RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LDAH (Homo sapiens)

Ensembl gene IDs: ENSG00000118961

Ensembl transcript IDs: ENST00000237822.8, ENST00000381090.7, ENST00000402479.6, ENST00000403006.6, ENST00000412261.5, ENST00000419825.2, ENST00000432947.1, ENST00000435420.6, ENST00000440866.6, ENST00000541941.5, ENST00000619656.4, ENST00000626491.2

Found 695 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTaGGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACA +
Preference number: 1 (lower is better)
Translates to: LVVRVSPKVEWRSVW*EALGGHGHQATQAT
Trigger: TGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR CCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTaGGAACAGACTAGGAACAAACACGGGTGTGGTCAAAGCTCAATC +
Preference number: 1 (lower is better)
Translates to: IRPHKPQRACGDAYG*EQTRNKHGCGQSSI
Trigger: GATTGAGCTTTGACCACACCCGTGTTTGTTCCTAGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR TCA 90 bp ATGAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTaGGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACA +
Preference number: 1 (lower is better)
Translates to: MKKNQAFGGPCLSKG*VEKRMVRGPWWPWT
Trigger: TGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR GCA 90 bp GAGCCGAGTCTAACTCAGGAGAACTGCTCAAATTGTACCCTCTCTTaGCCAACACAGAGATCAGGCCAGACCAGGTCAGAAATGCTGGTA +
Preference number: 1 (lower is better)
Translates to: EPSLTQENCSNCTLS*PTQRSGQTRSEMLV
Trigger: TACCAGCATTTCTGACCTGGTCTGGCCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATTTGAGCAGTTCTCCTGAGTTAGACTCGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR GCA 90 bp GCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCTGTaGTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCCATGCC +
Preference number: 1 (lower is better)
Translates to: ALLSSNIAIKSCSLL*YSFCLLYLCTHLHA
Trigger: GGCATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR GCA 90 bp TCCTGGCTCTCTCTCCAGCTCTCAAAGTCCCTCTCAAACTGGCCCTaGTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: SWLSLQLSKSLSNWP*LAVTSLLNLAPFCA
Trigger: AGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAGGGACTTTGAGAGCTGGAGAGAGAGCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR CCA 90 bp ATGGAGTCCTGGCTCTCTCTCCAGCTCTCAAAGTCCCTCTCAAACTaGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTC +
Preference number: 1 (lower is better)
Translates to: MESWLSLQLSKSLSN*PCLAVTSLLNLAPF
Trigger: GAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAGGGACTTTGAGAGCTGGAGAGAGAGCCAGGACTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR GCA 90 bp CCTCTCAAACTGGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTaGTCCCTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACC +
Preference number: 1 (lower is better)
Translates to: PLKLALLSSNIAIKS*SLLCYSFCLLYLCT
Trigger: GGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR GCA 90 bp TCACAAAGACCATCCATGTGGTTGACTGGGACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTCTTCCACTGTTTGTCCATTTTAGTC +
Preference number: 1 (lower is better)
Translates to: SQRPSMWLTGTYRQS*FWKMDFFHCLSILV
Trigger: GACTAAAATGGACAAACAGTGGAAGAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGTCCCAGTCAACCACATGGATGGTCTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR CCA 90 bp CTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTaGGACATACAGGCAGAGCTGCTTCTGGAAAATGGATTTCTTCCA +
Preference number: 1 (lower is better)
Translates to: LQEVKTFTKTIHVVD*DIQAELLLENGFLP
Trigger: TGGAAGAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR TCA 90 bp GCAATCATGTCTGCCATTTCCTGGTTAAAATGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAGAGTCGAATGTCTCCTTCTGGAAAA +
Preference number: 1 (lower is better)
Translates to: AIMSAISWLKWVMKA*GMFFSQSRMSPSGK
Trigger: TTTTCCAGAAGGAGACATTCGACTCTGTGAGAAAAACATACCTCATGCTTTCATCACCCATTTTAACCAGGAAATGGCAGACATGATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR TCA 90 bp CAGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTaGAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCTT +
Preference number: 1 (lower is better)
Translates to: QYKQGHSLTSSQYNH*NQKINSGILLPANL
Trigger: AAGATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR GCA 90 bp AACAGTGAACATGCTAGAATTCTCACAGATTTAAAGGAGGTAGTTTaGATCTCCATGGTATTACTTCTTCCATTTAGAAACCTTCCAGCA +
Preference number: 1 (lower is better)
Translates to: NSEHARILTDLKEVV*ISMVLLLPFRNLPA
Trigger: TGCTGGAAGGTTTCTAAATGGAAGAAGTAATACCATGGAGATGCAAACTACCTCCTTTAAATCTGTGAGAATTCTAGCATGTTCACTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR-3UTR CCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATTTGCTGGTTGTCCTGTaGCAGGAGGCACAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDLLVVL*QEAQLG
Trigger: CCCCAACTGTGCCTCCTGCCACAGGACAACCAGCAA...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTGGCCCTTGGTGGCCATaGACATCAGGCCACACAAGC +
Preference number: 2 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTGPWWP*TSGHTS
Trigger: GCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCC...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR CAA 90 bp GTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTaGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: VSLQRLSGEAYGERP*VAMDIRPHKPQRAC
Trigger: ACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGTTGCTGGTTGTCCTGTaGCAGGAGGCACAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMLLVVL*QEAQLG
Trigger: CCCCAACTGTGCCTCCTGCCACAGGACAACCAGCAA...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCGTGAGAGGCCCTTGGTaGCCATGGACATCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLVRGPW*PWTSGH
Trigger: GTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCAC...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGTGGAGAGGAGGAGCCTaGAGGGAGCTTATAACCTGG +
Preference number: 2 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMWRGGA*RELITW
Trigger: CCAGGTTATAAGCTCCCTGCAGGCTCCTCCTCTCCA...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGCTCATCCTCCCAAGGTaGTGGGATCACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMLILPR*WDHRCE
Trigger: CTCACACCTGTGATCCCAGCACCTTGGGAGGATGAG...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMTASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTTASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGAGGGAGCTTATAACCTaGGAGGCTAAGGCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKRELIT*EAKAQH
Trigger: ATGCTGAGCCTTAGCCTCCCAGGTTATAAGCTCCCT...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATAGGGAGCTTATAACCTaGGAGGCTAAGGCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDRELIT*EAKAQH
Trigger: ATGCTGAGCCTTAGCCTCCCAGGTTATAAGCTCCCT...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACCTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 2 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDLSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGAGGGCTTGTGGAGATaGTTATGGCTGGGAACAGAC +
Preference number: 2 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMEGLWR*LWLGTD
Trigger: GTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTC...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCCTCATCCTCCCAAGGTaGTGGGATCACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLLILPR*WDHRCE
Trigger: CTCACACCTGTGATCCCAGCACCTTGGGAGGATGAG...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGTTGCTGGTTGTCCTGTaGCAGGAGGCACAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLLLVVL*QEAQLG
Trigger: CCCCAACTGTGCCTCCTGCCACAGGACAACCAGCAA...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCGCCACAGAGGGCTTGTaGAGATGCTTATGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLATEGL*RCLWLG
Trigger: TCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGC...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGTCCATGTACTGGCAGTaGGGGCTTGTTCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLSMYWQ*GLVPQA
Trigger: GGCCTGAGGAACAAGCCCCCACTGCCAGTACATGGA...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
3UTR-3UTR CCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGAGGGAGCTTATAACCTaGGAGGCTAAGGCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMRELIT*EAKAQH
Trigger: ATGCTGAGCCTTAGCCTCCCAGGTTATAAGCTCCCT...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGGAACTCCATCCTCAATaGCTAGCACACTATTTGGCT +
Preference number: 2 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKELHPQ*LAHYLA
Trigger: AGCCAAATAGTGTGCTAGCCATTGAGGATGGAGTTC...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR CAA 90 bp GATGAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTaGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGAC +
