RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LDB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000122367

Ensembl transcript IDs: ENST00000263066.11, ENST00000361373.9, ENST00000372056.8, ENST00000372066.8, ENST00000429277.7, ENST00000477489.1, ENST00000542786.2, ENST00000623007.3, ENST00000623056.4

Found 1115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGATGGTGGCCTTGCCGCCCAGCCCCTTCACCTCGATGGGCTTGTaGGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTGAAGCGT +
Preference number: 1 (lower is better)
Translates to: MMVALPPSPFTSMGL*VDRAESFRALGLKR
Trigger: ACGCTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGCTGGGCGGCAAGGCCACCATCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR CCA 90 bp TTGGTGGGTACAGAGCTGCAGGGGGCTGGGCCCCAGCATCAGCTCTaGGGTGGGCAGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGT +
Preference number: 1 (lower is better)
Translates to: LVGTELQGAGPQHQL*GGQRTEMLRLAIRG
Trigger: ACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCTGTACCCACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR GCA 90 bp TCCCCATTCCCCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTaGCAGCAGCAGGAGCAGCTCCGGGCCTCGTCAGCACAGGCGGCC +
Preference number: 1 (lower is better)
Translates to: SPFPSEETSASRILC*QQQEQLRASSAQAA
Trigger: GGCCGCCTGTGCTGACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGGGGAATGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CCA 90 bp GCCCCCACCTCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCC +
Preference number: 1 (lower is better)
Translates to: APTSPLPGGVSASLP*GFYFLFKEPYSGLP
Trigger: GGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CCA 90 bp ATGGCATCCTGGGAATACATGCTGATGGGCGTGTTGTACTGCGCATaGATGATGGTGGCCTTGCCGCCCAGCCCCTTCACCTCGATGGGC +
Preference number: 1 (lower is better)
Translates to: MASWEYMLMGVLYCA*MMVALPPSPFTSMG
Trigger: GCCCATCGAGGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCATCAGCATGTATTCCCAGGATGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR GCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATaGCCCCACCTCACCACTGCCAGGAGGGGTCTCTGCCTCATTACC +
Preference number: 1 (lower is better)
Translates to: RELWSQHTRYRKEGA*PHLTTARRGLCLIT
Trigger: GGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR GCA 90 bp GAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTaGATGCCCCCACCTCACCACTGCCAGGAGGGGTCTCTGCCTCAT +
Preference number: 1 (lower is better)
Translates to: EERTMEPAHTVQKGG*MPPPHHCQEGSLPH
Trigger: ATGAGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR GCA 90 bp TCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTGTACTaGGCATGGATGATGGTGGCCTTGCCGCCCAGCCCCTTCACCTCG +
Preference number: 1 (lower is better)
Translates to: SMMASWEYMLMGVLY*AWMMVALPPSPFTS
Trigger: CGAGGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR GCA 90 bp GGCCAGGATGCGGAAGGAGCGAGACTGCAGGTTGGAGGAACGGCGTaGCCACTCGTCAGCCTCATCTTCTGGCTTGTTCTGGCTCTTAAT +
Preference number: 1 (lower is better)
Translates to: GQDAEGARLQVGGTA*PLVSLIFWLVLALN
Trigger: ATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCTCCTTCCGCATCCTGGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR CCA 90 bp CTGCAGGTTGGAGGAACGGCGTGCCCACTCGTCAGCCTCATCTTCTaGCTTGTTCTGGCTCTTAATCACAGCCTGGTAGACGGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: LQVGGTACPLVSLIF*LVLALNHSLVDGRG
Trigger: GCCTCTCCCGTCTACCAGGCTGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAACCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR CCA 90 bp GGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTaGGGTGTTATGCCAGCAAACCCCTCCTGCCCTCTCTGGTCTACA +
Preference number: 1 (lower is better)
Translates to: GWWETEQRPIHFPWF*GVMPANPSCPLWST
Trigger: TGTAGACCAGAGAGGGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR GCA 90 bp TTAATAGGGAGGCTCCCACTGAAGTCACTGCCTTGGGCTTGGGCCTaGCCAGCGATGGCATCCATGATGGCATCCTGGGAATACATGCTG +
Preference number: 1 (lower is better)
Translates to: LIGRLPLKSLPWAWA*PAMASMMASWEYML
Trigger: CAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAGTGGGAGCCTCCCTATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR CCA 90 bp CCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTaGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCAT +
Preference number: 1 (lower is better)
Translates to: PSISSGVGRGQKCCG*PSEVPPAELYIVKH
Trigger: ATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR TCA 90 bp TGCAGACCTGAAGGTGGGAGGTCCTGCCTCCTCGTGTGTTCTTACTaGGGGTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTG +
Preference number: 1 (lower is better)
Translates to: CRPEGGRSCLLVCSY*GWQKVSFLFPTQSL
Trigger: CAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCACCCTCAGTAAGAACACACGAGGAGGCAGGACCTCCCACCTTCAGGTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR TCA 90 bp TTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGGTCTaGAGTCTGATGCGCAGAGGTAGCTCCATGACGCTAGTAATGGAA +
Preference number: 1 (lower is better)
Translates to: LDVRAPKKVLSLFKV*SLMRRGSSMTLVME
Trigger: TTCCATTACTAGCGTCATGGAGCTACCTCTGCGCATCAGACTTCAGACCTTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR GCA 90 bp GAGCCTAAATATCGTGCTCAAGTGAGAAACATCCACGCAAGTGCCTaGTTCAATGCCATGTTTTCAATGAGCATATTAACAGGGCTTCCT +
Preference number: 1 (lower is better)
Translates to: EPKYRAQVRNIHASA*FNAMFSMSILTGLP
Trigger: AGGAAGCCCTGTTAATATGCTCATTGAAAACATGGCATTGAAGCAGGCACTTGCGTGGATGTTTCTCACTTGAGCACGATATTTAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CCA 90 bp TCTAAGCTCTGTCCTCCTCTGGTGACCAAAGCAAGTGTATCGCTTTaGGAAAGCTGCTTGTTGCTTTTCACTTTTGAGTTCTTGGAATTC +
Preference number: 1 (lower is better)
Translates to: SKLCPPLVTKASVSL*ESCLLLFTFEFLEF
Trigger: GAATTCCAAGAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCAAAGCGATACACTTGCTTTGGTCACCAGAGGAGGACAGAGCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CCA 90 bp TTCCTTCTCCCTCATGGAGAAGAGACAGGTAAGATGGCAATCCCCTaGAAGTCTCAGTCCTTAGAAGAAAAGAGTTCTAATACATTCCCA +
Preference number: 1 (lower is better)
Translates to: FLLPHGEETGKMAIP*KSQSLEEKSSNTFP
Trigger: TGGGAATGTATTAGAACTCTTTTCTTCTAAGGACTGAGACTTCCAGGGGATTGCCATCTTACCTGTCTCTTCTCCATGAGGGAGAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR TCA 90 bp CATGCAAAGAGAAAAATCCAAAACAGGAGTGAGGACAGAATAGAGTaGGTTGGAAGAGAGCCTAAATATCGTGCTCAAGTGAGAAACATC +
Preference number: 1 (lower is better)
Translates to: HAKRKIQNRSEDRIE*VGREPKYRAQVRNI
Trigger: GATGTTTCTCACTTGAGCACGATATTTAGGCTCTCTTCCAACTCACTCTATTCTGTCCTCACTCCTGTTTTGGATTTTTCTCTTTGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR GCA 90 bp TGGGAAAGCTGCTTGTTGCTTTTCACTTTTGAGTTCTTGGAATTCTaGTCTAAATGTCTGAAGTACAATTCCAGTCTTGGATTAATAACT +
Preference number: 1 (lower is better)
Translates to: WESCLLLFTFEFLEF*SKCLKYNSSLGLIT
Trigger: AGTTATTAATCCAAGACTGGAATTGTACTTCAGACATTTAGAGCAGAATTCCAAGAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACGGGCTACGGGCTATTTaGGGGGTGGCGAGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: AREPGSARDQPLPQTLIYGLRAI*GVARVA
Trigger: GGCAACCCTCGCCACCCCCCAAATAGCCCGTAGCCC...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CAA 90 bp TGGATGATGGTGGCCTTGCCGCCCAGCCCCTTCACCTCGATGGGCTaGTGGGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTGAAG +
Preference number: 2 (lower is better)
Translates to: WMMVALPPSPFTSMG*WVDRAESFRALGLK
Trigger: CTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR GCA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCACCCCCACCTCACCACTaGCAGGAGGGGTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPPPPHH*QEGSLP
Trigger: AGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGG...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGATGGTGGGTACAGAGCTaGAGGGGGCTGGGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: SITVGLTCQICVGVRMEGWWVQS*RGLGPS
Trigger: GCTGGGGCCCAGCCCCCTGCAGCTCTGTACCCACCA...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCTGGTGGGTACAGAGCTaGAGGGGGCTGGGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: LGLLLPLQRALFRAALSSWWVQS*RGLGPS
Trigger: GCTGGGGCCCAGCCCCCTGCAGCTCTGTACCCACCA...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCTGGTGGGTACAGAGCTaGAGGGGGCTGGGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLWWVQS*RGLGPS
Trigger: GCTGGGGCCCAGCCCCCTGCAGCTCTGTACCCACCA...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTGGTGGGTACAGAGCTaGAGGGGGCTGGGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ENYGASTHGTERRVHAPTWWVQS*RGLGPS
Trigger: GCTGGGGCCCAGCCCCCTGCAGCTCTGTACCCACCA...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCACCTTGGGCTTGGGCCTaGCCAGCGATGGCATCCATG +
Preference number: 2 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPPWAWA*PAMASM
Trigger: CATGGATGCCATCGCTGGGCAGGCCCAAGCCCAAGG...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR CAA 90 bp CTCCCCATTCCCCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTaGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCAGCACAGGCGGC +
Preference number: 2 (lower is better)
Translates to: LPIPLRRNISLPNPL*PAAGAAPGLVSTGG
Trigger: GCCGCCTGTGCTGACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGGGGAATGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACCCCCACCTCACCACTaGCAGGAGGGGTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: YGASTHGTERRVHAPTSPPPPHH*QEGSLP
Trigger: AGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGG...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCAAGAAAGGAGGGTGCATaGCCCCACCTCACCACTGCC +
Preference number: 2 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPRKEGA*PHLTTA
Trigger: GGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCT...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCAGAGCTGCAGGGGGCTaGGCCCCAGCATCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: ENYGASTHGTERRVHAPTRAAGG*APASAL
Trigger: CAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCT...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCGGGCTACGGGCTATTTaGGGGGTGGCGAGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: LGLLLPLQRALFRAALSSGLRAI*GVARVA
Trigger: GGCAACCCTCGCCACCCCCCAAATAGCCCGTAGCCC...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CAA 90 bp TACATGCTGATGGGCGTGTTGTACTGCGCATGGATGATGGTGGCCTaGCCGCCCAGCCCCTTCACCTCGATGGGCTTGTGGGTGGACAGG +
Preference number: 2 (lower is better)
Translates to: YMLMGVLYCAWMMVA*PPSPFTSMGLWVDR
Trigger: CCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCATCAGCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR GCA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCACCAGCAAACCCCTCCTaGCCTCTCTGGTCTACAGCT +
Preference number: 2 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPPANPS*PLWSTA
Trigger: AGCTGTAGACCAGAGAGGGCAGGAGGGGTTTGCTGG...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGGGTTCTGGGGTGTTATaGCAGCAAACCCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: GASTHGTERRVHAPTSPLGSGVL*QQTPPA
Trigger: GGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACC...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCCCCCACCTCACCACTaGCAGGAGGGGTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCPPPHH*QEGSLP
Trigger: AGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGG...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCAGAGCTGCAGGGGGCTaGGCCCCAGCATCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGRAAGG*APASAL
Trigger: CAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCT...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCAAGAGCTGCAGGGGGCTaGGCCCCAGCATCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPRAAGG*APASAL
Trigger: CAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCT...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGGGGCTACGGGCTATTTaGGGGGTGGCGAGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQGLRAI*GVARVA
Trigger: GGCAACCCTCGCCACCCCCCAAATAGCCCGTAGCCC...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACCCCATCCATTTCCCTTaGTTCTGGGGTGTTATGCCA +
Preference number: 2 (lower is better)
Translates to: AREPGSARDQPLPQTLIYPIHFP*FWGVMP
Trigger: TGGCATAACACCCCAGAACCAAGGGAAATGGATGGG...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CAA 90 bp TCTCTCCCCATTCCCCTCAGAAGAAACATCAGCCTCCCGAATCCTTaGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCAGCACAGGC +
Preference number: 2 (lower is better)
Translates to: SLPIPLRRNISLPNP*LPAAGAAPGLVSTG
Trigger: GCCTGTGCTGACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGGGGAATGGGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCTCTTCCCCAGACCCTaGTCTACGGGTGACTCATTC +
Preference number: 2 (lower is better)
Translates to: GASTHGTERRVHAPTSPLLFPRP*STGDSF
Trigger: GAATGAGTCACCCGTAGATCAGGGTCTGGGGAAGAG...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR TCA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCACTCTTCCCCAGACCCTaGTCTACGGGTGACTCATTC +
Preference number: 2 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPLFPRP*STGDSF
Trigger: GAATGAGTCACCCGTAGATCAGGGTCTGGGGAAGAG...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGATGGCGAGGGTTGCCCTaGGGAGGTTTGGTGGGTACA +
Preference number: 2 (lower is better)
Translates to: SITVGLTCQICVGVRMEGWRGLP*GGLVGT
Trigger: TGTACCCACCAAACCTCCCCAGGGCAACCCTCGCCA...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCGGGCTACGGGCTATTTaGGGGGTGGCGAGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCGLRAI*GVARVA
Trigger: GGCAACCCTCGCCACCCCCCAAATAGCCCGTAGCCC...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGACCTCGATGGGCTTGTaGGTGGACAGGGCCGAGTCC +
Preference number: 2 (lower is better)
Translates to: SSITVGLTCQICVGVRMETSMGL*VDRAES
Trigger: GGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGT...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACGCCCCTTCACCTCGATaGGCTTGTGGGTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: RELWSQHTRYRKEGACPHAPSPR*ACGWTG
Trigger: CCCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGC...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCTCACTGCCTTGGGCTTaGGCCTGCCCAGCGATGGCA +
Preference number: 2 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCSLPWA*ACPAMA
Trigger: TGCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGA...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR TCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCGATGAGGCCAGGAGCTaGGGATGGTGGGAAACTGAG +
Preference number: 2 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLDEARS*GWWETE
Trigger: CTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCATC...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR TCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGACCCTGATCTACGGGTaGCTCATTCTAGGAGGGGAT +
Preference number: 2 (lower is better)
Translates to: GASTHGTERRVHAPTSPLTLIYG*LILGGD
Trigger: ATCCCCTCCTAGAATGAGTCACCCGTAGATCAGGGT...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACA +
Preference number: 2 (lower is better)
Translates to: GASTHGTERRVHAPTSPLVGHQR*PQQSYT
Trigger: TGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCCCAGCAAACCCCTCCTaGCCTCTCTGGTCTACAGCT +
Preference number: 2 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLPANPS*PLWSTA
Trigger: AGCTGTAGACCAGAGAGGGCAGGAGGGGTTTGCTGG...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACCAGCAAACCCCTCCTaGCCTCTCTGGTCTACAGCT +
Preference number: 2 (lower is better)
Translates to: YGASTHGTERRVHAPTSPPANPS*PLWSTA
Trigger: AGCTGTAGACCAGAGAGGGCAGGAGGGGTTTGCTGG...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCGGTTCTGGGGTGTTATaGCAGCAAACCCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: ENYGASTHGTERRVHAPTGSGVL*QQTPPA
Trigger: GGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACC...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACTGGCGAGGGTTGCCCTaGGGAGGTTTGGTGGGTACA +
Preference number: 2 (lower is better)
Translates to: RELWSQHTRYRKEGACPHWRGLP*GGLVGT
Trigger: TGTACCCACCAAACCTCCCCAGGGCAACCCTCGCCA...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCTGGCGAGGGTTGCCCTaGGGAGGTTTGGTGGGTACA +
Preference number: 2 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCWRGLP*GGLVGT
Trigger: TGTACCCACCAAACCTCCCCAGGGCAACCCTCGCCA...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACAGAGGGCAGGGGATTaGGCTACGGGCTATTTGGGG +
Preference number: 2 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPQRAGD*ATGYLG
Trigger: CCCCAAATAGCCCGTAGCCCAATCCCCTGCCCTCTG...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CAA 90 bp ATGGCATCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTaGTACTGCGCATGGATGATGGTGGCCTTGCCGCCCAGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: MASMMASWEYMLMGV*YCAWMMVALPPSPF
Trigger: GAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR TCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACAGGATGGTGGGAAACTaGGCAGCGGCCCATCCATTT +
Preference number: 2 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHRMVGN*AAAHPF
Trigger: AAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCT...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR TCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCAAGGATGGTGGGAAACTaGGCAGCGGCCCATCCATTT +
Preference number: 2 (lower is better)
Translates to: YGASTHGTERRVHAPTSPRMVGN*AAAHPF
Trigger: AAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCT...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR TCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCAGGATGGTGGGAAACTaGGCAGCGGCCCATCCATTT +
Preference number: 2 (lower is better)
Translates to: ENYGASTHGTERRVHAPTRMVGN*AAAHPF
Trigger: AAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCT...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR TCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACTCAGGGCACTGGGGTTaGAGCGTTCCTGGTAGTCGG +
Preference number: 2 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYSGHWG*SVPGSR
Trigger: CCGACTACCAGGAACGCTTCAACCCCAGTGCCCTGA...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR TCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAATGTACTGCGCATGGATaGTGGTGGCCTTGCCGCCCA +
Preference number: 2 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKCTAHG*WWPCRP
Trigger: TGGGCGGCAAGGCCACCATCATCCATGCGCAGTACA...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR GCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCACCGTGGGGCTCACATaGCAGATCTGTGTGGGGGTA +
Preference number: 2 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCTVGLT*QICVGV
Trigger: TACCCCCACACAGATCTGGCATGTGAGCCCCACGGT...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACACCGTGGGGCTCACATaGCAGATCTGTGTGGGGGTA +
Preference number: 2 (lower is better)
Translates to: RELWSQHTRYRKEGACPHTVGLT*QICVGV
Trigger: TACCCCCACACAGATCTGGCATGTGAGCCCCACGGT...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCAACCGTGGGGCTCACATaGCAGATCTGTGTGGGGGTA +
Preference number: 2 (lower is better)
Translates to: NYGASTHGTERRVHAPTSTVGLT*QICVGV
Trigger: TACCCCCACACAGATCTGGCATGTGAGCCCCACGGT...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTGGTTCTGGGGTGTTATaGCAGCAAACCCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: TTARRGLCLITLGLLLPLGSGVL*QQTPPA
Trigger: GGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACC...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCGGTTCTGGGGTGTTATaGCAGCAAACCCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCGSGVL*QQTPPA
Trigger: GGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACC...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCGCATCAGCTCTGGGGTaGGCAGAGGACAGAAATGCT +
Preference number: 2 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLASALG*AEDRNA
Trigger: AGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGC...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGAGGGCAGGGGATTaGGCTACGGGCTATTTGGGG +
Preference number: 2 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCQRAGD*ATGYLG
Trigger: CCCCAAATAGCCCGTAGCCCAATCCCCTGCCCTCTG...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCATCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPSASLP*GFYFLF
Trigger: GAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGA...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GCTGTCTACGGCAAGGTCCTTAATAGGGAGGCTCCCACTGAAGTCACTGCCTTGCGATGGGCTTGTGGGTaGACAGGGCCGAGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: AVYGKVLNREAPTEVTALRWACG*TGPSPS
Trigger: TGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCG...CAAGGCAGTGACTTCAGTGGGAGCCTCCCTATTAAGGACCTTGCCGTAGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR CAA 90 bp AATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: NAAVGHQRCPQQSYT*SSITVGLTCQICVG
Trigger: CCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR TCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGAGGATGGTGGGAAACTaGGCAGCGGCCCATCCATTT +
Preference number: 2 (lower is better)
Translates to: SSITVGLTCQICVGVRMERMVGN*AAAHPF
Trigger: AAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCT...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR TCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAACCCTGATCTACGGGTaGCTCATTCTAGGAGGGGAT +
Preference number: 2 (lower is better)
Translates to: SITVGLTCQICVGVRMEGTLIYG*LILGGD
Trigger: ATCCCCTCCTAGAATGAGTCACCCGTAGATCAGGGT...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR TCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCTCTTCCCCAGACCCTaGTCTACGGGTGACTCATTC +
Preference number: 2 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCLFPRP*STGDSF
Trigger: GAATGAGTCACCCGTAGATCAGGGTCTGGGGAAGAG...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp CCCAGCGATGGCATCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTACCGTGGGGCTCACATaGCAGATCTGTGTGGGGGTA +
Preference number: 2 (lower is better)
Translates to: PSDGIHDGILGIHADGRVTVGLT*QICVGV
Trigger: TACCCCCACACAGATCTGGCATGTGAGCCCCACGGT...AACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR GCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: ENYGASTHGTERRVHAPTRGQKC*GWPSEV
Trigger: CACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCGGTTCTGGGGTGTTATaGCAGCAAACCCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCGSGVL*QQTPPA
Trigger: GGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACC...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACTGTCAAGCATCACCGTaGGGCTCACATGCCAGATCT +
Preference number: 2 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHCQASP*GSHARS
Trigger: AGATCTGGCATGTGAGCCCCACGGTGATGCTTGACA...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTGTCAAGCATCACCGTaGGGCTCACATGCCAGATCT +
Preference number: 2 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLCQASP*GSHARS
Trigger: AGATCTGGCATGTGAGCCCCACGGTGATGCTTGACA...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGAAATGCTGCGGTTaGCCATCAGAGGTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCQKCCG*PSEVPP
Trigger: TGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTG...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTGGGCTGAAAGGCCATaGTGCCAGTTGCGCAATTTG +
Preference number: 2 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLWAERP*CQLRNL
Trigger: CAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCA...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR GCA 90 bp TGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATACCGTGGGGCTCACATaGCAGATCTGTGTGGGGGTA +
Preference number: 2 (lower is better)
Translates to: CCGWPSEVPPAELYIVKHTVGLT*QICVGV
Trigger: TACCCCCACACAGATCTGGCATGTGAGCCCCACGGT...ATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACA +
Preference number: 2 (lower is better)
Translates to: TTARRGLCLITLGLLLPLVGHQR*PQQSYT
Trigger: TGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: SSITVGLTCQICVGVRMERGQKC*GWPSEV
Trigger: CACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GCTGTCTACGGCAAGGTCCTTAATAGGGAGGCTCCCACTGAAGTCACTGCCTTGATGGGCGTGTTGTACTaGGCATGGATGATGGTGGCC +
Preference number: 2 (lower is better)
Translates to: AVYGKVLNREAPTEVTALMGVLY*AWMMVA
Trigger: GGCCACCATCATCCATGCGCAGTACAACACGCCCAT...CAAGGCAGTGACTTCAGTGGGAGCCTCCCTATTAAGGACCTTGCCGTAGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR GCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCAGGCCATGGTGCCAGTTaGGCAATTTGGCAAAACGTG +
Preference number: 2 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPGHGAS*AIWQNV
Trigger: CACGTTTTGCCAAATTGCGCAACTGGCACCATGGCC...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCATGTCAAGCATCACCGTaGGGCTCACATGCCAGATCT +
Preference number: 2 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPCQASP*GSHARS
Trigger: AGATCTGGCATGTGAGCCCCACGGTGATGCTTGACA...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCTCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLSASLP*GFYFLF
Trigger: GAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGA...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAAGCCAGAGCCCTTCCTaGAGCCCTGGCAATTGCCCA +
Preference number: 2 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLSQSPS*SPGNCP
Trigger: TGGGCAATTGCCAGGGCTCCAGGAAGGGCTCTGGCT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAGCCAGTTGCGCAATTTaGCAAAACGTGGGCTGTTAC +
Preference number: 2 (lower is better)
Translates to: SITVGLTCQICVGVRMEGASCAI*QNVGCY
Trigger: GTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGC...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR GCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACA +
Preference number: 2 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCVGHQR*PQQSYT
Trigger: TGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTTGGAGCCCTGGCAATTaGCCAGTGGCTCCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: PPRVWACEPILPSCFRHCWSPGN*PVAPRR
Trigger: TCTTCTGGGAGCCACTGGGCAATTGCCAGGGCTCCA...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACTGTCAAGCATCACCGTaGGGCTCACATGCCAGATCT +
Preference number: 2 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYCQASP*GSHARS
Trigger: AGATCTGGCATGTGAGCCCCACGGTGATGCTTGACA...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp CAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCGCATCAGCTCTGGGGTaGGCAGAGGACAGAAATGCT +
Preference number: 2 (lower is better)
Translates to: QKRELWSQHTRYRKEGACASALG*AEDRNA
Trigger: AGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGC...GCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCCATTTCCCTTGGTTCTaGGGTGTTATGCCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: LGLLLPLQRALFRAALSSHFPWF*GVMPAN
Trigger: GTTTGCTGGCATAACACCCCAGAACCAAGGGAAATG...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGCCCATCCATTTCCCTTaGTTCTGGGGTGTTATGCCA +
Preference number: 2 (lower is better)
Translates to: SSITVGLTCQICVGVRMEPIHFP*FWGVMP
Trigger: TGGCATAACACCCCAGAACCAAGGGAAATGGATGGG...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGTCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: SSITVGLTCQICVGVRMESASLP*GFYFLF
Trigger: GAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGA...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGSASLP*GFYFLF
Trigger: GAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGA...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACCCTTCCTGGAGCCCTaGCAATTGCCCAGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGPFLEP*QLPSGS
Trigger: GGAGCCACTGGGCAATTGCCAGGGCTCCAGGAAGGG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp GAGGCGCTGTCTACGGCAAGGTCCTTAATAGGGAGGCTCCCACTGAAGTCACTGTCCATGATGGCATCCTaGGAATACATGCTGATGGGC +
Preference number: 2 (lower is better)
Translates to: EALSTARSLIGRLPLKSLSMMAS*EYMLMG
Trigger: GCCCATCAGCATGTATTCCCAGGATGCCATCATGGA...CAGTGACTTCAGTGGGAGCCTCCCTATTAAGGACCTTGCCGTAGACAGCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGCCACCAAGCCTATTTaGGATGGAGGGTACTGGGGG +
Preference number: 2 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFATKPI*DGGYWG
Trigger: CCCCCAGTACCCTCCATCTCAAATAGGCTTGGTGGC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp CAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: QKRELWSQHTRYRKEGACRGQKC*GWPSEV
Trigger: CACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT...GCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp TGCCCACTCGTCAGCCTCATCTTCTGGCTTGTTCTGGCTCTTAATCACAGCCTGAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: CPLVSLIFWLVLALNHSLRGQKC*GWPSEV
Trigger: CACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT...CAGGCTGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGACGAGTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CCA 90 bp AATTTGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACCTTTCCCTTGACCTTAGAGCTGCAGGGGGCTaGGCCCCAGCATCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: NLAKRGLLRSVSNLSLDLRAAGG*APASAL
Trigger: CAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCT...AAGGTCAAGGGAAAGGTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCATTTCCCTTGGTTCTaGGGTGTTATGCCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: TTARRGLCLITLGLLLPLHFPWF*GVMPAN
Trigger: GTTTGCTGGCATAACACCCCAGAACCAAGGGAAATG...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGCATTTCCCTTGGTTCTaGGGTGTTATGCCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: SSITVGLTCQICVGVRMEHFPWF*GVMPAN
Trigger: GTTTGCTGGCATAACACCCCAGAACCAAGGGAAATG...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTCCCTTCCTGGAGCCCTaGCAATTGCCCAGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: SKCKLELDTALLLTLHQTPFLEP*QLPSGS
Trigger: GGAGCCACTGGGCAATTGCCAGGGCTCCAGGAAGGG...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCTGAGAGAGGGTGGCTaGCAGGGCCATCTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFLREGG*QGHLFS
Trigger: TGAGAAAAGATGGCCCTGTCAGCCACCCTCTCTCAG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGGGAGACGTCATAAGTaGGCAGTCACAAGTTGGGGT +
Preference number: 2 (lower is better)
Translates to: PPRVWACEPILPSCFRHCGRRHK*AVTSWG
Trigger: ACCCCAACTTGTGACTGCTCACTTATGACGTCTCCC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTCCCGAATCCTTTGTTaGCAGCAGCAGGAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFSRILC*QQQEQL
Trigger: GAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATGGAGCCCTGGCAATTaGCCAGTGGCTCCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGWSPGN*PVAPRR
Trigger: TCTTCTGGGAGCCACTGGGCAATTGCCAGGGCTCCA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTACTTTTCTCAGCTGTCTaGAACCTGAGCCAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLLFSAV*NLSQSP
Trigger: AGGGCTCTGGCTCAGGTTGCAGACAGCTGAGAAAAG...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCTTTTCTCAGCTGTCTaGAACCTGAGCCAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: PPRVWACEPILPSCFRHCLFSAV*NLSQSP
Trigger: AGGGCTCTGGCTCAGGTTGCAGACAGCTGAGAAAAG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp CAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCATCCATTTCCCTTaGTTCTGGGGTGTTATGCCA +
Preference number: 2 (lower is better)
Translates to: QKRELWSQHTRYRKEGACPIHFP*FWGVMP
Trigger: TGGCATAACACCCCAGAACCAAGGGAAATGGATGGG...GCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTACAGACTGAGAGAGGGTaGCTGACAGGGCCATCTTTT +
Preference number: 2 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLQTERG*LTGPSF
Trigger: AAAAGATGGCCCTGTCAGCCACCCTCTCTCAGTCTG...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTGTCAGCCTCATCTTCTaGCTTGTTCTGGCTCTTAAT +
Preference number: 2 (lower is better)
Translates to: TTARRGLCLITLGLLLPLVSLIF*LVLALN
Trigger: ATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGAC...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTCTGTCCTCCTCTGGTaGCCAAAGCAAGTGTATCGC +
Preference number: 2 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFSVLLW*PKQVYR
Trigger: GCGATACACTTGCTTTGGTCACCAGAGGAGGACAGA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACTGAGAGAGGGTGGCTaGCAGGGCCATCTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGLREGG*QGHLFS
Trigger: TGAGAAAAGATGGCCCTGTCAGCCACCCTCTCTCAG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGCCAGGAGGGGTCTCTaGCTCATTACCCTGGGGCTT +
Preference number: 2 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEARRGL*LITLGL
Trigger: AAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGC...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGCAGAGGGCAGGGGATTaGGCTACGGGCTATTTGGGG +
Preference number: 2 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEQRAGD*ATGYLG
Trigger: CCCCAAATAGCCCGTAGCCCAATCCCCTGCCCTCTG...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp AATTTGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACCTTTCCCTTGACCTTCAGAGGGCAGGGGATTaGGCTACGGGCTATTTGGGG +
Preference number: 2 (lower is better)
Translates to: NLAKRGLLRSVSNLSLDLQRAGD*ATGYLG
Trigger: CCCCAAATAGCCCGTAGCCCAATCCCCTGCCCTCTG...AAGGTCAAGGGAAAGGTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCAGAAGACATCTCTTTaGACGTCCGGGCTCCCAAGA +
Preference number: 2 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFQKTSL*TSGLPR
Trigger: TCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCTG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCTGGCAATTGCCCAGTaGCTCCCAGAAGACATCTCT +
Preference number: 2 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFLAIAQ*LPEDIS
Trigger: AGAGATGTCTTCTGGGAGCCACTGGGCAATTGCCAG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 90 bp ACAAATCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTaGTATTCACCTTCTCACAGATCCAAAGGTAGGAAGGGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: TNLQAVPADFTLPAA*YSPSHRSKGRKGPV
Trigger: CACAGGGCCCTTCCTACCTTTGGATCTGTGAGAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATCTGTCCTCCTCTGGTaGCCAAAGCAAGTGTATCGC +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGSVLLW*PKQVYR
Trigger: GCGATACACTTGCTTTGGTCACCAGAGGAGGACAGA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATCAAGGTCTGAAGTCTaGTGCGCAGAGGTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGSRSEV*CAEVAP
Trigger: TGGAGCTACCTCTGCGCATCAGACTTCAGACCTTGA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTGGATGTTTCAGACTaGGAGAGGGTGGCTGACAGG +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGLDVSD*ERVADR
