Pregenerated sensors for LDHAL6A (Homo sapiens)
Ensembl gene IDs: ENSG00000166800Ensembl transcript IDs: ENST00000280706.3, ENST00000396213.7, ENST00000615355.4
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTaGAGGCTGAAGTGGGAGGCTCACCTGAGCTCGGGAGGTCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: KLGRHGGTRMWSHLL*RLKWEAHLSSGGQG Trigger: ACCTTGACCTCCCGAGCTCAGGTGAGCCTCCCACTTCAGCCTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| 3UTR-3UTR TCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACAGGTCAAGGTTGCAGTaGGCCATGATTGTGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHRSRLQ*AMIVPL Trigger: CAGTGGCACAATCATGGCTCACTGCAACCTTGACCT...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| 3UTR-3UTR CCA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCAAAATTAGGCAGGCATaGAGGCACACGCATGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: VISALWEFKTSLDDMAKPKIRQA*RHTHVV Trigger: GACCACATGCGTGTGCCTCCATGCCTGCCTAATTTT...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR GCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCAGGCCGGAAGCGGGCTaGGAAGCACCGCGCCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLRPEAG*EAPRLR Trigger: GCGCAGGCGCGGTGCTTCGCAGCCCGCTTCCGGCCT...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396213.7 |
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| CDS-3UTR TCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCCCACACTCACAGGGGTaGAGGGCCACCCGCGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLPHSQG*RATRAR Trigger: TCGGGCGCGGGTGGCCCTTCACCCCTGTGAGTGTGG...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR GCA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGGCTCCCCAGGACTCTTaGAGCCCAGCTCATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TKIRQAWRHTHVVPPTLEAPQDS*SPAHGH Trigger: GTGGCCATGAGCTGGGCTGCAAGAGTCCTGGGGAGC...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR GCA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCGGGTCGCCCCCTTACTaGAGCTGCGCGGACCGCACC | + |
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Preference number: 4 (lower is better) Translates to: VISALWEFKTSLDDMAKPGSPPY*SCADRT Trigger: GGTGCGGTCCGCGCAGCTGCAGTAAGGGGGCGACCC...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGGGAGGCACACGCATGTaGTCCCACCTACTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKIRQAWRHTHVVPPTLEGGTRM*SHLLWR Trigger: CCTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCC...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR GCA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCCCCCTTACTGCAGCTaGGCGGACCGCACCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSPPYCS*ADRTQL Trigger: GAGCTGGGTGCGGTCCGCGCAGCTGCAGTAAGGGGG...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 56% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR GCA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCCCCCCTTACTGCAGCTaGGCGGACCGCACCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VISALWEFKTSLDDMAKPPPYCS*ADRTQL Trigger: GAGCTGGGTGCGGTCCGCGCAGCTGCAGTAAGGGGG...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 56% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR GCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACTCTCAGCTCCAGGACTaGGCCCGGGGTCCGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHSQLQD*ARGPQV Trigger: GACCTGCGGACCCCGGGCGCAGTCCTGGAGCTGAGA...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCGCGGCGCCCGCTCTCTaGCTGCTCCCCAGGACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSAAPAL*LLPRTL Trigger: AAGAGTCCTGGGGAGCAGCCAGAGAGCGGGCGCCGC...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGTGGTCCCACCTACTCTaGAGGCTGAAGTGGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: TKIRQAWRHTHVVPPTLEWSHLL*RLKWEA Trigger: AGCCTCCCACTTCAGCCTCCAGAGTAGGTGGGACCA...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR TCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCGCAGCTCAGCATCCATaGAGCGGACCAGGGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLAAQHP*SGPGEG Trigger: TCCTTCCCCTGGTCCGCTTCATGGATGCTGAGCTGC...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCCCGAGCAGGTCACATaGCGCCTGGCGGAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHPEQVT*RLAETQ Trigger: CTGTGTCTCCGCCAGGCGGCATGTGACCTGCTCGGG...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGTTGCAGCCCAGCTCATaGCCACTCACTCAAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TKIRQAWRHTHVVPPTLELQPSS*PLTQEV Trigger: CACCTCTTGAGTGAGTGGCCATGAGCTGGGCTGCAA...