Preference number: 2 (lower is better)
Translates to: DEEKSSLWWSVSLQR*SGEAYGERPLVAMD
Trigger: GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATAGAAGTCACTTGCTGTaGTGTAGAAGCTATGCCAAA +
Preference number: 2 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDRSHLL*CRSYAK
Trigger: TTTGGCATAGCTTCTACATCACAGCAAGTGACTTCT...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATTTAAAAGAGAGACTTTaGGCCGAGTCTAACTCAGGA +
Preference number: 2 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDLKERL*AESNSG
Trigger: TCCTGAGTTAGACTCGGCTCAAAGTCTCTCTTTTAA...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAG +
Preference number: 2 (lower is better)
Translates to: LGGHGHQATQATEGLWRCWVMKA*GMFFSQ
Trigger: CTGTGAGAAAAACATACCTCATGCTTTCATCACCCA...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR-3UTR GCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGAATTGTACCCTCTCTTaGCCAACACAGAGATCAGGC +
Preference number: 2 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMNCTLS*PTQRSG
Trigger: GCCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATT...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTTCCATGTACTGGCAGTaGGGGCTTGTTCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSSMYWQ*GLVPQA
Trigger: GGCCTGAGGAACAAGCCCCCACTGCCAGTACATGGA...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
3UTR-3UTR CCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGTGGCGAGCGGAGAGTTaGTTTGTAAGACAAAGGTTC +
Preference number: 2 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMWRAES*FVRQRF
Trigger: GAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCA...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGTGGCGAGCGGAGAGTTaGTTTGTAAGACAAAGGTTC +
Preference number: 2 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMWRAES*FVRQRF
Trigger: GAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCA...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTCAAAGACCATCCATGTaGTTGACTGGGACATACAGG +
Preference number: 2 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTQRPSM*LTGTYR
Trigger: CCTGTATGTCCCAGTCAACCACATGGATGGTCTTTG...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGCAAAGACCATCCATGTaGTTGACTGGGACATACAGG +
Preference number: 2 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMQRPSM*LTGTYR
Trigger: CCTGTATGTCCCAGTCAACCACATGGATGGTCTTTG...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGCTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 2 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQLSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAATCCATGTACTGGCAGTaGGGGCTTGTTCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGESMYWQ*GLVPQA
Trigger: GGCCTGAGGAACAAGCCCCCACTGCCAGTACATGGA...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSTASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
3UTR-3UTR CCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCCATCCAAGCCTGCTTTaGGACAGCCCAGTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFHPSLL*DSPVPL
Trigger: GAGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATG...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTGAACTCCATCCTCAATaGCTAGCACACTATTTGGCT +
Preference number: 2 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTELHPQ*LAHYLA
Trigger: AGCCAAATAGTGTGCTAGCCATTGAGGATGGAGTTC...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTTTAAAAGAGAGACTTTaGGCCGAGTCTAACTCAGGA +
Preference number: 2 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTLKERL*AESNSG
Trigger: TCCTGAGTTAGACTCGGCTCAAAGTCTCTCTTTTAA...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCCACTGGGCATCTTGTaGAAACACAAGACTCTGTGT +
Preference number: 2 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLPLGIL*KHKTLC
Trigger: ACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCTGTGTACAGCCCTGTaGTTACGGCCTATGTATCTA +
Preference number: 2 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLLCTAL*LRPMYL
Trigger: TAGATACATAGGCCGTAAGCACAGGGCTGTACACAG...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTC +
Preference number: 2 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMTYRQS*FWKMDF
Trigger: GAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGT...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTC +
Preference number: 2 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTTYRQS*FWKMDF
Trigger: GAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGT...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: SAYNMASGELVCKTKVLTTASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
3UTR-3UTR CCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGTCCATGTACTGGCAGTaGGGGCTTGTTCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWSMYWQ*GLVPQA
Trigger: GGCCTGAGGAACAAGCCCCCACTGCCAGTACATGGA...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCTCCATGTACTGGCAGTaGGGGCTTGTTCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: YNMASGELVCKTKVLTFFSMYWQ*GLVPQA
Trigger: GGCCTGAGGAACAAGCCCCCACTGCCAGTACATGGA...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
3UTR-3UTR CCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGCACTTACCAATAAGTTaGCAGCAAATCAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMHLPIS*QQIRAK
Trigger: TTTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTG...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTCACTTACCAATAAGTTaGCAGCAAATCAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTHLPIS*QQIRAK
Trigger: TTTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTG...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR CAA 90 bp CCATGTACTGGCAGTGGGGGCTTGTTCCTCAGGCCAATTTACATTTaGGACAAGTCATCCTTTAGGGAGTCAGCAATCATGTCTGCCATT +
Preference number: 2 (lower is better)
Translates to: PCTGSGGLFLRPIYI*DKSSFRESAIMSAI
Trigger: AATGGCAGACATGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCTGAGGAACAAGCCCCCACTGCCAGTACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR-3UTR TCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAACTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 2 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGELSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGAGAAGTCACTTGCTGTaGTGTAGAAGCTATGCCAAA +
Preference number: 2 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLRSHLL*CRSYAK
Trigger: TTTGGCATAGCTTCTACATCACAGCAAGTGACTTCT...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGATGTCTGCCATTTCCTaGTTAAAATGGGTGATGAAA +
Preference number: 2 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMMSAIS*LKWVMK
Trigger: TTTCATCACCCATTTTAACCAGGAAATGGCAGACAT...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR-3UTR TCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 2 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTILSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTTGGAGAAGCGTATGGTaGGAGGCCCTTGGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFWRSVW*EALGGH
Trigger: ATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCA...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAGGCCCTTGGTGGCCATaGACATCAGGCCACACAAGC +
Preference number: 2 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRGPWWP*TSGHTS
Trigger: GCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCC...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAGTGAGAGGCCCTTGGTaGCCATGGACATCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRVRGPW*PWTSGH
Trigger: GTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCAC...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGATAAATGCTCCTTTATaGTTTCGTCATCTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQINAPL*FRHLSS
Trigger: TGAAGAGAGATGACGAAACCATAAAGGAGCATTTAT...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR-3UTR TCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCCTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 2 (lower is better)
Translates to: YNMASGELVCKTKVLTFFLSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
3UTR-3UTR GCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCGAGGGCTTGTGGAGATaGTTATGGCTGGGAACAGAC +
Preference number: 2 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSEGLWR*LWLGTD
Trigger: GTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTC...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: STTTEIRKLTVASYSQLITASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp TGGTATTACTTCTTCCATTTAGAAACCTTCCAGCATGGAGTCCTGGCTCTCTCTAAGTCCCTCTCAAACTaGCCCTGCTTAGCAGTAACA +
Preference number: 2 (lower is better)
Translates to: WYYFFHLETFQHGVLALSKSLSN*PCLAVT