Trigger: CCTGTCAGCCACCCTCTCTCAGTCTGAAACATCCAA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAACACGGCCTTACTCCTaGCACTACACCAGACTCACA +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGTRPYS*HYTRLT
Trigger: TGTGAGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGCCAGCAAACCCCTCCTaGCCTCTCTGGTCTACAGCT +
Preference number: 2 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEPANPS*PLWSTA
Trigger: AGCTGTAGACCAGAGAGGGCAGGAGGGGTTTGCTGG...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGAAGGTGGGAGGTCCTaGCTCCTCGTGTGTTCTTAC +
Preference number: 2 (lower is better)
Translates to: SKCKLELDTALLLTLHQTEGGRS*LLVCSY
Trigger: GTAAGAACACACGAGGAGGCAGGACCTCCCACCTTC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAGCAGCGAGTGCTGTTTaGCACTTCAATTTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLAASAV*HFNLFA
Trigger: GGCAAACAAATTGAAGTGCCAAACAGCACTCGCTGC...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACTGGCAATTGCCCAGTaGCTCCCAGAAGACATCTCT +
Preference number: 2 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGLAIAQ*LPEDIS
Trigger: AGAGATGTCTTCTGGGAGCCACTGGGCAATTGCCAG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACAAGCCTATTTGAGATaGAGGGTACTGGGGGAGACG +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGQAYLR*RVLGET
Trigger: CGTCTCCCCCAGTACCCTCCATCTCAAATAGGCTTG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTTTGGATGTTTCAGACTaGGAGAGGGTGGCTGACAGG +
Preference number: 2 (lower is better)
Translates to: SKCKLELDTALLLTLHQTLDVSD*ERVADR
Trigger: CCTGTCAGCCACCCTCTCTCAGTCTGAAACATCCAA...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACAGATTCTCCACAGCTaGTCTAAGCTCTGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGQILHS*SKLCPP
Trigger: AGGAGGACAGAGCTTAGAGCAGCTGTGGAGAATCTG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp AATTTGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACCTTTCCCTTGACCTTGCATCAGCTCTGGGGTaGGCAGAGGACAGAAATGCT +
Preference number: 2 (lower is better)
Translates to: NLAKRGLLRSVSNLSLDLASALG*AEDRNA
Trigger: AGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGC...AAGGTCAAGGGAAAGGTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGGTAGGAAGGGCCCTGTaGCAGGAGCACATCCATGTC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKVGRAL*QEHIHV
Trigger: GACATGGATGTGCTCCTGCCACAGGGCCCTTCCTAC...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 90 bp ACATTAAGGATTTGGGCTGAAAGGCCATGGTGCCAGTTGCGCAATTaGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACCTTTCCCTT +
Preference number: 2 (lower is better)
Translates to: TLRIWAERPWCQLRN*AKRGLLRSVSNLSL
Trigger: AAGGGAAAGGTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCAAATCCTTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR TCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAATTTGGCTCCTAGTCTaGACTATGCAAATGCACGAT +
Preference number: 2 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLIWLLV*TMQMHD
Trigger: ATCGTGCATTTGCATAGTTCAGACTAGGAGCCAAAT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp AATTTGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACCTTTCCCTTGACCTTGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACA +
Preference number: 2 (lower is better)
Translates to: NLAKRGLLRSVSNLSLDLVGHQR*PQQSYT
Trigger: TGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC...AAGGTCAAGGGAAAGGTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR GCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTCAGATTCTCCACAGCTaGTCTAAGCTCTGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: SKCKLELDTALLLTLHQTQILHS*SKLCPP
Trigger: AGGAGGACAGAGCTTAGAGCAGCTGTGGAGAATCTG...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCACTCTAAAAATACCCTaGAGCGAGTGCTGTTTGGCA +
Preference number: 2 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFTLKIP*SECCLA
Trigger: TGCCAAACAGCACTCGCTGCAGGGTATTTTTAGAGT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCATGTGAGCCTATTCTaGCATCCTGTTTCAGACACT +
Preference number: 2 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFHVSLF*HPVSDT
Trigger: AGTGTCTGAAACAGGATGGCAGAATAGGCTCACATG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTAGGGACATAGCTAGCTaGTTCCTTCTCCCTCATGGA +
Preference number: 2 (lower is better)
Translates to: SKCKLELDTALLLTLHQTRDIAS*FLLPHG
Trigger: TCCATGAGGGAGAAGGAAGCAGCTAGCTATGTCCCT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp AATGAAACTTTGTTCGACTGTGATGTATCGAGGCATCATGGTGTTTGCCAGCTTCCACTTCCTCCCTCCTaGCTCTTCTCAGAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: NETLFDCDVSRHHGVCQLPLPPS*LFSESQ
Trigger: CTGGCTTTCTGAGAAGAGGCAGGAGGGAGGAAGTGG...AAGCTGGCAAACACCATGATGCCTCGATACATCACAGTCGAACAAAGTTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477489.1
3UTR-3UTR GCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGCTGAAAGGCCATGGTaGCAGTTGCGCAATTTGGCA +
Preference number: 2 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEAERPW*QLRNLA
Trigger: TGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGC...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAAAGAGACAGGTAAGATaGCAATCCCCTGGAAGTCTC +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGKRQVR*QSPGSL
Trigger: GAGACTTCCAGGGGATTGCCATCTTACCTGTCTCTT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 90 bp TCTAAAAATACCCTGCAGCGAGTGCTGTTTGGCACTTCAATTTGTTaGCCAGGGGAGCGCTTAAGAACTCCGCAGAATGCTTCAGATTCT +
Preference number: 2 (lower is better)
Translates to: SKNTLQRVLFGTSIC*PGERLRTPQNASDS
Trigger: AGAATCTGAAGCATTCTGCGGAGTTCTTAAGCGCTCCCCTGGCAAACAAATTGAAGTGCCAAACAGCACTCGCTGCAGGGTATTTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTTCTGAACTATGCAAATaGACGATCTGTGTACAGAAG +
Preference number: 2 (lower is better)
Translates to: PPRVWACEPILPSCFRHCSELCK*TICVQK
Trigger: CTTCTGTACACAGATCGTGCATTTGCATAGTTCAGA...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAATACCCTGCAGCGAGTaGTGTTTGGCACTTCAATTT +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGIPCSE*CLALQF
Trigger: AAATTGAAGTGCCAAACAGCACTCGCTGCAGGGTAT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAATACCCTGCAGCGAGTaGTGTTTGGCACTTCAATTT +
Preference number: 2 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGIPCSE*CLALQF
Trigger: AAATTGAAGTGCCAAACAGCACTCGCTGCAGGGTAT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAACTCTAAAAATACCCTaGAGCGAGTGCTGTTTGGCA +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGTLKIP*SECCLA
Trigger: TGCCAAACAGCACTCGCTGCAGGGTATTTTTAGAGT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCACAGAGGGCAGGGGATTaGGCTACGGGCTATTTGGGG +
Preference number: 2 (lower is better)
Translates to: LYFRTSMLICTEERTMEPQRAGD*ATGYLG
Trigger: CCCCAAATAGCCCGTAGCCCAATCCCCTGCCCTCTG...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGCAGAAGAGAGAACTATaGAGCCAGCACACACGGTAC +
Preference number: 2 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEQKREL*SQHTRY
Trigger: GTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCAGAAGACATCTCTTTaGACGTCCGGGCTCCCAAGA +
Preference number: 2 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYQKTSL*TSGLPR
Trigger: TCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCTG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCAAGTGCCTGCTTCAATaGCATGTTTTCAATGAGCAT +
Preference number: 2 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFKCLLQ*HVFNEH
Trigger: ATGCTCATTGAAAACATGGCATTGAAGCAGGCACTT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTATCCACGCAAGTGCCTaGTTCAATGCCATGTTTTCA +
Preference number: 2 (lower is better)
Translates to: SKCKLELDTALLLTLHQTIHASA*FNAMFS
Trigger: TGAAAACATGGCATTGAAGCAGGCACTTGCGTGGAT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGAGGGACATAGCTAGCTaGTTCCTTCTCCCTCATGGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKRDIAS*FLLPHG
Trigger: TCCATGAGGGAGAAGGAAGCAGCTAGCTATGTCCCT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGAGCGAGACTGCAGGTTaGAGGAACGGCGTGCCCACT +
Preference number: 2 (lower is better)
Translates to: LLYFRTSMLICTEERTMESETAG*RNGVPT
Trigger: AGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCT...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR TCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTTCAAGGTCTGAAGTCTaGTGCGCAGAGGTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFSRSEV*CAEVAP
Trigger: TGGAGCTACCTCTGCGCATCAGACTTCAGACCTTGA...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATAGTTTGTTCAAGGTCTaGAGTCTGATGCGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYSLFKV*SLMRRG
Trigger: ACCTCTGCGCATCAGACTTCAGACCTTGAACAAACT...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCAGAGTTTGGGCATGTaGGCCTATTCTGCCATCCTG +
Preference number: 2 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFQSLGM*AYSAIL
Trigger: CAGGATGGCAGAATAGGCTCACATGCCCAAACTCTG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTAATCCAAAACAGGAGTaGGGACAGAATAGAGTGAGT +
Preference number: 2 (lower is better)
Translates to: SKCKLELDTALLLTLHQTNPKQE*GQNRVS
Trigger: ACTCACTCTATTCTGTCCTCACTCCTGTTTTGGATT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGGTACAGAAAGGAGGGTaGATGCCCCCACCTCACCAC +
Preference number: 2 (lower is better)
Translates to: LLYFRTSMLICTEERTMEVQKGG*MPPPHH
Trigger: GTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTAC...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATCTGAACTATGCAAATaGACGATCTGTGTACAGAAG +
Preference number: 2 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGSELCK*TICVQK
Trigger: CTTCTGTACACAGATCGTGCATTTGCATAGTTCAGA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGGGAAAGCTGCTTGTTaGTTTTCACTTTTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGGKAAC*FSLLSS
Trigger: AGAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTCAGCAGATTTTACTCTaGCTGCTGCTTTGTATTCAC +
Preference number: 2 (lower is better)
Translates to: SKCKLELDTALLLTLHQTQQILL*LLLCIH
Trigger: GTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTG...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTATCACTTTTGAGTTCTTaGAATTCTGCTCTAAATGTC +
Preference number: 2 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLSLLSS*NSALNV
Trigger: GACATTTAGAGCAGAATTCCAAGAACTCAAAAGTGA...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGTGAGGAAAGCCCAATaGGTCTTAGCTAACAAGCTC +
Preference number: 2 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYVRKAQ*VLANKL
Trigger: GAGCTTGTTAGCTAAGACCCATTGGGCTTTCCTCAC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCAGACTGAGAGAGGGTaGCTGACAGGGCCATCTTTT +
Preference number: 2 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFQTERG*LTGPSF
Trigger: AAAAGATGGCCCTGTCAGCCACCCTCTCTCAGTCTG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACTAGTTTTGTCTTTTTaGCAAATAGGAGTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGLVLSF*QIGVPQ
Trigger: CTGAGGGACTCCTATTTGCCAAAAAGACAAAACTAG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 90 bp CCTCTGGTGACCAAAGCAAGTGTATCGCTTTGGGAAAGCTGCTTGTaGCTTTTCACTTTTGAGTTCTTGGAATTCTGCTCTAAATGTCTG +
Preference number: 2 (lower is better)
Translates to: PLVTKASVSLWESCL*LFTFEFLEFCSKCL
Trigger: CAGACATTTAGAGCAGAATTCCAAGAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCAAAGCGATACACTTGCTTTGGTCACCAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 90 bp CCTCCTCTGGTGACCAAAGCAAGTGTATCGCTTTGGGAAAGCTGCTaGTTGCTTTTCACTTTTGAGTTCTTGGAATTCTGCTCTAAATGT +
Preference number: 2 (lower is better)
Translates to: PPLVTKASVSLWESC*LLFTFEFLEFCSKC
Trigger: ACATTTAGAGCAGAATTCCAAGAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCAAAGCGATACACTTGCTTTGGTCACCAGAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGAATATCGTGCTCAAGTaGGAAACATCCACGCAAGTG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKNIVLK*ETSTQV
Trigger: CACTTGCGTGGATGTTTCTCACTTGAGCACGATATT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGGTGAAACCGTCCTTTaGGATATTTTACTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGGETVL*DILLFF
Trigger: GAAGAAAAGTAAAATATCTCAAAGGACGGTTTCACC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGGCCAAAACAGCAAATaGATATATATCAGTGCATCT +
Preference number: 2 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGGQNSK*IYISAS
Trigger: AGATGCACTGATATATATGCATTTGCTGTTTTGGCC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATATTCATGCACACGACTaGACACTCATGCTAACGAAC +
Preference number: 2 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYIHAHD*TLMLTN
Trigger: GTTCGTTAGCATGAGTGTCCAGTCGTGTGCATGAAT...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGAAGATGGCAATCCCCTaGAAGTCTCAGTCCTTAGAA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKKMAIP*KSQSLE
Trigger: TTCTAAGGACTGAGACTTCCAGGGGATTGCCATCTT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGGTGTTGTACTGCGCATaGATGATGGTGGCCTTGCCG +
Preference number: 2 (lower is better)
Translates to: LLYFRTSMLICTEERTMEVLYCA*MMVALP
Trigger: CGGCAAGGCCACCATCATCCATGCGCAGTACAACAC...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR TCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGACCCTGATCTACGGGTaGCTCATTCTAGGAGGGGAT +
Preference number: 2 (lower is better)
Translates to: LLYFRTSMLICTEERTMETLIYG*LILGGD
Trigger: ATCCCCTCCTAGAATGAGTCACCCGTAGATCAGGGT...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGATTTGGCTCCTAGTCTaGACTATGCAAATGCACGAT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKIWLLV*TMQMHD
Trigger: ATCGTGCATTTGCATAGTTCAGACTAGGAGCCAAAT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGAATCCAAAACAGGAGTaGGGACAGAATAGAGTGAGT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKNPKQE*GQNRVS
Trigger: ACTCACTCTATTCTGTCCTCACTCCTGTTTTGGATT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCTCACAGACACTGAGTaGACCACACTCAAAACTACC +
Preference number: 2 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFLTDTE*TTLKTT
Trigger: GGTAGTTTTGAGTGTGGTTCACTCAGTGTCTGTGAG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGGGAAAGCTGCTTGTTaGTTTTCACTTTTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQGKAAC*FSLLSS
Trigger: AGAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCACAGAAGAGAGAACTATaGAGCCAGCACACACGGTAC +
Preference number: 2 (lower is better)
Translates to: LYFRTSMLICTEERTMEPQKREL*SQHTRY
Trigger: GTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGTGAGGAAAGCCCAATaGGTCTTAGCTAACAAGCTC +
Preference number: 2 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFVRKAQ*VLANKL
Trigger: GAGCTTGTTAGCTAAGACCCATTGGGCTTTCCTCAC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGAGGACAGAATAGAGTaGGTTGGAAGAGAGCCTAAA +
Preference number: 2 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFEDRIE*VGREPK
Trigger: TTTAGGCTCTCTTCCAACTCACTCTATTCTGTCCTC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTAAGAACTCCGCAGAATaGTTCAGATTCTCCACAGCT +
Preference number: 2 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFKNSAE*FRFSTA
Trigger: AGCTGTGGAGAATCTGAAGCATTCTGCGGAGTTCTT...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGTTTTACTCTGCCTGCTaGTTTGTATTCACCTTCTCA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKFYSAC*FVFTFS
Trigger: TGAGAAGGTGAATACAAAGCAGCAGGCAGAGTAAAA...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCAGAAGAGAGAACTATaGAGCCAGCACACACGGTAC +
Preference number: 2 (lower is better)
Translates to: LLYFRTSMLICTEERTMEQKREL*SQHTRY
Trigger: GTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATACCACAGAGCAAAACTaGAAAAACCCAACTCTACTT +
Preference number: 2 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYTTEQN*KNPTLL
Trigger: AAGTAGAGTTGGGTTTTTCCAGTTTTGCTCTGTGGT...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 90 bp GTATCGCTTTGGGAAAGCTGCTTGTTGCTTTTCACTTTTGAGTTCTaGGAATTCTGCTCTAAATGTCTGAAGTACAATTCCAGTCTTGGA +
Preference number: 2 (lower is better)
Translates to: VSLWESCLLLFTFEF*EFCSKCLKYNSSLG
Trigger: TCCAAGACTGGAATTGTACTTCAGACATTTAGAGCAGAATTCCAAGAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCAAAGCGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 90 bp AATTCCAGTCTTGGATTAATAACTAGCTTGGTTTTGAGTCTTCATTaGGCTCCTAGTCTGAACTATGCAAATGCACGATCTGTGTACAGA +
Preference number: 2 (lower is better)
Translates to: NSSLGLITSLVLSLH*APSLNYANARSVYR
Trigger: TCTGTACACAGATCGTGCATTTGCATAGTTCAGACTAGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTATTAATCCAAGACTGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 90 bp TGTCTGAAGTACAATTCCAGTCTTGGATTAATAACTAGCTTGGTTTaGAGTCTTCATTTGGCTCCTAGTCTGAACTATGCAAATGCACGA +
Preference number: 2 (lower is better)
Translates to: CLKYNSSLGLITSLV*SLHLAPSLNYANAR
Trigger: TCGTGCATTTGCATAGTTCAGACTAGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTATTAATCCAAGACTGGAATTGTACTTCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR TCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCCAGCCCCTGATAATTaGATAGATAGTTTTTGGAGA +
Preference number: 2 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFPAPDN*IDSFWR
Trigger: TCTCCAAAAACTATCTATTCAATTATCAGGGGCTGG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 90 bp TCTAAATGTCTGAAGTACAATTCCAGTCTTGGATTAATAACTAGCTaGGTTTTGAGTCTTCATTTGGCTCCTAGTCTGAACTATGCAAAT +
Preference number: 2 (lower is better)
Translates to: SKCLKYNSSLGLITS*VLSLHLAPSLNYAN
Trigger: ATTTGCATAGTTCAGACTAGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTATTAATCCAAGACTGGAATTGTACTTCAGACATTTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CCA 72 bp GCCTTGCCGCCCAGCCCCTTCACCTCGATGGGCTTGTaGGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGG +
Preference number: 3 (lower is better)
Translates to: ALPPSPFTSMGL*VDRAESFRALG
Trigger: CCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGCTGGGCGGCAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CAA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACTGGATGATGGTGGCCTaGCCGCCCAGCCCCTTCACC +
Preference number: 3 (lower is better)
Translates to: AREPGSARDQPLPQTLIYWMMVA*PPSPFT
Trigger: GGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCA...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR TCA 72 bp GGGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTaGAGCGTTCCTGGTAGTCGGCGTTGGCTGGAGAGT +
Preference number: 3 (lower is better)
Translates to: GWTGPSPSGHWG*SVPGSRRWLES
Trigger: ACTCTCCAGCCAACGCCGACTACCAGGAACGCTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR GCA 72 bp TGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATaGCCCCACCTCACCACTGCCAGGAGGGGTCTCTGC +
Preference number: 3 (lower is better)
Translates to: WSQHTRYRKEGA*PHLTTARRGLC
Trigger: GCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGGTCACTGCCTTGGGCTaGGGCCTGCCCAGCGATGGC +
Preference number: 3 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQVTALG*GLPSDG
Trigger: GCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGAC...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CAA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGG +
Preference number: 3 (lower is better)
Translates to: AREPGSARDQPLPQTLIYQQSYT*SSITVG
Trigger: CCCCACGGTGATGCTTGACAATGTATAACTCTGCTG...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCGAGCGAGACTGCAGGTaGGAGGAACGGCGTGCCCAC +
Preference number: 3 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGERDCR*EERRAH
Trigger: GTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCTC...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR GCA 72 bp GCATCCTGGGAATACATGCTGATGGGCGTGTTGTACTaGGCATGGATGATGGTGGCCTTGCCGCCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: ASWEYMLMGVLY*AWMMVALPPSP
Trigger: GGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCATCAGCATGTATTCCCAGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR GCA 72 bp AGGCTCCCACTGAAGTCACTGCCTTGGGCTTGGGCCTaGCCAGCGATGGCATCCATGATGGCATCCTGGGAA +
Preference number: 3 (lower is better)
Translates to: RLPLKSLPWAWA*PAMASMMASWE
Trigger: TTCCCAGGATGCCATCATGGATGCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAGTGGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR GCA 72 bp GCGGAAGGAGCGAGACTGCAGGTTGGAGGAACGGCGTaGCCACTCGTCAGCCTCATCTTCTGGCTTGTTCTG +
Preference number: 3 (lower is better)
Translates to: AEGARLQVGGTA*PLVSLIFWLVL
Trigger: CAGAACAAGCCAGAAGATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCTCCTTCCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CAA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCC +
Preference number: 3 (lower is better)
Translates to: LLPLQRALFRAALSSRGQTEMLR*AIRGAP
Trigger: GGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGT...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCC +
Preference number: 3 (lower is better)
Translates to: LGLLLPLQRALFRAALSSTEMLR*AIRGAP
Trigger: GGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGT...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCC +
Preference number: 3 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISTEMLR*AIRGAP
Trigger: GGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGT...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR GCA 72 bp AGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTA +
Preference number: 3 (lower is better)
Translates to: SISSGVGRGQKC*GWPSEVPPAEL
Trigger: TAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CCA 72 bp TGGGAATACATGCTGATGGGCGTGTTGTACTGCGCATaGATGATGGTGGCCTTGCCGCCCAGCCCCTTCACC +
Preference number: 3 (lower is better)
Translates to: WEYMLMGVLYCA*MMVALPPSPFT
Trigger: GGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCATCAGCATGTATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CAA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCAACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCC +
Preference number: 3 (lower is better)
Translates to: NYGASTHGTERRVHAPTSTEMLR*AIRGAP
Trigger: GGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGT...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACGCCCATCCATTTCCCTaGGTTCTGGGGTGTTATGCC +
Preference number: 3 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHAHPFP*VLGCYA
Trigger: GGCATAACACCCCAGAACCAAGGGAAATGGATGGGC...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CCA 72 bp GAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTaGGGTGTTATGCCAGCAAACCCCTCCTGCCCTCTC +
Preference number: 3 (lower is better)
Translates to: ETEQRPIHFPWF*GVMPANPSCPL
Trigger: GAGAGGGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CCA 72 bp TGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTaGTTCTGGGGTGTTATGCCAGCAAACCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: WWETEQRPIHFP*FWGVMPANPSC
Trigger: GCAGGAGGGGTTTGCTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CCA 72 bp TGTCTGCAACCTGAGCCAGAGCCCTTCCTGGAGCCCTaGCAATTGCCCAGTGGCTCCCAGAAGACATCTCTT +
Preference number: 3 (lower is better)
Translates to: CLQPEPEPFLEP*QLPSGSQKTSL
Trigger: AAGAGATGTCTTCTGGGAGCCACTGGGCAATTGCCAGGGCTCCAGGAAGGGCTCTGGCTCAGGTTGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CCA 72 bp TGGGCCTGCCCAGCGATGGCATCCATGATGGCATCCTaGGAATACATGCTGATGGGCGTGTTGTACTGCGCA +
Preference number: 3 (lower is better)
Translates to: WACPAMASMMAS*EYMLMGVLYCA
Trigger: TGCGCAGTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGCTGGGCAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR CCA 72 bp TCCTTAATAGGGAGGCTCCCACTGAAGTCACTGCCTTaGGCTTGGGCCTGCCCAGCGATGGCATCCATGATG +
Preference number: 3 (lower is better)
Translates to: SLIGRLPLKSLP*AWACPAMASMM
Trigger: CATCATGGATGCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAGTGGGAGCCTCCCTATTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CAA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCGCCCATCCATTTCCCTaGGTTCTGGGGTGTTATGCC +
Preference number: 3 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGAHPFP*VLGCYA
Trigger: GGCATAACACCCCAGAACCAAGGGAAATGGATGGGC...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCTGGAGCCCTGGCAATaGCCCAGTGGCTCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: PPRVWACEPILPSCFRHCLEPWQ*PSGSQK
Trigger: CTTCTGGGAGCCACTGGGCAATTGCCAGGGCTCCAG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CCA 72 bp AGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTaGCCATCAGAGGTGCCCCCAGCAGAGTTATACATT +
Preference number: 3 (lower is better)
Translates to: SSGVGRGQKCCG*PSEVPPAELYI
Trigger: AATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGG +
Preference number: 3 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLQQSYT*SSITVG
Trigger: CCCCACGGTGATGCTTGACAATGTATAACTCTGCTG...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCATGCTGATGGGCGTGTaGTACTGCGCATGGATGATG +
Preference number: 3 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCMLMGV*YCAWMM
Trigger: CATCATCCATGCGCAGTACAACACGCCCATCAGCAT...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CAA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGG +
Preference number: 3 (lower is better)
Translates to: TTARRGLCLITLGLLLPLQQSYT*SSITVG
Trigger: CCCCACGGTGATGCTTGACAATGTATAACTCTGCTG...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR TCA 72 bp GGGGATGTTGGATGTTTCAGACTGAGAGAGGGTGGCTaGCAGGGCCATCTTTTCTCAGCTGTCTGCAACCTG +
Preference number: 3 (lower is better)
Translates to: GDVGCFRLREGG*QGHLFSAVCNL
Trigger: CAGGTTGCAGACAGCTGAGAAAAGATGGCCCTGTCAGCCACCCTCTCTCAGTCTGAAACATCCAACATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR GCA 72 bp GCAGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACATTGTCAAGCATCACC +
Preference number: 3 (lower is better)
Translates to: AEDRNAAVGHQR*PQQSYTLSSIT
Trigger: GGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCAGCCTCCCGAATCCTTaGTTGCCAGCAGCAGGAGCA +
Preference number: 3 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFSLPNP*LPAAGA
Trigger: TGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGGCCACCAAGCCTATTaGAGATGGAGGGTACTGGGG +
Preference number: 3 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFGHQAY*RWRVLG
Trigger: CCCCAGTACCCTCCATCTCAAATAGGCTTGGTGGCC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCTTTCAAACCTTTCCCTaGACCTTCGCAGAGCTTCTT +
Preference number: 3 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLFQTFP*TFAELL
Trigger: AAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAAA...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGGCCACCAAGCCTATTaGAGATGGAGGGTACTGGGG +
Preference number: 3 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGGHQAY*RWRVLG
Trigger: CCCCAGTACCCTCCATCTCAAATAGGCTTGGTGGCC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTAGCCTCCCGAATCCTTaGTTGCCAGCAGCAGGAGCA +
Preference number: 3 (lower is better)
Translates to: SKCKLELDTALLLTLHQTSLPNP*LPAAGA
Trigger: TGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAGTTTGGCACTTCAATTaGTTTGCCAGGGGAGCGCTT +
Preference number: 3 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLVWHFN*FARGAL
Trigger: AAGCGCTCCCCTGGCAAACAAATTGAAGTGCCAAAC...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CCA 72 bp TTTGGGCTGAAAGGCCATGGTGCCAGTTGCGCAATTTaGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACC +
Preference number: 3 (lower is better)
Translates to: FGLKGHGASCAI*QNVGCYVPFQT
Trigger: GGTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAACTCCCGAATCCTTTGTaGCCAGCAGCAGGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQLPNPL*PAAGAA
Trigger: AGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAG...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGGCACTTCAATTTGTTaGCCAGGGGAGCGCTTAAGA +
Preference number: 3 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFGTSIC*PGERLR
Trigger: TCTTAAGCGCTCCCCTGGCAAACAAATTGAAGTGCC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGTTTGGCACTTCAATTaGTTTGCCAGGGGAGCGCTT +
Preference number: 3 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFVWHFN*FARGAL
Trigger: AAGCGCTCCCCTGGCAAACAAATTGAAGTGCCAAAC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR TCA 72 bp CGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGGTCTaGAGTCTGATGCGCAGAGGTAGCTCCATGACGCTA +
Preference number: 3 (lower is better)
Translates to: RAPKKVLSLFKV*SLMRRGSSMTL
Trigger: TAGCGTCATGGAGCTACCTCTGCGCATCAGACTTCAGACCTTGAACAAACTTAAAACCTTCTTGGGAGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR TCA 72 bp GTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTaGGCCTATTCTGCCATCCTGTTTCAGACACTGTCT +
Preference number: 3 (lower is better)
Translates to: VSFLFPTQSLGM*AYSAILFQTLS
Trigger: AGACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCTCCCGAATCCTTTGTaGCCAGCAGCAGGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYLPNPL*PAAGAA
Trigger: AGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGCCAGAAGACATCTCTTaGGACGTCCGGGCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKPEDIS*DVRAPK
Trigger: CTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCTGG...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCTGGAGCCCTGGCAATaGCCCAGTGGCTCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFLEPWQ*PSGSQK
Trigger: CTTCTGGGAGCCACTGGGCAATTGCCAGGGCTCCAG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAAGCAAGTGTATCGCTTaGGGAAAGCTGCTTGTTGCT +
Preference number: 3 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGSKCIA*GKLLVA
Trigger: AGCAACAAGCAGCTTTCCCAAAGCGATACACTTGCT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATGCAGCGAGTGCTGTTaGGCACTTCAATTTGTTTGC +
Preference number: 3 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGCSECC*ALQFVC
Trigger: GCAAACAAATTGAAGTGCCAAACAGCACTCGCTGCA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAACTCTGCCTGCTGCTTaGTATTCACCTTCTCACAGA +
Preference number: 3 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGTLPAA*YSPSHR
Trigger: TCTGTGAGAAGGTGAATACAAAGCAGCAGGCAGAGT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGG +
Preference number: 3 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEQQSYT*SSITVG
Trigger: CCCCACGGTGATGCTTGACAATGTATAACTCTGCTG...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGTTTTGAGTCTTCATTaGGCTCCTAGTCTGAACTAT +
Preference number: 3 (lower is better)
Translates to: PPRVWACEPILPSCFRHCVLSLH*APSLNY
Trigger: ATAGTTCAGACTAGGAGCCAAATGAAGACTCAAAAC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAATAACTAGCTTGGTTTaGAGTCTTCATTTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLITSLV*SLHLAP
Trigger: AGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTAT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCTTTGGGAAAGCTGCTaGTTGCTTTTCACTTTTGAG +
Preference number: 3 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFLWESC*LLFTFE
Trigger: CTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCAAAG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTAGCAAGTGTATCGCTTaGGGAAAGCTGCTTGTTGCT +
Preference number: 3 (lower is better)
Translates to: SKCKLELDTALLLTLHQTSKCIA*GKLLVA
Trigger: AGCAACAAGCAGCTTTCCCAAAGCGATACACTTGCT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGGCACTTCAATTTGTTaGCCAGGGGAGCGCTTAAGA +
Preference number: 3 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQGTSIC*PGERLR
Trigger: TCTTAAGCGCTCCCCTGGCAAACAAATTGAAGTGCC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCCAGAAGACATCTCTTaGGACGTCCGGGCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFPEDIS*DVRAPK
Trigger: CTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCTGG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR TCA 72 bp AGTGAGTTGGAAGAGAGCCTAAATATCGTGCTCAAGTaGGAAACATCCACGCAAGTGCCTGCTTCAATGCCA +
Preference number: 3 (lower is better)
Translates to: SELEESLNIVLK*ETSTQVPASMP
Trigger: TGGCATTGAAGCAGGCACTTGCGTGGATGTTTCTCACTTGAGCACGATATTTAGGCTCTCTTCCAACTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGTTTTGAGTCTTCATTaGGCTCCTAGTCTGAACTAT +
Preference number: 3 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFVLSLH*APSLNY
Trigger: ATAGTTCAGACTAGGAGCCAAATGAAGACTCAAAAC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAATGCAGCGAGTGCTGTTaGGCACTTCAATTTGTTTGC +
Preference number: 3 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQCSECC*ALQFVC
Trigger: GCAAACAAATTGAAGTGCCAAACAGCACTCGCTGCA...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACAGCAGTTAACACAATaGTACAAACTCAGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGQQLTQ*YKLSVL
Trigger: CAGCACACTGAGTTTGTACAATTGTGTTAACTGCTG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CCA 72 bp TGTCCTCCTCTGGTGACCAAAGCAAGTGTATCGCTTTaGGAAAGCTGCTTGTTGCTTTTCACTTTTGAGTTC +
Preference number: 3 (lower is better)
Translates to: CPPLVTKASVSL*ESCLLLFTFEF
Trigger: GAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCAAAGCGATACACTTGCTTTGGTCACCAGAGGAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTCAGCAGTTAACACAATaGTACAAACTCAGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: SKCKLELDTALLLTLHQTQQLTQ*YKLSVL
Trigger: CAGCACACTGAGTTTGTACAATTGTGTTAACTGCTG...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR GCA 72 bp TCAAGTGAGAAACATCCACGCAAGTGCCTGCTTCAATaGCATGTTTTCAATGAGCATATTAACAGGGCTTCC +
Preference number: 3 (lower is better)
Translates to: SSEKHPRKCLLQ*HVFNEHINRAS
Trigger: GGAAGCCCTGTTAATATGCTCATTGAAAACATGGCATTGAAGCAGGCACTTGCGTGGATGTTTCTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CCA 72 bp CCTCATGGAGAAGAGACAGGTAAGATGGCAATCCCCTaGAAGTCTCAGTCCTTAGAAGAAAAGAGTTCTAAT +
Preference number: 3 (lower is better)
Translates to: PHGEETGKMAIP*KSQSLEEKSSN
Trigger: ATTAGAACTCTTTTCTTCTAAGGACTGAGACTTCCAGGGGATTGCCATCTTACCTGTCTCTTCTCCATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAACTTTGGGAAAGCTGCTaGTTGCTTTTCACTTTTGAG +
Preference number: 3 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQLWESC*LLFTFE
Trigger: CTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCAAAG...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR GCA 72 bp AGAGCCTGTCAGTACAGTCAGCAACCTCCTTGTCCCTaGATATTTGAACTTTCCAAAAATAACAGAATGCTC +
Preference number: 3 (lower is better)
Translates to: RACQYSQQPPCP*IFELSKNNRML
Trigger: GAGCATTCTGTTATTTTTGGAAAGTTCAAATATGCAGGGACAAGGAGGTTGCTGACTGTACTGACAGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGTGGGAAAGCTGCTTGTaGCTTTTCACTTTTGAGTTC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKWESCL*LFTFEF
