGAAGAACTCTTTCTCAGTATCCCTTGTGTCTTGGGGCGGAATGGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000545848.5 |
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| CDS-3UTR CAA 90 bp | GAAGGCACTCTAACATATGTGACATACCTCAGAAGTATAACTTACACCTGTACAGACACAATCATAGCCTaGAACTCCTGGGCTCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: EGTLTYVTYLRSITYTCTDTIIA*NSWAQV Trigger: AACTTGAGCCCAGGAGTTCAAGGCTATGATTGTGTC...TGTACAGGTGTAAGTTATACTTCTGAGGTATGTCACATATGTTAGAGTGCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS-3UTR CAA 90 bp | GAAGGCACTCTAACATATGTGACATACCTCAGAAGTATAACTTACACCTGTACAACATTTGGAGAACCTTaGAAGGAAGGCACAGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: EGTLTYVTYLRSITYTCTTFGEP*KEGTEV Trigger: CACTTCTGTGCCTTCCTTCAAAGGTTCTCCAAATGT...TGTACAGGTGTAAGTTATACTTCTGAGGTATGTCACATATGTTAGAGTGCCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS-3UTR CAA 90 bp | ATACCTCAGAAGTATAACTTACACCTGTACAGATTGGGTATCATTAGAATAGAGTTACACCTGTACAGATaGGGTATCATTAGAATAGAG | + |
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Preference number: 5 (lower is better) Translates to: IPQKYNLHLYRLGIIRIELHLYR*GIIRIE Trigger: CTCTATTCTAATGATACCCAATCTGTACAGGTGTAA...CTCTATTCTAATGATACCCAATCTGTACAGGTGTAAGTTATACTTCTGAGGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541669.6 |
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| CDS TCA 72 bp | ACAGAAGTGACACCAGAAAAATACACCAACGACAGTTaGGGCGCTAAGCCCGTCGACGGTTGCCCTCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: TEVTPEKYTNDS*GAKPVDGCPPC Trigger: GCACGGAGGGCAACCGTCGACGGGCTTAGCGCCTCAACTGTCGTTGGTGTATTTTTCTGGTGTCACTTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000396215.7 ENST00000541669.6 |
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| CDS TCA 72 bp | CATCATCCTCAATTAGCTTCTCAATTAGCTGCTCCTTaGCAGTTGACATTTGGAGAACCTTTGAAGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: HHPQLASQLAAP*QLTFGEPLKEG Trigger: GCCTTCCTTCAAAGGTTCTCCAAATGTCAACTGTCAAGGAGCAGCTAATTGAGAAGCTAATTGAGGATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000541669.6 ENST00000545848.5 |
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| CDS CAA 72 bp | TCATCATCCTCAATTAGCTTCTCAATTAGCTGCTCCTaGACAGTTGACATTTGGAGAACCTTTGAAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSSISFSISCS*TVDIWRTFEGR Trigger: CCTTCCTTCAAAGGTTCTCCAAATGTCAACTGTCAAGGAGCAGCTAATTGAGAAGCTAATTGAGGATGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000396215.7 ENST00000539369.1 ENST00000541669.6 ENST00000545848.5 |
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