Trigger: TGTTACTGCTAAGCAGGGCCAGTTTGAGAGGGACTT...AGAGAGAGCCAGGACTCCATGCTGGAAGGTTTCTAAATGGAAGAAGTAATACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR-3UTR TCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTGGGGGCTTTAGGATTTaGGCGGAGGGACATCTCATT +
Preference number: 2 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFGGFRI*AEGHLI
Trigger: AATGAGATGTCCCTCCGCTCAAATCCTAAAGCCCCC...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp TCCTCAGGCCAATTTACATTTTGGACAAGTCATCCTTTAGGGAGTCAGCAATCATGGCGAGCGGAGAGTTaGTTTGTAAGACAAAGGTTC +
Preference number: 2 (lower is better)
Translates to: SSGQFTFWTSHPLGSQQSWRAES*FVRQRF
Trigger: GAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCA...TGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR-3UTR CCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCGGAGCAACTGTACGTTaGCACATCCAAGCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSGATVR*HIQACF
Trigger: AAAGCAGGCTTGGATGTGCCAACGTACAGTTGCTCC...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTTCAAAGCTCAATCGCTaGGCACTCGGTAACTCTGCA +
Preference number: 2 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFSKLNR*ALGNSA
Trigger: TGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGA...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCTGTGTACAGCCCTGTaGTTACGGCCTATGTATCTA +
Preference number: 2 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSLCTAL*LRPMYL
Trigger: TAGATACATAGGCCGTAAGCACAGGGCTGTACACAG...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGATGTCTCTCCAAAGGTTaGGTGGAGAAGCGTATGGTG +
Preference number: 2 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRCLSKG*VEKRMV
Trigger: CACCATACGCTTCTCCACTCAACCTTTGGAGAGACA...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCAAATCAAGCCTTTGGTaGTCCGTGTCTCTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: STTTEIRKLTVASYSQLIKSSLW*SVSLQR
Trigger: CCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCTCGAATGTCTCCTTCTaGAAAATCCTTCTTAATGTC +
Preference number: 2 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFSNVSF*KILLNV
Trigger: GACATTAAGAAGGATTTTCCAGAAGGAGACATTCGA...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR-3UTR TCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCTTAAAAGAGAGACTTTaGGCCGAGTCTAACTCAGGA +
Preference number: 2 (lower is better)
Translates to: STTTEIRKLTVASYSQLILKERL*AESNSG
Trigger: TCCTGAGTTAGACTCGGCTCAAAGTCTCTCTTTTAA...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTC +
Preference number: 2 (lower is better)
Translates to: STTTEIRKLTVASYSQLITYRQS*FWKMDF
Trigger: GAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGT...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR TCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGATCCCAGTACAACCACTaGAATCAGAAAATTAACAGT +
Preference number: 2 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRSQYNH*NQKINS
Trigger: ACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGA...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR GCA 90 bp TTTACATTTTGGACAAGTCATCCTTTAGGGAGTCAGCAATCATGTCTGCCATTTGTAAGCTTACATAAATaGTCCTTTATGGTTTCGTCA +
Preference number: 2 (lower is better)
Translates to: FTFWTSHPLGSQQSCLPFVSLHK*SFMVSS
Trigger: TGACGAAACCATAAAGGAGCATTTATGTAAGCTTAC...AAATGGCAGACATGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR-3UTR CAA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGACATCCAAGCCTGCTTaGGGACAGCCCAGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMTSKPA*GQPSAS
Trigger: AGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATGT...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR TCA 72 bp CGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTaGGAGGCCCTTGGTGGCCATGGACATCAGGCCACA +
Preference number: 3 (lower is better)
Translates to: RVSPKVEWRSVW*EALGGHGHQAT
Trigger: TGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR TCA 72 bp AATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTaGGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGG +
Preference number: 3 (lower is better)
Translates to: NQAFGGPCLSKG*VEKRMVRGPWW
Trigger: CCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACGTGCCACTGGGCATCTaGTGCAAACACAAGACTCTG +
Preference number: 3 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDVPLGI*CKHKTL
Trigger: CAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCAC...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR CCA 72 bp CACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTaGGAACAGACTAGGAACAAACACGGGTGTGGTCAA +
Preference number: 3 (lower is better)
Translates to: HKPQRACGDAYG*EQTRNKHGCGQ
Trigger: TTGACCACACCCGTGTTTGTTCCTAGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 3 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCGTGTCTCTCCAAAGGTaGAGTGGAGAAGCGTATGGT +
Preference number: 3 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLVSLQR*SGEAYG
Trigger: ACCATACGCTTCTCCACTCAACCTTTGGAGAGACAC...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCACTTACCAATAAGTaGGCAGCAAATCAGAGCCAA +
Preference number: 3 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMALTNK*AANQSQ
Trigger: TTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTGC...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 3 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR GCA 72 bp CTAACTCAGGAGAACTGCTCAAATTGTACCCTCTCTTaGCCAACACAGAGATCAGGCCAGACCAGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: LTQENCSNCTLS*PTQRSGQTRSE
Trigger: TTCTGACCTGGTCTGGCCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATTTGAGCAGTTCTCCTGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TGCCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 3 (lower is better)
Translates to: CHWASCANTRLCVDHCVPMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...GGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
3UTR-3UTR CAA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCACATTAGACGTCACATaGATGATCTCAGCCAAGATC +
Preference number: 3 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLTLDVT*MISAKI
Trigger: GATCTTGGCTGAGATCATCAATGTGACGTCTAATGT...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCAGATGTTGTGTCCAATaGTCATGTCTCTTCAGTCTC +
Preference number: 3 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLRCCVQ*SCLFSL
Trigger: GAGACTGAAGAGACATGACAATTGGACACAACATCT...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGAGGCCAATTTACATTTaGGACAAGTCATCCTTTAGG +
Preference number: 3 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMRPIYI*DKSSFR
Trigger: CCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCT...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR GCA 72 bp TCTCTCCAGCTCTCAAAGTCCCTCTCAAACTGGCCCTaGTTAGCAGTAACATCGCTATTAAATCTTGCTCCC +
Preference number: 3 (lower is better)
Translates to: SLQLSKSLSNWP*LAVTSLLNLAP
Trigger: GGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAGGGACTTTGAGAGCTGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 3 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
3UTR-3UTR CAA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCACATCCAAGCCTGCTTaGGGACAGCCCAGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSTSKPA*GQPSAS
Trigger: AGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATGT...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGACACTATTTGGCTCATaGATGGTCTTTAATGGAGTT +
Preference number: 3 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMTLFGS*MVFNGV
Trigger: AACTCCATTAAAGACCATCAATGAGCCAAATAGTGT...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCGGAGAACTGCTCAAATaGTACCCTCTCTTGCCCAAC +
Preference number: 3 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFGELLK*YPLLPN
Trigger: GTTGGGCAAGAGAGGGTACAATTTGAGCAGTTCTCC...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCTATGGTGAGAGGCCCTaGGTGGCCATGGACATCAGG +
Preference number: 3 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSYGERP*VAMDIR
Trigger: CCTGATGTCCATGGCCACCAAGGGCCTCTCACCATA...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAGTGCCACTGGGCATCTaGTGCAAACACAAGACTCTG +
Preference number: 3 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRVPLGI*CKHKTL
Trigger: CAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCAC...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTCAAGCCACAGAGGGCTaGTGGAGATGCTTATGGCTG +
Preference number: 3 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFQATEG*WRCLWL
Trigger: CAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTG...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR GCA 72 bp AGCAGTAACATCGCTATTAAATCTTGCTCCCTTCTGTaGTACTCTTTCTGTCTGTTGTACCTCTGCACCCAC +