Trigger: GAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCA...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR GCA 72 bp TATCGTGCTCAAGTGAGAAACATCCACGCAAGTGCCTaGTTCAATGCCATGTTTTCAATGAGCATATTAACA +
Preference number: 3 (lower is better)
Translates to: YRAQVRNIHASA*FNAMFSMSILT
Trigger: TGTTAATATGCTCATTGAAAACATGGCATTGAAGCAGGCACTTGCGTGGATGTTTCTCACTTGAGCACGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR GCA 72 bp TTGTTCGACTGTGATGTATCGAGGCATCATGGTGTTTaGCAGCTTTTAAAAATGATCAGGATGTCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: LFDCDVSRHHGV*QLLKMIRMSES
Trigger: GCTTTCTGACATCCTGATCATTTTTAAAAGCTGGCAAACACCATGATGCCTCGATACATCACAGTCGAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477489.1
3UTR-3UTR CAA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGG +
Preference number: 3 (lower is better)
Translates to: LLYFRTSMLICTEERTMEQQSYT*SSITVG
Trigger: CCCCACGGTGATGCTTGACAATGTATAACTCTGCTG...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR-3UTR CAA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTATAACTAGCTTGGTTTaGAGTCTTCATTTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFITSLV*SLHLAP
Trigger: AGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTAT...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACAGAGCTGCAGGGGGCTaGGCCCCAGCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYRAAGG*APASAL
Trigger: CAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCT...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp TCGATGGGCTTGTGGGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTGAAGGCGGGGTCCTTCTGGTaGGGGATCACCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SMGLWVDRAESFRALGLKAGSFW*GITGRG
Trigger: CCCTCTGCCGGTGATCCCTCACCAGAAGGACCCCGC...CTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR GCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACGTTGGAGGAACGGCGTaGCCACTCGTCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYVGGTA*PLVSLI
Trigger: GATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAAC...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGTGGTGGGTACAGAGCTaGAGGGGGCTGGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GASTHGTERRVHAPTSPLWWVQS*RGLGPS
Trigger: GCTGGGGCCCAGCCCCCTGCAGCTCTGTACCCACCA...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACGCCAGGAGGGGTCTCTaGCTCATTACCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYARRGL*LITLGL
Trigger: AAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGC...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACAGAAAGGAGGGTGCATaGCCCCACCTCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYRKEGA*PHLTTA
Trigger: GGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCT...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACTCTGTCCCCGTCATCTaGGCCAGGATGCGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYSVPVI*ARMRKE
Trigger: CTCCTTCCGCATCCTGGCCCAGATGACGGGGACAGA...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCCCCCCTGGCAAGTGGTaGCACCTGAGGACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVPPGKW*HLRTRW
Trigger: CCAGCGGGTCCTCAGGTGCCACCACTTGCCAGGGGG...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACGATGAGGCCAGGAGCTaGGGATGGTGGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYDEARS*GWWETE
Trigger: CTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCATC...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCCCCCGGGGCAGGGTCTaGTTGCTGATGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVPRGRV*LLMEVV
Trigger: CACCACCTCCATCAGCAAGCAGACCCTGCCCCGGGG...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGTCACTGCCTTGGGCTTaGGCCTGCCCAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLSLPWA*ACPAMA
Trigger: TGCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGA...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCCTCGCCTCAGGGCTaGGGCTGGGTGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSPSPQG*GWVPPG
Trigger: GCCTGGTGGCACCCAGCCCCAGCCCTGAGGCGAGGG...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGCCCTCGCCTCAGGGCTaGGGCTGGGTGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SSITVGLTCQICVGVRMEPSPQG*GWVPPG
Trigger: GCCTGGTGGCACCCAGCCCCAGCCCTGAGGCGAGGG...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCAGCTGTGGCCAGGGGTaGCGAAGCCGCACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVSCGQG*RSRTGR
Trigger: TCTCCCAGTGCGGCTTCGCCACCCCTGGCCACAGCT...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR TCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACGAGGTCACCCTGGCTaGGCTGGGACTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: YGASTHGTERRVHAPTSPRGHPG*AGTGLP
Trigger: AGGCAGCCCAGTCCCAGCTCAGCCAGGGTGACCTCG...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACCCTGGGAATACATGCTaGTGGGCGTGTTGTACTGCG +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYPGNTC*WACCTA
Trigger: CGCAGTACAACACGCCCATCAGCATGTATTCCCAGG...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR GCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCAGCTGCCCAGCCGGGCTaGGTGGAGCTCTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: YGASTHGTERRVHAPTSPAAQPG*VELLRG
Trigger: GCCTCTCAAGAGCTCCACGCAGCCCGGCTGGGCAGC...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263066.11
CDS-3UTR GCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCTCTGTTCTGTCCCTTaGTGCCCAGCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GASTHGTERRVHAPTSPLLCSVP*CPAGLR
Trigger: ACGCAGCCCGGCTGGGCAGCAAGGGACAGAACAGAG...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263066.11
CDS-3UTR GCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCCTCTGTTCTGTCCCTTaGTGCCCAGCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVLCSVP*CPAGLR
Trigger: ACGCAGCCCGGCTGGGCAGCAAGGGACAGAACAGAG...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGGTTGGAGGAACGGCGTaGCCACTCGTCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLVGGTA*PLVSLI
Trigger: GATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAAC...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGAGGGCTGGGGCTGGGTaGCACCAGGCTGCCGTTCGT +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQRAGAG*HQAAVR
Trigger: ACGAACGGCAGCCTGGTGGCACCCAGCCCCAGCCCT...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCAGGGCTGGGGCTGGGTaGCACCAGGCTGCCGTTCGT +
Preference number: 4 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLRAGAG*HQAAVR
Trigger: ACGAACGGCAGCCTGGTGGCACCCAGCCCCAGCCCT...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACATGGGGTTGTTATATTaGCTCGGCTGGCTCGAGCCC +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYMGLLY*LGWLEP
Trigger: GGGCTCGAGCCAGCCGAGGCAATATAACAACCCCAT...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTGAAGCGTTCCTGGTAGTCACCTCGATGGGCTTGTaGGTGGACAGGGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGQGRVLQGTGVEAFLVVTSMGL*VDRAES
Trigger: GGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGT...GACTACCAGGAACGCTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCCCCTCGCCTCAGGGCTaGGGCTGGGTGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSPSPQG*GWVPPG
Trigger: GCCTGGTGGCACCCAGCCCCAGCCCTGAGGCGAGGG...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp CCCAGCGATGGCATCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTCCCTCGCCTCAGGGCTaGGGCTGGGTGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PSDGIHDGILGIHADGRVPSPQG*GWVPPG
Trigger: GCCTGGTGGCACCCAGCCCCAGCCCTGAGGCGAGGG...AACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTTCTTGGCCCTCAGGCTaGCCCGCGGAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TTARRGLCLITLGLLLPLSWPSG*PAEGQG
Trigger: ACCCTGGCCCTCCGCGGGCCAGCCTGAGGGCCAAGA...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACTCTTGGCCCTCAGGCTaGCCCGCGGAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RELWSQHTRYRKEGACPHSWPSG*PAEGQG
Trigger: ACCCTGGCCCTCCGCGGGCCAGCCTGAGGGCCAAGA...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTGTCCCGGGCCCCCTCTaGGCTGGTCTTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TTARRGLCLITLGLLLPLVPGPL*AGLGPQ
Trigger: CTGAGGGCCAAGACCAGCCCAGAGGGGGCCCGGGAC...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGTTATATTGCCTCGGCTaGCTCGAGCCCGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLLYCLG*LEPGRA
Trigger: AGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAA...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCGAGGTCACCCTGGCTaGGCTGGGACTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCRGHPG*AGTGLP
Trigger: AGGCAGCCCAGTCCCAGCTCAGCCAGGGTGACCTCG...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCAGAGGCCTCGGCGAGTaGGGAGAAGGCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSRGLGE*GEGGGP
Trigger: CGGCCCTCCGCCTTCTCCTCACTCGCCGAGGCCTCT...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR TCA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACAAGAGGCCTCGGCGAGTaGGGAGAAGGCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTRGLGE*GEGGGP
Trigger: CGGCCCTCCGCCTTCTCCTCACTCGCCGAGGCCTCT...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCAGAGGCCTGGGGCCTTaGCCTTCGCAGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVRGLGP*PSQSFF
Trigger: GAAGAAGCTCTGCGAAGGTCAAGGCCCCAGGCCTCT...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR GCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCGTTGGAGGAACGGCGTaGCCACTCGTCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVVGGTA*PLVSLI
Trigger: GATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAAC...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCAGTTGGAGGAACGGCGTaGCCACTCGTCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPVGGTA*PLVSLI
Trigger: GATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAAC...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYRGQKC*GWPSEV
Trigger: CACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACTGGTGGGTACAGAGCTaGAGGGGGCTGGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RELWSQHTRYRKEGACPHWWVQS*RGLGPS
Trigger: GCTGGGGCCCAGCCCCCTGCAGCTCTGTACCCACCA...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCTGGTGGGTACAGAGCTaGAGGGGGCTGGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCWWVQS*RGLGPS
Trigger: GCTGGGGCCCAGCCCCCTGCAGCTCTGTACCCACCA...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTGAAGCGTTCCTGGTAGTCGCCAGGAGGGGTCTCTaGCTCATTACCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GGQGRVLQGTGVEAFLVVARRGL*LITLGL
Trigger: AAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGC...GACTACCAGGAACGCTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp ATGGGCGTGTTGTACTGCGCATGGATGATGGTGGCCTTGCCGCCCAGCCCCTTCCAGAGGGCAGGGGATTaGGCTACGGGCTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: MGVLYCAWMMVALPPSPFQRAGD*ATGYLG
Trigger: CCCCAAATAGCCCGTAGCCCAATCCCCTGCCCTCTG...GAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACAGTCCCGGGCCCCCTCTaGGCTGGTCTTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTVPGPL*AGLGPQ
Trigger: CTGAGGGCCAAGACCAGCCCAGAGGGGGCCCGGGAC...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCAATCGCTCAGCCCTCTaGACGGTCCCCCTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVNRSAL*TVPLAS
Trigger: ACTTGCCAGGGGGACCGTCCAGAGGGCTGAGCGATT...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTGTAGTCGGCGCCTCCTaGGAGTCCGACACCCGAGGC +
Preference number: 4 (lower is better)
Translates to: TTARRGLCLITLGLLLPLVVGAS*ESDTRG
Trigger: GCCTCGGGTGTCGGACTCCCAGGAGGCGCCGACTAC...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372056.8
3UTR CAA 72 bp ATGGGCGTGTTGTACTGCGCATGGATGATGGTGGCCTaGCCGCCCAGCCCCTTCACCTCGATGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: MGVLYCAWMMVA*PPSPFTSMGLW
Trigger: CCACAAGCCCATCGAGGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAACGAGGTCACCCTGGCTaGGCTGGGACTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKRGHPG*AGTGLP
Trigger: AGGCAGCCCAGTCCCAGCTCAGCCAGGGTGACCTCG...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGTCATGGTGTCTGTGTTaGCGCCGTCAATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLSWCLC*RRQWPP
Trigger: TGGTGGCCATTGACGGCGTCAACACAGACACCATGA...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp CTTAATCACAGCCTGGTAGACGGGAGAGGCGCTGTCTACGGCAAGGTCCTTAATAGAGGCCTCGGCGAGTaGGGAGAAGGCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LNHSLVDGRGAVYGKVLNRGLGE*GEGGGP
Trigger: CGGCCCTCCGCCTTCTCCTCACTCGCCGAGGCCTCT...ATTAAGGACCTTGCCGTAGACAGCGCCTCTCCCGTCTACCAGGCTGTGATTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGCTCATCTGGTACATCTaGGCCATCTCCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLLIWYI*AISLRV
Trigger: GACCCTGAGGGAGATGGCTCAGATGTACCAGATGAG...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTGTTCTGTCCCTTGCTaGCCAGCCGGGCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTCSVPC*PAGLRG
Trigger: TCCACGCAGCCCGGCTGGGCAGCAAGGGACAGAACA...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263066.11
CDS-3UTR GCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGATGGGCGTGTTGTACTaGGCATGGATGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLMGVLY*AWMMVA
Trigger: GGCCACCATCATCCATGCGCAGTACAACACGCCCAT...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR GCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGCCTTGGGCTTGGGCCTaGCCAGCGATGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQPWAWA*PAMASM
Trigger: CATGGATGCCATCGCTGGGCAGGCCCAAGCCCAAGG...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR GCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGCCCCCACCTCACCACTaGCAGGAGGGGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQPPPHH*QEGSLP
Trigger: AGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGG...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCCCCACCTCACCACTaGCAGGAGGGGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPPPPHH*QEGSLP
Trigger: AGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGG...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGGTACAGAAAGGAGGGTaGATGCCCCCACCTCACCAC +
Preference number: 4 (lower is better)
Translates to: GASTHGTERRVHAPTSPLVQKGG*MPPPHH
Trigger: GTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTAC...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCACCGGCAGAGGGGTCTaGACTGGAGGTGCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: LGLLLPLQRALFRAALSSTGRGV*TGGAVV
Trigger: CACGACAGCACCTCCAGTCCAGACCCCTCTGCCGGT...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCACCGGCAGAGGGGTCTaGACTGGAGGTGCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISTGRGV*TGGAVV
Trigger: CACGACAGCACCTCCAGTCCAGACCCCTCTGCCGGT...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGACCGGCAGAGGGGTCTaGACTGGAGGTGCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQTGRGV*TGGAVV
Trigger: CACGACAGCACCTCCAGTCCAGACCCCTCTGCCGGT...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAACCTCGATGGGCTTGTaGGTGGACAGGGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGTSMGL*VDRAES
Trigger: GGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGT...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCAGCCCCTTCACCTCGATaGGCTTGTGGGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: YGASTHGTERRVHAPTSPAPSPR*ACGWTG
Trigger: CCCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGC...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCTCACTGCCTTGGGCTTaGGCCTGCCCAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISSLPWA*ACPAMA
Trigger: TGCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGA...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCTGAAGTCACTGCCTTaGGCTTGGGCCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHLKSLP*AWACPA
Trigger: CGCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAG...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACGCCAGTTGCGCAATTTaGCAAAACGTGGGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYASCAI*QNVGCY
Trigger: GTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGC...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCAGAAATGCTGCGGTTaGCCATCAGAGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GASTHGTERRVHAPTSPLQKCCG*PSEVPP
Trigger: TGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTG...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGAGAGCTGCAGGGGGCTaGGCCCCAGCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQRAAGG*APASAL
Trigger: CAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCT...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTGGGCTACGGGCTATTTaGGGGGTGGCGAGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: TTARRGLCLITLGLLLPLGLRAI*GVARVA
Trigger: GGCAACCCTCGCCACCCCCCAAATAGCCCGTAGCCC...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATTCTTGGCCCTCAGGCTaGCCCGCGGAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: CCGWPSEVPPAELYIVKHSWPSG*PAEGQG
Trigger: ACCCTGGCCCTCCGCGGGCCAGCCTGAGGGCCAAGA...ATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGGTCCCGGGCCCCCTCTaGGCTGGTCTTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VIHCQASPWGSHARSVWGVPGPL*AGLGPQ
Trigger: CTGAGGGCCAAGACCAGCCCAGAGGGGGCCCGGGAC...CCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGTCATGGTGTCTGTGTTaGCGCCGTCAATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GASTHGTERRVHAPTSPLSWCLC*RRQWPP
Trigger: TGGTGGCCATTGACGGCGTCAACACAGACACCATGA...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAACTACCACCTTCTGGTaGGGGATCACCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGTTTFW*GITGRG
Trigger: CCCTCTGCCGGTGATCCCTCACCAGAAGGTGGTAGT...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR TCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTCAGGGCACTGGGGTTaGAGCGTTCCTGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLSGHWG*SVPGSR
Trigger: CCGACTACCAGGAACGCTTCAACCCCAGTGCCCTGA...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGCAGCGATGGCATCCATaGTGGCATCCTGGGAATACA +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLQRWHP*WHPGNT
Trigger: TGTATTCCCAGGATGCCATCATGGATGCCATCGCTG...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp TTCACCTCGATGGGCTTGTGGGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGCAGCGATGGCATCCATaGTGGCATCCTGGGAATACA +
Preference number: 4 (lower is better)
Translates to: FTSMGLWVDRAESFRALGQRWHP*WHPGNT
Trigger: TGTATTCCCAGGATGCCATCATGGATGCCATCGCTG...CCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp ATGGGCGTGTTGTACTGCGCATGGATGATGGTGGCCTTGCCGCCCAGCCCCTTCAGGATGGTGGGAAACTaGGCAGCGGCCCATCCATTT +
Preference number: 4 (lower is better)
Translates to: MGVLYCAWMMVALPPSPFRMVGN*AAAHPF
Trigger: AAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCT...GAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCCTGAGAGAGGGTGGCTaGCAGGGCCATCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVLREGG*QGHLFS
Trigger: TGAGAAAAGATGGCCCTGTCAGCCACCCTCTCTCAG...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGGGTCTGGACTGGAGGTaGTGTCGTGGAGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: GASTHGTERRVHAPTSPLGLDWR*CRGDGN
Trigger: ATTCCCATCTCCACGACAGCACCTCCAGTCCAGACC...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp ATGGGCGTGTTGTACTGCGCATGGATGATGGTGGCCTTGCCGCCCAGCCCCTTCGGTCTGGACTGGAGGTaGTGTCGTGGAGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: MGVLYCAWMMVALPPSPFGLDWR*CRGDGN
Trigger: ATTCCCATCTCCACGACAGCACCTCCAGTCCAGACC...GAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR GCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACA +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLVGHQR*PQQSYT
Trigger: TGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCGCCAGGAGGGGTCTCTaGCTCATTACCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISARRGL*LITLGL
Trigger: AAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGC...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAAGAAAGGAGGGTGCATaGCCCCACCTCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGRKEGA*PHLTTA
Trigger: GGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCT...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACAGAAAGGAGGGTGCATaGCCCCACCTCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHRKEGA*PHLTTA
Trigger: GGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCT...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCAGGGCTGGGGCTGGGTaGCACCAGGCTGCCGTTCGT +
Preference number: 4 (lower is better)
Translates to: PQQSYTLSSITVGLTCQIRAGAG*HQAAVR
Trigger: ACGAACGGCAGCCTGGTGGCACCCAGCCCCAGCCCT...GATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACTCGTGGAGATGGGAATaGGACGCTTTGATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AREPGSARDQPLPQTLIYSWRWE*DALISA
Trigger: TGCAGAAATCAAAGCGTCCCATTCCCATCTCCACGA...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGCGATGGGCTTGTGGGTaGACAGGGCCGAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQRWACG*TGPSPS
Trigger: TGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCG...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGACCTCGATGGGCTTGTaGGTGGACAGGGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQTSMGL*VDRAES
Trigger: GGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGT...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCGTGTTGTACTGCGCATaGATGATGGTGGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVVLYCA*MMVALP
Trigger: CGGCAAGGCCACCATCATCCATGCGCAGTACAACAC...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCTGAAGTCACTGCCTTaGGCTTGGGCCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCLKSLP*AWACPA
Trigger: CGCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAG...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp GAGGCGCTGTCTACGGCAAGGTCCTTAATAGGGAGGCTCCCACTGAAGTCACTGCTGAAGTCACTGCCTTaGGCTTGGGCCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: EALSTARSLIGRLPLKSLLKSLP*AWACPA
Trigger: CGCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAG...CAGTGACTTCAGTGGGAGCCTCCCTATTAAGGACCTTGCCGTAGACAGCGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACAGCGAGACTGCAGGTTaGAGGAACGGCGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHSETAG*RNGVPT
Trigger: AGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCT...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CGAGACTGCAGGTTGGAGGAACGGCGTGCCCACTCGTCAGCCTCATCTTCTGGCGCATCAGCTCTGGGGTaGGCAGAGGACAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: RDCRLEERRAHSSASSSGASALG*AEDRNA
Trigger: AGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGC...GCCAGAAGATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAAAGAGCTGCAGGGGGCTaGGCCCCAGCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKRAAGG*APASAL
Trigger: CAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCT...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CCCAGCGATGGCATCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTAGAGCTGCAGGGGGCTaGGCCCCAGCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSDGIHDGILGIHADGRVRAAGG*APASAL
Trigger: CAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCT...AACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTGGCGAGGGTTGCCCTaGGGAGGTTTGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLWRGLP*GGLVGT
Trigger: TGTACCCACCAAACCTCCCCAGGGCAACCCTCGCCA...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGACAGAGGGCAGGGGATTaGGCTACGGGCTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGQRAGD*ATGYLG
Trigger: CCCCAAATAGCCCGTAGCCCAATCCCCTGCCCTCTG...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTATCTTGGCCCTCAGGCTaGCCCGCGGAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLSWPSG*PAEGQG
Trigger: ACCCTGGCCCTCCGCGGGCCAGCCTGAGGGCCAAGA...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAGTCCCGGGCCCCCTCTaGGCTGGTCTTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLVPGPL*AGLGPQ
Trigger: CTGAGGGCCAAGACCAGCCCAGAGGGGGCCCGGGAC...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCTTATATTGCCTCGGCTaGCTCGAGCCCGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLLYCLG*LEPGRA
Trigger: AGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAA...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCGTGGAGTCCGGCTGCTaGCTGGGAATCGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSVESGC*LGIAQP
Trigger: GGGCTGAGCGATTCCCAGCCAGCAGCCGGACTCCAC...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCTCAGGGCACTGGGGTTaGAGCGTTCCTGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCSGHWG*SVPGSR
Trigger: CCGACTACCAGGAACGCTTCAACCCCAGTGCCCTGA...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCATCAGGGCACTGGGGTTaGAGCGTTCCTGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSSGHWG*SVPGSR
Trigger: CCGACTACCAGGAACGCTTCAACCCCAGTGCCCTGA...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGGATGAGGCCAGGAGCTaGGGATGGTGGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQDEARS*GWWETE
Trigger: CTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCATC...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAGCGGGGTCCTTCTGGTaGGGGATCACCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLAGSFW*GITGRG
Trigger: CCCTCTGCCGGTGATCCCTCACCAGAAGGACCCCGC...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR TCA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGAGAGGCCTCGGCGAGTaGGGAGAAGGCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SRVIHCQASPWGSHARSVRGLGE*GEGGGP
Trigger: CGGCCCTCCGCCTTCTCCTCACTCGCCGAGGCCTCT...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCCGTTGGCTGGAGAGTTaGCTACCACCCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGRWLES*LPPSWE
Trigger: CTCCCAGGAGGGTGGTAGTCAACTCTCCAGCCAACG...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR GCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGATGTAAGACATGCTGGTaGTGTCAGCGGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGCKTCW*CQRPPL
Trigger: CAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACA...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR GCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGGGACGCTTTGATTTCTaGAGGGTGAGGCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLGRFDF*RVRLKL
Trigger: CAACTTGAGCCTCACCCTGCAGAAATCAAAGCGTCC...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACCCTTGGGCTTGGGCCTaGCCAGCGATGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYPWAWA*PAMASM
Trigger: CATGGATGCCATCGCTGGGCAGGCCCAAGCCCAAGG...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR GCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCAGTTGGAGGAACGGCGTaGCCACTCGTCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSVGGTA*PLVSLI
Trigger: GATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAAC...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCACCGTGGGGCTCACATaGCAGATCTGTGTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLTVGLT*QICVGV
Trigger: TACCCCCACACAGATCTGGCATGTGAGCCCCACGGT...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAATGGTGGGTACAGAGCTaGAGGGGGCTGGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQWWVQS*RGLGPS
Trigger: GCTGGGGCCCAGCCCCCTGCAGCTCTGTACCCACCA...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCCAGCAAACCCCTCCTaGCCTCTCTGGTCTACAGCT +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISPANPS*PLWSTA
Trigger: AGCTGTAGACCAGAGAGGGCAGGAGGGGTTTGCTGG...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGGGTTCTGGGGTGTTATaGCAGCAAACCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQGSGVL*QQTPPA
Trigger: GGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACC...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGAGAAAGGAGGGTGCATaGCCCCACCTCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQRKEGA*PHLTTA
Trigger: GGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCT...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCGTACAGAAAGGAGGGTaGATGCCCCCACCTCACCAC +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISVQKGG*MPPPHH
Trigger: GTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTAC...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GCAGGTTGGAGGAACGGCGTGCCCACTCGTCAGCCTCATCTTCTGGCTTGTTCTGTACAGAAAGGAGGGTaGATGCCCCCACCTCACCAC +
Preference number: 4 (lower is better)
Translates to: AGWRNGVPTRQPHLLACSVQKGG*MPPPHH
Trigger: GTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTAC...AGAACAAGCCAGAAGATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR GCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCTCCCTCAGGGTCTCTaGCGAGTACAGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: TTARRGLCLITLGLLLPLLPQGL*RVQANG
Trigger: CCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAG...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCAGTCAGCGGCCGCCTCTaGAGACAAAGGGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSVSGRL*RQRVER
Trigger: CCTCTCTACCCTTTGTCTGCAGAGGCGGCCGCTGAC...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372066.8
CDS-3UTR CCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCCACTGTAAGACATGCTaGTGCTGTCAGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTHCKTC*CCQRPP
Trigger: AGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTG...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR CCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACACTGTAAGACATGCTaGTGCTGTCAGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: YGASTHGTERRVHAPTSPHCKTC*CCQRPP
Trigger: AGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTG...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR CCA 90 bp GGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTGAAGCGTTCCTGGTAGTCTTCTGGGCTTCCAGGTaGGTCATGGTGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: GGQGRVLQGTGVEAFLVVFWASR*VMVSVL
Trigger: CAACACAGACACCATGACCCACCTGGAAGCCCAGAA...GACTACCAGGAACGCTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCAGAGGGGTCTGGACTaGAGGTGCTGTCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHQRGLD*RCCRGD
Trigger: ATCTCCACGACAGCACCTCCAGTCCAGACCCCTCTG...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACACCGGCAGAGGGGTCTaGACTGGAGGTGCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYTGRGV*TGGAVV
Trigger: CACGACAGCACCTCCAGTCCAGACCCCTCTGCCGGT...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAATCACTGCCTTGGGCTTaGGCCTGCCCAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKSLPWA*ACPAMA
Trigger: TGCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGA...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAACTGAAGTCACTGCCTTaGGCTTGGGCCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKLKSLP*AWACPA
Trigger: CGCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAG...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTTCTGTCCCCGTCATCTaGGCCAGGATGCGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TTARRGLCLITLGLLLPLSVPVI*ARMRKE
Trigger: CTCCTTCCGCATCCTGGCCCAGATGACGGGGACAGA...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCATGGGCTGAAAGGCCATaGTGCCAGTTGCGCAATTTG +
Preference number: 4 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPWAERP*CQLRNL
Trigger: CAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCA...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCCAGAAATGCTGCGGTTaGCCATCAGAGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLQKCCG*PSEVPP
Trigger: TGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTG...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCAGAGCTGCAGGGGGCTaGGCCCCAGCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QKRELWSQHTRYRKEGACRAAGG*APASAL
Trigger: CAGAGCTGATGCTGGGGCCCAGCCCCCTGCAGCTCT...GCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGCAGAGGGCAGGGGATTaGGCTACGGGCTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQQRAGD*ATGYLG
Trigger: CCCCAAATAGCCCGTAGCCCAATCCCCTGCCCTCTG...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTAGGGAGGCTCCCTCCTaGGAGTCCGACACCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCREAPS*ESDTRG
Trigger: GCCTCGGGTGTCGGACTCCCAGGAGGGAGCCTCCCT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTTGAAGCAGGGGCTGTaGTGGAGGCGGAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSLKQGL*WRRRRW
Trigger: CCATCGCCTCCGCCTCCACCACAGCCCCTGCTTCAA...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCGAGGTCACCCTGGCTaGGCTGGGACTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFRGHPG*AGTGLP
Trigger: AGGCAGCCCAGTCCCAGCTCAGCCAGGGTGACCTCG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCTCATGGTGTCTGTGTTaGCGCCGTCAATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISSWCLC*RRQWPP
Trigger: TGGTGGCCATTGACGGCGTCAACACAGACACCATGA...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp TCGATGGGCTTGTGGGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTGAAGTGTAGCTGGCAGACTTaGTCTTGTTCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SMGLWVDRAESFRALGLKCSWQT*SCSGLP
Trigger: TGGAAGCCCAGAACAAGATCAAGTCTGCCAGCTACA...CTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGTTGATTTCTGCAGGGTaGGGCTCAAGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GASTHGTERRVHAPTSPLLISAG*GSSCSW
Trigger: CCAGCTACAACTTGAGCCTCACCCTGCAGAAATCAA...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAAACTACCACCTTCTGGTaGGGGATCACCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKTTTFW*GITGRG
Trigger: CCCTCTGCCGGTGATCCCTCACCAGAAGGTGGTAGT...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR TCA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGTACTGCGCATGGATaGTGGTGGCCTTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTCTAHG*WWPCRP
Trigger: TGGGCGGCAAGGCCACCATCATCCATGCGCAGTACA...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCCCTGGGAATACATGCTaGTGGGCGTGTTGTACTGCG +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTPGNTC*WACCTA
Trigger: CGCAGTACAACACGCCCATCAGCATGTATTCCCAGG...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGATGAGGCCAGGAGCTaGGGATGGTGGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: SSITVGLTCQICVGVRMEDEARS*GWWETE
Trigger: CTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCATC...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCAGATGAGGCCAGGAGCTaGGGATGGTGGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPDEARS*GWWETE