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR GCA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGCCGTGTGGAAGGAGGTaGTGCAGACACACAAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: TKIRQAWRHTHVVPPTLEPCGRR*CRHTKD Trigger: GTCTTTTGTGTGTCTGCAGCACCTCCTTCCACACGG...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGTCCCACCTACTCTaGAGGCTGAAGTGGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLWSHLL*RLKWEA Trigger: AGCCTCCCACTTCAGCCTCCAGAGTAGGTGGGACCA...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR TCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACGTCCGCAGGTCCAGGTaGGAGGTACTTCTGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHVRRSR*EVLLAT Trigger: TGTGGCCAGAAGTACCTCTCACCTGGACCTGCGGAC...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACACCGCACCCAGCTCGTaGAGGCATCGCAGGTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHTAPSS*RHRRCD Trigger: ATCACACCTGCGATGCCTGCACGAGCTGGGTGCGGT...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCACTCCTGGGCCCGTGTaGAAGGAGGTGCTGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: VISALWEFKTSLDDMAKPTPGPV*KEVLQT Trigger: TGTCTGCAGCACCTCCTTCCACACGGGCCCAGGAGT...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCTCTGGAGGCTGAAGTaGGAGGCTCACCTGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSLWRLK*EAHLSS Trigger: CGAGCTCAGGTGAGCCTCCCACTTCAGCCTCCAGAG...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCCTCTGGAGGCTGAAGTaGGAGGCTCACCTGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: VISALWEFKTSLDDMAKPLWRLK*EAHLSS Trigger: CGAGCTCAGGTGAGCCTCCCACTTCAGCCTCCAGAG...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCGGAGGCACACGCATGTaGTCCCACCTACTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VISALWEFKTSLDDMAKPGGTRM*SHLLWR Trigger: CCTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCC...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR TCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTTGCTCCACCAAACATaGAACTACAGCTGGGACGGC | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLLLHQT*NYSWDG Trigger: GCCGTCCCAGCTGTAGTTTCATGTTTGGTGGAGCAA...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR TCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCAGGTCAAGGTTGCAGTaGGCCATGATTGTGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLRSRLQ*AMIVPL Trigger: CAGTGGCACAATCATGGCTCACTGCAACCTTGACCT...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACAGGTCACATGCCGCCTaGCGGAGACACAGAACCATC | + |
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Preference number: 4 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHRSHAA*RRHRTI Trigger: GATGGTTCTGTGTCTCCGCCAGGCGGCATGTGACCT...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACAAGCTGGGTAGGTTCTaGCCAGGCAGCTCAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHKLGRF*PGSSAS Trigger: GGATGCTGAGCTGCCTGGCCAGAACCTACCCAGCTT...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR GCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGTGGAAGGAGGTGCTaGAGACACACAAAAGACCGA | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLCGRRC*RHTKDR Trigger: TCGGTCTTTTGTGTGTCTGCAGCACCTCCTTCCACA...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCGTATAGAGAACTCCTaGGCCCGTGTGGAAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSRIENS*ARVEGG Trigger: ACCTCCTTCCACACGGGCCCAGGAGTTCTCTATACG...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCAAAATTAGGCAGGCATaGAGGCACACGCATGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLKIRQA*RHTHVV Trigger: GACCACATGCGTGTGCCTCCATGCCTGCCTAATTTT...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR TCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCAAAGACCGACAAATCTaGCCAGCAAAGAAGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLKDRQI*PAKKLG Trigger: ACCCAGCTTCTTTGCTGGTCAGATTTGTCGGTCTTT...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR TCA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCAGGTCAAGGTTGCAGTaGGCCATGATTGTGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSRSRLQ*AMIVPL Trigger: CAGTGGCACAATCATGGCTCACTGCAACCTTGACCT...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGACCTGGAATTGGAAATaGCTTGGAATTCCAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: TKIRQAWRHTHVVPPTLETWNWK*LGIPRP Trigger: AGGTCTTGGAATTCCAAGCCATTTCCAATTCCAGGT...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGTCTTATTGTGATGAATaGCCTCCTCTTCCGCGAAAT | + |