Preference number: 3 (lower is better)
Translates to: SSNIAIKSCSLL*YSFCLLYLCTH
Trigger: GTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR GCA 72 bp CTGGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTaGTCCCTTCTGTGCTACTCTTTCTGTCTGTTGTAC +
Preference number: 3 (lower is better)
Translates to: LALLSSNIAIKS*SLLCYSFCLLY
Trigger: GTACAACAGACAGAAAGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR-3UTR CAA 90 bp TCCTCAGGCCAATTTACATTTTGGACAAGTCATCCTTTAGGGAGTCAGCAATCAATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 3 (lower is better)
Translates to: SSGQFTFWTSHPLGSQQSMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...TGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR-3UTR CAA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACATTAGACGTCACATaGATGATCTCAGCCAAGATC +
Preference number: 3 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFTLDVT*MISAKI
Trigger: GATCTTGGCTGAGATCATCAATGTGACGTCTAATGT...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR GCA 72 bp TCCCTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTaGACCCACCTCCATGCCCTAAATCCAAATTTTATT +
Preference number: 3 (lower is better)
Translates to: SLLCYSFCLLYL*THLHALNPNFI
Trigger: AATAAAATTTGGATTTAGGGCATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR CCA 72 bp GTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTaGGACATACAGGCAGAGCTGCTTCTGGAAAATGGA +
Preference number: 3 (lower is better)
Translates to: VKTFTKTIHVVD*DIQAELLLENG
Trigger: TCCATTTTCCAGAAGCAGCTCTGCCTGTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTGTGTCTCTCCAAAGGTaGAGTGGAGAAGCGTATGGT +
Preference number: 3 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFVSLQR*SGEAYG
Trigger: ACCATACGCTTCTCCACTCAACCTTTGGAGAGACAC...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR TCA 72 bp CAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTaGAATCAGAAAATTAACAGTGGCATCTTACTCCCA +
Preference number: 3 (lower is better)
Translates to: QGHSLTSSQYNH*NQKINSGILLP
Trigger: TGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR TCA 72 bp TCTGCCATTTCCTGGTTAAAATGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAGAGTCGAATGTCTCCT +
Preference number: 3 (lower is better)
Translates to: SAISWLKWVMKA*GMFFSQSRMSP
Trigger: AGGAGACATTCGACTCTGTGAGAAAAACATACCTCATGCTTTCATCACCCATTTTAACCAGGAAATGGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440866.6
3UTR-3UTR CAA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAACATTAGACGTCACATaGATGATCTCAGCCAAGATC +
Preference number: 3 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRTLDVT*MISAKI
Trigger: GATCTTGGCTGAGATCATCAATGTGACGTCTAATGT...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTAGATGTTGTGTCCAATaGTCATGTCTCTTCAGTCTC +
Preference number: 3 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFRCCVQ*SCLFSL
Trigger: GAGACTGAAGAGACATGACAATTGGACACAACATCT...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGACCTCATTCAAGTaGTGCAAATTGTCTCAACAA +
Preference number: 3 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSQTSFK*CKLSQQ
Trigger: TTGTTGAGACAATTTGCACAACTTGAATGAGGTCTG...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAACATTAGACGTCACATaGATGATCTCAGCCAAGATC +
Preference number: 3 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRTLDVT*MISAKI
Trigger: GATCTTGGCTGAGATCATCAATGTGACGTCTAATGT...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTACACTATTTGGCTCATaGATGGTCTTTAATGGAGTT +
Preference number: 3 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFTLFGS*MVFNGV
Trigger: AACTCCATTAAAGACCATCAATGAGCCAAATAGTGT...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCATTCAGAATCAGATGTaGTGTCCAATTGTCATGTCT +
Preference number: 3 (lower is better)
Translates to: STTTEIRKLTVASYSQLIIQNQM*CPIVMS
Trigger: AGACATGACAATTGGACACAACATCTGATTCTGAAT...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR-3UTR CAA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTATTCAGAATCAGATGTaGTGTCCAATTGTCATGTCT +
Preference number: 3 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFIQNQM*CPIVMS
Trigger: AGACATGACAATTGGACACAACATCTGATTCTGAAT...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR GCA 72 bp CATGCTAGAATTCTCACAGATTTAAAGGAGGTAGTTTaGATCTCCATGGTATTACTTCTTCCATTTAGAAAC +
Preference number: 3 (lower is better)
Translates to: HARILTDLKEVV*ISMVLLLPFRN
Trigger: GTTTCTAAATGGAAGAAGTAATACCATGGAGATGCAAACTACCTCCTTTAAATCTGTGAGAATTCTAGCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR GCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGTCCACCTGGAAGGCTaGCCGCTCTCCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDVHLEG*PLSLRV
Trigger: GACCCTCAGGGAGAGCGGGCAGCCTTCCAGGTGGAC...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCGCACGAGACCGGAAGTaGCCCCCTCAGGTGACGTCA +
Preference number: 4 (lower is better)
Translates to: LGGHGHQATQATEGLWRCARDRK*PPQVTS
Trigger: TGACGTCACCTGAGGGGGGCACTTCCGGTCTCGTGC...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGTCCACCTGGAAGGCTaGCCGCTCTCCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYVHLEG*PLSLRV
Trigger: GACCCTCAGGGAGAGCGGGCAGCCTTCCAGGTGGAC...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACGTCCACCTGGAAGGCTaGCCGCTCTCCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDVHLEG*PLSLRV
Trigger: GACCCTCAGGGAGAGCGGGCAGCCTTCCAGGTGGAC...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCACGAGACCGGAAGTaGCCCCCTCAGGTGACGTCA +
Preference number: 4 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMARDRK*PPQVTS
Trigger: TGACGTCACCTGAGGGGGGCACTTCCGGTCTCGTGC...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGTTGCTGGTTGTCCTGTaGCAGGAGGCACAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKLLVVL*QEAQLG
Trigger: CCCCAACTGTGCCTCCTGCCACAGGACAACCAGCAA...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACGGCCCTTGGTGGCCATaGACATCAGGCCACACAAGC +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDGPWWP*TSGHTS
Trigger: GCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCC...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACGTGAGAGGCCCTTGGTaGCCATGGACATCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDVRGPW*PWTSGH
Trigger: GTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCAC...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCATGGTGAGAGGCCCTTaGTGGCCATGGACATCAGGC +
Preference number: 4 (lower is better)
Translates to: LGGHGHQATQATEGLWRCMVRGP*WPWTSG
Trigger: GCCTGATGTCCATGGCCACCAAGGGCCTCTCACCAT...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGATGGTGAGAGGCCCTTaGTGGCCATGGACATCAGGC +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKMVRGP*WPWTSG
Trigger: GCCTGATGTCCATGGCCACCAAGGGCCTCTCACCAT...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGTTGAATCTGTCCACCTaGAAGGCTGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKLNLST*KAARSP
Trigger: GGGAGAGCGGGCAGCCTTCCAGGTGGACAGATTCAA...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619656.4
CDS-3UTR GCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGTGGAGAGGAGGAGCCTaGAGGGAGCTTATAACCTGG +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKWRGGA*RELITW
Trigger: CCAGGTTATAAGCTCCCTGCAGGCTCCTCCTCTCCA...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGCCATTTCTGTCCACCTaGAAGGCTGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMPFLST*KAARSP
Trigger: GGGAGAGCGGGCAGCCTTCCAGGTGGACAGAAATGG...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR CCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATCCATTTCTGTCCACCTaGAAGGCTGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYPFLST*KAARSP
Trigger: GGGAGAGCGGGCAGCCTTCCAGGTGGACAGAAATGG...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR CCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCCACAGAGGGCTTGTaGAGATGCTTATGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDATEGL*RCLWLG
Trigger: TCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGC...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGTGAGAGGCCCTTGGTaGCCATGGACATCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYVRGPW*PWTSGH
Trigger: GTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCAC...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGGGGGGCTTTAGGATTTaGGCGGAGGGACATCTCATT +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKGGFRI*AEGHLI
Trigger: AATGAGATGTCCCTCCGCTCAAATCCTAAAGCCCCC...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGACAGTAAACAGACATaGTGCCCCTCACCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDDSKQT*CPSPPD