Trigger: CTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCATC...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCCTCTTCCCCAGACCCTaGTCTACGGGTGACTCATTC +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTLFPRP*STGDSF
Trigger: GAATGAGTCACCCGTAGATCAGGGTCTGGGGAAGAG...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCCTCTTCCCCAGACCCTaGTCTACGGGTGACTCATTC +
Preference number: 4 (lower is better)
Translates to: LGLLLPLQRALFRAALSSLFPRP*STGDSF
Trigger: GAATGAGTCACCCGTAGATCAGGGTCTGGGGAAGAG...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTCTTCCCCAGACCCTaGTCTACGGGTGACTCATTC +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISLFPRP*STGDSF
Trigger: GAATGAGTCACCCGTAGATCAGGGTCTGGGGAAGAG...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCCTCATCTGGTACATCTaGGCCATCTCCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLLIWYI*AISLRV
Trigger: GACCCTGAGGGAGATGGCTCAGATGTACCAGATGAG...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCTCACACTGTAAGACATaGTGGTGCTGTCAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLSHCKT*WCCQRP
Trigger: CGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGA...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR GCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAGGTCTGGACTGGAGGTaGTGTCGTGGAGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGGLDWR*CRGDGN
Trigger: ATTCCCATCTCCACGACAGCACCTCCAGTCCAGACC...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACGGTCTGGACTGGAGGTaGTGTCGTGGAGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHGLDWR*CRGDGN
Trigger: ATTCCCATCTCCACGACAGCACCTCCAGTCCAGACC...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGATGGGCGTGTTGTACTaGGCATGGATGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQMGVLY*AWMMVA
Trigger: GGCCACCATCATCCATGCGCAGTACAACACGCCCAT...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR GCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGACCGTGGGGCTCACATaGCAGATCTGTGTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQTVGLT*QICVGV
Trigger: TACCCCCACACAGATCTGGCATGTGAGCCCCACGGT...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCAGCAAACCCCTCCTaGCCTCTCTGGTCTACAGCT +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSPANPS*PLWSTA
Trigger: AGCTGTAGACCAGAGAGGGCAGGAGGGGTTTGCTGG...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGGGTTCTGGGGTGTTATaGCAGCAAACCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQGSGVL*QQTPPA
Trigger: GGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACC...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAAGCCAGGAGGGGTCTCTaGCTCATTACCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKARRGL*LITLGL
Trigger: AAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGC...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAACCCCCACCTCACCACTaGCAGGAGGGGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQPPPHH*QEGSLP
Trigger: AGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGG...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGAAGAAAGGAGGGTGCATaGCCCCACCTCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: APSRVIHCQASPWGSHARRKEGA*PHLTTA
Trigger: GGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCT...TCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CCCAGCGATGGCATCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTCTCCCTCAGGGTCTCTaGCGAGTACAGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: PSDGIHDGILGIHADGRVLPQGL*RVQANG
Trigger: CCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAG...AACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGTCGTGGAGATGGGAATaGGACGCTTTGATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLSWRWE*DALISA
Trigger: TGCAGAAATCAAAGCGTCCCATTCCCATCTCCACGA...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CGAGACTGCAGGTTGGAGGAACGGCGTGCCCACTCGTCAGCCTCATCTTCTGGCGTGCTGTCGTGGAGATaGGAATGGGACGCTTTGATT +
Preference number: 4 (lower is better)
Translates to: RDCRLEERRAHSSASSSGVLSWR*EWDALI
Trigger: AATCAAAGCGTCCCATTCCCATCTCCACGACAGCAC...GCCAGAAGATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCCAGAGGGGTCTGGACTaGAGGTGCTGTCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGQRGLD*RCCRGD
Trigger: ATCTCCACGACAGCACCTCCAGTCCAGACCCCTCTG...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTGTACTGCGCATGGACCGGCAGAGGGGTCTaGACTGGAGGTGCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: SMMASWEYMLMGVLYCAWTGRGV*TGGAVV
Trigger: CACGACAGCACCTCCAGTCCAGACCCCTCTGCCGGT...CCATGCGCAGTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCTCTGTCCCCGTCATCTaGGCCAGGATGCGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCSVPVI*ARMRKE
Trigger: CTCCTTCCGCATCCTGGCCCAGATGACGGGGACAGA...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACTCTGTCCCCGTCATCTaGGCCAGGATGCGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYSVPVI*ARMRKE
Trigger: CTCCTTCCGCATCCTGGCCCAGATGACGGGGACAGA...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCCAGAAATGCTGCGGTTaGCCATCAGAGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGQKCCG*PSEVPP
Trigger: TGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTG...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAGCATCAGCTCTGGGGTaGGCAGAGGACAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGASALG*AEDRNA
Trigger: AGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGC...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCGCATCAGCTCTGGGGTaGGCAGAGGACAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISASALG*AEDRNA
Trigger: AGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGC...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCGCATCAGCTCTGGGGTaGGCAGAGGACAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLASALG*AEDRNA
Trigger: AGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGC...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACTGGCGAGGGTTGCCCTaGGGAGGTTTGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYWRGLP*GGLVGT
Trigger: TGTACCCACCAAACCTCCCCAGGGCAACCCTCGCCA...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGGCGAGGGTTGCCCTaGGGAGGTTTGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTWRGLP*GGLVGT
Trigger: TGTACCCACCAAACCTCCCCAGGGCAACCCTCGCCA...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCCATCCATTTCCCTTaGTTCTGGGGTGTTATGCCA +
Preference number: 4 (lower is better)
Translates to: GASTHGTERRVHAPTSPLPIHFP*FWGVMP
Trigger: TGGCATAACACCCCAGAACCAAGGGAAATGGATGGG...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACTTATATTGCCTCGGCTaGCTCGAGCCCGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYLYCLG*LEPGRA
Trigger: AGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAA...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGGGTGGTGGCCTGGCTaGTGCACACCGGCGCATGCT +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFGWWPG*CTPAHA
Trigger: AGCATGCGCCGGTGTGCACCAGCCAGGCCACCACCC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTATCTGTCACCCAGGGTaGACGGCTGGCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCICHPG*TAGRLR
Trigger: GCGGAGCCTGCCAGCCGTCCACCCTGGGTGACAGAT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGGTCCCCCTGGCAAGTaGTGGCACCTGAGGACCCGC +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFGPPGK*WHLRTR
Trigger: GCGGGTCCTCAGGTGCCACCACTTGCCAGGGGGACC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCCATGGCTACCAGAAATaGGCCCCGGATGACATTGTT +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVHGYQK*APDDIV
Trigger: AACAATGTCATCCGGGGCCCATTTCTGGTAGCCATG...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCGCCAAGAACGGCCCATaGCTACCAGAAATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSAKNGP*LPEMGP
Trigger: GGGGCCCATTTCTGGTAGCCATGGGCCGTTCTTGGC...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCAGCCAGAGCCCTTCCTaGAGCCCTGGCAATTGCCCA +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSSQSPS*SPGNCP
Trigger: TGGGCAATTGCCAGGGCTCCAGGAAGGGCTCTGGCT...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 72 bp CAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCCAGCAGAGTTATACAT +
Preference number: 4 (lower is better)
Translates to: QLWGGQRTEMLR*AIRGAPSRVIH
Trigger: ATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CAA 72 bp ATTCCCCTCAGAAGAAACATCAGCCTCCCGAATCCTTaGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: IPLRRNISLPNP*LPAAGAAPGLV
Trigger: GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCATGGTGTCTGTGTTaGCGCCGTCAATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGSWCLC*RRQWPP
Trigger: TGGTGGCCATTGACGGCGTCAACACAGACACCATGA...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GCGATGGCATCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTGTACTCAGGGCACTGGGGTTaGAGCGTTCCTGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: AMASMMASWEYMLMGVLYSGHWG*SVPGSR
Trigger: CCGACTACCAGGAACGCTTCAACCCCAGTGCCCTGA...GTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp GTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGTGTACTGCGCATGGATaGTGGTGGCCTTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VGHQRCPQQSYTLSSITVCTAHG*WWPCRP
Trigger: TGGGCGGCAAGGCCACCATCATCCATGCGCAGTACA...CACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp CCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTACTGCGCATGGATaGTGGTGGCCTTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PQQSYTLSSITVGLTCQICTAHG*WWPCRP
Trigger: TGGGCGGCAAGGCCACCATCATCCATGCGCAGTACA...GATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp GCGATGGCATCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTGTACTGTACTGCGCATGGATaGTGGTGGCCTTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: AMASMMASWEYMLMGVLYCTAHG*WWPCRP
Trigger: TGGGCGGCAAGGCCACCATCATCCATGCGCAGTACA...GTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCCTGGGAATACATGCTaGTGGGCGTGTTGTACTGCG +
Preference number: 4 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCPGNTC*WACCTA
Trigger: CGCAGTACAACACGCCCATCAGCATGTATTCCCAGG...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCATTCAAACCTTTCCCTTaGCCTTCGCAGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPFKPFP*PSQSFF
Trigger: GAAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAA...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCACCCTGATCTACGGGTaGCTCATTCTAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LGLLLPLQRALFRAALSSTLIYG*LILGGD
Trigger: ATCCCCTCCTAGAATGAGTCACCCGTAGATCAGGGT...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCAACCCTGATCTACGGGTaGCTCATTCTAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: YGASTHGTERRVHAPTSPTLIYG*LILGGD
Trigger: ATCCCCTCCTAGAATGAGTCACCCGTAGATCAGGGT...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCTCATCTGGTACATCTaGGCCATCTCCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TTARRGLCLITLGLLLPLLIWYI*AISLRV
Trigger: GACCCTGAGGGAGATGGCTCAGATGTACCAGATGAG...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCGGTCTGGACTGGAGGTaGTGTCGTGGAGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGGLDWR*CRGDGN
Trigger: ATTCCCATCTCCACGACAGCACCTCCAGTCCAGACC...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGATGGGCGTGTTGTACTaGGCATGGATGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSITVGLTCQICVGVRMEMGVLY*AWMMVA
Trigger: GGCCACCATCATCCATGCGCAGTACAACACGCCCAT...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR GCA 90 bp GTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGGTTGGAGGAACGGCGTaGCCACTCGTCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: VIHCQASPWGSHARSVWGVGGTA*PLVSLI
Trigger: GATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAAC...CCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCGGCCATGGTGCCAGTTaGGCAATTTGGCAAAACGTG +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTGHGAS*AIWQNV
Trigger: CACGTTTTGCCAAATTGCGCAACTGGCACCATGGCC...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCGGCCATGGTGCCAGTTaGGCAATTTGGCAAAACGTG +
Preference number: 4 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLGHGAS*AIWQNV
Trigger: CACGTTTTGCCAAATTGCGCAACTGGCACCATGGCC...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCAGCTGAAAGGCCATGGTaGCAGTTGCGCAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: YGASTHGTERRVHAPTSPAERPW*QLRNLA
Trigger: TGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGC...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACGCTGAAAGGCCATGGTaGCAGTTGCGCAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHAERPW*QLRNLA
Trigger: TGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGC...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACA +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTVGHQR*PQQSYT
Trigger: TGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLRGQKC*GWPSEV
Trigger: CACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGRGQKC*GWPSEV
Trigger: CACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGACCAGCAAACCCCTCCTaGCCTCTCTGGTCTACAGCT +
Preference number: 4 (lower is better)
Translates to: APSRVIHCQASPWGSHARPANPS*PLWSTA
Trigger: AGCTGTAGACCAGAGAGGGCAGGAGGGGTTTGCTGG...TCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACCCAGCAAACCCCTCCTaGCCTCTCTGGTCTACAGCT +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYPANPS*PLWSTA
Trigger: AGCTGTAGACCAGAGAGGGCAGGAGGGGTTTGCTGG...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACGGTTCTGGGGTGTTATaGCAGCAAACCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYGSGVL*QQTPPA
Trigger: GGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACC...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAAGGTTCTGGGGTGTTATaGCAGCAAACCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKGSGVL*QQTPPA
Trigger: GGCAGGAGGGGTTTGCTGGCATAACACCCCAGAACC...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATGCCAGGAGGGGTCTCTaGCTCATTACCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: CCGWPSEVPPAELYIVKHARRGL*LITLGL
Trigger: AAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGC...ATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCTCCCTCAGGGTCTCTaGCGAGTACAGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: CCGWPSEVPPAELYIVKHLPQGL*RVQANG
Trigger: CCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAG...ATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCCACAAAGCACACATCTaGCAGGGAAGTCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVHKAHI*QGSLAV
Trigger: TACTGCAAGACTTCCCTGGCAGATGTGTGCTTTGTG...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACAGGCTGCCTTGCTGCCTaGTGTGATCCGGGAGATAGT +
Preference number: 4 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTGCLAA*CDPGDS
Trigger: ACTATCTCCCGGATCACACCAGGCAGCAAGGCAGCC...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCATTCTGGGCTTCCAGGTaGGTCATGGTGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: YGASTHGTERRVHAPTSPFWASR*VMVSVL
Trigger: CAACACAGACACCATGACCCACCTGGAAGCCCAGAA...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGATTCTGGGCTTCCAGGTaGGTCATGGTGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGFWASR*VMVSVL
Trigger: CAACACAGACACCATGACCCACCTGGAAGCCCAGAA...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTTCTGGGCTTCCAGGTaGGTCATGGTGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTFWASR*VMVSVL
Trigger: CAACACAGACACCATGACCCACCTGGAAGCCCAGAA...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGAGGGGTCTGGACTaGAGGTGCTGTCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCQRGLD*RCCRGD
Trigger: ATCTCCACGACAGCACCTCCAGTCCAGACCCCTCTG...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGCGATGGGCTTGTGGGTaGACAGGGCCGAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VIHCQASPWGSHARSVWGRWACG*TGPSPS
Trigger: TGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCG...CCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAACCTCGATGGGCTTGTaGGTGGACAGGGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLTSMGL*VDRAES
Trigger: GGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCCCCTTCACCTCGATaGGCTTGTGGGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQAPSPR*ACGWTG
Trigger: CCCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGC...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACGTGTTGTACTGCGCATaGATGATGGTGGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: RELWSQHTRYRKEGACPHVLYCA*MMVALP
Trigger: CGGCAAGGCCACCATCATCCATGCGCAGTACAACAC...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAATCACTGCCTTGGGCTTaGGCCTGCCCAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQSLPWA*ACPAMA
Trigger: TGCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGA...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp CCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCAGCGAGACTGCAGGTTaGAGGAACGGCGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: PQQSYTLSSITVGLTCQISETAG*RNGVPT
Trigger: AGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCT...GATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTTAATCACAGCCTGGTAGACGGGAGAGGCGCTGTCTACGGCAAGGTCCTTAATAGCGAGACTGCAGGTTaGAGGAACGGCGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LNHSLVDGRGAVYGKVLNSETAG*RNGVPT
Trigger: AGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCT...ATTAAGGACCTTGCCGTAGACAGCGCCTCTCCCGTCTACCAGGCTGTGATTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTGGGCTGAAAGGCCATaGTGCCAGTTGCGCAATTTG +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTWAERP*CQLRNL
Trigger: CAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCA...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCTGGGCTGAAAGGCCATaGTGCCAGTTGCGCAATTTG +
Preference number: 4 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLWAERP*CQLRNL
Trigger: CAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCA...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCTGTCAAGCATCACCGTaGGGCTCACATGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISCQASP*GSHARS
Trigger: AGATCTGGCATGTGAGCCCCACGGTGATGCTTGACA...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAACAGAAATGCTGCGGTTaGCCATCAGAGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKQKCCG*PSEVPP
Trigger: TGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTG...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCTGGCGAGGGTTGCCCTaGGGAGGTTTGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: QKRELWSQHTRYRKEGACWRGLP*GGLVGT
Trigger: TGTACCCACCAAACCTCCCCAGGGCAACCCTCGCCA...GCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGGGGCTACGGGCTATTTaGGGGGTGGCGAGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: SRVIHCQASPWGSHARSVGLRAI*GVARVA
Trigger: GGCAACCCTCGCCACCCCCCAAATAGCCCGTAGCCC...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCCAGAGGGCAGGGGATTaGGCTACGGGCTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: PQQSYTLSSITVGLTCQIQRAGD*ATGYLG
Trigger: CCCCAAATAGCCCGTAGCCCAATCCCCTGCCCTCTG...GATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CAA 72 bp ATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTaGTACTGCGCATGGATGATGGTGGCCTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: MMASWEYMLMGV*YCAWMMVALPP
Trigger: GGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTCGAGGTCACCCTGGCTaGGCTGGGACTGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTRGHPG*AGTGLP
Trigger: AGGCAGCCCAGTCCCAGCTCAGCCAGGGTGACCTCG...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGTGTAGCTGGCAGACTTaGTCTTGTTCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQCSWQT*SCSGLP
Trigger: TGGAAGCCCAGAACAAGATCAAGTCTGCCAGCTACA...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACTGTAGCTGGCAGACTTaGTCTTGTTCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHCSWQT*SCSGLP
Trigger: TGGAAGCCCAGAACAAGATCAAGTCTGCCAGCTACA...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAACTACCACCTTCTGGTaGGGGATCACCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLTTTFW*GITGRG
Trigger: CCCTCTGCCGGTGATCCCTCACCAGAAGGTGGTAGT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR TCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTTCAGGGCACTGGGGTTaGAGCGTTCCTGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCSGHWG*SVPGSR
Trigger: CCGACTACCAGGAACGCTTCAACCCCAGTGCCCTGA...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR TCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGCGATGGCATCCATaGTGGCATCCTGGGAATACA +
Preference number: 4 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCQRWHP*WHPGNT
Trigger: TGTATTCCCAGGATGCCATCATGGATGCCATCGCTG...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACAAGGATGGTGGGAAACTaGGCAGCGGCCCATCCATTT +
Preference number: 4 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTRMVGN*AAAHPF
Trigger: AAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCT...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCAGGATGGTGGGAAACTaGGCAGCGGCCCATCCATTT +
Preference number: 4 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCRMVGN*AAAHPF
Trigger: AAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCT...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGACCCTGATCTACGGGTaGCTCATTCTAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: SSITVGLTCQICVGVRMETLIYG*LILGGD
Trigger: ATCCCCTCCTAGAATGAGTCACCCGTAGATCAGGGT...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GCTGTCTACGGCAAGGTCCTTAATAGGGAGGCTCCCACTGAAGTCACTGCCTTGCTCTTCCCCAGACCCTaGTCTACGGGTGACTCATTC +
Preference number: 4 (lower is better)
Translates to: AVYGKVLNREAPTEVTALLFPRP*STGDSF
Trigger: GAATGAGTCACCCGTAGATCAGGGTCTGGGGAAGAG...CAAGGCAGTGACTTCAGTGGGAGCCTCCCTATTAAGGACCTTGCCGTAGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCCTGAGAGAGGGTGGCTaGCAGGGCCATCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSLREGG*QGHLFS
Trigger: TGAGAAAAGATGGCCCTGTCAGCCACCCTCTCTCAG...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCCTTGTCTGCAGCTCCTaGCAAATCTCCAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSLVCSS*QISRQS
Trigger: GGACTGCCTGGAGATTTGTCAGGAGCTGCAGACAAG...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTAAGACATGCTGGTaGTGTCAGCGGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PQQSYTLSSITVGLTCQICKTCW*CQRPPL
Trigger: CAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACA...GATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR GCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACTCACACTGTAAGACATaGTGGTGCTGTCAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYSHCKT*WCCQRP
Trigger: CGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGA...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR GCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCGGACGCTTTGATTTCTaGAGGGTGAGGCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISGRFDF*RVRLKL
Trigger: CAACTTGAGCCTCACCCTGCAGAAATCAAAGCGTCC...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATGGGCGTGTTGTACTaGGCATGGATGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYMGVLY*AWMMVA
Trigger: GGCCACCATCATCCATGCGCAGTACAACACGCCCAT...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR GCA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGCCTTGGGCTTGGGCCTaGCCAGCGATGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: SRVIHCQASPWGSHARSVPWAWA*PAMASM
Trigger: CATGGATGCCATCGCTGGGCAGGCCCAAGCCCAAGG...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR GCA 90 bp GAGGCGCTGTCTACGGCAAGGTCCTTAATAGGGAGGCTCCCACTGAAGTCACTGGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACA +
Preference number: 4 (lower is better)
Translates to: EALSTARSLIGRLPLKSLVGHQR*PQQSYT
Trigger: TGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC...CAGTGACTTCAGTGGGAGCCTCCCTATTAAGGACCTTGCCGTAGACAGCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR GCA 90 bp CAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCGTACAGAAAGGAGGGTaGATGCCCCCACCTCACCAC +
Preference number: 4 (lower is better)
Translates to: QKRELWSQHTRYRKEGACVQKGG*MPPPHH
Trigger: GTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTAC...GCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACAATGGGGTTGTTATATTaGCTCGGCTGGCTCGAGCCC +
Preference number: 4 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTMGLLY*LGWLEP
Trigger: GGGCTCGAGCCAGCCGAGGCAATATAACAACCCCAT...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTTGGAGGTGGTGCTCTTaGCCGGGGCAAACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCWRWCS*PGQTSG
Trigger: CCCAGAAGTTTGCCCCGGGCAAGAGCACCACCTCCA...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACCCCGGGGCAGGGTCTaGTTGCTGATGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGPRGRV*LLMEVV
Trigger: CACCACCTCCATCAGCAAGCAGACCCTGCCCCGGGG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCCAAAAGGCTTCTTaGAGGCCGCACAGACGAAGC +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSSQKAS*RPHRRS
Trigger: GCTTCGTCTGTGCGGCCTGCAAGAAGCCTTTTGGGA...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCATACCCTGCAGCGAGTaGTGTTTGGCACTTCAATTT +
Preference number: 4 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVIPCSE*CLALQF
Trigger: AAATTGAAGTGCCAAACAGCACTCGCTGCAGGGTAT...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACGACTTGATCTTGTTCTaGGCTTCCAGGTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHDLILF*ASRWVM
Trigger: CATGACCCACCTGGAAGCCCAGAACAAGATCAAGTC...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCGACTTGATCTTGTTCTaGGCTTCCAGGTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: LGLLLPLQRALFRAALSSDLILF*ASRWVM
Trigger: CATGACCCACCTGGAAGCCCAGAACAAGATCAAGTC...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCGTGCTGTCGTGGAGATaGGAATGGGACGCTTTGATT +
Preference number: 4 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLVLSWR*EWDALI
Trigger: AATCAAAGCGTCCCATTCCCATCTCCACGACAGCAC...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACGTAGTCGGCGTTGGCTaGAGAGTTGACTACCACCTT +
Preference number: 4 (lower is better)
Translates to: RELWSQHTRYRKEGACPHVVGVG*RVDYHL
Trigger: AAGGTGGTAGTCAACTCTCCAGCCAACGCCGACTAC...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR CCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCAGTAGTCGGCGTTGGCTaGAGAGTTGACTACCACCTT +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSVVGVG*RVDYHL
Trigger: AAGGTGGTAGTCAACTCTCCAGCCAACGCCGACTAC...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR CCA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGACCTCGATGGGCTTGTaGGTGGACAGGGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SRVIHCQASPWGSHARSVTSMGL*VDRAES
Trigger: GGACTCGGCCCTGTCCACCCACAAGCCCATCGAGGT...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGGCCCCTTCACCTCGATaGGCTTGTGGGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: SRVIHCQASPWGSHARSVAPSPR*ACGWTG
Trigger: CCCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGC...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp GCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGAGTGTTGTACTGCGCATaGATGATGGTGGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: APSRVIHCQASPWGSHARVLYCA*MMVALP
Trigger: CGGCAAGGCCACCATCATCCATGCGCAGTACAACAC...TCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAAGCGAGACTGCAGGTTaGAGGAACGGCGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQSETAG*RNGVPT
Trigger: AGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCT...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCGCCAGTTGCGCAATTTaGCAAAACGTGGGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLASCAI*QNVGCY
Trigger: GTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGC...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGCCCATCCATTTCCCTTaGTTCTGGGGTGTTATGCCA +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQPIHFP*FWGVMP
Trigger: TGGCATAACACCCCAGAACCAAGGGAAATGGATGGG...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCCCATCCATTTCCCTTaGTTCTGGGGTGTTATGCCA +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISPIHFP*FWGVMP
Trigger: TGGCATAACACCCCAGAACCAAGGGAAATGGATGGG...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGTCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLPLQRALFRAALSSRGQSASLP*GFYFLF
Trigger: GAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGA...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCAGGTTGGAGGAACGGCGTGCCCACTCGTCAGCCTCATCTTCTGGCTTGTTCTCCGAGTACAGGCCAATaGGGTTGTTATATTGCCTCG +
Preference number: 4 (lower is better)
Translates to: AGWRNGVPTRQPHLLACSPSTGQ*GCYIAS
Trigger: CGAGGCAATATAACAACCCCATTGGCCTGTACTCGG...AGAACAAGCCAGAAGATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATGGAGGCGGAGGCGATaGCAGTGTGGGCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGWRRRR*QCGQQL
Trigger: CAGCTGCTGCCCACACTGCCATCGCCTCCGCCTCCA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGGCCCTCACTGTAGCTaGTGTGGGTGGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFGPHCS*CGWQVL
Trigger: CAGCACCTGCCACCCACACCAGCTACAGTGAGGGCC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAGAGTGGGACTGTAATTaGCCCCTGGGGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLEWDCN*PLGTGC
Trigger: ACAGCCCGTCCCCAGGGGCCAATTACAGTCCCACTC...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTCCCCCTGGCAAGTGGTaGCACCTGAGGACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTPPGKW*HLRTRW
Trigger: CCAGCGGGTCCTCAGGTGCCACCACTTGCCAGGGGG...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCAGTCCGGCTGCTGGCTaGGAATCGCTCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFSPAAG*ESLSPL
Trigger: CAGAGGGCTGAGCGATTCCCAGCCAGCAGCCGGACT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTACTTCCTGATGCTCCCTaGGGGAGACTGGTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLLPDAP*GRLVAS
Trigger: CGAAGCCACCAGTCTCCCCCAGGGAGCATCAGGAAG...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 72 bp GTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGGCTCACATGCCAGATC +
Preference number: 4 (lower is better)
Translates to: VGHQRCPQQSYT*SSITVGLTCQI
Trigger: GATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGTCATGGTGTCTGTGTTaGCGCCGTCAATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: VGHQRCPQQSYTLSSITVSWCLC*RRQWPP
Trigger: TGGTGGCCATTGACGGCGTCAACACAGACACCATGA...CACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTGTAGCTGGCAGACTTaGTCTTGTTCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGCSWQT*SCSGLP
Trigger: TGGAAGCCCAGAACAAGATCAAGTCTGCCAGCTACA...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTTGATTTCTGCAGGGTaGGGCTCAAGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGLISAG*GSSCSW
Trigger: CCAGCTACAACTTGAGCCTCACCCTGCAGAAATCAA...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGTTGATTTCTGCAGGGTaGGGCTCAAGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQLISAG*GSSCSW
Trigger: CCAGCTACAACTTGAGCCTCACCCTGCAGAAATCAA...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGCGTTGGCTGGAGAGTTaGCTACCACCTTCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VIHCQASPWGSHARSVWGRWLES*LPPSGE
Trigger: CTCACCAGAAGGTGGTAGTCAACTCTCCAGCCAACG...CCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR TCA 90 bp GCGATGGCATCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTGTACCCTGGGAATACATGCTaGTGGGCGTGTTGTACTGCG +
Preference number: 4 (lower is better)
Translates to: AMASMMASWEYMLMGVLYPGNTC*WACCTA
Trigger: CGCAGTACAACACGCCCATCAGCATGTATTCCCAGG...GTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp GCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGACAGCGATGGCATCCATaGTGGCATCCTGGGAATACA +
Preference number: 4 (lower is better)
Translates to: APSRVIHCQASPWGSHARQRWHP*WHPGNT
Trigger: TGTATTCCCAGGATGCCATCATGGATGCCATCGCTG...TCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR TCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCCAGCGATGGCATCCATaGTGGCATCCTGGGAATACA +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSQRWHP*WHPGNT
Trigger: TGTATTCCCAGGATGCCATCATGGATGCCATCGCTG...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR TCA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGATTCAAACCTTTCCCTTaGCCTTCGCAGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SITVGLTCQICVGVRMEGFKPFP*PSQSFF
Trigger: GAAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAA...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCTTCAAACCTTTCCCTTaGCCTTCGCAGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLFKPFP*PSQSFF
Trigger: GAAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAA...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTTCAAACCTTTCCCTTaGCCTTCGCAGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTFKPFP*PSQSFF
Trigger: GAAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAA...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAAACCCTGATCTACGGGTaGCTCATTCTAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKTLIYG*LILGGD
Trigger: ATCCCCTCCTAGAATGAGTCACCCGTAGATCAGGGT...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGAACCCTGATCTACGGGTaGCTCATTCTAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: APSRVIHCQASPWGSHARTLIYG*LILGGD
Trigger: ATCCCCTCCTAGAATGAGTCACCCGTAGATCAGGGT...TCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGCGGGGTCCTTCTGGTaGGGGATCACCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEAGSFW*GITGRG
Trigger: CCCTCTGCCGGTGATCCCTCACCAGAAGGACCCCGC...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGGATGCTGGCAGTGGTaGCAACCCGGGGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTGCWQW*QPGAWV
Trigger: CACCCAAGCCCCGGGTTGTCACCACTGCCAGCATCC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAATCCATGTCCCTTCCTaGTGCTCCCTGGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLIHVPS*CSLGET
Trigger: AGTCTCCCCCAGGGAGCATCAGGAAGGGACATGGAT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCACACGGCCTTACTCCTaGCACTACACCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSTRPYS*HYTRLT
Trigger: TGTGAGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGT...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGTAGAGAGGGTTGAGTaGGAGGGCACTCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQVERVE*EGTQAL
Trigger: GAGTGCCTGAGTGCCCTCTCACTCAACCCTCTCTAC...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372066.8
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGCTGCCCAGCCGGGCTaGGTGGAGCTCTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQAAQPG*VELLRG