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Preference number: 4 (lower is better) Translates to: TKIRQAWRHTHVVPPTLESYCDE*PPLPRN Trigger: ATTTCGCGGAAGAGGAGGCCATTCATCACAATAAGA...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGGTAATCTCAGCACTTTaGGAGTTCAAAACCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TKIRQAWRHTHVVPPTLEVISAL*EFKTSL Trigger: CAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACAAAATTAGGCAGGCATaGAGGCACACGCATGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHKIRQA*RHTHVV Trigger: GACCACATGCGTGTGCCTCCATGCCTGCCTAATTTT...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTCTTATTGTGATGAATaGCCTCCTCTTCCGCGAAAT | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLSYCDE*PPLPRN Trigger: ATTTCGCGGAAGAGGAGGCCATTCATCACAATAAGA...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR GCA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCGAAAGGAACAGGGGTTaGTCCACCAAACATGAAACT | + |
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Preference number: 4 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSERNRG*STKHET Trigger: AGTTTCATGTTTGGTGGAGCAACCCCTGTTCCTTTC...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCACACAGAACCATCCTTaGGCAAAAACAATTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSTQNHP*AKTIRS Trigger: GGAGCGAATTGTTTTTGCCCAAGGATGGTTCTGTGT...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCAGTTCAAAACCAGCTTaGATGACATGGCAAAACCCC | + |
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Preference number: 4 (lower is better) Translates to: VISALWEFKTSLDDMAKPSSKPA*MTWQNP Trigger: GGGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACT...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR TCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCATACAAGGCAAGTACTaGGAAGTACCAAAAACATCT | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLIQGKY*EVPKTS Trigger: AGATGTTTTTGGTACTTCTCAGTACTTGCCTTGTAT...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR GCA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTTCACTCTTGATAGTTaGCATCTTGGAAACTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLFTLDS*HLGNSR Trigger: TCTTGAGTTTCCAAGATGGCAACTATCAAGAGTGAA...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACTCCAAGACCTGGAATTaGAAATGGCTTGGAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHSKTWN*KWLGIP Trigger: TGGAATTCCAAGCCATTTCCAATTCCAGGTCTTGGA...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CCA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCGTAATCTCAGCACTTTaGGAGTTCAAAACCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSVISAL*EFKTSL Trigger: CAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCATGGATACATTTCGCTaGACTAAATCAAGGCGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VISALWEFKTSLDDMAKPMDTFR*TKSRRV Trigger: AACACGCCTTGATTTAGTCCAGCGAAATGTATCCAT...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCATGGATACATTTCGCTaGACTAAATCAAGGCGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSMDTFR*TKSRRV Trigger: AACACGCCTTGATTTAGTCCAGCGAAATGTATCCAT...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CCA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACTTCTTGTGGACCAGATaGCAATTACGTATACATACA | + |
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Preference number: 4 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHFLWTR*QLRIHT Trigger: TGTATGTATACGTAATTGCCATCTGGTCCACAAGAA...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS GCA 90 bp | AAGGAGATGAACCGCCGACTAACAGACGCCGGGTCGCCCCCTTACTaGAGCTGCGCGGACCGCACCCAGCTCGTGCAGGCATCGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: KEMNRRLTDAGSPPY*SCADRTQLVQASQV Trigger: CACCTGCGATGCCTGCACGAGCTGGGTGCGGTCCGCGCAGCTGCAGTAAGGGGGCGACCCGGCGTCTGTTAGTCGGCGGTTCATCTCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280706.3 ENST00000396213.7 ENST00000615355.4 |
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| CDS GCA 90 bp | CTTTACCCTGCTGTTCCCCCAACCTCCAGTTCTCAGCTCCAGGACTaGGCCCGGGGTCCGCAGGTCCAGGTGAGAGGTACTTCTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LYPAVPPTSSSQLQD*ARGPQVQVRGTSGH Trigger: GTGGCCAGAAGTACCTCTCACCTGGACCTGCGGACCCCGGGCGCAGTCCTGGAGCTGAGAACTGGAGGTTGGGGGAACAGCAGGGTAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS CCA 90 bp | ACAGGGGTGAAGGGCCACCCGCGCCCGAGCAGGTCACATGCCGCCTaGCGGAGACACAGAACCATCCTTGGGCAAAAACAATTCGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: TGVKGHPRPSRSHAA*RRHRTILGQKQFAP Trigger: GGGAGCGAATTGTTTTTGCCCAAGGATGGTTCTGTGTCTCCGCCAGGCGGCATGTGACCTGCTCGGGCGCGGGTGGCCCTTCACCCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS GCA 90 bp | CACACTCACAGGGGTGAAGGGCCACCCGCGCCCGAGCAGGTCACATaGCGCCTGGCGGAGACACAGAACCATCCTTGGGCAAAAACAATT | + |