Trigger: ATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTC...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACCCATTTCTGTCCACCTaGAAGGCTGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHPFLST*KAARSP
Trigger: GGGAGAGCGGGCAGCCTTCCAGGTGGACAGAAATGG...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR CCA 90 bp TCCCTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCCATGCCCCATTTCTGTCCACCTaGAAGGCTGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SLLCYSFCLLYLCTHLHAPFLST*KAARSP
Trigger: GGGAGAGCGGGCAGCCTTCCAGGTGGACAGAAATGG...GGCATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGTCCATGTACTGGCAGTaGGGGCTTGTTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMSMYWQ*GLVPQA
Trigger: GGCCTGAGGAACAAGCCCCCACTGCCAGTACATGGA...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATTCCATGTACTGGCAGTaGGGGCTTGTTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYSMYWQ*GLVPQA
Trigger: GGCCTGAGGAACAAGCCCCCACTGCCAGTACATGGA...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGTTGCTGGTTGTCCTGTaGCAGGAGGCACAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQLLVVL*QEAQLG
Trigger: CCCCAACTGTGCCTCCTGCCACAGGACAACCAGCAA...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGCATCCAAGCCTGCTTTaGGACAGCCCAGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQHPSLL*DSPVPL
Trigger: GAGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATG...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGCATCCAAGCCTGCTTTaGGACAGCCCAGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMHPSLL*DSPVPL
Trigger: GAGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATG...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCGGCCCTTGGTGGCCATaGACATCAGGCCACACAAGC +
Preference number: 4 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLGPWWP*TSGHTS
Trigger: GCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCC...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
3UTR CAA 72 bp CAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTaGGTGGCCATGGACATCAGGCCACACAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: QRLSGEAYGERP*VAMDIRPHKPQ
Trigger: CTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGAACGCATGCCCAGCATaGCTGATAGTCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKNACPA*LIVQTG
Trigger: TCCAGTTTGGACTATCAGTCATGCTGGGCATGCGTT...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR TCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACGGGGGCTTTAGGATTTaGGCGGAGGGACATCTCATT +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDGGFRI*AEGHLI
Trigger: AATGAGATGTCCCTCCGCTCAAATCCTAAAGCCCCC...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATTCAAAGCTCAATCGCTaGGCACTCGGTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDSKLNR*ALGNSA
Trigger: TGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGA...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGTCAAAGCTCAATCGCTaGGCACTCGGTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKSKLNR*ALGNSA
Trigger: TGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGA...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACTGGAGAAGCGTATGGTaGGAGGCCCTTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDWRSVW*EALGGH
Trigger: ATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCA...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGTGTCTCTCCAAAGGTTaGGTGGAGAAGCGTATGGTG +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKCLSKG*VEKRMV
Trigger: CACCATACGCTTCTCCACTCAACCTTTGGAGAGACA...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGGTGGAGTGGCAATTCTaGCATTGGGTGACTCAGACA +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKVEWQF*HWVTQT
Trigger: TGTCTGAGTCACCCAATGGCAGAATTGCCACTCCAC...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGCTCATCCTCCCAAGGTaGTGGGATCACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMLILPR*WDHRCE
Trigger: CTCACACCTGTGATCCCAGCACCTTGGGAGGATGAG...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCCCACATTTTAGAACCTaGGTTTCGGCTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: LGGHGHQATQATEGLWRCPHFRT*VSAPPH
Trigger: GTGTGGTGGAGCCGAAACCCAGGTTCTAAAATGTGG...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR CCA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNTASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGGGAGCAACTGTACGTTaGCACATCCAAGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKGATVR*HIQACF
Trigger: AAAGCAGGCTTGGATGTGCCAACGTACAGTTGCTCC...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TGCCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCGGTTACCTGTCCACCTaGAAGGCTGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CHWASCANTRLCVDHCVPGYLST*KAARSP
Trigger: GGGAGAGCGGGCAGCCTTCCAGGTGGACAGGTAACC...GGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541941.5
CDS-3UTR GCA 90 bp TCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGAGGGCTTGTGGAGATaGTTATGGCTGGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: SVSLQRLSGEAYGERPLVEGLWR*LWLGTD
Trigger: GTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTC...CACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGTGGCGAGCGGAGAGTTaGTTTGTAAGACAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKWRAES*FVRQRF
Trigger: GAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCA...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACGCCACAGAGGGCTTGTaGAGATGCTTATGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDATEGL*RCLWLG
Trigger: TCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGC...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACGCCACAGAGGGCTTGTaGAGATGCTTATGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHATEGL*RCLWLG
Trigger: TCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGC...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGGGCCCTTGGTGGCCATaGACATCAGGCCACACAAGC +
Preference number: 4 (lower is better)
Translates to: EKSSLWWSVSLQRLSGEAGPWWP*TSGHTS
Trigger: GCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCC...CGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATAAATCAAGCCTTTGGTaGTCCGTGTCTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDKSSLW*SVSLQR
Trigger: CCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCGGGGGCTTTAGGATTTaGGCGGAGGGACATCTCATT +
Preference number: 4 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLGGFRI*AEGHLI
Trigger: AATGAGATGTCCCTCCGCTCAAATCCTAAAGCCCCC...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACGGGGGCTTTAGGATTTaGGCGGAGGGACATCTCATT +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHGGFRI*AEGHLI
Trigger: AATGAGATGTCCCTCCGCTCAAATCCTAAAGCCCCC...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGTCAAAGCTCAATCGCTaGGCACTCGGTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMSKLNR*ALGNSA
Trigger: TGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGA...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AAGTCCCTCTCAAACTGGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTGTCCACCTGGAAGGCTaGCCGCTCTCCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: KSLSNWPCLAVTSLLNLAVHLEG*PLSLRV
Trigger: GACCCTCAGGGAGAGCGGGCAGCCTTCCAGGTGGAC...AGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAGGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR GCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGTGGAGTGGCAATTCTaGCATTGGGTGACTCAGACA +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYVEWQF*HWVTQT
Trigger: TGTCTGAGTCACCCAATGGCAGAATTGCCACTCCAC...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCTCATCCTCCCAAGGTaGTGGGATCACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLLILPR*WDHRCE
Trigger: CTCACACCTGTGATCCCAGCACCTTGGGAGGATGAG...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGCTCATCCTCCCAAGGTaGTGGGATCACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQLILPR*WDHRCE
Trigger: CTCACACCTGTGATCCCAGCACCTTGGGAGGATGAG...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CCTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCCATGCCCTTGTCTGTTGTACCTCTaGACCCACCTCCATGCCCTA +
Preference number: 4 (lower is better)
Translates to: PSVLLFLSVVPLHPPPCPCLLYL*THLHAL
Trigger: TAGGGCATGGAGGTGGGTGCAGAGGTACAACAGACA...AGGGCATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGGAATCTTCTTGTCTTTaGGAGCCAACGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQESSCL*EPTHAQ
Trigger: CTGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTC...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGAATCTTCTTGTCTTTaGGAGCCAACGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYESSCL*EPTHAQ