Trigger: GCCTCTCAAGAGCTCCACGCAGCCCGGCTGGGCAGC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCAGGACGCTTTGATTTCTaGAGGGTGAGGCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPGRFDF*RVRLKL
Trigger: CAACTTGAGCCTCACCCTGCAGAAATCAAAGCGTCC...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCGGACGCTTTGATTTCTaGAGGGTGAGGCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCGRFDF*RVRLKL
Trigger: CAACTTGAGCCTCACCCTGCAGAAATCAAAGCGTCC...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCTCTTCATCAGGGTCTTaGATGAATTCTGTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: LGLLLPLQRALFRAALSSSSSGS*MNSVPV
Trigger: GACGGGGACAGAATTCATGCAAGACCCTGATGAAGA...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACGGCCATGGTGCCAGTTaGGCAATTTGGCAAAACGTG +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYGHGAS*AIWQNV
Trigger: CACGTTTTGCCAAATTGCGCAACTGGCACCATGGCC...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAAGCTGAAAGGCCATGGTaGCAGTTGCGCAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKAERPW*QLRNLA
Trigger: TGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGC...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACGCTGAAAGGCCATGGTaGCAGTTGCGCAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYAERPW*QLRNLA
Trigger: TGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGC...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACAAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTRGQKC*GWPSEV
Trigger: CACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATGGTGGCCTGGCTGGTaGACACCGGCGCATGCTCAA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGWWPGW*TPAHAQ
Trigger: TTGAGCATGCGCCGGTGTGCACCAGCCAGGCCACCA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR GCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTACGGGCTGTAGGTAGATaGAGGCACTGGCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLRAVGR*RHWLVD
Trigger: GTCTACCAGCCAGTGCCTGCATCTACCTACAGCCCG...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTGGAGGTGGTGCTCTTaGCCGGGGCAAACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFWRWCS*PGQTSG
Trigger: CCCAGAAGTTTGCCCCGGGCAAGAGCACCACCTCCA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTATGAAGCAGGTGTCGTaGCAAGTGTGGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCMKQVS*QVWPRA
Trigger: AGCCCTGGGCCACACTTGGCACGACACCTGCTTCAT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTACTCGGCCTCCCAAAGTaGTGGGATAACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLLGLPK*WDNRRE
Trigger: CTCACGCCTGTTATCCCAGCACTTTGGGAGGCCGAG...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCTCGGCCTCCCAAAGTaGTGGGATAACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCLGLPK*WDNRRE
Trigger: CTCACGCCTGTTATCCCAGCACTTTGGGAGGCCGAG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTTCTGGGCTTCCAGGTaGGTCATGGTGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSFWASR*VMVSVL
Trigger: CAACACAGACACCATGACCCACCTGGAAGCCCAGAA...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCAGACTTGATCTTGTTCTaGGCTTCCAGGTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSDLILF*ASRWVM
Trigger: CATGACCCACCTGGAAGCCCAGAACAAGATCAAGTC...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCGTGCTGTCGTGGAGATaGGAATGGGACGCTTTGATT +
Preference number: 4 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGVLSWR*EWDALI
Trigger: AATCAAAGCGTCCCATTCCCATCTCCACGACAGCAC...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGTGCTGTCGTGGAGATaGGAATGGGACGCTTTGATT +
Preference number: 4 (lower is better)
Translates to: SSITVGLTCQICVGVRMEVLSWR*EWDALI
Trigger: AATCAAAGCGTCCCATTCCCATCTCCACGACAGCAC...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTACAGAGGGGTCTGGACTaGAGGTGCTGTCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLQRGLD*RCCRGD
Trigger: ATCTCCACGACAGCACCTCCAGTCCAGACCCCTCTG...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGTGTTGTACTGCGCATaGATGATGGTGGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: VGHQRCPQQSYTLSSITVVLYCA*MMVALP
Trigger: CGGCAAGGCCACCATCATCCATGCGCAGTACAACAC...CACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACTCCATGATGGCATCCTaGGAATACATGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RELWSQHTRYRKEGACPHSMMAS*EYMLMG
Trigger: GCCCATCAGCATGTATTCCCAGGATGCCATCATGGA...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCATCCATGATGGCATCCTaGGAATACATGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPSMMAS*EYMLMG
Trigger: GCCCATCAGCATGTATTCCCAGGATGCCATCATGGA...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGCCAGTTGCGCAATTTaGCAAAACGTGGGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: SSITVGLTCQICVGVRMEASCAI*QNVGCY
Trigger: GTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGC...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAATGGGCTGAAAGGCCATaGTGCCAGTTGCGCAATTTG +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKWAERP*CQLRNL
Trigger: CAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCA...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCTGTCAAGCATCACCGTaGGGCTCACATGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCCQASP*GSHARS
Trigger: AGATCTGGCATGTGAGCCCCACGGTGATGCTTGACA...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCCATTTCCCTTGGTTCTaGGGTGTTATGCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLHFPWF*GVMPAN
Trigger: GTTTGCTGGCATAACACCCCAGAACCAAGGGAAATG...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCCCCATCCATTTCCCTTaGTTCTGGGGTGTTATGCCA +
Preference number: 4 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGPIHFP*FWGVMP
Trigger: TGGCATAACACCCCAGAACCAAGGGAAATGGATGGG...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCATCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSSASLP*GFYFLF
Trigger: GAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGA...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACTCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RELWSQHTRYRKEGACPHSASLP*GFYFLF
Trigger: GAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGA...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGCAGAAGAGAGAACTATaGAGCCAGCACACACGGTAC +
Preference number: 4 (lower is better)
Translates to: SSITVGLTCQICVGVRMEQKREL*SQHTRY
Trigger: GTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCAGAAGAGAGAACTATaGAGCCAGCACACACGGTAC +
Preference number: 4 (lower is better)
Translates to: RELWSQHTRYRKEGACPHQKREL*SQHTRY
Trigger: GTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG...GTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGAAGAGAGAACTATaGAGCCAGCACACACGGTAC +
Preference number: 4 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCQKREL*SQHTRY
Trigger: GTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACAGAAGAGAGAACTATaGAGCCAGCACACACGGTAC +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSQKREL*SQHTRY
Trigger: GTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGCCGAGTACAGGCCAATaGGGTTGTTATATTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQPSTGQ*GCYIAS
Trigger: CGAGGCAATATAACAACCCCATTGGCCTGTACTCGG...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCGAGTACAGGCCAATaGGGTTGTTATATTGCCTCG +
Preference number: 4 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPPSTGQ*GCYIAS
Trigger: CGAGGCAATATAACAACCCCATTGGCCTGTACTCGG...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATAGCGGGGTGGTGGCCTaGCTGGTGCACACCGGCGCA +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYSGVVA*LVHTGA
Trigger: TGCGCCGGTGTGCACCAGCCAGGCCACCACCCCGCT...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAGGTAGATGCAGGCACTaGCTGGTAGACAGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLGRCRH*LVDRRP
Trigger: CGGCCTTCTGTCTACCAGCCAGTGCCTGCATCTACC...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATCTGGACGGTCCCCCTaGCAAGTGGTGGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGSGRSP*QVVAPE
Trigger: CTCAGGTGCCACCACTTGCCAGGGGGACCGTCCAGA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGTGGAGTCCGGCTGCTaGCTGGGAATCGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTVESGC*LGIAQP
Trigger: GGGCTGAGCGATTCCCAGCCAGCAGCCGGACTCCAC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGGGGTCTGTCCTTCTTaGAGTAGAACGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCGVCPS*SRTAAP
Trigger: AGGGGCAGCCGTTCTACTCCAAGAAGGACAGACCCC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCCTGGCAATTGCCCAGTaGCTCCCAGAAGACATCTCT +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSLAIAQ*LPEDIS
Trigger: AGAGATGTCTTCTGGGAGCCACTGGGCAATTGCCAG...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACCCTTCCTGGAGCCCTaGCAATTGCCCAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGPFLEP*QLPSGS
Trigger: GGAGCCACTGGGCAATTGCCAGGGCTCCAGGAAGGG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCTTGATTTCTGCAGGGTaGGGCTCAAGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCLISAG*GSSCSW
Trigger: CCAGCTACAACTTGAGCCTCACCCTGCAGAAATCAA...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCCTGGGAATACATGCTaGTGGGCGTGTTGTACTGCG +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCPGNTC*WACCTA
Trigger: CGCAGTACAACACGCCCATCAGCATGTATTCCCAGG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR TCA 90 bp GAGGCGCTGTCTACGGCAAGGTCCTTAATAGGGAGGCTCCCACTGAAGTCACTGTTCAAACCTTTCCCTTaGCCTTCGCAGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EALSTARSLIGRLPLKSLFKPFP*PSQSFF
Trigger: GAAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAA...CAGTGACTTCAGTGGGAGCCTCCCTATTAAGGACCTTGCCGTAGACAGCGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTTGCAGTAGGCACAGGTaGACTCTTCAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCCSRHR*TLQGAK
Trigger: CTTGGCACCCTGAAGAGTTCACCTGTGCCTACTGCA...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTTGGCCGCCTACAAGTTaGTGGTGTGTGCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCWPPTS*WCVRAS
Trigger: AGAAGCACGCACACACCATCAACTTGTAGGCGGCCA...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp AAAGCTAGCGTGGCAAGGTATGTAGAGGTTGGTCATCTGGCTCCCACTTCCTCCGACATACTGCGCAAATaGAGCAGGTGTCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: KASVARYVEVGHLAPTSSDILRK*SRCRAK
Trigger: CTTGGCACGACACCTGCTTCATTTGCGCAGTATGTC...GGAGGAAGTGGGAGCCAGATGACCAACCTCTACATACCTTGCCACGCTAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGGCTGCCCAGCCGGGCTaGGTGGAGCTCTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKAAQPG*VELLRG
Trigger: GCCTCTCAAGAGCTCCACGCAGCCCGGCTGGGCAGC...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTGTAAGACATGCTGGTaGTGTCAGCGGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFCKTCW*CQRPPL
Trigger: CAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTATCACACTGTAAGACATaGTGGTGCTGTCAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLSHCKT*WCCQRP
Trigger: CGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGA...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCGGACGCTTTGATTTCTaGAGGGTGAGGCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSGRFDF*RVRLKL
Trigger: CAACTTGAGCCTCACCCTGCAGAAATCAAAGCGTCC...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGGTCTGGACTGGAGGTaGTGTCGTGGAGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCGLDWR*CRGDGN
Trigger: ATTCCCATCTCCACGACAGCACCTCCAGTCCAGACC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGTTGGAGGAACGGCGTaGCCACTCGTCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGVGGTA*PLVSLI
Trigger: GATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAAC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCATCTTCATCAGGGTCTTaGATGAATTCTGTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPSSSGS*MNSVPV
Trigger: GACGGGGACAGAATTCATGCAAGACCCTGATGAAGA...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCGGCCATGGTGCCAGTTaGGCAATTTGGCAAAACGTG +
Preference number: 4 (lower is better)
Translates to: QKRELWSQHTRYRKEGACGHGAS*AIWQNV
Trigger: CACGTTTTGCCAAATTGCGCAACTGGCACCATGGCC...GCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCGCTGAAAGGCCATGGTaGCAGTTGCGCAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: QKRELWSQHTRYRKEGACAERPW*QLRNLA
Trigger: TGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGC...GCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATAGAGGACAGAAATGCTaGGGTTGGCCATCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: CCGWPSEVPPAELYIVKHRGQKC*GWPSEV
Trigger: CACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT...ATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGCCCCCACCTCACCACTaGCAGGAGGGGTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEPPPHH*QEGSLP
Trigger: AGGCAGAGACCCCTCCTGGCAGTGGTGAGGTGGGGG...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGAGGGCTGGGGCTGGGTaGCACCAGGCTGCCGTTCGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKRAGAG*HQAAVR
Trigger: ACGAACGGCAGCCTGGTGGCACCCAGCCCCAGCCCT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACTCCCTCAGGGTCTCTaGCGAGTACAGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGLPQGL*RVQANG
Trigger: CCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGTGAACTCTTCAGGGTaGCAAGAACGGCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCVNSSG*QERPMA
Trigger: AGCCATGGGCCGTTCTTGGCACCCTGAAGAGTTCAC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATTTCTGGGCTTCCAGGTaGGTCATGGTGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: CCGWPSEVPPAELYIVKHFWASR*VMVSVL
Trigger: CAACACAGACACCATGACCCACCTGGAAGCCCAGAA...ATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGCCCCTTCACCTCGATaGGCTTGTGGGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTAPSPR*ACGWTG
Trigger: CCCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACTCCATGATGGCATCCTaGGAATACATGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYSMMAS*EYMLMG
Trigger: GCCCATCAGCATGTATTCCCAGGATGCCATCATGGA...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCGTCAGCCTCATCTTCTaGCTTGTTCTGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: LGLLLPLQRALFRAALSSVSLIF*LVLALN
Trigger: ATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGAC...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCGTCAGCCTCATCTTCTaGCTTGTTCTGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISVSLIF*LVLALN
Trigger: ATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGAC...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAAGCGAGACTGCAGGTTaGAGGAACGGCGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGSETAG*RNGVPT
Trigger: AGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCCAATTTGGCAAAACGTaGGCTGTTACGTTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLQFGKT*AVTFRF
Trigger: GAAACGGAACGTAACAGCCCACGTTTTGCCAAATTG...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCCAATTTGGCAAAACGTaGGCTGTTACGTTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: LGLLLPLQRALFRAALSSQFGKT*AVTFRF
Trigger: GAAACGGAACGTAACAGCCCACGTTTTGCCAAATTG...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCCAATTTGGCAAAACGTaGGCTGTTACGTTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: ENYGASTHGTERRVHAPTQFGKT*AVTFRF
Trigger: GAAACGGAACGTAACAGCCCACGTTTTGCCAAATTG...GGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACATTTCCCTTGGTTCTaGGGTGTTATGCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: NYGASTHGTERRVHAPTSHFPWF*GVMPAN
Trigger: GTTTGCTGGCATAACACCCCAGAACCAAGGGAAATG...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAATCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKSASLP*GFYFLF
Trigger: GAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGA...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACACAGAAGAGAGAACTATaGAGCCAGCACACACGGTAC +
Preference number: 4 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTQKREL*SQHTRY
Trigger: GTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTG...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAAAGCAGGGGCTGTGGTaGAGGCGGAGGCGATGGCAG +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQKQGLW*RRRRWQ
Trigger: CTGCCATCGCCTCCGCCTCCACCACAGCCCCTGCTT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATGTAGCTGGTGTGGGTaGCAGGTGCTGAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGCSWCG*QVLKRR
Trigger: CCGCCTCTTCAGCACCTGCCACCCACACCAGCTACA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAATCTGTCACCCAGGGTaGACGGCTGGCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQICHPG*TAGRLR
Trigger: GCGGAGCCTGCCAGCCGTCCACCCTGGGTGACAGAT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGCACCTGAGGACCCGCTaGGGTGTAGGCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKHLRTR*GVGWAS
Trigger: GGAGGCCCAGCCTACACCCCAGCGGGTCCTCAGGTG...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGGGTCCCCCTGGCAAGTaGTGGCACCTGAGGACCCGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKGPPGK*WHLRTR
Trigger: GCGGGTCCTCAGGTGCCACCACTTGCCAGGGGGACC...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTTCTGGACGGTCCCCCTaGCAAGTGGTGGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTSGRSP*QVVAPE
Trigger: CTCAGGTGCCACCACTTGCCAGGGGGACCGTCCAGA...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTAGTCCGGCTGCTGGCTaGGAATCGCTCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTSPAAG*ESLSPL
Trigger: CAGAGGGCTGAGCGATTCCCAGCCAGCAGCCGGACT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGCAGTGACCGCAGAGTaGAGTCCGGCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQAVTAE*SPAAGW
Trigger: CCAGCCAGCAGCCGGACTCCACTCTGCGGTCACTGC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGGGGTCTGTCCTTCTTaGAGTAGAACGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFGVCPS*SRTAAP
Trigger: AGGGGCAGCCGTTCTACTCCAAGAAGGACAGACCCC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACTTCCTGATGCTCCCTaGGGGAGACTGGTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGLPDAP*GRLVAS
Trigger: CGAAGCCACCAGTCTCCCCCAGGGAGCATCAGGAAG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 72 bp ACCCTGCAGCGAGTGCTGTTTGGCACTTCAATTTGTTaGCCAGGGGAGCGCTTAAGAACTCCGCAGAATGCT +
Preference number: 4 (lower is better)
Translates to: TLQRVLFGTSIC*PGERLRTPQNA
Trigger: AGCATTCTGCGGAGTTCTTAAGCGCTCCCCTGGCAAACAAATTGAAGTGCCAAACAGCACTCGCTGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTCATGGTGTCTGTGTTaGCGCCGTCAATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFSWCLC*RRQWPP
Trigger: TGGTGGCCATTGACGGCGTCAACACAGACACCATGA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGCGTTGGCTGGAGAGTTaGCTACCACCTTCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SRVIHCQASPWGSHARSVRWLES*LPPSGE
Trigger: CTCACCAGAAGGTGGTAGTCAACTCTCCAGCCAACG...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263066.11
ENST00000372066.8
CDS-3UTR TCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGGATGCTGGCAGTGGTaGCAACCCGGGGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYGCWQW*QPGAWV
Trigger: CACCCAAGCCCCGGGTTGTCACCACTGCCAGCATCC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCATGACATTGTTGCAGTaGCCGCAGAGTGGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFMTLLQ*PQSGVR
Trigger: CCGGACTCCACTCTGCGGTCACTGCAACAATGTCAT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAGAAATGGGCCCCGGATaGCATTGTTGCAGTGACCGC +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGEMGPG*HCCSDR
Trigger: GCGGTCACTGCAACAATGTCATCCGGGGCCCATTTC...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTGCAGTAGGCACAGGTaGACTCTTCAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFCSRHR*TLQGAK
Trigger: CTTGGCACCCTGAAGAGTTCACCTGTGCCTACTGCA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTATCAAGGTCTGAAGTCTaGTGCGCAGAGGTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLSRSEV*CAEVAP
Trigger: TGGAGCTACCTCTGCGCATCAGACTTCAGACCTTGA...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGCCACCAAGCCTATTTaGGATGGAGGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGATKPI*DGGYWG
Trigger: CCCCCAGTACCCTCCATCTCAAATAGGCTTGGTGGC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAATCCATGTCCCTTCCTaGTGCTCCCTGGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGIHVPS*CSLGET
Trigger: AGTCTCCCCCAGGGAGCATCAGGAAGGGACATGGAT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTACACGGCCTTACTCCTaGCACTACACCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCTRPYS*HYTRLT
Trigger: TGTGAGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATGTAAGACATGCTGGTaGTGTCAGCGGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGCKTCW*CQRPPL
Trigger: CAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGCCTTGGGCTTGGGCCTaGCCAGCGATGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEPWAWA*PAMASM
Trigger: CATGGATGCCATCGCTGGGCAGGCCCAAGCCCAAGG...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAACCTTGGGCTTGGGCCTaGCCAGCGATGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQPWAWA*PAMASM
Trigger: CATGGATGCCATCGCTGGGCAGGCCCAAGCCCAAGG...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGGGGGTATAGGCTGGTaGTGGGGATGGAGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGGGIGW*WGWSVG
Trigger: ACCTACACTCCATCCCCAGCACCAGCCTATACCCCC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGTAGGCCACCGAGGGTaGAGGGTTATAGTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTVGHRG*RVIVGG
Trigger: GCCCCCAACTATAACCCTGCACCCTCGGTGGCCTAC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTATTCTGGGCTTCCAGGTaGGTCATGGTGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLFWASR*VMVSVL
Trigger: CAACACAGACACCATGACCCACCTGGAAGCCCAGAA...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTGTACTGCGCATGGGACTTGATCTTGTTCTaGGCTTCCAGGTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: SMMASWEYMLMGVLYCAWDLILF*ASRWVM
Trigger: CATGACCCACCTGGAAGCCCAGAACAAGATCAAGTC...CCATGCGCAGTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp GCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCGTGGAGATGGGAATaGGACGCTTTGATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: APSRVIHCQASPWGSHARSWRWE*DALISA
Trigger: TGCAGAAATCAAAGCGTCCCATTCCCATCTCCACGA...TCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGTGCTGTCGTGGAGATaGGAATGGGACGCTTTGATT +
Preference number: 4 (lower is better)
Translates to: VGHQRCPQQSYTLSSITVVLSWR*EWDALI
Trigger: AATCAAAGCGTCCCATTCCCATCTCCACGACAGCAC...CACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACAGAGGGGTCTGGACTaGAGGTGCTGTCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGQRGLD*RCCRGD
Trigger: ATCTCCACGACAGCACCTCCAGTCCAGACCCCTCTG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGTAGTCGGCGTTGGCTaGAGAGTTGACTACCACCTT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCVVGVG*RVDYHL
Trigger: AAGGTGGTAGTCAACTCTCCAGCCAACGCCGACTAC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTTCTGTCCCCGTCATCTaGGCCAGGATGCGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTSVPVI*ARMRKE
Trigger: CTCCTTCCGCATCCTGGCCCAGATGACGGGGACAGA...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGCAATTTGGCAAAACGTaGGCTGTTACGTTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQQFGKT*AVTFRF
Trigger: GAAACGGAACGTAACAGCCCACGTTTTGCCAAATTG...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGACATTTCCCTTGGTTCTaGGGTGTTATGCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: APSRVIHCQASPWGSHARHFPWF*GVMPAN
Trigger: GTTTGCTGGCATAACACCCCAGAACCAAGGGAAATG...TCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GCTGTCTACGGCAAGGTCCTTAATAGGGAGGCTCCCACTGAAGTCACTGCCTTGCATTTCCCTTGGTTCTaGGGTGTTATGCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: AVYGKVLNREAPTEVTALHFPWF*GVMPAN
Trigger: GTTTGCTGGCATAACACCCCAGAACCAAGGGAAATG...CAAGGCAGTGACTTCAGTGGGAGCCTCCCTATTAAGGACCTTGCCGTAGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp GTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTCTGCCTCATTACCCTaGGGCTTCTACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VIHCQASPWGSHARSVWGSASLP*GFYFLF
Trigger: GAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGA...CCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTTTATATTGCCTCGGCTaGCTCGAGCCCGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTLYCLG*LEPGRA
Trigger: AGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAA...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAGGTAGATGCAGGCACTaGCTGGTAGACAGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGGRCRH*LVDRRP
Trigger: CGGCCTTCTGTCTACCAGCCAGTGCCTGCATCTACC...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCACTGTAATTGGCCCCTaGGGACGGGCTGTAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFTVIGP*GRAVGR
Trigger: TCTACCTACAGCCCGTCCCCAGGGGCCAATTACAGT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAAGGGGGTGTAGGGAGTaGGACTGTAATTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGRGCRE*DCNWPL
Trigger: CAGGGGCCAATTACAGTCCCACTCCCTACACCCCCT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGCAGTGACCGCAGAGTaGAGTCCGGCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYAVTAE*SPAAGW
Trigger: CCAGCCAGCAGCCGGACTCCACTCTGCGGTCACTGC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGCCAAGAACGGCCCATaGCTACCAGAAATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTAKNGP*LPEMGP
Trigger: GGGGCCCATTTCTGGTAGCCATGGGCCGTTCTTGGC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAGGGAAATCGCAGCCATaGCACTTGGTGCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLGKSQP*HLVLNR
Trigger: TCTGTTCAGCACCAAGTGCCATGGCTGCGATTTCCC...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCGCAGCGAGTGCTGTTTaGCACTTCAATTTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSAASAV*HFNLFA
Trigger: GGCAAACAAATTGAAGTGCCAAACAGCACTCGCTGC...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCGTGAGGAAAGCCCAATaGGTCTTAGCTAACAAGCTC +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSVRKAQ*VLANKL
Trigger: GAGCTTGTTAGCTAAGACCCATTGGGCTTTCCTCAC...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTATGTAGCTGGCAGACTTaGTCTTGTTCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLCSWQT*SCSGLP
Trigger: TGGAAGCCCAGAACAAGATCAAGTCTGCCAGCTACA...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATGGCCGCCTACAAGTTaGTGGTGTGTGCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGWPPTS*WCVRAS
Trigger: AGAAGCACGCACACACCATCAACTTGTAGGCGGCCA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTTGGATGTTTCAGACTaGGAGAGGGTGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFLDVSD*ERVADR
Trigger: CCTGTCAGCCACCCTCTCTCAGTCTGAAACATCCAA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATCACACTGTAAGACATaGTGGTGCTGTCAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGSHCKT*WCCQRP
Trigger: CGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAGGTCTGGACTGGAGGTaGTGTCGTGGAGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGGLDWR*CRGDGN
Trigger: ATTCCCATCTCCACGACAGCACCTCCAGTCCAGACC...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACA +
Preference number: 4 (lower is better)
Translates to: SRVIHCQASPWGSHARSVVGHQR*PQQSYT
Trigger: TGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCACGAAGCAGGTGGTGTaGCATGTCTGTCTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFTKQVV*HVCLKA
Trigger: TGCCTTGAGACAGACATGGCACACCACCTGCTTCGT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTTGATGGTGTGTGCGTaGTTCTTGCACAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFLMVCA*FLHRGL
Trigger: CAGACCCCTGTGCAAGAAGCACGCACACACCATCAA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATCCCGAATCCTTTGTTaGCAGCAGCAGGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGSRILC*QQQEQL
Trigger: GAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCAGATTCTCCACAGCTaGTCTAAGCTCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCQILHS*SKLCPP
Trigger: AGGAGGACAGAGCTTAGAGCAGCTGTGGAGAATCTG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCAAGAACTCCGCAGAATaGTTCAGATTCTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSKNSAE*FRFSTA
Trigger: AGCTGTGGAGAATCTGAAGCATTCTGCGGAGTTCTT...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCTTTTCTCAGCTGTCTaGAACCTGAGCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFLFSAV*NLSQSP
Trigger: AGGGCTCTGGCTCAGGTTGCAGACAGCTGAGAAAAG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAGAAGGTGGGAGGTCCTaGCTCCTCGTGTGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGEGGRS*LLVCSY
Trigger: GTAAGAACACACGAGGAGGCAGGACCTCCCACCTTC...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTAGGGACATAGCTAGCTaGTTCCTTCTCCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCRDIAS*FLLPHG
Trigger: TCCATGAGGGAGAAGGAAGCAGCTAGCTATGTCCCT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGACTTGATCTTGTTCTaGGCTTCCAGGTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQDLILF*ASRWVM
Trigger: CATGACCCACCTGGAAGCCCAGAACAAGATCAAGTC...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTCGTGGAGATGGGAATaGGACGCTTTGATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PQQSYTLSSITVGLTCQISWRWE*DALISA
Trigger: TGCAGAAATCAAAGCGTCCCATTCCCATCTCCACGA...GATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGACCGGCAGAGGGGTCTaGACTGGAGGTGCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKTGRGV*TGGAVV
Trigger: CACGACAGCACCTCCAGTCCAGACCCCTCTGCCGGT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGCGATGGGCTTGTGGGTaGACAGGGCCGAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LYVQKRELWSQHTRYRKERWACG*TGPSPS
Trigger: TGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCG...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGCTGAAGTCACTGCCTTaGGCTTGGGCCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKLKSLP*AWACPA
Trigger: CGCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAG...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAATCTGTCCCCGTCATCTaGGCCAGGATGCGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQSVPVI*ARMRKE
Trigger: CTCCTTCCGCATCCTGGCCCAGATGACGGGGACAGA...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCCAGTTGCGCAATTTaGCAAAACGTGGGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQASCAI*QNVGCY
Trigger: GTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGC...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTTTAACATTAAGGATTTaGGCTGAAAGGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: TTARRGLCLITLGLLLPLLTLRI*AERPWC
Trigger: GCACCATGGCCTTTCAGCCCAAATCCTTAATGTTAA...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGGCCCTCACTGTAGCTaGTGTGGGTGGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYGPHCS*CGWQVL
Trigger: CAGCACCTGCCACCCACACCAGCTACAGTGAGGGCC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCACCTGAGGACCCGCTaGGGTGTAGGCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFHLRTR*GVGWAS
Trigger: GGAGGCCCAGCCTACACCCCAGCGGGTCCTCAGGTG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCATGGCTACCAGAAATaGGCCCCGGATGACATTGTT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCHGYQK*APDDIV
Trigger: AACAATGTCATCCGGGGCCCATTTCTGGTAGCCATG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTTTTTGGTGTTGCACTTaGCACACAGCGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCFWCCT*HTAGQR
Trigger: TCTTTGCCCCGCTGTGTGCCAAGTGCAACACCAAAA...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTATCCCCGTCTTCCATGTaGAAGAGGCTGTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLSPSSM*KRLFPK
Trigger: TTTTGGGAACAGCCTCTTCCACATGGAAGACGGGGA...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGGGAAATCGCAGCCATaGCACTTGGTGCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFGKSQP*HLVLNR
Trigger: TCTGTTCAGCACCAAGTGCCATGGCTGCGATTTCCC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCATTCATGCACACGACTaGACACTCATGCTAACGAAC +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSIHAHD*TLMLTN
Trigger: GTTCGTTAGCATGAGTGTCCAGTCGTGTGCATGAAT...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGTGTACTGCGCATGGATaGTGGTGGCCTTGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKCTAHG*WWPCRP
Trigger: TGGGCGGCAAGGCCACCATCATCCATGCGCAGTACA...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTATGACATTGTTGCAGTaGCCGCAGAGTGGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTMTLLQ*PQSGVR
Trigger: CCGGACTCCACTCTGCGGTCACTGCAACAATGTCAT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGGGAGACGTCATAAGTaGGCAGTCACAAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGGRRHK*AVTSWG
Trigger: ACCCCAACTTGTGACTGCTCACTTATGACGTCTCCC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACAGAGTTTGGGCATGTaGGCCTATTCTGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGQSLGM*AYSAIL
Trigger: CAGGATGGCAGAATAGGCTCACATGCCCAAACTCTG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTCTTGTCTGCAGCTCCTaGCAAATCTCCAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTLVCSS*QISRQS
Trigger: GGACTGCCTGGAGATTTGTCAGGAGCTGCAGACAAG...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCTGGTTTCAAACTCCTaGCCTCAGGTGATTCACCTG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFLVSNS*PQVIHL
Trigger: CAGGTGAATCACCTGAGGTCAGGAGTTTGAAACCAG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTATGGGCGTGTTGTACTaGGCATGGATGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTMGVLY*AWMMVA
Trigger: GGCCACCATCATCCATGCGCAGTACAACACGCCCAT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR GCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAATCTTCATCAGGGTCTTaGATGAATTCTGTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQSSSGS*MNSVPV
Trigger: GACGGGGACAGAATTCATGCAAGACCCTGATGAAGA...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTATGGGGTTGTTATATTaGCTCGGCTGGCTCGAGCCC +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTMGLLY*LGWLEP
Trigger: GGGCTCGAGCCAGCCGAGGCAATATAACAACCCCAT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAACGGGCTGTAGGTAGATaGAGGCACTGGCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQRAVGR*RHWLVD
Trigger: GTCTACCAGCCAGTGCCTGCATCTACCTACAGCCCG...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAACGAAGCAGGTGGTGTaGCATGTCTGTCTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGTKQVV*HVCLKA
Trigger: TGCCTTGAGACAGACATGGCACACCACCTGCTTCGT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAATGAAGCAGGTGTCGTaGCAAGTGTGGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQMKQVS*QVWPRA