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Preference number: 5 (lower is better) Translates to: HTHRGEGPPAPEQVT*RLAETQNHPWAKTI Trigger: AATTGTTTTTGCCCAAGGATGGTTCTGTGTCTCCGCCAGGCGGCATGTGACCTGCTCGGGCGCGGGTGGCCCTTCACCCCTGTGAGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS TCA 90 bp | CCGTGTGGAAGGAGGTGCTGCAGACACACAAAAGACCGACAAATCTaGCCAGCAAAGAAGCTGGGTAGGTTCTGGCCAGGCAGCTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PCGRRCCRHTKDRQI*PAKKLGRFWPGSSA Trigger: TGCTGAGCTGCCTGGCCAGAACCTACCCAGCTTCTTTGCTGGTCAGATTTGTCGGTCTTTTGTGTGTCTGCAGCACCTCCTTCCACACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CAA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCTGCTCCCCAGGACTCTaGCAGCCCAGCTCATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: VISALWEFKTSLDDMAKPCSPGL*QPSSWP Trigger: TGGCCATGAGCTGGGCTGCAAGAGTCCTGGGGAGCA...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS GCA 90 bp | CAGTTAAGAGGAATTAAGAGAGAGAGAGAGGAAAGGAACAGGGGTTaGTCCACCAAACATGAAACTACAGCTGGGACGGCACTCCGTCCC | + |
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Preference number: 5 (lower is better) Translates to: QLRGIKREREERNRG*STKHETTAGTALRP Trigger: GGGACGGAGTGCCGTCCCAGCTGTAGTTTCATGTTTGGTGGAGCAACCCCTGTTCCTTTCCTCTCTCTCTCTCTTAATTCCTCTTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS TCA 90 bp | CAGCTCAGCATCCATGAAGCGGACCAGGGGAAGGAGAAGGAAGCGTaGGTACAGTTAAGAGGAATTAAGAGAGAGAGAGAGGAAAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: QLSIHEADQGKEKEA*VQLRGIKREREERN Trigger: GTTCCTTTCCTCTCTCTCTCTCTTAATTCCTCTTAACTGTACTCACGCTTCCTTCTCCTTCCCCTGGTCCGCTTCATGGATGCTGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CAA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGGTGGATGCCAAGCCTTaGCCCAATAAAGTAACGAAA | + |
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Preference number: 5 (lower is better) Translates to: TKIRQAWRHTHVVPPTLEVDAKP*PNKVTK Trigger: TTTCGTTACTTTATTGGGCAAAGGCTTGGCATCCAC...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CAA 90 bp | ACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCTGGAGAACAGTGAAGACAAATaGCACAGCCATTTCCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: TKIRQAWRHTHVVPPTLENSEDK*HSHFQD Trigger: GTCTTGGAAATGGCTGTGCAATTTGTCTTCACTGTT...CTCCAGAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CAA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACGGAATTGGAAATGGCTaGGAATTCCAAGACCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHGIGNG*EFQDLR Trigger: CCGCAGGTCTTGGAATTCCAAGCCATTTCCAATTCC...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CAA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCGTGGATGCCAAGCCTTaGCCCAATAAAGTAACGAAA | + |
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Preference number: 5 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLVDAKP*PNKVTK Trigger: TTTCGTTACTTTATTGGGCAAAGGCTTGGCATCCAC...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CAA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCTGTTTCTGCACTCTTTaGCAAGCAGGCCTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSCFCTL*QAGLLF Trigger: GAAGAGGAGGCCTGCTTGCAAAAGAGTGCAGAAACA...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CAA 90 bp | GTAATCTCAGCACTTTGGGAGTTCAAAACCAGCTTGGATGACATGGCAAAACCCTGTTTCTGCACTCTTTaGCAAGCAGGCCTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: VISALWEFKTSLDDMAKPCFCTL*QAGLLF Trigger: GAAGAGGAGGCCTGCTTGCAAAAGAGTGCAGAAACA...GGGTTTTGCCATGTCATCCAAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CAA 90 bp | AAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACCTACTCACAGTAAACACATTCTaGTGGACCAGATGGCAATTA | + |