Trigger: CTGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTC...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATTGGCAATTCTGCCATTaGGTGACTCAGACATTCGTT +
Preference number: 4 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDWQFCH*VTQTFV
Trigger: AACGAATGTCTGAGTCACCCAATGGCAGAATTGCCA...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACAGCACAAAAGTGGAGTaGCAATTCTGCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDSTKVE*QFCHWV
Trigger: CACCCAATGGCAGAATTGCCACTCCACTTTTGTGCT...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGATCCATGTGGTTGACTaGGACATACAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SVSLQRLSGEAYGERPLVIHVVD*DIQAEL
Trigger: CAGCTCTGCCTGTATGTCCCAGTCAACCACATGGAT...CACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGATCCATGTGGTTGACTaGGACATACAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQIHVVD*DIQAEL
Trigger: CAGCTCTGCCTGTATGTCCCAGTCAACCACATGGAT...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGAATTCTGCCATTGGGTaGCTCAGACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKNSAIG*LRHSFN
Trigger: ATTGAACGAATGTCTGAGTCACCCAATGGCAGAATT...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCAATTCTGCCATTGGGTaGCTCAGACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LGGHGHQATQATEGLWRCNSAIG*LRHSFN
Trigger: ATTGAACGAATGTCTGAGTCACCCAATGGCAGAATT...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGGGGGGCTTTAGGATTTaGGCGGAGGGACATCTCATT +
Preference number: 4 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQGGFRI*AEGHLI
Trigger: AATGAGATGTCCCTCCGCTCAAATCCTAAAGCCCCC...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCAGAAGTCACTTGCTGTaGTGTAGAAGCTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: LGGHGHQATQATEGLWRCRSHLL*CRSYAK
Trigger: TTTGGCATAGCTTCTACATCACAGCAAGTGACTTCT...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTAAAAGAGAGACTTTaGGCCGAGTCTAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: LGGHGHQATQATEGLWRCLKERL*AESNSG
Trigger: TCCTGAGTTAGACTCGGCTCAAAGTCTCTCTTTTAA...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCTCAAAGCTCAATCGCTaGGCACTCGGTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLSKLNR*ALGNSA
Trigger: TGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGA...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATTGGAGAAGCGTATGGTaGGAGGCCCTTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYWRSVW*EALGGH
Trigger: ATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCA...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACTGTCTCTCCAAAGGTTaGGTGGAGAAGCGTATGGTG +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDCLSKG*VEKRMV
Trigger: CACCATACGCTTCTCCACTCAACCTTTGGAGAGACA...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTGTCTCTCCAAAGGTTaGGTGGAGAAGCGTATGGTG +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHCLSKG*VEKRMV
Trigger: CACCATACGCTTCTCCACTCAACCTTTGGAGAGACA...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTGACAGTAAACAGACATaGTGCCCCTCACCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTDSKQT*CPSPPD
Trigger: ATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTC...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGTCCACCTGGAAGGCTaGCCGCTCTCCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWVHLEG*PLSLRV
Trigger: GACCCTCAGGGAGAGCGGGCAGCCTTCCAGGTGGAC...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATCCACTGGGCATCTTGTaGAAACACAAGACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYPLGIL*KHKTLC
Trigger: ACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTGGAGAGGAGGAGCCTaGAGGGAGCTTATAACCTGG +
Preference number: 4 (lower is better)
Translates to: EKSSLWWSVSLQRLSGEAWRGGA*RELITW
Trigger: CCAGGTTATAAGCTCCCTGCAGGCTCCTCCTCTCCA...CGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACCTGTGTACAGCCCTGTaGTTACGGCCTATGTATCTA +
Preference number: 4 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNLCTAL*LRPMYL
Trigger: TAGATACATAGGCCGTAAGCACAGGGCTGTACACAG...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKTYRQS*FWKMDF
Trigger: GAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGT...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGGAGGGCTTGTGGAGATaGTTATGGCTGGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLEGLWR*LWLGTD
Trigger: GTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTC...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACCCACATTTTAGAACCTaGGTTTCGGCTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHPHFRT*VSAPPH
Trigger: GTGTGGTGGAGCCGAAACCCAGGTTCTAAAATGTGG...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR CCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACGAATCTTCTTGTCTTTaGGAGCCAACGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHESSCL*EPTHAQ
Trigger: CTGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTC...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp TCCCTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCCATGCCGAATCTTCTTGTCTTTaGGAGCCAACGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLLCYSFCLLYLCTHLHAESSCL*EPTHAQ
Trigger: CTGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTC...GGCATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACTGGCAATTCTGCCATTaGGTGACTCAGACATTCGTT +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDWQFCH*VTQTFV
Trigger: AACGAATGTCTGAGTCACCCAATGGCAGAATTGCCA...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGAGCACAAAAGTGGAGTaGCAATTCTGCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMSTKVE*QFCHWV
Trigger: CACCCAATGGCAGAATTGCCACTCCACTTTTGTGCT...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGAGCACAAAAGTGGAGTaGCAATTCTGCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQSTKVE*QFCHWV
Trigger: CACCCAATGGCAGAATTGCCACTCCACTTTTGTGCT...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATAGCACAAAAGTGGAGTaGCAATTCTGCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYSTKVE*QFCHWV
Trigger: CACCCAATGGCAGAATTGCCACTCCACTTTTGTGCT...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGCAAAGACCATCCATGTaGTTGACTGGGACATACAGG +
Preference number: 4 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQQRPSM*LTGTYR
Trigger: CCTGTATGTCCCAGTCAACCACATGGATGGTCTTTG...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGTGAGAGGCCCTTGGTaGCCATGGACATCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGEVRGPW*PWTSGH
Trigger: GTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCAC...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTGTGAGAGGCCCTTGGTaGCCATGGACATCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLVRGPW*PWTSGH
Trigger: GTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCAC...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGATGTCCTTTGGCACATaGGTTCTCAGGAAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQMSFGT*VLRKAS
Trigger: ACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACAT...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACATGTCCTTTGGCACATaGGTTCTCAGGAAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNMSFGT*VLRKAS
Trigger: ACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACAT...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGATGTCCTTTGGCACATaGGTTCTCAGGAAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: SVSLQRLSGEAYGERPLVMSFGT*VLRKAS
Trigger: ACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACAT...CACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTGAAATAGCTGCCTATTaGATGGCCAATGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTEIAAY*MANEHK
Trigger: CTTGTGCTCATTGGCCATTCAATAGGCAGCTATTTC...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATTCTAGGTTCATTACTTaGAGGCCCCTTCTGATTAGC +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYSRFIT*RPLLIS
Trigger: GCTAATCAGAAGGGGCCTTCAAGTAATGAACCTAGA...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTTCAAAGCTCAATCGCTaGGCACTCGGTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTSKLNR*ALGNSA
Trigger: TGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGA...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTTGTCTCTCCAAAGGTTaGGTGGAGAAGCGTATGGTG +
Preference number: 4 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTCLSKG*VEKRMV
Trigger: CACCATACGCTTCTCCACTCAACCTTTGGAGAGACA...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGGACAGTAAACAGACATaGTGCCCCTCACCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLDSKQT*CPSPPD
Trigger: ATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTC...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACCCACTGGGCATCTTGTaGAAACACAAGACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHPLGIL*KHKTLC