Trigger: AGCCCTGGGCCACACTTGGCACGACACCTGCTTCAT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTGATGGTGTGTGCGTaGTTCTTGCACAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGLMVCA*FLHRGL
Trigger: CAGACCCCTGTGCAAGAAGCACGCACACACCATCAA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACAAGTTGATGGTGTGTaGGTGCTTCTTGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGQVDGV*VLLAQG
Trigger: CCCCTGTGCAAGAAGCACGCACACACCATCAACTTG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAATGGAGCCCTGGCAATTaGCCAGTGGCTCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQWSPGN*PVAPRR
Trigger: TCTTCTGGGAGCCACTGGGCAATTGCCAGGGCTCCA...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACTTTTCTCAGCTGTCTaGAACCTGAGCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGLFSAV*NLSQSP
Trigger: AGGGCTCTGGCTCAGGTTGCAGACAGCTGAGAAAAG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAACACTGTAAGACATGCTaGTGCTGTCAGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQHCKTC*CCQRPP
Trigger: AGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTG...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTTCGTGGAGATGGGAATaGGACGCTTTGATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCSWRWE*DALISA
Trigger: TGCAGAAATCAAAGCGTCCCATTCCCATCTCCACGA...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCGTCAGCCTCATCTTCTaGCTTGTTCTGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: PQQSYTLSSITVGLTCQIVSLIF*LVLALN
Trigger: ATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGAC...GATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGAGCGAGACTGCAGGTTaGAGGAACGGCGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKSETAG*RNGVPT
Trigger: AGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACTTAACATTAAGGATTTaGGCTGAAAGGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYLTLRI*AERPWC
Trigger: GCACCATGGCCTTTCAGCCCAAATCCTTAATGTTAA...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCAAGGGAGGCTCCCTCCTaGGAGTCCGACACCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPREAPS*ESDTRG
Trigger: GCCTCGGGTGTCGGACTCCCAGGAGGGAGCCTCCCT...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623007.3
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGAGGCGATGGCAGTGTaGGCAGCAGCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFEAMAV*AAAVAR
Trigger: CCTGGCCACAGCTGCTGCCCACACTGCCATCGCCTC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATTGTAGCTGGTGTGGGTaGCAGGTGCTGAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYCSWCG*QVLKRR
Trigger: CCGCCTCTTCAGCACCTGCCACCCACACCAGCTACA...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGAGTGGGACTGTAATTaGCCCCTGGGGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYEWDCN*PLGTGC
Trigger: ACAGCCCGTCCCCAGGGGCCAATTACAGTCCCACTC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACCCGGGGCAAACTTCTaGGAGAAGCTATCATCTGTC +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGPGANF*EKLSSV
Trigger: GACAGATGATAGCTTCTCCCAGAAGTTTGCCCCGGG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACACAGACGAAGCAGGTaGTGTGCCATGTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGHRRSR*CAMSVS
Trigger: TGAGACAGACATGGCACACCACCTGCTTCGTCTGTG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCCCTCCAGATTCACATaGCAGACTGCGCAAATGAAG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFPSRFT*QTAQMK
Trigger: CTTCATTTGCGCAGTCTGCCATGTGAATCTGGAGGG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACAGAAGACATCTCTTTaGACGTCCGGGCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGQKTSL*TSGLPR
Trigger: TCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCTG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACAGACTGAGAGAGGGTaGCTGACAGGGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGQTERG*LTGPSF
Trigger: AAAAGATGGCCCTGTCAGCCACCCTCTCTCAGTCTG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTAAGAGACAGGTAAGATaGCAATCCCCTGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCKRQVR*QSPGSL
Trigger: GAGACTTCCAGGGGATTGCCATCTTACCTGTCTCTT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGGGGTTTCACCATATTaGCCAGGCTGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCGVSPY*PGWFQT
Trigger: AGTTTGAAACCAGCCTGGCCAATATGGTGAAACCCC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 72 bp ATTTGGGCTGAAAGGCCATGGTGCCAGTTGCGCAATTaGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: IWAERPWCQLRN*AKRGLLRSVSN
Trigger: GTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
3UTR CAA 72 bp ACATTAAGGATTTGGGCTGAAAGGCCATGGTGCCAGTaGCGCAATTTGGCAAAACGTGGGCTGTTACGTTCC +
Preference number: 4 (lower is better)
Translates to: TLRIWAERPWCQ*RNLAKRGLLRS
Trigger: GGAACGTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCAAATCCTTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAATCATGGTGTCTGTGTTaGCGCCGTCAATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQSWCLC*RRQWPP
Trigger: TGGTGGCCATTGACGGCGTCAACACAGACACCATGA...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGGCGGGGTCCTTCTGGTaGGGGATCACCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMEAGSFW*GITGRG
Trigger: CCCTCTGCCGGTGATCCCTCACCAGAAGGACCCCGC...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAACTCATCTGGTACATCTaGGCCATCTCCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQLIWYI*AISLRV
Trigger: GACCCTGAGGGAGATGGCTCAGATGTACCAGATGAG...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR TCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGAAATGGGCCCCGGATaGCATTGTTGCAGTGACCGC +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYEMGPG*HCCSDR
Trigger: GCGGTCACTGCAACAATGTCATCCGGGGCCCATTTC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGGCAGACTGCGCAAATaGAGCAGGTGTCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYGRLRK*SRCRAK
Trigger: CTTGGCACGACACCTGCTTCATTTGCGCAGTCTGCC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTTCAAGGTCTGAAGTCTaGTGCGCAGAGGTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTSRSEV*CAEVAP
Trigger: TGGAGCTACCTCTGCGCATCAGACTTCAGACCTTGA...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTCAGAGTTTGGGCATGTaGGCCTATTCTGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTQSLGM*AYSAIL
Trigger: CAGGATGGCAGAATAGGCTCACATGCCCAAACTCTG...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTAATATCGTGCTCAAGTaGGAAACATCCACGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCNIVLK*ETSTQV
Trigger: CACTTGCGTGGATGTTTCTCACTTGAGCACGATATT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCAGACTCACAGACACTaGGTGAACCACACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFQTHRH*VNHTQN
Trigger: GTTTTGAGTGTGGTTCACTCAGTGTCTGTGAGTCTG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACTGGTTTCAAACTCCTaGCCTCAGGTGATTCACCTG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGLVSNS*PQVIHL
Trigger: CAGGTGAATCACCTGAGGTCAGGAGTTTGAAACCAG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTTGTTCTGTCCCTTGCTaGCCAGCCGGGCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFCSVPC*PAGLRG
Trigger: TCCACGCAGCCCGGCTGGGCAGCAAGGGACAGAACA...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCTCTGTTCTGTCCCTTaGTGCCCAGCCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFLCSVP*CPAGLR
Trigger: ACGCAGCCCGGCTGGGCAGCAAGGGACAGAACAGAG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTCTTCATCAGGGTCTTaGATGAATTCTGTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFSSSGS*MNSVPV
Trigger: GACGGGGACAGAATTCATGCAAGACCCTGATGAAGA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGATGGGGTTGTTATATTaGCTCGGCTGGCTCGAGCCC +
Preference number: 4 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEMGLLY*LGWLEP
Trigger: GGGCTCGAGCCAGCCGAGGCAATATAACAACCCCAT...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGGGGGTATAGGCTGGTaGTGGGGATGGAGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYGGIGW*WGWSVG
Trigger: ACCTACACTCCATCCCCAGCACCAGCCTATACCCCC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGTGAACTCTTCAGGGTaGCAAGAACGGCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQVNSSG*QERPMA
Trigger: AGCCATGGGCCGTTCTTGGCACCCTGAAGAGTTCAC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AATGAAACTTTGTTCGACTGTGATGTATCGAGGCATCATGGTGTTTGCCAGCTTATGAAGCAGGTGTCGTaGCAAGTGTGGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NETLFDCDVSRHHGVCQLMKQVS*QVWPRA
Trigger: AGCCCTGGGCCACACTTGGCACGACACCTGCTTCAT...AAGCTGGCAAACACCATGATGCCTCGATACATCACAGTCGAACAAAGTTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR GCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCCCACAGAATCTAAGCTaGCTTCTTTATCACCAAACA +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSPQNLS*LLYHQT
Trigger: TGTTTGGTGATAAAGAAGGCAGCTTAGATTCTGTGG...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCAAGTGCCTGCTTCAATaGCATGTTTTCAATGAGCAT +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSKCLLQ*HVFNEH
Trigger: ATGCTCATTGAAAACATGGCATTGAAGCAGGCACTT...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTAAACATCCACGCAAGTaGCTGCTTCAATGCCATGTT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCKHPRK*LLQCHV
Trigger: AACATGGCATTGAAGCAGGCACTTGCGTGGATGTTT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCCAACCTCCTTGTCCCTaGATATTTGAACTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSQPPCP*IFELSK
Trigger: TTTGGAAAGTTCAAATATGCAGGGACAAGGAGGTTG...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGTGCTGTCGTGGAGATaGGAATGGGACGCTTTGATT +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGVLSWR*EWDALI
Trigger: AATCAAAGCGTCCCATTCCCATCTCCACGACAGCAC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTACCGGCAGAGGGGTCTaGACTGGAGGTGCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFTGRGV*TGGAVV
Trigger: CACGACAGCACCTCCAGTCCAGACCCCTCTGCCGGT...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTTCACTGCCTTGGGCTTaGGCCTGCCCAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFSLPWA*ACPAMA
Trigger: TGCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGA...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGTCAGCCTCATCTTCTaGCTTGTTCTGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCVSLIF*LVLALN
Trigger: ATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGAC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAACAATTTGGCAAAACGTaGGCTGTTACGTTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQQFGKT*AVTFRF
Trigger: GAAACGGAACGTAACAGCCCACGTTTTGCCAAATTG...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TGCCCACTCGTCAGCCTCATCTTCTGGCTTGTTCTGGCTCTTAATCACAGCCTGTTAACATTAAGGATTTaGGCTGAAAGGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: CPLVSLIFWLVLALNHSLLTLRI*AERPWC
Trigger: GCACCATGGCCTTTCAGCCCAAATCCTTAATGTTAA...CAGGCTGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGACGAGTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACCGAGTACAGGCCAATaGGGTTGTTATATTGCCTCG +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGPSTGQ*GCYIAS
Trigger: CGAGGCAATATAACAACCCCATTGGCCTGTACTCGG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATTTTGGTGTTGCACTTaGCACACAGCGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGFWCCT*HTAGQR
Trigger: TCTTTGCCCCGCTGTGTGCCAAGTGCAACACCAAAA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGCAAGTGTATCGCTTTaGGAAAGCTGCTTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCASVSL*ESCLLL
Trigger: AAGCAACAAGCAGCTTTCCCAAAGCGATACACTTGC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCCCTTCCTGGAGCCCTaGCAATTGCCCAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFPFLEP*QLPSGS
Trigger: GGAGCCACTGGGCAATTGCCAGGGCTCCAGGAAGGG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCTCCCTGGGGGAGACTaGTGGCTTCGTGCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYLPGGD*WLRAWK
Trigger: TTTCCAAGCACGAAGCCACCAGTCTCCCCCAGGGAG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 72 bp CAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTaGTATTCACCTTCTCACAGATCCAAAGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: QAVPADFTLPAA*YSPSHRSKGRK
Trigger: CTTCCTACCTTTGGATCTGTGAGAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTTGTAGCTGGCAGACTTaGTCTTGTTCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTCSWQT*SCSGLP
Trigger: TGGAAGCCCAGAACAAGATCAAGTCTGCCAGCTACA...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGCGTTGGCTGGAGAGTTaGCTACCACCTTCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKRWLES*LPPSGE
Trigger: CTCACCAGAAGGTGGTAGTCAACTCTCCAGCCAACG...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR TCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTATTTGGCTCCTAGTCTaGACTATGCAAATGCACGAT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCIWLLV*TMQMHD
Trigger: ATCGTGCATTTGCATAGTTCAGACTAGGAGCCAAAT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAAGTTTGTTCAAGGTCTaGAGTCTGATGCGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGSLFKV*SLMRRG
Trigger: ACCTCTGCGCATCAGACTTCAGACCTTGAACAAACT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCGGTGAAACCGTCCTTTaGGATATTTTACTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSGETVL*DILLFF
Trigger: GAAGAAAAGTAAAATATCTCAAAGGACGGTTTCACC...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACTCACAGACACTGAGTaGACCACACTCAAAACTACC +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGLTDTE*TTLKTT
Trigger: GGTAGTTTTGAGTGTGGTTCACTCAGTGTCTGTGAG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATCTTCATCAGGGTCTTaGATGAATTCTGTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGSSSGS*MNSVPV
Trigger: GACGGGGACAGAATTCATGCAAGACCCTGATGAAGA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGTAGGCCACCGAGGGTaGAGGGTTATAGTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFVGHRG*RVIVGG
Trigger: GCCCCCAACTATAACCCTGCACCCTCGGTGGCCTAC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACACAAAGCACACATCTaGCAGGGAAGTCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGHKAHI*QGSLAV
Trigger: TACTGCAAGACTTCCCTGGCAGATGTGTGCTTTGTG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATTCCCAAAAGGCTTCTTaGAGGCCGCACAGACGAAGC +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYSQKAS*RPHRRS
Trigger: GCTTCGTCTGTGCGGCCTGCAAGAAGCCTTTTGGGA...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GAAACTTTGTTCGACTGTGATGTATCGAGGCATCATGGTGTTTGCCAGCTTTTATCCCAAAAGGCTTCTTaGAGGCCGCACAGACGAAGC +
Preference number: 4 (lower is better)
Translates to: ETLFDCDVSRHHGVCQLLSQKAS*RPHRRS
Trigger: GCTTCGTCTGTGCGGCCTGCAAGAAGCCTTTTGGGA...TAAAAGCTGGCAAACACCATGATGCCTCGATACATCACAGTCGAACAAAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATGTAGCTCCAAAGTGTaGTCCCCACCATGGATTATG +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGCSSKV*SPPWIM
Trigger: CATAATCCATGGTGGGGAGCACACTTTGGAGCTACA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCACTGCAGATATAAGCTaGAGATATAAGTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: PQKKHQPPESFVASSRSSTADIS*RYKSLH
Trigger: ATGGAGTGACTTATATCTGCAGCTTATATCTGCAGT...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATCGTGGAGATGGGAATaGGACGCTTTGATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGSWRWE*DALISA
Trigger: TGCAGAAATCAAAGCGTCCCATTCCCATCTCCACGA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGTGCTGTCGTGGAGATaGGAATGGGACGCTTTGATT +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTVLSWR*EWDALI
Trigger: AATCAAAGCGTCCCATTCCCATCTCCACGACAGCAC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCGATGGGCTTGTGGGTaGACAGGGCCGAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFRWACG*TGPSPS
Trigger: TGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCAGCCCCTTCACCTCGATaGGCTTGTGGGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPAPSPR*ACGWTG
Trigger: CCCTGTCCACCCACAAGCCCATCGAGGTGAAGGGGC...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTTCCATGATGGCATCCTaGGAATACATGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTSMMAS*EYMLMG
Trigger: GCCCATCAGCATGTATTCCCAGGATGCCATCATGGA...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGTGGGCTGAAAGGCCATaGTGCCAGTTGCGCAATTTG +
Preference number: 4 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEWAERP*CQLRNL
Trigger: CAAATTGCGCAACTGGCACCATGGCCTTTCAGCCCA...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAATTAACATTAAGGATTTaGGCTGAAAGGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQLTLRI*AERPWC
Trigger: GCACCATGGCCTTTCAGCCCAAATCCTTAATGTTAA...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGGGGCTACGGGCTATTTaGGGGGTGGCGAGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMEGLRAI*GVARVA
Trigger: GGCAACCCTCGCCACCCCCCAAATAGCCCGTAGCCC...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGTGCAGGGTTATAGTTaGGGGCAGGTGAGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYVQGYS*GQVRGY
Trigger: ATACCCCCTCACCTGCCCCCAACTATAACCCTGCAC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAACCCGGGGCAAACTTCTaGGAGAAGCTATCATCTGTC +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQPGANF*EKLSSV
Trigger: GACAGATGATAGCTTCTCCCAGAAGTTTGCCCCGGG...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTAATCGCTCAGCCCTCTaGACGGTCCCCCTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFNRSAL*TVPLAS
Trigger: ACTTGCCAGGGGGACCGTCCAGAGGGCTGAGCGATT...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAACACAGACGAAGCAGGTaGTGTGCCATGTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQHRRSR*CAMSVS
Trigger: TGAGACAGACATGGCACACCACCTGCTTCGTCTGTG...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCAAGATGGCAATCCCCTaGAAGTCTCAGTCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFKMAIP*KSQSLE
Trigger: TTCTAAGGACTGAGACTTCCAGGGGATTGCCATCTT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAAAGAGACAGGTAAGATaGCAATCCCCTGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGKRQVR*QSPGSL
Trigger: GAGACTTCCAGGGGATTGCCATCTTACCTGTCTCTT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGTCTGTCCTCCTCTGGTaGCCAAAGCAAGTGTATCGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKSVLLW*PKQVYR
Trigger: GCGATACACTTGCTTTGGTCACCAGAGGAGGACAGA...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAGAGGACAGAATAGAGTaGGTTGGAAGAGAGCCTAAA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGEDRIE*VGREPK
Trigger: TTTAGGCTCTCTTCCAACTCACTCTATTCTGTCCTC...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGTGCACACCGGCGCATaGTCAATAGGGGTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFVHTGA*SIGVLD
Trigger: GTCAAGCACCCCTATTGAGCATGCGCCGGTGTGCAC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCAAGTTGATGGTGTGTaGGTGCTTCTTGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYQVDGV*VLLAQG
Trigger: CCCCTGTGCAAGAAGCACGCACACACCATCAACTTG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAGGGAAAGCTGCTTGTTaGTTTTCACTTTTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLGKAAC*FSLLSS
Trigger: AGAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCC...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAACTCTAAAAATACCCTaGAGCGAGTGCTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGTLKIP*SECCLA
Trigger: TGCCAAACAGCACTCGCTGCAGGGTATTTTTAGAGT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACATGTGAGCCTATTCTaGCATCCTGTTTCAGACACT +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGHVSLF*HPVSDT
Trigger: AGTGTCTGAAACAGGATGGCAGAATAGGCTCACATG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCCACAGAATCTAAGCTaGCTTCTTTATCACCAAACA +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCPQNLS*LLYHQT
Trigger: TGTTTGGTGATAAAGAAGGCAGCTTAGATTCTGTGG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCAACCTCCTTGTCCCTaGATATTTGAACTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCQPPCP*IFELSK
Trigger: TTTGGAAAGTTCAAATATGCAGGGACAAGGAGGTTG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp ATTAGGAATGAAACTTTGTTCGACTGTGATGTATCGAGGCATCATGGTGTTTGCCCACTTCCTCCCTCCTaGCTCTTCTCAGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: IRNETLFDCDVSRHHGVCPLPPS*LFSESQ
Trigger: CTGGCTTTCTGAGAAGAGGCAGGAGGGAGGAAGTGG...GCAAACACCATGATGCCTCGATACATCACAGTCGAACAAAGTTTCATTCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCACTGTAAGACATGCTaGTGCTGTCAGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFHCKTC*CCQRPP
Trigger: AGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCAAGCGAGACTGCAGGTTaGAGGAACGGCGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPSETAG*RNGVPT
Trigger: AGTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCT...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCATGGCGAGGGTTGCCCTaGGGAGGTTTGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPWRGLP*GGLVGT
Trigger: TGTACCCACCAAACCTCCCCAGGGCAACCCTCGCCA...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTAGGGGGTGTAGGGAGTaGGACTGTAATTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFRGCRE*DCNWPL
Trigger: CAGGGGCCAATTACAGTCCCACTCCCTACACCCCCT...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TGGTGTTTGCCAGCTTTTAAAAATGATCAGGATGTCAGAAAGCTAGCGTGGCAAGGGAAATCGCAGCCATaGCACTTGGTGCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: WCLPAFKNDQDVRKLAWQGKSQP*HLVLNR
Trigger: TCTGTTCAGCACCAAGTGCCATGGCTGCGATTTCCC...TTGCCACGCTAGCTTTCTGACATCCTGATCATTTTTAAAAGCTGGCAAACACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCAGACTGAGAGAGGGTaGCTGACAGGGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYQTERG*LTGPSF
Trigger: AAAAGATGGCCCTGTCAGCCACCCTCTCTCAGTCTG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAACCACAGAGCAAAACTaGAAAAACCCAACTCTACTT +
Preference number: 4 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLTTEQN*KNPTLL
Trigger: AAGTAGAGTTGGGTTTTTCCAGTTTTGCTCTGTGGT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTACCACAGAGCAAAACTaGAAAAACCCAACTCTACTT +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCTTEQN*KNPTLL
Trigger: AAGTAGAGTTGGGTTTTTCCAGTTTTGCTCTGTGGT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAATTCATGCACACGACTaGACACTCATGCTAACGAAC +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGIHAHD*TLMLTN
Trigger: GTTCGTTAGCATGAGTGTCCAGTCGTGTGCATGAAT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGCAAGCCTATTTGAGATaGAGGGTACTGGGGGAGACG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKQAYLR*RVLGET
Trigger: CGTCTCCCCCAGTACCCTCCATCTCAAATAGGCTTG...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAAAGATGGCAATCCCCTaGAAGTCTCAGTCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGKMAIP*KSQSLE
Trigger: TTCTAAGGACTGAGACTTCCAGGGGATTGCCATCTT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCTCCCTGGGGGAGACTaGTGGCTTCGTGCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFLPGGD*WLRAWK
Trigger: TTTCCAAGCACGAAGCCACCAGTCTCCCCCAGGGAG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGTAGGAAGGGCCCTGTaGCAGGAGCACATCCATGTC +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFVGRAL*QEHIHV
Trigger: GACATGGATGTGCTCCTGCCACAGGGCCCTTCCTAC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCTAGTTTTGTCTTTTTaGCAAATAGGAGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPRVWACEPILPSCFRHCLVLSF*QIGVPQ
Trigger: CTGAGGGACTCCTATTTGCCAAAAAGACAAAACTAG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGGGGTTTCACCATATTaGCCAGGCTGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTGVSPY*PGWFQT
Trigger: AGTTTGAAACCAGCCTGGCCAATATGGTGAAACCCC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATTTGATTTCTGCAGGGTaGGGCTCAAGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYLISAG*GSSCSW
Trigger: CCAGCTACAACTTGAGCCTCACCCTGCAGAAATCAA...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGAGGACAGAATAGAGTaGGTTGGAAGAGAGCCTAAA +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTEDRIE*VGREPK
Trigger: TTTAGGCTCTCTTCCAACTCACTCTATTCTGTCCTC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCAAAGGGTAGAGAGGGTTaGGTGAGAGGGCACTCAGGC +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPKGREG*VRGHSG
Trigger: GCCTGAGTGCCCTCTCACTCAACCCTCTCTACCCTT...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372066.8
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGGACGCTTTGATTTCTaGAGGGTGAGGCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYGRFDF*RVRLKL
Trigger: CAACTTGAGCCTCACCCTGCAGAAATCAAAGCGTCC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCAGTACAGAAAGGAGGGTaGATGCCCCCACCTCACCAC +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPVQKGG*MPPPHH
Trigger: GTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTAC...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GAGGCATCATGGTGTTTGCCAGCTTTTAAAAATGATCAGGATGTCAGAAAGCTAACGAAGCAGGTGGTGTaGCATGTCTGTCTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: EASWCLPAFKNDQDVRKLTKQVV*HVCLKA
Trigger: TGCCTTGAGACAGACATGGCACACCACCTGCTTCGT...TAGCTTTCTGACATCCTGATCATTTTTAAAAGCTGGCAAACACCATGATGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTCTGAACTATGCAAATaGACGATCTGTGTACAGAAG +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFSELCK*TICVQK
Trigger: CTTCTGTACACAGATCGTGCATTTGCATAGTTCAGA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTAAACATCCACGCAAGTaGCTGCTTCAATGCCATGTT +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTKHPRK*LLQCHV
Trigger: AACATGGCATTGAAGCAGGCACTTGCGTGGATGTTT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACAGCAGATTTTACTCTaGCTGCTGCTTTGTATTCAC +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGQQILL*LLLCIH
Trigger: GTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCCCAAAAATAACAGAATaGTCCAAGGTACTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFPKITE*SKVLVC
Trigger: GCAGACAAGTACCTTGGAGCATTCTGTTATTTTTGG...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAATGTAGCTCCAAAGTGTaGTCCCCACCATGGATTATG +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQCSSKV*SPPWIM
Trigger: CATAATCCATGGTGGGGAGCACACTTTGGAGCTACA...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGACTTGATCTTGTTCTaGGCTTCCAGGTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYDLILF*ASRWVM
Trigger: CATGACCCACCTGGAAGCCCAGAACAAGATCAAGTC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCGATGGGCTTGTGGGTaGACAGGGCCGAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMERWACG*TGPSPS
Trigger: TGAAGGACTCGGCCCTGTCCACCCACAAGCCCATCG...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTACTGTAATTGGCCCCTaGGGACGGGCTGTAGGTAGA +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFTVIGP*GRAVGR
Trigger: TCTACCTACAGCCCGTCCCCAGGGGCCAATTACAGT...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TGTGATGTATCGAGGCATCATGGTGTTTGCCAGCTTTTAAAAATGATCAGGATGCACAGACGAAGCAGGTaGTGTGCCATGTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: CDVSRHHGVCQLLKMIRMHRRSR*CAMSVS
Trigger: TGAGACAGACATGGCACACCACCTGCTTCGTCTGTG...CATCCTGATCATTTTTAAAAGCTGGCAAACACCATGATGCCTCGATACATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR CCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGCAGCGAGTGCTGTTTaGCACTTCAATTTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQAASAV*HFNLFA
Trigger: GGCAAACAAATTGAAGTGCCAAACAGCACTCGCTGC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGTGAGGAAAGCCCAATaGGTCTTAGCTAACAAGCTC +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQVRKAQ*VLANKL
Trigger: GAGCTTGTTAGCTAAGACCCATTGGGCTTTCCTCAC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCAAGGATGGTGGGAAACTaGGCAGCGGCCCATCCATTT +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPRMVGN*AAAHPF
Trigger: AAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCT...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTATTTGGCTCCTAGTCTaGACTATGCAAATGCACGAT +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTIWLLV*TMQMHD
Trigger: ATCGTGCATTTGCATAGTTCAGACTAGGAGCCAAAT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGGGAGACGTCATAAGTaGGCAGTCACAAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFGRRHK*AVTSWG
Trigger: ACCCCAACTTGTGACTGCTCACTTATGACGTCTCCC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACCAGCCCCTGATAATTaGATAGATAGTTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGPAPDN*IDSFWR
Trigger: TCTCCAAAAACTATCTATTCAATTATCAGGGGCTGG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCTCACAGACACTGAGTaGACCACACTCAAAACTACC +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYLTDTE*TTLKTT
Trigger: GGTAGTTTTGAGTGTGGTTCACTCAGTGTCTGTGAG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGACCGTGGGGCTCACATaGCAGATCTGTGTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMETVGLT*QICVGV
Trigger: TACCCCCACACAGATCTGGCATGTGAGCCCCACGGT...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTTGTGTGCGTGCTTCTTaGACAGGGGTCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFCVRAS*TGVCPS
Trigger: AGAAGGACAGACCCCTGTGCAAGAAGCACGCACACA...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATCTGAACTATGCAAATaGACGATCTGTGTACAGAAG +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGSELCK*TICVQK
Trigger: CTTCTGTACACAGATCGTGCATTTGCATAGTTCAGA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAATACCCTGCAGCGAGTaGTGTTTGGCACTTCAATTT +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQIPCSE*CLALQF
Trigger: AAATTGAAGTGCCAAACAGCACTCGCTGCAGGGTAT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCGGCCAAAACAGCAAATaGATATATATCAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFGQNSK*IYISAS
Trigger: AGATGCACTGATATATATGCATTTGCTGTTTTGGCC...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAATCCACGCAAGTGCCTaGTTCAATGCCATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQIHASA*FNAMFS
Trigger: TGAAAACATGGCATTGAAGCAGGCACTTGCGTGGAT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATTTTACTCTGCCTGCTaGTTTGTATTCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGFYSAC*FVFTFS
Trigger: TGAGAAGGTGAATACAAAGCAGCAGGCAGAGTAAAA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCAGAGGGGTCTGGACTaGAGGTGCTGTCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMEQRGLD*RCCRGD
Trigger: ATCTCCACGACAGCACCTCCAGTCCAGACCCCTCTG...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCAGTGTTGTACTGCGCATaGATGATGGTGGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPVLYCA*MMVALP
Trigger: CGGCAAGGCCACCATCATCCATGCGCAGTACAACAC...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGTCAGCCTCATCTTCTaGCTTGTTCTGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEVSLIF*LVLALN
Trigger: ATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGAC...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp AATTTGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACCTTTCCCTTGACCTTGTCAGCCTCATCTTCTaGCTTGTTCTGGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: NLAKRGLLRSVSNLSLDLVSLIF*LVLALN
Trigger: ATTAAGAGCCAGAACAAGCCAGAAGATGAGGCTGAC...AAGGTCAAGGGAAAGGTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCAGAAATGCTGCGGTTaGCCATCAGAGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMEQKCCG*PSEVPP
Trigger: TGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTG...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp TGTGATGTATCGAGGCATCATGGTGTTTGCCAGCTTTTAAAAATGATCAGGATGTCCCCGTCTTCCATGTaGAAGAGGCTGTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: CDVSRHHGVCQLLKMIRMSPSSM*KRLFPK
Trigger: TTTTGGGAACAGCCTCTTCCACATGGAAGACGGGGA...CATCCTGATCATTTTTAAAAGCTGGCAAACACCATGATGCCTCGATACATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCTGGCAATTGCCCAGTaGCTCCCAGAAGACATCTCT +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFLAIAQ*LPEDIS
Trigger: AGAGATGTCTTCTGGGAGCCACTGGGCAATTGCCAG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCAAGCCTATTTGAGATaGAGGGTACTGGGGGAGACG +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFQAYLR*RVLGET
Trigger: CGTCTCCCCCAGTACCCTCCATCTCAAATAGGCTTG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TGGTGTTTGCCAGCTTTTAAAAATGATCAGGATGTCAGAAAGCTAGCGTGGCAAAAGGTATGTAGAGGTTaGTCATCTGGCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: WCLPAFKNDQDVRKLAWQKVCRG*SSGSHF
Trigger: GAAGTGGGAGCCAGATGACCAACCTCTACATACCTT...TTGCCACGCTAGCTTTCTGACATCCTGATCATTTTTAAAAGCTGGCAAACACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR TCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTTTGATTTCTGCAGGGTaGGGCTCAAGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFLISAG*GSSCSW
Trigger: CCAGCTACAACTTGAGCCTCACCCTGCAGAAATCAA...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAAATCCAAAACAGGAGTaGGGACAGAATAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQNPKQE*GQNRVS
Trigger: ACTCACTCTATTCTGTCCTCACTCCTGTTTTGGATT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAAATAAAGGACGGTGGTaGAACCGTCCTTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQNKGRW*NRPLRY
Trigger: ATATCTCAAAGGACGGTTTCACCACCGTCCTTTATT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp GAAACTTTGTTCGACTGTGATGTATCGAGGCATCATGGTGTTTGCCAGCTTTTAAACTTTGTTCGACTGTaGTGTATCGAGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: ETLFDCDVSRHHGVCQLLNFVRL*CIEASW
Trigger: CCATGATGCCTCGATACATCACAGTCGAACAAAGTT...TAAAAGCTGGCAAACACCATGATGCCTCGATACATCACAGTCGAACAAAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR GCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTCAGATTCTCCACAGCTaGTCTAAGCTCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFQILHS*SKLCPP
Trigger: AGGAGGACAGAGCTTAGAGCAGCTGTGGAGAATCTG...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCATGTGAGCCTATTCTaGCATCCTGTTTCAGACACT +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYHVSLF*HPVSDT
Trigger: AGTGTCTGAAACAGGATGGCAGAATAGGCTCACATG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATATCCACGCAAGTGCCTaGTTCAATGCCATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYIHASA*FNAMFS
Trigger: TGAAAACATGGCATTGAAGCAGGCACTTGCGTGGAT...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAACTGCAGATATAAGCTaGAGATATAAGTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGTADIS*RYKSLH
Trigger: ATGGAGTGACTTATATCTGCAGCTTATATCTGCAGT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTTCCCCGTCTTCCATGTaGAAGAGGCTGTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFSPSSM*KRLFPK
Trigger: TTTTGGGAACAGCCTCTTCCACATGGAAGACGGGGA...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGGTAGTCGGCGTTGGCTaGAGAGTTGACTACCACCCT +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMEVVGVG*RVDYHP