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Preference number: 5 (lower is better) Translates to: KIQKLGRHGGTRMWSHLLTVNTF*WTRWQL Trigger: TAATTGCCATCTGGTCCACAAGAATGTGTTTACTGT...GAGTAGGTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS-3UTR CAA 90 bp | TACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCCACTGTAATCTCAGCACTTaGGGAGTTCAAAACCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: YKKIQKLGRHGGTRMWSHCNLST*GVQNQL Trigger: AAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTACA...GTGGGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CAA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCTGTAATCTCAGCACTTaGGGAGTTCAAAACCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSCNLST*GVQNQL Trigger: AAGCTGGTTTTGAACTCCCAAAGTGCTGAGATTACA...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000280706.3 ENST00000396213.7 |
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| CDS-3UTR CAA 90 bp | CTCTACAAAAAGATACAAAAATTAGGCAGGCATGGAGGCACACGCATGTGGTCCTTGATAGTTGCCATCTaGGAAACTCAAGAGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LYKKIQKLGRHGGTRMWSLIVAI*ETQEVK Trigger: CTTCACCTCTTGAGTTTCCAAGATGGCAACTATCAA...GGACCACATGCGTGTGCCTCCATGCCTGCCTAATTTTTGTATCTTTTTGTAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000396213.7 |
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| CDS GCA 72 bp | CGACTAACAGACGCCGGGTCGCCCCCTTACTGCAGCTaGGCGGACCGCACCCAGCTCGTGCAGGCATCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RLTDAGSPPYCS*ADRTQLVQASQ Trigger: CTGCGATGCCTGCACGAGCTGGGTGCGGTCCGCGCAGCTGCAGTAAGGGGGCGACCCGGCGTCTGTTAGTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280706.3 ENST00000396213.7 ENST00000615355.4 |
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| CDS GCA 72 bp | AACCGCCGACTAACAGACGCCGGGTCGCCCCCTTACTaGAGCTGCGCGGACCGCACCCAGCTCGTGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: NRRLTDAGSPPY*SCADRTQLVQA Trigger: TGCCTGCACGAGCTGGGTGCGGTCCGCGCAGCTGCAGTAAGGGGGCGACCCGGCGTCTGTTAGTCGGCGGTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280706.3 ENST00000396213.7 ENST00000615355.4 |
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| CDS GCA 72 bp | AGGGGTGAAGGGCCACCCGCGCCCGAGCAGGTCACATaGCGCCTGGCGGAGACACAGAACCATCCTTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RGEGPPAPEQVT*RLAETQNHPWA Trigger: TGCCCAAGGATGGTTCTGTGTCTCCGCCAGGCGGCATGTGACCTGCTCGGGCGCGGGTGGCCCTTCACCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS TCA 72 bp | AGCTCCAGGACTGCGCCCGGGGTCCGCAGGTCCAGGTaGGAGGTACTTCTGGCCACACTCACAGGGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSRTAPGVRRSR*EVLLATLTGVK Trigger: CTTCACCCCTGTGAGTGTGGCCAGAAGTACCTCTCACCTGGACCTGCGGACCCCGGGCGCAGTCCTGGAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS GCA 72 bp | GCTGTTCCCCCAACCTCCAGTTCTCAGCTCCAGGACTaGGCCCGGGGTCCGCAGGTCCAGGTGAGAGGTACT | + |
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Preference number: 6 (lower is better) Translates to: AVPPTSSSQLQD*ARGPQVQVRGT Trigger: AGTACCTCTCACCTGGACCTGCGGACCCCGGGCGCAGTCCTGGAGCTGAGAACTGGAGGTTGGGGGAACAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS CCA 72 bp | GGGCAAAAACAATTCGCTCCCGCGGCGCCCGCTCTCTaGCTGCTCCCCAGGACTCTTGCAGCCCAGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: GQKQFAPAAPAL*LLPRTLAAQLM Trigger: CATGAGCTGGGCTGCAAGAGTCCTGGGGAGCAGCCAGAGAGCGGGCGCCGCGGGAGCGAATTGTTTTTGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS CCA 72 bp | GTCACATGCCGCCTGGCGGAGACACAGAACCATCCTTaGGCAAAAACAATTCGCTCCCGCGGCGCCCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VTCRLAETQNHP*AKTIRSRGARS Trigger: AGAGCGGGCGCCGCGGGAGCGAATTGTTTTTGCCCAAGGATGGTTCTGTGTCTCCGCCAGGCGGCATGTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS CCA 72 bp | CCAAGACCTGCGGTGAGAGCGCGTATAGAGAACTCCTaGGCCCGTGTGGAAGGAGGTGCTGCAGACACACAA | + |
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Preference number: 6 (lower is better) Translates to: PRPAVRARIENS*ARVEGGAADTQ Trigger: TTGTGTGTCTGCAGCACCTCCTTCCACACGGGCCCAGGAGTTCTCTATACGCGCTCTCACCGCAGGTCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS TCA 72 bp | GAGAGAGGAAAGGAACAGGGGTTGCTCCACCAAACATaGAACTACAGCTGGGACGGCACTCCGTCCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ERGKEQGLLHQT*NYSWDGTPSRS Trigger: GCTGCGGGACGGAGTGCCGTCCCAGCTGTAGTTTCATGTTTGGTGGAGCAACCCCTGTTCCTTTCCTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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| CDS TCA 72 bp | AGGAGGTGCTGCAGACACACAAAAGACCGACAAATCTaGCCAGCAAAGAAGCTGGGTAGGTTCTGGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RRCCRHTKDRQI*PAKKLGRFWPG Trigger: GCCTGGCCAGAACCTACCCAGCTTCTTTGCTGGTCAGATTTGTCGGTCTTTTGTGTGTCTGCAGCACCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280706.3 |
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