Pregenerated sensors for LDHB (Homo sapiens)
Ensembl gene IDs: ENSG00000111716Ensembl transcript IDs: ENST00000396076.5, ENST00000450584.5, ENST00000535112.1, ENST00000539782.1, ENST00000542765.4, ENST00000544151.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGAGACCTCTGTAACAGTCGTGCGGAGAAGACAAAGTCAGCTGCGTaGGTCTCCTCCGGCGCCGGCTCTGCAAGGAGGGAGGAGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GDLCNSRAEKTKSAA*VSSGAGSARREEGA Trigger: CGCCCCCTCCTCCCTCCTTGCAGAGCCGGCGCCGGAGGAGACGCACGCAGCTGACTTTGTCTTCTCCGCACGACTGTTACAGAGGTCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000544151.1 |
||
| CDS GCA 90 bp | GCCCGCGGCCGGATGCTCAGAGCTAAAGGCCGCGGAGGACAGATGTaGTTCTTCCTCCTTCCCGCGTCTCCCCATACAAGTACTACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ARGRMLRAKGRGGQM*FFLLPASPHTSTTP Trigger: CGGGGTAGTACTTGTATGGGGAGACGCGGGAAGGAGGAAGAAGCACATCTGTCCTCCGCGGCCTTTAGCTCTGAGCATCCGGCCGCGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396076.5 |
||
| CDS GCA 90 bp | GGAGACCTCTGTAACAGTCGTGCGGAGAAGACAAAGTCAGCTGCGTaGGTCTCCTCCGGCGCCGGCTCTTCTGTTATCTCCCGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: GDLCNSRAEKTKSAA*VSSGAGSSVISRPP Trigger: GGGTGGCCGGGAGATAACAGAAGAGCCGGCGCCGGAGGAGACGCACGCAGCTGACTTTGTCTTCTCCGCACGACTGTTACAGAGGTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535112.1 |
||
| CDS CCA 90 bp | CTCCCCATACAAGTACTACCCCGCACGTCCCATCAGGCTTGCCTGTaGGCCAGGATTCAGGGTCCTGAGCCGAAACCTACCAGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPIQVLPRTSHQACL*ARIQGPEPKPTRRE Trigger: CTCTCTCCTGGTAGGTTTCGGCTCAGGACCCTGAATCCTGGCCCACAGGCAAGCCTGATGGGACGTGCGGGGTAGTACTTGTATGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396076.5 |
||
| CDS GCA 90 bp | GCTGGTAAAGTAAACGAAGCCCCTAAGCATCCAGAAAAGAGGCCCTaGAGGAAAGAACTGGCGCATGGCTCCAGGAGAGAGAAGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGKVNEAPKHPEKRP*RKELAHGSRREKAL Trigger: CAGAGCCTTCTCTCTCCTGGAGCCATGCGCCAGTTCTTTCCTGCAGGGCCTCTTTTCTGGATGCTTAGGGGCTTCGTTTACTTTACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450584.5 |
||
| CDS GCA 90 bp | GCCGGCTCTTCTGTTATCTCCCGGCCACCCCGAAGTTGTCTTTTCTaGTTTCCGTATTTCCACCTATGTCTTCCTCACAGAACGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGSSVISRPPRSCLF*FPYFHLCLPHRTSS Trigger: GGAAGACGTTCTGTGAGGAAGACATAGGTGGAAATACGGAAAGCAGAAAAGACAACTTCGGGGTGGCCGGGAGATAACAGAAGAGCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535112.1 |
||
| CDS GCA 72 bp | TGTAACAGTCGTGCGGAGAAGACAAAGTCAGCTGCGTaGGTCTCCTCCGGCGCCGGCTCTGCAAGGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CNSRAEKTKSAA*VSSGAGSARRE Trigger: CTCCCTCCTTGCAGAGCCGGCGCCGGAGGAGACGCACGCAGCTGACTTTGTCTTCTCCGCACGACTGTTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544151.1 |
||
| CDS TCA 72 bp | CCATCAGGCTTGCCTGTGGGCCAGGATTCAGGGTCCTaGGCCGAAACCTACCAGGAGAGAGAAGGCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSGLPVGQDSGS*AETYQEREGSG Trigger: TCCAGAGCCTTCTCTCTCCTGGTAGGTTTCGGCTCAGGACCCTGAATCCTGGCCCACAGGCAAGCCTGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396076.5 |
||
| CDS GCA 72 bp | TGTAACAGTCGTGCGGAGAAGACAAAGTCAGCTGCGTaGGTCTCCTCCGGCGCCGGCTCTTCTGTTATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CNSRAEKTKSAA*VSSGAGSSVIS Trigger: GGAGATAACAGAAGAGCCGGCGCCGGAGGAGACGCACGCAGCTGACTTTGTCTTCTCCGCACGACTGTTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535112.1 |