Trigger: AGGGTGGTAGTCAACTCTCCAGCCAACGCCGACTAC...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR TCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCATGTAGCTGGCAGACTTaGTCTTGTTCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPCSWQT*SCSGLP
Trigger: TGGAAGCCCAGAACAAGATCAAGTCTGCCAGCTACA...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR TCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTAGTTTGTTCAAGGTCTaGAGTCTGATGCGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFSLFKV*SLMRRG
Trigger: ACCTCTGCGCATCAGACTTCAGACCTTGAACAAACT...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTGGTGAAACCGTCCTTTaGGATATTTTACTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SKCKLELDTALLLTLHQTGETVL*DILLFF
Trigger: GAAGAAAAGTAAAATATCTCAAAGGACGGTTTCACC...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR TCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATAATAAAGGACGGTGGTaGAACCGTCCTTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYNKGRW*NRPLRY
Trigger: ATATCTCAAAGGACGGTTTCACCACCGTCCTTTATT...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCAGGACGCTTTGATTTCTaGAGGGTGAGGCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPGRFDF*RVRLKL
Trigger: CAACTTGAGCCTCACCCTGCAGAAATCAAAGCGTCC...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGGTTGGCCATCAGAGGTaGCCCCAGCAGAGTTATACA +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMEVGHQR*PQQSYT
Trigger: TGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGGTCTGTCTCAAGGCATaGATTACTTCCCCCATAATT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKVCLKA*ITSPII
Trigger: AATTATGGGGGAAGTAATGCATGCCTTGAGACAGAC...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGTCTGTCTCAAGGCATaGATTACTTCCCCCATAATT +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYVCLKA*ITSPII
Trigger: AATTATGGGGGAAGTAATGCATGCCTTGAGACAGAC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAACCAAAAATAACAGAATaGTCCAAGGTACTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQPKITE*SKVLVC
Trigger: GCAGACAAGTACCTTGGAGCATTCTGTTATTTTTGG...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp ATTAGGAATGAAACTTTGTTCGACTGTGATGTATCGAGGCATCATGGTGTTTGCAAGCTAGAGACATACTaGGCAAATGAAGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: IRNETLFDCDVSRHHGVCKLETY*ANEAGV
Trigger: GACACCTGCTTCATTTGCGCAGTATGTCTCTAGCTT...GCAAACACCATGATGCCTCGATACATCACAGTCGAACAAAGTTTCATTCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGTGTCAAGCATCACCGTaGGGCTCACATGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMECQASP*GSHARS
Trigger: AGATCTGGCATGTGAGCCCCACGGTGATGCTTGACA...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATCACTTTTGAGTTCTTaGAATTCTGCTCTAAATGTC +
Preference number: 4 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGSLLSS*NSALNV
Trigger: GACATTTAGAGCAGAATTCCAAGAACTCAAAAGTGA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCATCTTCATCAGGGTCTTaGATGAATTCTGTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: LYFRTSMLICTEERTMEPSSSGS*MNSVPV
Trigger: GACGGGGACAGAATTCATGCAAGACCCTGATGAAGA...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGGGGAAAGCTGCTTGTTaGTTTTCACTTTTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKGKAAC*FSLLSS
Trigger: AGAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCC...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATAAGTGCCTGCTTCAATaGCATGTTTTCAATGAGCAT +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYKCLLQ*HVFNEH
Trigger: ATGCTCATTGAAAACATGGCATTGAAGCAGGCACTT...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATTTTTACTCTGCCTGCTaGTTTGTATTCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYFYSAC*FVFTFS
Trigger: TGAGAAGGTGAATACAAAGCAGCAGGCAGAGTAAAA...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGTCCATGATGGCATCCTaGGAATACATGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMESMMAS*EYMLMG
Trigger: GCCCATCAGCATGTATTCCCAGGATGCCATCATGGA...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGGCCAGTTGCGCAATTTaGCAAAACGTGGGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMEASCAI*QNVGCY
Trigger: GTAACAGCCCACGTTTTGCCAAATTGCGCAACTGGC...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGCAAGTGTATCGCTTTaGGAAAGCTGCTTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFASVSL*ESCLLL
Trigger: AAGCAACAAGCAGCTTTCCCAAAGCGATACACTTGC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGCTAGTTTTGTCTTTTTaGCAAATAGGAGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKLVLSF*QIGVPQ
Trigger: CTGAGGGACTCCTATTTGCCAAAAAGACAAAACTAG...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR GCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGTCTTCATCAGGGTCTTaGATGAATTCTGTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMESSSGS*MNSVPV
Trigger: GACGGGGACAGAATTCATGCAAGACCCTGATGAAGA...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR GCA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATGGCCAAAACAGCAAATaGATATATATCAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYGQNSK*IYISAS
Trigger: AGATGCACTGATATATATGCATTTGCTGTTTTGGCC...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp TGTATCGAGGCATCATGGTGTTTGCCAGCTTTTAAAAATGATCAGGATGTCAGATGTATCGAGGCATCATaGTGTTTGCCAGCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: CIEASWCLPAFKNDQDVRCIEAS*CLPAFK
Trigger: TTTAAAAGCTGGCAAACACCATGATGCCTCGATACA...TCTGACATCCTGATCATTTTTAAAAGCTGGCAAACACCATGATGCCTCGATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477489.1
3UTR CAA 72 bp CTTGGATTAATAACTAGCTTGGTTTTGAGTCTTCATTaGGCTCCTAGTCTGAACTATGCAAATGCACGATCT +
Preference number: 4 (lower is better)
Translates to: LGLITSLVLSLH*APSLNYANARS
Trigger: AGATCGTGCATTTGCATAGTTCAGACTAGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTATTAATCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
3UTR CAA 72 bp CTGAAGTACAATTCCAGTCTTGGATTAATAACTAGCTaGGTTTTGAGTCTTCATTTGGCTCCTAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LKYNSSLGLITS*VLSLHLAPSLN
Trigger: GTTCAGACTAGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTATTAATCCAAGACTGGAATTGTACTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGTTAACATTAAGGATTTaGGCTGAAAGGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: LLYFRTSMLICTEERTMELTLRI*AERPWC
Trigger: GCACCATGGCCTTTCAGCCCAAATCCTTAATGTTAA...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
3UTR CAA 72 bp TACAATTCCAGTCTTGGATTAATAACTAGCTTGGTTTaGAGTCTTCATTTGGCTCCTAGTCTGAACTATGCA +
Preference number: 4 (lower is better)
Translates to: YNSSLGLITSLV*SLHLAPSLNYA
Trigger: TGCATAGTTCAGACTAGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTATTAATCCAAGACTGGAATTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CCA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTTCACTTTTGAGTTCTTaGAATTCTGCTCTAAATGTC +
Preference number: 4 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFSLLSS*NSALNV
Trigger: GACATTTAGAGCAGAATTCCAAGAACTCAAAAGTGA...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS CCA 90 bp CCGGCAGGGCTTTTGGGCCGAGTAGGTCCCGGGCCCCCTCTGGGCTaGTCTTGGCCCTCAGGCTGGCCCGCGGAGGGCCAGGGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: PAGLLGRVGPGPPLG*SWPSGWPAEGQGQR
Trigger: CCTCTGACCCTGGCCCTCCGCGGGCCAGCCTGAGGGCCAAGACCAGCCCAGAGGGGGCCCGGGACCTACTCGGCCCAAAAGCCCTGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS GCA 90 bp CTGGGCTGGCCCTCGCCTCAGGGCTGGGGCTGGGTGCCACCAGGCTaGCGTTCGTGTCCAGAGCGGGGTCCTTCTGGTGAGGGATCACCG +
Preference number: 5 (lower is better)
Translates to: LGWPSPQGWGWVPPG*RSCPERGPSGEGSP
Trigger: CGGTGATCCCTCACCAGAAGGACCCCGCTCTGGACACGAACGGCAGCCTGGTGGCACCCAGCCCCAGCCCTGAGGCGAGGGCCAGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CCA 90 bp CCTGGGGCCTTGGGCTGTCGGCAGGACTTGAAGCAGGGGCTGTGGTaGAGGCGGAGGCGATGGCAGTGTGGGCAGCAGCTGTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PGALGCRQDLKQGLW*RRRRWQCGQQLWPG
Trigger: CCCTGGCCACAGCTGCTGCCCACACTGCCATCGCCTCCGCCTCCACCACAGCCCCTGCTTCAAGTCCTGCCGACAGCCCAAGGCCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS CCA 90 bp TCCGGCTGCTGGCTGGGAATCGCTCAGCCCTCTGGACGGTCCCCCTaGCAAGTGGTGGCACCTGAGGACCCGCTGGGGTGTAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SGCWLGIAQPSGRSP*QVVAPEDPLGCRLG
Trigger: GCCCAGCCTACACCCCAGCGGGTCCTCAGGTGCCACCACTTGCCAGGGGGACCGTCCAGAGGGCTGAGCGATTCCCAGCCAGCAGCCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CCA 90 bp AGGCCTGGGGCCTTGGGCTGTCGGCAGGACTTGAAGCAGGGGCTGTaGTGGAGGCGGAGGCGATGGCAGTGTGGGCAGCAGCTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: RPGALGCRQDLKQGL*WRRRRWQCGQQLWP
Trigger: TGGCCACAGCTGCTGCCCACACTGCCATCGCCTCCGCCTCCACCACAGCCCCTGCTTCAAGTCCTGCCGACAGCCCAAGGCCCCAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS CCA 90 bp GCAGCAGGTGGCTGGGCAGAAGCGGGCAGCAGCGGGGTGGTGGCCTaGCTGGTGCACACCGGCGCATGCTCAATAGGGGTGCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: AAGGWAEAGSSGVVA*LVHTGACSIGVLDL
Trigger: AAGGTCAAGCACCCCTATTGAGCATGCGCCGGTGTGCACCAGCCAGGCCACCACCCCGCTGCTGCCCGCTTCTGCCCAGCCACCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS CCA 90 bp GCCCGGGGCAAACTTCTGGGAGAAGCTATCATCTGTCACCCAGGGTaGACGGCTGGCAGGCTCCGCAGGGCCCCCGCTGTAGGCCACCGA +
Preference number: 5 (lower is better)
Translates to: ARGKLLGEAIICHPG*TAGRLRRAPAVGHR
Trigger: TCGGTGGCCTACAGCGGGGGCCCTGCGGAGCCTGCCAGCCGTCCACCCTGGGTGACAGATGATAGCTTCTCCCAGAAGTTTGCCCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS TCA 90 bp TGGGCTTGTGGGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTaGAGCGTTCCTGGTAGTCGGCGCCTCCTGGGAGTCCGACACCCG +
Preference number: 5 (lower is better)
Translates to: WACGWTGPSPSGHWG*SVPGSRRLLGVRHP
Trigger: CGGGTGTCGGACTCCCAGGAGGCGCCGACTACCAGGAACGCTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACCCACAAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372056.8
ENST00000623056.4
CDS GCA 90 bp GGAAGCCCCAGGGCCCGGGCCCAGTCAGGGTCACACTGTAAGACATaGTGGTGCTGTCAGCGGCCGCCTCTGTTCTGTCCCTTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GSPRARAQSGSHCKT*WCCQRPPLFCPLLP
Trigger: GGGCAGCAAGGGACAGAACAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGCCCTGGGGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263066.11
ENST00000361373.9
ENST00000429277.7
CDS CCA 90 bp AGCCCCAGGGCCCGGGCCCAGTCAGGGTCACACTGTAAGACATGCTaGTGCTGTCAGCGGCCGCCTCTGTTCTGTCCCTTGCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SPRARAQSGSHCKTC*CCQRPPLFCPLLPS
Trigger: GCTGGGCAGCAAGGGACAGAACAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGCCCTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263066.11
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GCGAGGGAGCCGGGCAGCGCCAGGGATCAGCCTCTTCCCCAGACCCTGATCTACACTGAAGTCACTGCCTaGGGCTTGGGCCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AREPGSARDQPLPQTLIYTEVTA*GLGLPS
Trigger: GCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAGT...GTAGATCAGGGTCTGGGGAAGAGGCTGATCCCTGGCGCTGCCCGGCTCCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS CCA 90 bp CAAACTTCTGGGAGAAGCTATCATCTGTCACCCAGGGTGGACGGCTaGCAGGCTCCGCAGGGCCCCCGCTGTAGGCCACCGAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: QTSGRSYHLSPRVDG*QAPQGPRCRPPRVQ
Trigger: CTGCACCCTCGGTGGCCTACAGCGGGGGCCCTGCGGAGCCTGCCAGCCGTCCACCCTGGGTGACAGATGATAGCTTCTCCCAGAAGTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS GCA 90 bp GGAAGCCCCAGGGCCCGGGCCCAGTCAGGGTCACACTGTAAGACATaGTGGTGCTGTCAGCGGCCGCCTCTGCAGACAAAGGGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: GSPRARAQSGSHCKT*WCCQRPPLQTKGRE
Trigger: CTCTCTACCCTTTGTCTGCAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGCCCTGGGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372066.8
CDS CCA 90 bp GTCTCTGCCGAGTACAGGCCAATGGGGTTGTTATATTGCCTCGGCTaGCTCGAGCCCGGCAGGGCTTTTGGGCCGAGTAGGTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: VSAEYRPMGLLYCLG*LEPGRAFGPSRSRA
Trigger: GGCCCGGGACCTACTCGGCCCAAAAGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAACAACCCCATTGGCCTGTACTCGGCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CCA 90 bp AGCCCCAGGGCCCGGGCCCAGTCAGGGTCACACTGTAAGACATGCTaGTGCTGTCAGCGGCCGCCTCTGCAGACAAAGGGTAGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: SPRARAQSGSHCKTC*CCQRPPLQTKGREG
Trigger: ACCCTCTCTACCCTTTGTCTGCAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGCCCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372066.8
CDS-3UTR CAA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCATGGATGATGGTGGCCTaGCCGCCCAGCCCCTTCACC +
Preference number: 5 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPWMMVA*PPSPFT
Trigger: GGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCA...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGACTGAAGTCACTGCCTaGGGCTTGGGCCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLTEVTA*GLGLPS
Trigger: GCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAGT...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCAGAGCGAGACTGCAGGTaGGAGGAACGGCGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPERDCR*EERRAH
Trigger: GTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCTC...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS CCA 90 bp GATGACATTGTTGCAGTGACCGCAGAGTGGAGTCCGGCTGCTGGCTaGGAATCGCTCAGCCCTCTGGACGGTCCCCCTGGCAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: DDIVAVTAEWSPAAG*ESLSPLDGPPGKWW
Trigger: CCACCACTTGCCAGGGGGACCGTCCAGAGGGCTGAGCGATTCCCAGCCAGCAGCCGGACTCCACTCTGCGGTCACTGCAACAATGTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS-3UTR CAA 90 bp TATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCAGTCACTGCCTTGGGCTaGGGCCTGCCCAGCGATGGC +
Preference number: 5 (lower is better)
Translates to: YGASTHGTERRVHAPTSPVTALG*GLPSDG
Trigger: GCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGAC...TGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGACTGAAGTCACTGCCTaGGGCTTGGGCCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GASTHGTERRVHAPTSPLTEVTA*GLGLPS
Trigger: GCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAGT...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGAGCCCGGCAGGGCTTTaGGGCCGAGTAGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQSPAGL*GRVGPG
Trigger: CCCGGGACCTACTCGGCCCAAAAGCCCTGCCGGGCT...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS TCA 90 bp AGTCCGACACCCGAGGCCTTCCCTCGGAGGCTCATCTGGTACATCTaGGCCATCTCCCTCAGGGTCTCTGCCGAGTACAGGCCAATGGGG +
Preference number: 5 (lower is better)
Translates to: SPTPEAFPRRLIWYI*AISLRVSAEYRPMG
Trigger: CCCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAGATGGCTCAGATGTACCAGATGAGCCTCCGAGGGAAGGCCTCGGGTGTCGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS GCA 90 bp TCCCTCAGGGTCTCTGCCGAGTACAGGCCAATGGGGTTGTTATATTaGCTCGGCTGGCTCGAGCCCGGCAGGGCTTTTGGGCCGAGTAGG +
Preference number: 5 (lower is better)
Translates to: SLRVSAEYRPMGLLY*LGWLEPGRAFGPSR
Trigger: CCTACTCGGCCCAAAAGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAACAACCCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS-3UTR CAA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCCCTCTGTTCTGTCCCTaGCTGCCCAGCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGPLFCP*LPSRAA
Trigger: CGCAGCCCGGCTGGGCAGCAAGGGACAGAACAGAGG...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263066.11
CDS-3UTR CAA 90 bp GCTGGGCCCCAGCATCAGCTCTGGGGTGGGCAGAGGACAGAAATGCTGCGGTTGGTCATGGTGTCTGTGTaGACGCCGTCAATGGCCACC +
Preference number: 5 (lower is better)
Translates to: AGPQHQLWGGQRTEMLRLVMVSV*TPSMAT
Trigger: GGTGGCCATTGACGGCGTCAACACAGACACCATGAC...CAACCGCAGCATTTCTGTCCTCTGCCCACCCCAGAGCTGATGCTGGGGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCGTCACTGCCTTGGGCTaGGGCCTGCCCAGCGATGGC +
Preference number: 5 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCVTALG*GLPSDG
Trigger: GCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGAC...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: GASTHGTERRVHAPTSPLTEMLR*AIRGAP
Trigger: GGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGT...CAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTGTGACAACCCGGGGCTaGGGTGCAGGGGCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PPRVWACEPILPSCFRHCVTTRG*GAGAAG
Trigger: CCCCGCCGCCCCTGCACCCAAGCCCCGGGTTGTCAC...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS CCA 90 bp TACCAGAAATGGGCCCCGGATGACATTGTTGCAGTGACCGCAGAGTaGAGTCCGGCTGCTGGCTGGGAATCGCTCAGCCCTCTGGACGGT +
Preference number: 5 (lower is better)
Translates to: YQKWAPDDIVAVTAE*SPAAGWESLSPLDG
Trigger: ACCGTCCAGAGGGCTGAGCGATTCCCAGCCAGCAGCCGGACTCCACTCTGCGGTCACTGCAACAATGTCATCCGGGGCCCATTTCTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS-3UTR CAA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCTTCACCTCGATGGGCTaGTGGGTGGACAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LGLLLPLQRALFRAALSSFTSMG*WVDRAE
Trigger: CTCGGCCCTGTCCACCCACAAGCCCATCGAGGTGAA...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCTTCACCTCGATGGGCTaGTGGGTGGACAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISFTSMG*WVDRAE
Trigger: CTCGGCCCTGTCCACCCACAAGCCCATCGAGGTGAA...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCTGGATGATGGTGGCCTaGCCGCCCAGCCCCTTCACC +
Preference number: 5 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCWMMVA*PPSPFT
Trigger: GGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCA...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTGGATGATGGTGGCCTaGCCGCCCAGCCCCTTCACC +
Preference number: 5 (lower is better)
Translates to: AIRGAPSRVIHCQASPWGWMMVA*PPSPFT
Trigger: GGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCA...GCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp CAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACAGTCACTGCCTTGGGCTaGGGCCTGCCCAGCGATGGC +
Preference number: 5 (lower is better)
Translates to: QRCPQQSYTLSSITVGLTVTALG*GLPSDG
Trigger: GCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGAC...TGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCCCAGAAGACATCTCTTaGGACGTCCGGGCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVPEDIS*DVRAPK
Trigger: CTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCTGG...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS CCA 90 bp ACATCTGAGCCATCTCCCTCAGGGTCTCTGCCGAGTACAGGCCAATaGGGTTGTTATATTGCCTCGGCTGGCTCGAGCCCGGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: TSEPSPSGSLPSTGQ*GCYIASAGSSPAGL
Trigger: AAGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAACAACCCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAGATGGCTCAGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS-3UTR CAA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCCTGGCAGACTTGATCTaGTTCTGGGCTTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVLADLI*FWASRW
Trigger: CCACCTGGAAGCCCAGAACAAGATCAAGTCTGCCAG...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCGAGCGAGACTGCAGGTaGGAGGAACGGCGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCERDCR*EERRAH
Trigger: GTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCTC...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GCTGTCTACGGCAAGGTCCTTAATAGGGAGGCTCCCACTGAAGTCACTGCCTTGGAGCGAGACTGCAGGTaGGAGGAACGGCGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: AVYGKVLNREAPTEVTALERDCR*EERRAH
Trigger: GTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCTC...CAAGGCAGTGACTTCAGTGGGAGCCTCCCTATTAAGGACCTTGCCGTAGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CAA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAAGCCCGGCAGGGCTTTaGGGCCGAGTAGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQSPAGL*GRVGPG
Trigger: CCCGGGACCTACTCGGCCCAAAAGCCCTGCCGGGCT...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCTTCACCTCGATGGGCTaGTGGGTGGACAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCFTSMG*WVDRAE
Trigger: CTCGGCCCTGTCCACCCACAAGCCCATCGAGGTGAA...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACCACTGCCAATGCTGATGGGCGTGTaGTACTGCGCATGGATGATG +
Preference number: 5 (lower is better)
Translates to: ASTHGTERRVHAPTSPLPMLMGV*YCAWMM
Trigger: CATCATCCATGCGCAGTACAACACGCCCATCAGCAT...TGGCAGTGGTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCATGCTGATGGGCGTGTaGTACTGCGCATGGATGATG +
Preference number: 5 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVMLMGV*YCAWMM
Trigger: CATCATCCATGCGCAGTACAACACGCCCATCAGCAT...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CAA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCGCGTTGGCTGGAGAGTaGACTACCACCCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCALAGE*TTTLLG
Trigger: TCCCAGGAGGGTGGTAGTCAACTCTCCAGCCAACGC...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS GCA 90 bp GCTCCCCGTCTTCCATGTGGAAGAGGCTGTTCCCAAAAGGCTTCTTaGAGGCCGCACAGACGAAGCAGGTGGTGTGCCATGTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: APRLPCGRGCSQKAS*RPHRRSRWCAMSVS
Trigger: TGAGACAGACATGGCACACCACCTGCTTCGTCTGTGCGGCCTGCAAGAAGCCTTTTGGGAACAGCCTCTTCCACATGGAAGACGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000477489.1
ENST00000623056.4
CDS GCA 90 bp CCCTCCAGATTCACATGGCAGACTGCGCAAATGAAGCAGGTGTCGTaGCAAGTGTGGCCCAGGGCTTCGATAAACTTGTCGCCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PSRFTWQTAQMKQVS*QVWPRASINLSPAS
Trigger: GGAGGCTGGCGACAAGTTTATCGAAGCCCTGGGCCACACTTGGCACGACACCTGCTTCATTTGCGCAGTCTGCCATGTGAATCTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS-3UTR CAA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCCTGGCAGACTTGATCTaGTTCTGGGCTTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLLADLI*FWASRW
Trigger: CCACCTGGAAGCCCAGAACAAGATCAAGTCTGCCAG...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GCGATGGCATCCATGATGGCATCCTGGGAATACATGCTGATGGGCGTGTTGTACTTCACCTCGATGGGCTaGTGGGTGGACAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: AMASMMASWEYMLMGVLYFTSMG*WVDRAE
Trigger: CTCGGCCCTGTCCACCCACAAGCCCATCGAGGTGAA...GTACAACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CAA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGGTCACTGCCTTGGGCTaGGGCCTGCCCAGCGATGGC +
Preference number: 5 (lower is better)
Translates to: SRVIHCQASPWGSHARSVVTALG*GLPSDG
Trigger: GCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGAC...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGACTGAAGTCACTGCCTaGGGCTTGGGCCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: VIHCQASPWGSHARSVWGTEVTA*GLGLPS
Trigger: GCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAGT...CCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAAACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKTEMLR*AIRGAP
Trigger: GGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGT...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCGCCCATCCATTTCCCTaGGTTCTGGGGTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: ELWSQHTRYRKEGACPHLAHPFP*VLGCYA
Trigger: GGCATAACACCCCAGAACCAAGGGAAATGGATGGGC...GAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp CTGGGGCTTCTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCGCCCATCCATTTCCCTaGGTTCTGGGGTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: LGLLLPLQRALFRAALSSAHPFP*VLGCYA
Trigger: GGCATAACACCCCAGAACCAAGGGAAATGGATGGGC...GGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAGAAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp ACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACAATGGGGTTGTTATATaGCCTCGGCTGGCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: TMEPAHTVQKGGCMPPPHNGVVI*PRLARA
Trigger: GGCTCGAGCCAGCCGAGGCAATATAACAACCCCATT...GTGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCAGGGCTTCGATAAACTaGTCGCCAGCCTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: PQKKHQPPESFVASSRSSRASIN*SPASTG
Trigger: CCCCGTGGAGGCTGGCGACAAGTTTATCGAAGCCCT...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCAGCACAGGCGGCCTaGGCCGCCTACAAGTTGATG +
Preference number: 5 (lower is better)
Translates to: PQKKHQPPESFVASSRSSSAQAA*AAYKLM
Trigger: CATCAACTTGTAGGCGGCCAAGGCCGCCTGTGCTGA...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCTGGGGTTTCACCATATaGGCCAGGCTGGTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVWGFTI*ARLVSN
Trigger: GTTTGAAACCAGCCTGGCCAATATGGTGAAACCCCA...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS GCA 90 bp TCGGAGGCTCATCTGGTACATCTGAGCCATCTCCCTCAGGGTCTCTaGCGAGTACAGGCCAATGGGGTTGTTATATTGCCTCGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SEAHLVHLSHLPQGL*RVQANGVVILPRLA
Trigger: AGCCAGCCGAGGCAATATAACAACCCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAGATGGCTCAGATGTACCAGATGAGCCTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS-3UTR CAA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGACCTCTGTTCTGTCCCTaGCTGCCCAGCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGPLFCP*LPSRAA
Trigger: CGCAGCCCGGCTGGGCAGCAAGGGACAGAACAGAGG...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACTGGCAGACTTGATCTaGTTCTGGGCTTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPLADLI*FWASRW
Trigger: CCACCTGGAAGCCCAGAACAAGATCAAGTCTGCCAG...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACTGGCAGACTTGATCTaGTTCTGGGCTTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: NYGASTHGTERRVHAPTSLADLI*FWASRW
Trigger: CCACCTGGAAGCCCAGAACAAGATCAAGTCTGCCAG...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTATTCACCTCGATGGGCTaGTGGGTGGACAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLFTSMG*WVDRAE
Trigger: CTCGGCCCTGTCCACCCACAAGCCCATCGAGGTGAA...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CAA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAATGCTGATGGGCGTGTaGTACTGCGCATGGATGATG +
Preference number: 5 (lower is better)
Translates to: SITVGLTCQICVGVRMEGMLMGV*YCAWMM
Trigger: CATCATCCATGCGCAGTACAACACGCCCATCAGCAT...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp ATGGGCGTGTTGTACTGCGCATGGATGATGGTGGCCTTGCCGCCCAGCCCCTTCGCCTCATCTTCTGGCTaGTTCTGGCTCTTAATCACA +
Preference number: 5 (lower is better)
Translates to: MGVLYCAWMMVALPPSPFASSSG*FWLLIT
Trigger: TGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGC...GAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CAA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGAGGCCATGGTGCCAGTaGCGCAATTTGGCAAAACGT +
Preference number: 5 (lower is better)
Translates to: LLPLQRALFRAALSSRGQRPWCQ*RNLAKR
Trigger: ACGTTTTGCCAAATTGCGCAACTGGCACCATGGCCT...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAAGGCCATGGTGCCAGTaGCGCAATTTGGCAAAACGT +
Preference number: 5 (lower is better)
Translates to: SITVGLTCQICVGVRMEGRPWCQ*RNLAKR
Trigger: ACGTTTTGCCAAATTGCGCAACTGGCACCATGGCCT...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp TGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: CCGWPSEVPPAELYIVKHTEMLR*AIRGAP
Trigger: GGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGT...ATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GGTGGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCGCCCATCCATTTCCCTaGGTTCTGGGGTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: GGKLSSGPSISLGSGVLCAHPFP*VLGCYA
Trigger: GGCATAACACCCCAGAACCAAGGGAAATGGATGGGC...GCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCAGCCCATCCATTTCCCTaGGTTCTGGGGTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: ERTMEPAHTVQKGGCMPPAHPFP*VLGCYA
Trigger: GGCATAACACCCCAGAACCAAGGGAAATGGATGGGC...TGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTAGCCCGGCAGGGCTTTaGGGCCGAGTAGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: SKCKLELDTALLLTLHQTSPAGL*GRVGPG
Trigger: CCCGGGACCTACTCGGCCCAAAAGCCCTGCCGGGCT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CAA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTAATGGGGTTGTTATATaGCCTCGGCTGGCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: TTARRGLCLITLGLLLPLNGVVI*PRLARA
Trigger: GGCTCGAGCCAGCCGAGGCAATATAACAACCCCATT...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGAATGGGGTTGTTATATaGCCTCGGCTGGCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: SSITVGLTCQICVGVRMENGVVI*PRLARA
Trigger: GGCTCGAGCCAGCCGAGGCAATATAACAACCCCATT...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp CTACTTCCTCTTCAAAGAGCCCTATTCCGGGCTGCCCTGAGCTCCAGAGGGCAGTACAGGCCAATGGGGTaGTTATATTGCCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLPLQRALFRAALSSRGQYRPMG*LYCLGW
Trigger: CCAGCCGAGGCAATATAACAACCCCATTGGCCTGTA...CTGCCCTCTGGAGCTCAGGGCAGCCCGGAATAGGGCTCTTTGAAGAGGAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGGTGACAACCCGGGGCTaGGGTGCAGGGGCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKVTTRG*GAGAAG
Trigger: CCCCGCCGCCCCTGCACCCAAGCCCCGGGTTGTCAC...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AAAGCTAGCGTGGCAAGGTATGTAGAGGTTGGTCATCTGGCTCCCACTTCCTCCAGGGCTTCGATAAACTaGTCGCCAGCCTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: KASVARYVEVGHLAPTSSRASIN*SPASTG
Trigger: CCCCGTGGAGGCTGGCGACAAGTTTATCGAAGCCCT...GGAGGAAGTGGGAGCCAGATGACCAACCTCTACATACCTTGCCACGCTAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR CAA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCCTCCCGAATCCTTTGTaGCCAGCAGCAGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PQKKHQPPESFVASSRSSLPNPL*PAAGAA
Trigger: AGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAG...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCAGCAAGTGTATCGCTTaGGGAAAGCTGCTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVSKCIA*GKLLVA
Trigger: AGCAACAAGCAGCTTTCCCAAAGCGATACACTTGCT...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCGGCCACCAAGCCTATTaGAGATGGAGGGTACTGGGG +
Preference number: 5 (lower is better)
Translates to: PQKKHQPPESFVASSRSSGHQAY*RWRVLG
Trigger: CCCCAGTACCCTCCATCTCAAATAGGCTTGGTGGCC...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTCCTCTGTTCTGTCCCTaGCTGCCCAGCCGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: SKCKLELDTALLLTLHQTPLFCP*LPSRAA
Trigger: CGCAGCCCGGCTGGGCAGCAAGGGACAGAACAGAGG...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACCTGGCAGACTTGATCTaGTTCTGGGCTTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYLADLI*FWASRW
Trigger: CCACCTGGAAGCCCAGAACAAGATCAAGTCTGCCAG...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATGGATGATGGTGGCCTaGCCGCCCAGCCCCTTCACC +
Preference number: 5 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGWMMVA*PPSPFT
Trigger: GGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CAA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCACTGAAGTCACTGCCTaGGGCTTGGGCCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFTEVTA*GLGLPS
Trigger: GCTGGGCAGGCCCAAGCCCAAGGCAGTGACTTCAGT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CAA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAGAGCGAGACTGCAGGTaGGAGGAACGGCGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGERDCR*EERRAH
Trigger: GTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCTC...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GGGAAACTGAGCAGCGGCCCATCCATTTCCCTTGGTTCTGGGGTGTTATGCCAGAGGCCATGGTGCCAGTaGCGCAATTTGGCAAAACGT +
Preference number: 5 (lower is better)
Translates to: GKLSSGPSISLGSGVLCQRPWCQ*RNLAKR
Trigger: ACGTTTTGCCAAATTGCGCAACTGGCACCATGGCCT...CTGGCATAACACCCCAGAACCAAGGGAAATGGATGGGCCGCTGCTCAGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTAGGCCATGGTGCCAGTaGCGCAATTTGGCAAAACGT +
Preference number: 5 (lower is better)
Translates to: TTARRGLCLITLGLLLPLRPWCQ*RNLAKR
Trigger: ACGTTTTGCCAAATTGCGCAACTGGCACCATGGCCT...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGG +
Preference number: 5 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLQQSYT*SSITVG
Trigger: CCCCACGGTGATGCTTGACAATGTATAACTCTGCTG...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GCAGGTTGGAGGAACGGCGTGCCCACTCGTCAGCCTCATCTTCTGGCTTGTTCTCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGG +
Preference number: 5 (lower is better)
Translates to: AGWRNGVPTRQPHLLACSQQSYT*SSITVG
Trigger: CCCCACGGTGATGCTTGACAATGTATAACTCTGCTG...AGAACAAGCCAGAAGATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CAA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGTACAGGCCAATGGGGTaGTTATATTGCCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSITVGLTCQICVGVRMEYRPMG*LYCLGW
Trigger: CCAGCCGAGGCAATATAACAACCCCATTGGCCTGTA...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTTCCCAAAAGGCTTCTaGCAGGCCGCACAGACGAAG +
Preference number: 5 (lower is better)
Translates to: PQKKHQPPESFVASSRSSFPKGF*QAAQTK
Trigger: CTTCGTCTGTGCGGCCTGCAAGAAGCCTTTTGGGAA...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS TCA 90 bp CCACAAAGCACACATCTGCCAGGGAAGTCTTGCAGTAGGCACAGGTaGACTCTTCAGGGTGCCAAGAACGGCCCATGGCTACCAGAAATG +
Preference number: 5 (lower is better)
Translates to: PQSTHLPGKSCSRHR*TLQGAKNGPWLPEM
Trigger: CATTTCTGGTAGCCATGGGCCGTTCTTGGCACCCTGAAGAGTTCACCTGTGCCTACTGCAAGACTTCCCTGGCAGATGTGTGCTTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS-3UTR CAA 90 bp CTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTCAAAATGCTGATGGGCGTGTaGTACTGCGCATGGATGATG +
Preference number: 5 (lower is better)
Translates to: LPGGVSASLPWGFYFLFKMLMGV*YCAWMM
Trigger: CATCATCCATGCGCAGTACAACACGCCCATCAGCAT...TTTGAAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGTCACTGCCTTGGGCTaGGGCCTGCCCAGCGATGGC +
Preference number: 5 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQVTALG*GLPSDG
Trigger: GCCATCGCTGGGCAGGCCCAAGCCCAAGGCAGTGAC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CAA 90 bp AGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGGAGCCTCATCTTCTGGCTaGTTCTGGCTCTTAATCACA +
Preference number: 5 (lower is better)
Translates to: SITVGLTCQICVGVRMEGASSSG*FWLLIT
Trigger: TGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGC...TCCCTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCGCCTCATCTTCTGGCTaGTTCTGGCTCTTAATCACA +
Preference number: 5 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLASSSG*FWLLIT
Trigger: TGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGC...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp ATGAGGCCAGGAGCTGAGGATGGTGGGAAACTGAGCAGCGGCCCATCCATTTCCGCCTCATCTTCTGGCTaGTTCTGGCTCTTAATCACA +
Preference number: 5 (lower is better)
Translates to: MRPGAEDGGKLSSGPSISASSSG*FWLLIT
Trigger: TGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGC...GGAAATGGATGGGCCGCTGCTCAGTTTCCCACCATCCTCAGCTCCTGGCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCATGCCAGTTGCGCAATTaGGCAAAACGTGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: NYGASTHGTERRVHAPTSCQLRN*AKRGLL