Trigger: ACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACCCACTGGGCATCTTGTaGAAACACAAGACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDPLGIL*KHKTLC
Trigger: ACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGCACGAGACCGGAAGTaGCCCCCTCAGGTGACGTCA +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWARDRK*PPQVTS
Trigger: TGACGTCACCTGAGGGGGGCACTTCCGGTCTCGTGC...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCCATTTCTGTCCACCTaGAAGGCTGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTIPFLST*KAARSP
Trigger: GGGAGAGCGGGCAGCCTTCCAGGTGGACAGAAATGG...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR CCA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCCACATTTTAGAACCTaGGTTTCGGCTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTPHFRT*VSAPPH
Trigger: GTGTGGTGGAGCCGAAACCCAGGTTCTAAAATGTGG...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR CCA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCACTGATAGTCCAAACTaGAAAGCGTCTGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LGGHGHQATQATEGLWRCTDSPN*KASVCQ
Trigger: TTGACAAACAGACGCTTTCCAGTTTGGACTATCAGT...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACCATTCGTTCAATTGTTaGAAAGAGCAGAAAGGCACG +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDHSFNC*KEQKGT
Trigger: CGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATG...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATTGGCAATTCTGCCATTaGGTGACTCAGACATTCGTT +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYWQFCH*VTQTFV
Trigger: AACGAATGTCTGAGTCACCCAATGGCAGAATTGCCA...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCTGGCGAGCGGAGAGTTaGTTTGTAAGACAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLWRAES*FVRQRF
Trigger: GAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCA...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTCATCCAAGCCTGCTTTaGGACAGCCCAGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SAYNMASGELVCKTKVLTHPSLL*DSPVPL
Trigger: GAGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATG...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCCAAAGACCATCCATGTaGTTGACTGGGACATACAGG +
Preference number: 4 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLQRPSM*LTGTYR
Trigger: CCTGTATGTCCCAGTCAACCACATGGATGGTCTTTG...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTGCCACAGAGGGCTTGTaGAGATGCTTATGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSATEGL*RCLWLG
Trigger: TCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGC...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCGGCCCTTGGTGGCCATaGACATCAGGCCACACAAGC +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTIGPWWP*TSGHTS
Trigger: GCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCC...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCATGGTGAGAGGCCCTTaGTGGCCATGGACATCAGGC +
Preference number: 4 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFMVRGP*WPWTSG
Trigger: GCCTGATGTCCATGGCCACCAAGGGCCTCTCACCAT...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTATGGTGAGAGGCCCTTaGTGGCCATGGACATCAGGC +
Preference number: 4 (lower is better)
Translates to: SAYNMASGELVCKTKVLTMVRGP*WPWTSG
Trigger: GCCTGATGTCCATGGCCACCAAGGGCCTCTCACCAT...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATATGTCCTTAATTTCTTaGGCGTTTGAATCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDMSLIS*AFESSD
Trigger: ATCAGAGGATTCAAACGCTCAAGAAATTAAGGACAT...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR TCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTCTATTGAATGGCCAATaGGCACAAGTTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTLLNGQ*AQVSCP
Trigger: AGGACATGAAACTTGTGCTCATTGGCCATTCAATAG...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCGAAATAGCTGCCTATTaGATGGCCAATGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLEIAAY*MANEHK
Trigger: CTTGTGCTCATTGGCCATTCAATAGGCAGCTATTTC...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTAATTCTGCCATTGGGTaGCTCAGACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTNSAIG*LRHSFN
Trigger: ATTGAACGAATGTCTGAGTCACCCAATGGCAGAATT...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACTCTAGGTTCATTACTTaGAGGCCCCTTCTGATTAGC +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDSRFIT*RPLLIS
Trigger: GCTAATCAGAAGGGGCCTTCAAGTAATGAACCTAGA...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TGCCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCCTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 4 (lower is better)
Translates to: CHWASCANTRLCVDHCVPLSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...GGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCTGGAGAAGCGTATGGTaGGAGGCCCTTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTIWRSVW*EALGGH
Trigger: ATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCA...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGACAGTAAACAGACATaGTGCCCCTCACCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYDSKQT*CPSPPD
Trigger: ATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTC...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTGGAGAGGAGGAGCCTaGAGGGAGCTTATAACCTGG +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLWRGGA*RELITW
Trigger: CCAGGTTATAAGCTCCCTGCAGGCTCCTCCTCTCCA...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTGGAGAGGAGGAGCCTaGAGGGAGCTTATAACCTGG +
Preference number: 4 (lower is better)
Translates to: SAYNMASGELVCKTKVLTWRGGA*RELITW
Trigger: CCAGGTTATAAGCTCCCTGCAGGCTCCTCCTCTCCA...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQTYRQS*FWKMDF
Trigger: GAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGT...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCTGTGCTACTCTTAGTCCCAAGAGGGCTTaGCTCCTGTGTCCACCACGA +
Preference number: 4 (lower is better)
Translates to: PCLAVTSLLNLAPFCATLSPKRA*LLCPPR
Trigger: TCGTGGTGGACACAGGAGGCAAGCCCTCTTGGGACT...AAGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR GCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAGCACGAGACCGGAAGTaGCCCCCTCAGGTGACGTCA +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRARDRK*PPQVTS
Trigger: TGACGTCACCTGAGGGGGGCACTTCCGGTCTCGTGC...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCCATGCCCTAAACCACATTTTAGAACCTaGGTTTCGGCTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: SVLLFLSVVPLHPPPCPKPHFRT*VSAPPH
Trigger: GTGTGGTGGAGCCGAAACCCAGGTTCTAAAATGTGG...TTTAGGGCATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTCATTCGTTCAATTGTTaGAAAGAGCAGAAAGGCACG +
Preference number: 4 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTHSFNC*KEQKGT
Trigger: CGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATG...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGCATTCGTTCAATTGTTaGAAAGAGCAGAAAGGCACG +
Preference number: 4 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMHSFNC*KEQKGT
Trigger: CGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATG...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGAGCACAAAAGTGGAGTaGCAATTCTGCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQSTKVE*QFCHWV
Trigger: CACCCAATGGCAGAATTGCCACTCCACTTTTGTGCT...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGAAACCAGCACAAAAGTaGAGTGGCAATTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMKPAQK*SGNSAI
Trigger: AATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTT...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATAAACCAGCACAAAAGTaGAGTGGCAATTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYKPAQK*SGNSAI
Trigger: AATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTT...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLTASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp GGAGTCAGCAATCATGTCTGCCATTTCCTGGTTAAAATGGGTGATGAAAGCATGCATCCAAGCCTGCTTTaGGACAGCCCAGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GVSNHVCHFLVKMGDESMHPSLL*DSPVPL
Trigger: GAGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATG...CATGCTTTCATCACCCATTTTAACCAGGAAATGGCAGACATGATTGCTGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440866.6
CDS-3UTR CCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACCACTTACCAATAAGTTaGCAGCAAATCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDHLPIS*QQIRAK
Trigger: TTTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTG...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGATCCATGTGGTTGACTaGGACATACAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLIHVVD*DIQAEL
Trigger: CAGCTCTGCCTGTATGTCCCAGTCAACCACATGGAT...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCGGCCCTTGGTGGCCATaGACATCAGGCCACACAAGC +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFGPWWP*TSGHTS