||
| CDS TCA 72 bp | CCTGGTTTTAGCTGCAAATGCAACAAGTCTCTCCGCTaGGCCGCAGCTGCTACCCTCTGCCTTCTGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PGFSCKCNKSLR*AAAATLCLLLL Trigger: GAGGAGCAGAAGGCAGAGGGTAGCAGCTGCGGCTCAGCGGAGAGACTTGTTGCATTTGCAGCTAAAACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396076.5 |
||
| CDS CCA 72 bp | CAACCACCGCAGCCTCTTAGGTTTCTCCATTGTGATTaGAAATCCGAGTACCGCCTACCCCTCCCCTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QPPQPLRFLHCD*KSEYRLPLPSA Trigger: AGCCGAGGGGAGGGGTAGGCGGTACTCGGATTTCCAATCACAATGGAGAAACCTAAGAGGCTGCGGTGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544151.1 |
||
| CDS CAA 90 bp | CTCCTCCGGCGCCGGCTCTTCTGTTATCTCCCGGCCACCCCGAAGTaGTCTTTTCTGCTTTCCGTATTTCCACCTATGTCTTCCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LLRRRLFCYLPATPK*SFLLSVFPPMSSSQ Trigger: CTGTGAGGAAGACATAGGTGGAAATACGGAAAGCAGAAAAGACAACTTCGGGGTGGCCGGGAGATAACAGAAGAGCCGGCGCCGGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535112.1 |
||
| CDS GCA 72 bp | AGTTGCCATTTTGCATGCAGCTTGTACTGCTCGCGGTaGGCACAAACCATCTTTTCCTCAGGGCACCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SCHFACSLYCSR*AQTIFSSGHRQ Trigger: CTGCCGGTGCCCTGAGGAAAAGATGGTTTGTGCGCACCGCGAGCAGTACAAGCTGCATGCAAAATGGCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450584.5 |
||
| CDS CAA 72 bp | CGCCGGCTCTTCTGTTATCTCCCGGCCACCCCGAAGTaGTCTTTTCTGCTTTCCGTATTTCCACCTATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRLFCYLPATPK*SFLLSVFPPMS Trigger: AGACATAGGTGGAAATACGGAAAGCAGAAAAGACAACTTCGGGGTGGCCGGGAGATAACAGAAGAGCCGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535112.1 |
||
| CDS GCA 72 bp | GTCTGTCTGCAGACCAGTACAGATCTACTACAGCTCTaGAATGTCCCGAAATTGCTGTCTGCTCTGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VCLQTSTDLLQL*NVPKLLSALAS Trigger: AGAAGCCAGAGCAGACAGCAATTTCGGGACATTGCAGAGCTGTAGTAGATCTGTACTGGTCTGCAGACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539782.1 |
||
| CDS GCA 72 bp | TCTGTTATCTCCCGGCCACCCCGAAGTTGTCTTTTCTaGTTTCCGTATTTCCACCTATGTCTTCCTCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVISRPPRSCLF*FPYFHLCLPHR Trigger: TCTGTGAGGAAGACATAGGTGGAAATACGGAAAGCAGAAAAGACAACTTCGGGGTGGCCGGGAGATAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000535112.1 ENST00000539782.1 |
||
| CDS CAA 90 bp | AAACCAGACCTGACTTTGACTACTGCTCTGTCTCTAACTATAATCTaGGGCAAATTATTTACCCTTTATTGCCTTAGTGTTCCCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KPDLTLTTALSLTII*GKLFTLYCLSVPFL Trigger: CAAAAAGGGAACACTAAGGCAATAAAGGGTAAATAATTTGCCCAAGATTATAGTTAGAGACAGAGCAGTAGTCAAAGTCAGGTCTGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542765.4 |
||
| CDS TCA 72 bp | AATTCCAAGGTGCCCAAAGAAACTGTGTATACATGCTaGACTTCTCTATCATCTATGGTGTTCTTGAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: NSKVPKETVYTC*TSLSSMVFLKC Trigger: ACATTTCAAGAACACCATAGATGATAGAGAAGTTCAGCATGTATACACAGTTTCTTTGGGCACCTTGGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544151.1 |
||
| CDS GCA 72 bp | TCAATCATTATTGAAACCAGACCTGACTTTGACTACTaGTCTGTCTCTAACTATAATCTTGGGCAAATTATT | + |
|
Preference number: 6 (lower is better) Translates to: SIIIETRPDFDY*SVSNYNLGQII Trigger: AATAATTTGCCCAAGATTATAGTTAGAGACAGAGCAGTAGTCAAAGTCAGGTCTGGTTTCAATAATGATTGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542765.4 |
||