Trigger: TAACAGCCCACGTTTTGCCAAATTGCGCAACTGGCA...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACAGGCCATGGTGCCAGTaGCGCAATTTGGCAAAACGT +
Preference number: 5 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYRPWCQ*RNLAKR
Trigger: ACGTTTTGCCAAATTGCGCAACTGGCACCATGGCCT...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AACTATGGAGCCAGCACACACGGTACAGAAAGGAGGGTGCATGCCCCCACCTCACAGCAGAGTTATACATaGTCAAGCATCACCGTGGGG +
Preference number: 5 (lower is better)
Translates to: NYGASTHGTERRVHAPTSQQSYT*SSITVG
Trigger: CCCCACGGTGATGCTTGACAATGTATAACTCTGCTG...TGAGGTGGGGGCATGCACCCTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: SRVIHCQASPWGSHARSVTEMLR*AIRGAP
Trigger: GGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGT...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGGCCCATCCATTTCCCTaGGTTCTGGGGTGTTATGCC +
Preference number: 5 (lower is better)
Translates to: VIHCQASPWGSHARSVWGAHPFP*VLGCYA
Trigger: GGCATAACACCCCAGAACCAAGGGAAATGGATGGGC...CCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAACTGGCAGACTTGATCTaGTTCTGGGCTTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: EMLRLAIRGAPSRVIHCQLADLI*FWASRW
Trigger: CCACCTGGAAGCCCAGAACAAGATCAAGTCTGCCAG...TTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp TTATATGTACAGAAGAGAGAACTATGGAGCCAGCACACACGGTACAGAAAGGAGTGGATGATGGTGGCCTaGCCGCCCAGCCCCTTCACC +
Preference number: 5 (lower is better)
Translates to: LYVQKRELWSQHTRYRKEWMMVA*PPSPFT
Trigger: GGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCA...CTCCTTTCTGTACCGTGTGTGCTGGCTCCATAGTTCTCTCTTCTGTACATATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp GTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGATGCTGATGGGCGTGTaGTACTGCGCATGGATGATG +
Preference number: 5 (lower is better)
Translates to: VIHCQASPWGSHARSVWGMLMGV*YCAWMM
Trigger: CATCATCCATGCGCAGTACAACACGCCCATCAGCAT...CCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
CDS-3UTR CAA 90 bp TCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTAAGGATGGAGGCCTCATCTTCTGGCTaGTTCTGGCTCTTAATCACA +
Preference number: 5 (lower is better)
Translates to: SSITVGLTCQICVGVRMEASSSG*FWLLIT
Trigger: TGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGC...CTCCATCCTTACCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp TCACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTTCAAACCTTTCCCTaGACCTTCGCAGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SPLPGGVSASLPWGFYFLFQTFP*TFAELL
Trigger: AAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAAA...GAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GCAGGTTGGAGGAACGGCGTGCCCACTCGTCAGCCTCATCTTCTGGCTTGTTCTTTTCAAACCTTTCCCTaGACCTTCGCAGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: AGWRNGVPTRQPHLLACSFQTFP*TFAELL
Trigger: AAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAAA...AGAACAAGCCAGAAGATGAGGCTGACGAGTGGGCACGCCGTTCCTCCAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CAA 90 bp AGAGGACAGAAATGCTGCGGTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACCAGCAGAGTTATACATaGTCAAGCATCACCGTGGGG +
Preference number: 5 (lower is better)
Translates to: RGQKCCGWPSEVPPAELYQQSYT*SSITVG
Trigger: CCCCACGGTGATGCTTGACAATGTATAACTCTGCTG...GTATAACTCTGCTGGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAATGGAGGTGGTGCTCTaGCCCGGGGCAAACTTCTGG +
Preference number: 5 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGMEVVL*PGANFW
Trigger: CCAGAAGTTTGCCCCGGGCAAGAGCACCACCTCCAT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTTTGGCCGCCTACAAGTaGATGGTGTGTGCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PPRVWACEPILPSCFRHCLAAYK*MVCACF
Trigger: GAAGCACGCACACACCATCAACTTGTAGGCGGCCAA...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCGGCACTTCAATTTGTTaGCCAGGGGAGCGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: PQKKHQPPESFVASSRSSGTSIC*PGERLR
Trigger: TCTTAAGCGCTCCCCTGGCAAACAAATTGAAGTGCC...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCGTTTGGCACTTCAATTaGTTTGCCAGGGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: PQKKHQPPESFVASSRSSVWHFN*FARGAL
Trigger: AAGCGCTCCCCTGGCAAACAAATTGAAGTGCCAAAC...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGTCATGGTGTCTGTGTaGACGCCGTCAATGGCCACC +
Preference number: 5 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGVMVSV*TPSMAT
Trigger: GGTGGCCATTGACGGCGTCAACACAGACACCATGAC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp ACCACTGCCAGGAGGGGTCTCTGCCTCATTACCCTGGGGCTTCTACTTCCTCTTTTTCAAACCTTTCCCTaGACCTTCGCAGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: TTARRGLCLITLGLLLPLFQTFP*TFAELL
Trigger: AAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAAA...AAGAGGAAGTAGAAGCCCCAGGGTAATGAGGCAGAGACCCCTCCTGGCAGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GTTGGCCATCAGAGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGTGCCAGTTGCGCAATTaGGCAAAACGTGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: VGHQRCPQQSYTLSSITVCQLRN*AKRGLL
Trigger: TAACAGCCCACGTTTTGCCAAATTGCGCAACTGGCA...CACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCTCTGATGGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGGGGGTGCCAGTTGCGCAATTaGGCAAAACGTGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: VIHCQASPWGSHARSVWGCQLRN*AKRGLL
Trigger: TAACAGCCCACGTTTTGCCAAATTGCGCAACTGGCA...CCCCCACACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCAATGGGGTTGTTATATaGCCTCGGCTGGCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFNGVVI*PRLARA
Trigger: GGCTCGAGCCAGCCGAGGCAATATAACAACCCCATT...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGAAGAGGCCTGGGGCCTaGGGCTGTCGGCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKKRPGA*GCRQDL
Trigger: CAAGTCCTGCCGACAGCCCAAGGCCCCAGGCCTCTT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CAA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCCCATAATTTTGGTGTaGCACTTGGCACACAGCGGG +
Preference number: 5 (lower is better)
Translates to: PPRVWACEPILPSCFRHCPIILV*HLAHSG
Trigger: CCCGCTGTGTGCCAAGTGCAACACCAAAATTATGGG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTATCGCAGCCATGGCACTaGGTGCTGAACAGATTGATG +
Preference number: 5 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLSQPWH*VLNRLM
Trigger: CATCAATCTGTTCAGCACCAAGTGCCATGGCTGCGA...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTGCAGCGAGTGCTGTTaGGCACTTCAATTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: PQKKHQPPESFVASSRSSCSECC*ALQFVC
Trigger: GCAAACAAATTGAAGTGCCAAACAGCACTCGCTGCA...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp ATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCCATTTAAAGGAACATTaGAAAAGGATGATGCAGACC +
Preference number: 5 (lower is better)
Translates to: ISLPNPLLPAAGAAPGLVHLKEH*KRMMQT
Trigger: GGTCTGCATCATCCTTTTCAAATGTTCCTTTAAATG...GACGAGGCCCGGAGCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACTGGCAGACTTGATCTaGTTCTGGGCTTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGLADLI*FWASRW
Trigger: CCACCTGGAAGCCCAGAACAAGATCAAGTCTGCCAG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AGGTGCCCCCAGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCTTTCAAACCTTTCCCTaGACCTTCGCAGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: RCPQQSYTLSSITVGLTCFQTFP*TFAELL
Trigger: AAGAAGCTCTGCGAAGGTCAAGGGAAAGGTTTGAAA...GCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCTGGGGGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AATTTGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACCTTTCCCTTGACCTTACAGAAATGCTGCGGTaGGCCATCAGAGGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: NLAKRGLLRSVSNLSLDLTEMLR*AIRGAP
Trigger: GGGGGCACCTCTGATGGCCAACCGCAGCATTTCTGT...AAGGTCAAGGGAAAGGTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAATGGAGGTGGTGCTCTaGCCCGGGGCAAACTTCTGG +
Preference number: 5 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQMEVVL*PGANFW
Trigger: CCAGAAGTTTGCCCCGGGCAAGAGCACCACCTCCAT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTCCCAAAAGGCTTCTaGCAGGCCGCACAGACGAAG +
Preference number: 5 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGFPKGF*QAAQTK
Trigger: CTTCGTCTGTGCGGCCTGCAAGAAGCCTTTTGGGAA...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp TCTCCAGGCAGTCCCAGCAGATTTTACTCTGCCTGCTGCTTTGTATTCACCTTCTCGCAGCCATGGCACTaGGTGCTGAACAGATTGATG +
Preference number: 5 (lower is better)
Translates to: SPGSPSRFYSACCFVFTFSQPWH*VLNRLM
Trigger: CATCAATCTGTTCAGCACCAAGTGCCATGGCTGCGA...GAAGGTGAATACAAAGCAGCAGGCAGAGTAAAATCTGCTGGGACTGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCTGGAGCCCTGGCAATaGCCCAGTGGCTCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYLEPWQ*PSGSQK
Trigger: CTTCTGGGAGCCACTGGGCAATTGCCAGGGCTCCAG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AGCAGAGTTATACATTGTCAAGCATCACCGTGGGGCTCACATGCCAGATCTGTGTGCCAGTTGCGCAATTaGGCAAAACGTGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: SRVIHCQASPWGSHARSVCQLRN*AKRGLL
Trigger: TAACAGCCCACGTTTTGCCAAATTGCGCAACTGGCA...CACAGATCTGGCATGTGAGCCCCACGGTGATGCTTGACAATGTATAACTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGAGCCCGGCAGGGCTTTaGGGCCGAGTAGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: LLYFRTSMLICTEERTMESPAGL*GRVGPG
Trigger: CCCGGGACCTACTCGGCCCAAAAGCCCTGCCGGGCT...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAATTTTGGTGTTGCACTaGGCACACAGCGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGILVLH*AHSGAK
Trigger: CTTTGCCCCGCTGTGTGCCAAGTGCAACACCAAAAT...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAATTTTGGTGTTGCACTaGGCACACAGCGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGILVLH*AHSGAK
Trigger: CTTTGCCCCGCTGTGTGCCAAGTGCAACACCAAAAT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGACCCATAATTTTGGTGTaGCACTTGGCACACAGCGGG +
Preference number: 5 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGPIILV*HLAHSG
Trigger: CCCGCTGTGTGCCAAGTGCAACACCAAAATTATGGG...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAACTTCCCCCATAATTTaGGTGTTGCACTTGGCACAC +
Preference number: 5 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLTSPII*VLHLAH
Trigger: GTGTGCCAAGTGCAACACCAAAATTATGGGGGAAGT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATTCAGCACAGGCGGCCTaGGCCGCCTACAAGTTGATG +
Preference number: 5 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYSAQAA*AAYKLM
Trigger: CATCAACTTGTAGGCGGCCAAGGCCGCCTGTGCTGA...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAAGCCTCCCGAATCCTTaGTTGCCAGCAGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQSLPNP*LPAAGA
Trigger: TGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CCTCAGAAGAAACATCAGCCTCCCGAATCCTTTGTTGCCAGCAGCAGGAGCAGCTGGGAAAGCTGCTTGTaGCTTTTCACTTTTGAGTTC +
Preference number: 5 (lower is better)
Translates to: PQKKHQPPESFVASSRSSWESCL*LFTFEF
Trigger: GAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCA...GCTGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCTGATGTTTCTTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAACTCTGCCTGCTGCTTaGTATTCACCTTCTCACAGA +
Preference number: 5 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLTLPAA*YSPSHR
Trigger: TCTGTGAGAAGGTGAATACAAAGCAGCAGGCAGAGT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAAAGAGGCCTGGGGCCTaGACCTTCGCAGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQKRPGA*TFAELL
Trigger: AAGAAGCTCTGCGAAGGTCAAGGCCCCAGGCCTCTT...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429277.7
CDS-3UTR CAA 90 bp CTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGCCAGAGCGAGACTGCAGGTaGGAGGAACGGCGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: LYFRTSMLICTEERTMEPERDCR*EERRAH
Trigger: GTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCTC...TGGCTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAATTGGCCGCCTACAAGTaGATGGTGTGTGCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQLAAYK*MVCACF
Trigger: GAAGCACGCACACACCATCAACTTGTAGGCGGCCAA...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGATGGGGTTTCACCATATaGGCCAGGCTGGTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGWGFTI*ARLVSN
Trigger: GTTTGAAACCAGCCTGGCCAATATGGTGAAACCCCA...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GTCAACAATGAGGAGACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGAGCCTCATCTTCTGGCTaGTTCTGGCTCTTAATCACA +
Preference number: 5 (lower is better)
Translates to: VNNEETRNVAPKCAPHHGASSSG*FWLLIT
Trigger: TGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGC...TCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTCTCCTCATTGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CTTCTTTATTTCAGAACAAGCATGCTTATATGTACAGAAGAGAGAACTATGGAGGAGCGAGACTGCAGGTaGGAGGAACGGCGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: LLYFRTSMLICTEERTMEERDCR*EERRAH
Trigger: GTGGGCACGCCGTTCCTCCAACCTGCAGTCTCGCTC...CTCCATAGTTCTCTCTTCTGTACATATAAGCATGCTTGTTCTGAAATAAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263066.11
ENST00000372056.8
ENST00000372066.8
ENST00000542786.2
ENST00000623007.3
CDS-3UTR CAA 90 bp AATTTGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACCTTTCCCTTGACCTTTACAGGCCAATGGGGTaGTTATATTGCCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: NLAKRGLLRSVSNLSLDLYRPMG*LYCLGW
Trigger: CCAGCCGAGGCAATATAACAACCCCATTGGCCTGTA...AAGGTCAAGGGAAAGGTTTGAAACGGAACGTAACAGCCCACGTTTTGCCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542786.2
CDS-3UTR CAA 90 bp TCGAGGCATCATGGTGTTTGCCAGCTTTTAAAAATGATCAGGATGTCAGAAAGCTTCCCAAAAGGCTTCTaGCAGGCCGCACAGACGAAG +
Preference number: 5 (lower is better)
Translates to: SRHHGVCQLLKMIRMSESFPKGF*QAAQTK
Trigger: CTTCGTCTGTGCGGCCTGCAAGAAGCCTTTTGGGAA...GCTTTCTGACATCCTGATCATTTTTAAAAGCTGGCAAACACCATGATGCCTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR CAA 90 bp GACGTCATAAGTGAGCAGTCACAAGTTGGGGTGAAATTCATGCACACGACTGGAAGCAAGTGTATCGCTTaGGGAAAGCTGCTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: DVISEQSQVGVKFMHTTGSKCIA*GKLLVA
Trigger: AGCAACAAGCAGCTTTCCCAAAGCGATACACTTGCT...TCCAGTCGTGTGCATGAATTTCACCCCAACTTGTGACTGCTCACTTATGACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTCAGCAGTTAACACAATaGTACAAACTCAGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PPRVWACEPILPSCFRHCQQLTQ*YKLSVL
Trigger: CAGCACACTGAGTTTGTACAATTGTGTTAACTGCTG...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTAGCCTCCCGAATCCTTaGTTGCCAGCAGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFSLPNP*LPAAGA
Trigger: TGCTCCTGCTGCTGGCAACAAAGGATTCGGGAGGCT...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGTTTGGCACTTCAATTaGTTTGCCAGGGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQVWHFN*FARGAL
Trigger: AAGCGCTCCCCTGGCAAACAAATTGAAGTGCCAAAC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGCCTCATCTTCTGGCTaGTTCTGGCTCTTAATCACA +
Preference number: 5 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQASSSG*FWLLIT
Trigger: TGTGATTAAGAGCCAGAACAAGCCAGAAGATGAGGC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp TGTGATGTATCGAGGCATCATGGTGTTTGCCAGCTTTTAAAAATGATCAGGATGTCGCAGCCATGGCACTaGGTGCTGAACAGATTGATG +
Preference number: 5 (lower is better)
Translates to: CDVSRHHGVCQLLKMIRMSQPWH*VLNRLM
Trigger: CATCAATCTGTTCAGCACCAAGTGCCATGGCTGCGA...CATCCTGATCATTTTTAAAAGCTGGCAAACACCATGATGCCTCGATACATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGGGCACTTCAATTTGTTaGCCAGGGGAGCGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKGTSIC*PGERLR
Trigger: TCTTAAGCGCTCCCCTGGCAAACAAATTGAAGTGCC...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp CCACCCAGAGTTTGGGCATGTGAGCCTATTCTGCCATCCTGTTTCAGACACTGTACATGCAAAATATTTTaGTGCACACCTTTAACAGGC +
Preference number: 5 (lower is better)
Translates to: PPRVWACEPILPSCFRHCTCKIF*CTPLTG
Trigger: GCCTGTTAAAGGTGTGCACAAAAATATTTTGCATGT...ACAGTGTCTGAAACAGGATGGCAGAATAGGCTCACATGCCCAAACTCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GTGGCAGAAAGTAAGTTTCCTCTTCCCCACCCAGAGTTTGGGCATGTGAGCCTAACATGCAAAATATTTTaGTGCACACCTTTAACAGGC +
Preference number: 5 (lower is better)
Translates to: VAESKFPLPHPEFGHVSLTCKIF*CTPLTG
Trigger: GCCTGTTAAAGGTGTGCACAAAAATATTTTGCATGT...TAGGCTCACATGCCCAAACTCTGGGTGGGGAAGAGGAAACTTACTTTCTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTTACAGGCCAATGGGGTaGTTATATTGCCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFYRPMG*LYCLGW
Trigger: CCAGCCGAGGCAATATAACAACCCCATTGGCCTGTA...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGACTTCCCCCATAATTTaGGTGTTGCACTTGGCACAC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKTSPII*VLHLAH
Trigger: GTGTGCCAAGTGCAACACCAAAATTATGGGGGAAGT...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGTGCAGCGAGTGCTGTTaGGCACTTCAATTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKCSECC*ALQFVC
Trigger: GCAAACAAATTGAAGTGCCAAACAGCACTCGCTGCA...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp TCCAAATGTAAACTTGAGCTAGACACGGCCTTACTCCTGACACTACACCAGACTATAACTAGCTTGGTTTaGAGTCTTCATTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SKCKLELDTALLLTLHQTITSLV*SLHLAP
Trigger: AGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTAT...AGTCTGGTGTAGTGTCAGGAGTAAGGCCGTGTCTAGCTCAAGTTTACATTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AGAAGACATCTCTTTGGACGTCCGGGCTCCCAAGAAGGTTTTAAGTTTGTTCAAGTTTTGAGTCTTCATTaGGCTCCTAGTCTGAACTAT +
Preference number: 5 (lower is better)
Translates to: RRHLFGRPGSQEGFKFVQVLSLH*APSLNY
Trigger: ATAGTTCAGACTAGGAGCCAAATGAAGACTCAAAAC...TTGAACAAACTTAAAACCTTCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGCTTTGGGAAAGCTGCTaGTTGCTTTTCACTTTTGAG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKLWESC*LLFTFE
Trigger: CTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCAAAG...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCTTTGGGAAAGCTGCTaGTTGCTTTTCACTTTTGAG +
Preference number: 5 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYLWESC*LLFTFE
Trigger: CTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCAAAG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCCTTTAAAAAGGCTAGTTTTGTCTTTTaGGCAAATAGGAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVCKPFKKASFVF*ANRSPS
Trigger: TGAGGGACTCCTATTTGCCAAAAAGACAAAACTAGC...CTTTTTAAAGGGTTTACACACACACACACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATATAACTAGCTTGGTTTaGAGTCTTCATTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYITSLV*SLHLAP
Trigger: AGGAGCCAAATGAAGACTCAAAACCAAGCTAGTTAT...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTTGGGAAAGCTGCTTGTaGCTTTTCACTTTTGAGTTC +
Preference number: 5 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFWESCL*LFTFEF
Trigger: GAACTCAAAAGTGAAAAGCAACAAGCAGCTTTCCCA...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp AAAGGGAAGCGACTACACTGTTTCCAACCACAGAATCTAAGCTGCCTTCTTTATCATTTAAAGGAACATTaGAAAAGGATGATGCAGACC +
Preference number: 5 (lower is better)
Translates to: KGKRLHCFQPQNLSCLLYHLKEH*KRMMQT
Trigger: GGTCTGCATCATCCTTTTCAAATGTTCCTTTAAATG...ATAAAGAAGGCAGCTTAGATTCTGTGGTTGGAAACAGTGTAGTCGCTTCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGCTAGTTTTGTCTTTTaGGCAAATAGGAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFASFVF*ANRSPS
Trigger: TGAGGGACTCCTATTTGCCAAAAAGACAAAACTAGC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS-3UTR CAA 90 bp GACAAGAAATGTAGCTCCAAAGTGTGCTCCCCACCATGGATTATGAAAAATTTTGTTTTGAGTCTTCATTaGGCTCCTAGTCTGAACTAT +
Preference number: 5 (lower is better)
Translates to: DKKCSSKVCSPPWIMKNFVLSLH*APSLNY
Trigger: ATAGTTCAGACTAGGAGCCAAATGAAGACTCAAAAC...AAAATTTTTCATAATCCATGGTGGGGAGCACACTTTGGAGCTACATTTCTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS GCA 72 bp GCCTGGGCTGGCCCTCGCCTCAGGGCTGGGGCTGGGTaGCACCAGGCTGCCGTTCGTGTCCAGAGCGGGGTC +
Preference number: 6 (lower is better)
Translates to: AWAGPRLRAGAG*HQAAVRVQSGV
Trigger: GACCCCGCTCTGGACACGAACGGCAGCCTGGTGGCACCCAGCCCCAGCCCTGAGGCGAGGGCCAGCCCAGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CCA 72 bp CTTTTGGGCCGAGTAGGTCCCGGGCCCCCTCTGGGCTaGTCTTGGCCCTCAGGCTGGCCCGCGGAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: LLGRVGPGPPLG*SWPSGWPAEGQ
Trigger: CTGGCCCTCCGCGGGCCAGCCTGAGGGCCAAGACCAGCCCAGAGGGGGCCCGGGACCTACTCGGCCCAAAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS GCA 72 bp CCCTCGCCTCAGGGCTGGGGCTGGGTGCCACCAGGCTaGCGTTCGTGTCCAGAGCGGGGTCCTTCTGGTGAG +
Preference number: 6 (lower is better)
Translates to: PSPQGWGWVPPG*RSCPERGPSGE
Trigger: CTCACCAGAAGGACCCCGCTCTGGACACGAACGGCAGCCTGGTGGCACCCAGCCCCAGCCCTGAGGCGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CCA 72 bp GCTTGGGTGCAGGGGCGGCGGGGCCCTCACTGTAGCTaGTGTGGGTGGCAGGTGCTGAAGAGGCGGCCACTG +
Preference number: 6 (lower is better)
Translates to: AWVQGRRGPHCS*CGWQVLKRRPL
Trigger: CAGTGGCCGCCTCTTCAGCACCTGCCACCCACACCAGCTACAGTGAGGGCCCCGCCGCCCCTGCACCCAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CCA 72 bp TCGCTCAGCCCTCTGGACGGTCCCCCTGGCAAGTGGTaGCACCTGAGGACCCGCTGGGGTGTAGGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SLSPLDGPPGKW*HLRTRWGVGWA
Trigger: GGCCCAGCCTACACCCCAGCGGGTCCTCAGGTGCCACCACTTGCCAGGGGGACCGTCCAGAGGGCTGAGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CCA 72 bp GGGAGAAGCTATCATCTGTCACCCAGGGTGGACGGCTaGCAGGCTCCGCAGGGCCCCCGCTGTAGGCCACCG +
Preference number: 6 (lower is better)
Translates to: GRSYHLSPRVDG*QAPQGPRCRPP
Trigger: CGGTGGCCTACAGCGGGGGCCCTGCGGAGCCTGCCAGCCGTCCACCCTGGGTGACAGATGATAGCTTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CAA 72 bp TATATTGCCTCGGCTGGCTCGAGCCCGGCAGGGCTTTaGGGCCGAGTAGGTCCCGGGCCCCCTCTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: YIASAGSSPAGL*GRVGPGPPLGW
Trigger: CCAGCCCAGAGGGGGCCCGGGACCTACTCGGCCCAAAAGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS GCA 72 bp CTGGTGCTGTCAGCGGCCGCCTGTTCTGTCCCTTGCTaGCCAGCCGGGCTGCGTGGAGCTCTTGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: LVLSAAACSVPC*PAGLRGALERL
Trigger: GAGCCTCTCAAGAGCTCCACGCAGCCCGGCTGGGCAGCAAGGGACAGAACAGGCGGCCGCTGACAGCACCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623056.4
CDS CCA 72 bp GCCTTGGGCTGTCGGCAGGACTTGAAGCAGGGGCTGTaGTGGAGGCGGAGGCGATGGCAGTGTGGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: ALGCRQDLKQGL*WRRRRWQCGQQ
Trigger: CTGCTGCCCACACTGCCATCGCCTCCGCCTCCACCACAGCCCCTGCTTCAAGTCCTGCCGACAGCCCAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS CCA 72 bp GAATCGCTCAGCCCTCTGGACGGTCCCCCTGGCAAGTaGTGGCACCTGAGGACCCGCTGGGGTGTAGGCTGG +
Preference number: 6 (lower is better)
Translates to: ESLSPLDGPPGK*WHLRTRWGVGW
Trigger: CCAGCCTACACCCCAGCGGGTCCTCAGGTGCCACCACTTGCCAGGGGGACCGTCCAGAGGGCTGAGCGATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CCA 72 bp TGGCTGGGAATCGCTCAGCCCTCTGGACGGTCCCCCTaGCAAGTGGTGGCACCTGAGGACCCGCTGGGGTGT +
Preference number: 6 (lower is better)
Translates to: WLGIAQPSGRSP*QVVAPEDPLGC
Trigger: ACACCCCAGCGGGTCCTCAGGTGCCACCACTTGCCAGGGGGACCGTCCAGAGGGCTGAGCGATTCCCAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CCA 72 bp GTTGCAGTGACCGCAGAGTGGAGTCCGGCTGCTGGCTaGGAATCGCTCAGCCCTCTGGACGGTCCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: VAVTAEWSPAAG*ESLSPLDGPPG
Trigger: GCCAGGGGGACCGTCCAGAGGGCTGAGCGATTCCCAGCCAGCAGCCGGACTCCACTCTGCGGTCACTGCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS TCA 72 bp GGGTGGACAGGGCCGAGTCCTTCAGGGCACTGGGGTTaGAGCGTTCCTGGTAGTCGGCGCCTCCTGGGAGTC +
Preference number: 6 (lower is better)
Translates to: GWTGPSPSGHWG*SVPGSRRLLGV
Trigger: GACTCCCAGGAGGCGCCGACTACCAGGAACGCTTCAACCCCAGTGCCCTGAAGGACTCGGCCCTGTCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372056.8
ENST00000623056.4
CDS GCA 72 bp AGGGCCCGGGCCCAGTCAGGGTCACACTGTAAGACATaGTGGTGCTGTCAGCGGCCGCCTCTGTTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: RARAQSGSHCKT*WCCQRPPLFCP
Trigger: GGGACAGAACAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263066.11
ENST00000361373.9
ENST00000429277.7
CDS CCA 72 bp CATTGTTGCAGTGACCGCAGAGTGGAGTCCGGCTGCTaGCTGGGAATCGCTCAGCCCTCTGGACGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: HCCSDRRVESGC*LGIAQPSGRSP
Trigger: GGGGGACCGTCCAGAGGGCTGAGCGATTCCCAGCCAGCAGCCGGACTCCACTCTGCGGTCACTGCAACAATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CAA 72 bp CAGGAGCAGCTCCGGGCCTCGTCAGCACAGGCGGCCTaGGCCGCCTACAAGTTGATGGTGTGTGCGTGCTTC +
Preference number: 6 (lower is better)
Translates to: QEQLRASSAQAA*AAYKLMVCACF
Trigger: GAAGCACGCACACACCATCAACTTGTAGGCGGCCAAGGCCGCCTGTGCTGACGAGGCCCGGAGCTGCTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS CAA 90 bp TGCCAGCAGCAGGAGCAGCTCCGGGCCTCGTCAGCACAGGCGGCCTaGGCCGCCTACAAGTTGATGGTGTGTGCGTGCTTCTTGCACAGG +
Preference number: 6 (lower is better)
Translates to: CQQQEQLRASSAQAA*AAYKLMVCACFLHR
Trigger: CCTGTGCAAGAAGCACGCACACACCATCAACTTGTAGGCGGCCAAGGCCGCCTGTGCTGACGAGGCCCGGAGCTGCTCCTGCTGCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS GCA 72 bp AGCGGGGTGGTGGCCTGGCTGGTGCACACCGGCGCATaGTCAATAGGGGTGCTTGACCTTCGCAGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SGVVAWLVHTGA*SIGVLDLRRAS
Trigger: AGAAGCTCTGCGAAGGTCAAGCACCCCTATTGAGCATGCGCCGGTGTGCACCAGCCAGGCCACCACCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361373.9
CDS GCA 72 bp AGGGCCCGGGCCCAGTCAGGGTCACACTGTAAGACATaGTGGTGCTGTCAGCGGCCGCCTCTGCAGACAAAG +
Preference number: 6 (lower is better)
Translates to: RARAQSGSHCKT*WCCQRPPLQTK
Trigger: CTTTGTCTGCAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372066.8
CDS GCA 72 bp AGGGCCCGGGCCCAGTCAGGGTCACACTGTAAGACATaGTGGTGCTGTCAGCGGCCGCCTGTTCTGTCCCTT +
Preference number: 6 (lower is better)
Translates to: RARAQSGSHCKT*WCCQRPPVLSL
Trigger: AAGGGACAGAACAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623056.4
CDS CCA 72 bp GCCCGGGCCCAGTCAGGGTCACACTGTAAGACATGCTaGTGCTGTCAGCGGCCGCCTCTGTTCTGTCCCTTG +
Preference number: 6 (lower is better)
Translates to: ARAQSGSHCKTC*CCQRPPLFCPL
Trigger: CAAGGGACAGAACAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263066.11
ENST00000361373.9
ENST00000429277.7
CDS CCA 72 bp GGAGGGGGTGTAGGGAGTGGGACTGTAATTGGCCCCTaGGGACGGGCTGTAGGTAGATGCAGGCACTGGCTG +
Preference number: 6 (lower is better)
Translates to: GGGVGSGTVIGP*GRAVGRCRHWL
Trigger: CAGCCAGTGCCTGCATCTACCTACAGCCCGTCCCCAGGGGCCAATTACAGTCCCACTCCCTACACCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CCA 72 bp TGGGCCCCGGATGACATTGTTGCAGTGACCGCAGAGTaGAGTCCGGCTGCTGGCTGGGAATCGCTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: WAPDDIVAVTAE*SPAAGWESLSP
Trigger: AGGGCTGAGCGATTCCCAGCCAGCAGCCGGACTCCACTCTGCGGTCACTGCAACAATGTCATCCGGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CCA 72 bp GCCCGGGCCCAGTCAGGGTCACACTGTAAGACATGCTaGTGCTGTCAGCGGCCGCCTCTGCAGACAAAGGGT +
Preference number: 6 (lower is better)
Translates to: ARAQSGSHCKTC*CCQRPPLQTKG
Trigger: ACCCTTTGTCTGCAGAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372066.8
CDS CCA 72 bp GCCCGGGCCCAGTCAGGGTCACACTGTAAGACATGCTaGTGCTGTCAGCGGCCGCCTGTTCTGTCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: ARAQSGSHCKTC*CCQRPPVLSLA
Trigger: AGCAAGGGACAGAACAGGCGGCCGCTGACAGCACCAGCATGTCTTACAGTGTGACCCTGACTGGGCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623056.4
CDS TCA 72 bp CCCGAGGCCTTCCCTCGGAGGCTCATCTGGTACATCTaGGCCATCTCCCTCAGGGTCTCTGCCGAGTACAGG +
Preference number: 6 (lower is better)
Translates to: PEAFPRRLIWYI*AISLRVSAEYR
Trigger: CCTGTACTCGGCAGAGACCCTGAGGGAGATGGCTCAGATGTACCAGATGAGCCTCCGAGGGAAGGCCTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CCA 72 bp AAACTTCTGGGAGAAGCTATCATCTGTCACCCAGGGTaGACGGCTGGCAGGCTCCGCAGGGCCCCCGCTGTA +
Preference number: 6 (lower is better)
Translates to: KLLGEAIICHPG*TAGRLRRAPAV
Trigger: TACAGCGGGGGCCCTGCGGAGCCTGCCAGCCGTCCACCCTGGGTGACAGATGATAGCTTCTCCCAGAAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CAA 72 bp TCCCTCAGGGTCTCTGCCGAGTACAGGCCAATGGGGTaGTTATATTGCCTCGGCTGGCTCGAGCCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: SLRVSAEYRPMG*LYCLGWLEPGR
Trigger: CCTGCCGGGCTCGAGCCAGCCGAGGCAATATAACAACCCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS TCA 72 bp TGTTCTGGGCTTCCAGGTGGGTCATGGTGTCTGTGTTaGCGCCGTCAATGGCCACCACGAGGTCACCCTGGC +
Preference number: 6 (lower is better)
Translates to: CSGLPGGSWCLC*RRQWPPRGHPG
Trigger: GCCAGGGTGACCTCGTGGTGGCCATTGACGGCGTCAACACAGACACCATGACCCACCTGGAAGCCCAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263066.11
ENST00000361373.9
ENST00000372056.8
ENST00000372066.8
ENST00000429277.7
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS TCA 72 bp CCTCGTCAGCACAGGCGGCCTTGGCCGCCTACAAGTTaGTGGTGTGTGCGTGCTTCTTGCACAGGGGTCTGT +
Preference number: 6 (lower is better)
Translates to: PRQHRRPWPPTS*WCVRASCTGVC
Trigger: ACAGACCCCTGTGCAAGAAGCACGCACACACCATCAACTTGTAGGCGGCCAAGGCCGCCTGTGCTGACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361373.9
ENST00000429277.7
CDS GCA 72 bp GTCTCTGCCGAGTACAGGCCAATGGGGTTGTTATATTaGCTCGGCTGGCTCGAGCCCGGCAGGGCTTTTGGG +
Preference number: 6 (lower is better)
Translates to: VSAEYRPMGLLY*LGWLEPGRAFG
Trigger: CCCAAAAGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAACAACCCCATTGGCCTGTACTCGGCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CCA 72 bp GAGTACAGGCCAATGGGGTTGTTATATTGCCTCGGCTaGCTCGAGCCCGGCAGGGCTTTTGGGCCGAGTAGG +
Preference number: 6 (lower is better)
Translates to: EYRPMGLLYCLG*LEPGRAFGPSR
Trigger: CCTACTCGGCCCAAAAGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAACAACCCCATTGGCCTGTACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CCA 72 bp CCATCTCCCTCAGGGTCTCTGCCGAGTACAGGCCAATaGGGTTGTTATATTGCCTCGGCTGGCTCGAGCCCG +
Preference number: 6 (lower is better)
Translates to: PSPSGSLPSTGQ*GCYIASAGSSP
Trigger: CGGGCTCGAGCCAGCCGAGGCAATATAACAACCCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CAA 72 bp GGTCTCTGCCGAGTACAGGCCAATGGGGTTGTTATATaGCCTCGGCTGGCTCGAGCCCGGCAGGGCTTTTGG +
Preference number: 6 (lower is better)
Translates to: GLCRVQANGVVI*PRLARARQGFW
Trigger: CCAAAAGCCCTGCCGGGCTCGAGCCAGCCGAGGCAATATAACAACCCCATTGGCCTGTACTCGGCAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CAA 72 bp GTGTCGTGCCAAGTGTGGCCCAGGGCTTCGATAAACTaGTCGCCAGCCTCCACGGGGAAATCGCAGCCATGG +
Preference number: 6 (lower is better)
Translates to: VSCQVWPRASIN*SPASTGKSQPW
Trigger: CCATGGCTGCGATTTCCCCGTGGAGGCTGGCGACAAGTTTATCGAAGCCCTGGGCCACACTTGGCACGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000477489.1
ENST00000623056.4
CDS TCA 72 bp GCTACCAGAAATGGGCCCCGGATGACATTGTTGCAGTaGCCGCAGAGTGGAGTCCGGCTGCTGGCTGGGAAT +
Preference number: 6 (lower is better)
Translates to: ATRNGPRMTLLQ*PQSGVRLLAGN
Trigger: ATTCCCAGCCAGCAGCCGGACTCCACTCTGCGGTCACTGCAACAATGTCATCCGGGGCCCATTTCTGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS CAA 72 bp TTGTTCTGGGCTTCCAGGTGGGTCATGGTGTCTGTGTaGACGCCGTCAATGGCCACCACGAGGTCACCCTGG +
Preference number: 6 (lower is better)
Translates to: LFWASRWVMVSV*TPSMATTRSPW
Trigger: CCAGGGTGACCTCGTGGTGGCCATTGACGGCGTCAACACAGACACCATGACCCACCTGGAAGCCCAGAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263066.11
ENST00000361373.9
ENST00000372056.8
ENST00000372066.8
ENST00000429277.7
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CAA 90 bp GACTTGATCTTGTTCTGGGCTTCCAGGTGGGTCATGGTGTCTGTGTaGACGCCGTCAATGGCCACCACGAGGTCACCCTGGCTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: DLILFWASRWVMVSV*TPSMATTRSPWLSW
Trigger: CCAGCTCAGCCAGGGTGACCTCGTGGTGGCCATTGACGGCGTCAACACAGACACCATGACCCACCTGGAAGCCCAGAACAAGATCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263066.11
ENST00000361373.9
ENST00000372056.8
ENST00000372066.8
ENST00000429277.7
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS GCA 72 bp GGCTTCTTGCAGGCCGCACAGACGAAGCAGGTGGTGTaGCATGTCTGTCTCAAGGCATGCATTACTTCCCCC +
Preference number: 6 (lower is better)
Translates to: GFLQAAQTKQVV*HVCLKACITSP
Trigger: GGGGGAAGTAATGCATGCCTTGAGACAGACATGGCACACCACCTGCTTCGTCTGTGCGGCCTGCAAGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS TCA 72 bp AAGCCAGAGCCCCAAGCTAGAGACATACTGCGCAAATaGAGCAGGTGTCGTGCCAAGTGTGGCCCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: KPEPQARDILRK*SRCRAKCGPGL
Trigger: AAGCCCTGGGCCACACTTGGCACGACACCTGCTTCATTTGCGCAGTATGTCTCTAGCTTGGGGCTCTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477489.1
CDS CCA 72 bp ACTGGGGTTGAAGCGTTCCTGGTAGTCGGCGTTGGCTaGAGAGTTGACTACCACCTTCTGGTGAGGGATCAC +
Preference number: 6 (lower is better)
Translates to: TGVEAFLVVGVG*RVDYHLLVRDH
Trigger: GTGATCCCTCACCAGAAGGTGGTAGTCAACTCTCCAGCCAACGCCGACTACCAGGAACGCTTCAACCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263066.11
ENST00000372066.8
ENST00000429277.7
CDS TCA 72 bp ACACATCTGCCAGGGAAGTCTTGCAGTAGGCACAGGTaGACTCTTCAGGGTGCCAAGAACGGCCCATGGCTA +
Preference number: 6 (lower is better)
Translates to: THLPGKSCSRHR*TLQGAKNGPWL
Trigger: TAGCCATGGGCCGTTCTTGGCACCCTGAAGAGTTCACCTGTGCCTACTGCAAGACTTCCCTGGCAGATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS GCA 72 bp TTCACATGGCAGACTGCGCAAATGAAGCAGGTGTCGTaGCAAGTGTGGCCCAGGGCTTCGATAAACTTGTCG +
Preference number: 6 (lower is better)
Translates to: FTWQTAQMKQVS*QVWPRASINLS
Trigger: CGACAAGTTTATCGAAGCCCTGGGCCACACTTGGCACGACACCTGCTTCATTTGCGCAGTCTGCCATGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS GCA 72 bp CATCTGGTACATCTGAGCCATCTCCCTCAGGGTCTCTaGCGAGTACAGGCCAATGGGGTTGTTATATTGCCT +
Preference number: 6 (lower is better)
Translates to: HLVHLSHLPQGL*RVQANGVVILP
Trigger: AGGCAATATAACAACCCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAGATGGCTCAGATGTACCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361373.9
ENST00000372056.8
ENST00000542786.2
ENST00000623007.3
ENST00000623056.4
CDS CCA 72 bp CAAAAGGCTTCTTGCAGGCCGCACAGACGAAGCAGGTaGTGTGCCATGTCTGTCTCAAGGCATGCATTACTT +
Preference number: 6 (lower is better)
Translates to: QKASCRPHRRSR*CAMSVSRHALL
Trigger: AAGTAATGCATGCCTTGAGACAGACATGGCACACCACCTGCTTCGTCTGTGCGGCCTGCAAGAAGCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4
CDS GCA 72 bp GTAAACGTTGTTCTGCTCTTCCACAAAGCACACATCTaGCAGGGAAGTCTTGCAGTAGGCACAGGTGAACTC +
Preference number: 6 (lower is better)
Translates to: VNVVLLFHKAHI*QGSLAVGTGEL
Trigger: GAGTTCACCTGTGCCTACTGCAAGACTTCCCTGGCAGATGTGTGCTTTGTGGAAGAGCAGAACAACGTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361373.9
ENST00000429277.7
ENST00000623056.4