Trigger: GCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCC...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCGTGAGAGGCCCTTGGTaGCCATGGACATCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFVRGPW*PWTSGH
Trigger: GTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCAC...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGAAATCAAGCCTTTGGTaGTCCGTGTCTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQKSSLW*SVSLQR
Trigger: CCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTAAAGGCAGAAAAACCTaGGTTACCTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTKGRKT*VTCPPG
Trigger: TCCAGGTGGACAGGTAACCCAGGTTTTTCTGCCTTT...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403006.6
ENST00000541941.5
3UTR CAA 72 bp TCTAACTCAGGAGAACTGCTCAAATTGTACCCTCTCTaGCCCAACACAGAGATCAGGCCAGACCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SNSGELLKLYPL*PNTEIRPDQVR
Trigger: TCTGACCTGGTCTGGCCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATTTGAGCAGTTCTCCTGAGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATGTCCTTAATTTCTTaGGCGTTTGAATCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDMSLIS*AFESSD
Trigger: ATCAGAGGATTCAAACGCTCAAGAAATTAAGGACAT...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR TCA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGATGTCCTTTGGCACATaGGTTCTCAGGAAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQMSFGT*VLRKAS
Trigger: ACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACAT...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCCTATTGAATGGCCAATaGGCACAAGTTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLLLNGQ*AQVSCP
Trigger: AGGACATGAAACTTGTGCTCATTGGCCATTCAATAG...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACCTATTGAATGGCCAATaGGCACAAGTTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHLLNGQ*AQVSCP
Trigger: AGGACATGAAACTTGTGCTCATTGGCCATTCAATAG...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACTGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDWVMKA*GMFFSQ
Trigger: CTGTGAGAAAAACATACCTCATGCTTTCATCACCCA...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTCTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 4 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSLSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTGGGGGCTTTAGGATTTaGGCGGAGGGACATCTCATT +
Preference number: 4 (lower is better)
Translates to: SAYNMASGELVCKTKVLTGGFRI*AEGHLI
Trigger: AATGAGATGTCCCTCCGCTCAAATCCTAAAGCCCCC...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACAGAAGTCACTTGCTGTaGTGTAGAAGCTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDRSHLL*CRSYAK
Trigger: TTTGGCATAGCTTCTACATCACAGCAAGTGACTTCT...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACTTAAAAGAGAGACTTTaGGCCGAGTCTAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDLKERL*AESNSG
Trigger: TCCTGAGTTAGACTCGGCTCAAAGTCTCTCTTTTAA...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCTTAAAAGAGAGACTTTaGGCCGAGTCTAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLLKERL*AESNSG
Trigger: TCCTGAGTTAGACTCGGCTCAAAGTCTCTCTTTTAA...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACTGGAGAAGCGTATGGTaGGAGGCCCTTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYWRSVW*EALGGH
Trigger: ATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCA...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCTGGAGAAGCGTATGGTaGGAGGCCCTTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFWRSVW*EALGGH
Trigger: ATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCA...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCTGGAGAGGAGGAGCCTaGAGGGAGCTTATAACCTGG +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTWRGGA*RELITW
Trigger: CCAGGTTATAAGCTCCCTGCAGGCTCCTCCTCTCCA...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCGAGGGCTTGTGGAGATaGTTATGGCTGGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFEGLWR*LWLGTD
Trigger: GTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTC...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGAGGGCTTGTGGAGATaGTTATGGCTGGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGEEGLWR*LWLGTD
Trigger: GTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTC...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCCTCATCCTCCCAAGGTaGTGGGATCACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTLILPR*WDHRCE
Trigger: CTCACACCTGTGATCCCAGCACCTTGGGAGGATGAG...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGAAGTTTCATGTCCTTTaGCACATGAGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQKFHVL*HMSSQE
Trigger: TTCCTGAGAACTCATGTGCCAAAGGACATGAAACTT...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGAAGTTTCATGTCCTTTaGCACATGAGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SVSLQRLSGEAYGERPLVKFHVL*HMSSQE
Trigger: TTCCTGAGAACTCATGTGCCAAAGGACATGAAACTT...CACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGTTCATAGTACTCTTTTaGACACCAAGGATCTATAGT +
Preference number: 4 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKFIVLF*TPRIYS
Trigger: ACTATAGATCCTTGGTGTCCAAAAGAGTACTATGAA...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATTTCATAGTACTCTTTTaGACACCAAGGATCTATAGT +
Preference number: 4 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDFIVLF*TPRIYS
Trigger: ACTATAGATCCTTGGTGTCCAAAAGAGTACTATGAA...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHTASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWTASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp TGCCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: CHWASCANTRLCVDHCVPLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...GGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACTTGCTGGTTGTCCTGTaGCAGGAGGCACAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYLLVVL*QEAQLG
Trigger: CCCCAACTGTGCCTCCTGCCACAGGACAACCAGCAA...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGCATCCAAGCCTGCTTTaGGACAGCCCAGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWHPSLL*DSPVPL
Trigger: GAGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATG...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTGAACTCCATCCTCAATaGCTAGCACACTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTELHPQ*LAHYLA
Trigger: AGCCAAATAGTGTGCTAGCCATTGAGGATGGAGTTC...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGCACTTACCAATAAGTTaGCAGCAAATCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMHLPIS*QQIRAK
Trigger: TTTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTG...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCGGCCCTTGGTGGCCATaGACATCAGGCCACACAAGC +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSGPWWP*TSGHTS
Trigger: GCTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCC...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGATGGTGAGAGGCCCTTaGTGGCCATGGACATCAGGC +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWMVRGP*WPWTSG
Trigger: GCCTGATGTCCATGGCCACCAAGGGCCTCTCACCAT...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGAGGGATTTCCTATTTTaGACAAGTCATCCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: SVSLQRLSGEAYGERPLVRDFLF*TSHPLG
Trigger: CCCTAAAGGATGACTTGTCCAAAATAGGAAATCCCT...CACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
CDS-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCGGTTACCTGTCCACCTaGAAGGCTGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIGYLST*KAARSP
Trigger: GGGAGAGCGGGCAGCCTTCCAGGTGGACAGGTAACC...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403006.6
ENST00000541941.5
CDS-3UTR CCA 90 bp GCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCTGTGCTACTCTAGAAACCTTCCAGCATaGAGTCCTGGCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALLSSNIAIKSCSLLCYSRNLPA*SPGSLS
Trigger: GGAGAGAGAGCCAGGACTCCATGCTGGAAGGTTTCT...AGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
3UTR CAA 72 bp GGCAGTGGGGGCTTGTTCCTCAGGCCAATTTACATTTaGGACAAGTCATCCTTTAGGGAGTCAGCAATCATG +
Preference number: 4 (lower is better)
Translates to: GSGGLFLRPIYI*DKSSFRESAIM
Trigger: CATGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCTGAGGAACAAGCCCCCACTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440866.6
CDS-3UTR TCA 90 bp CCTCTCAAACTGGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTAACGCATGCCCAGCATaGCTGATAGTCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: PLKLALLSSNIAIKSCSLNACPA*LIVQTG
Trigger: TCCAGTTTGGACTATCAGTCATGCTGGGCATGCGTT...AAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR TCA 90 bp TGCCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCATGTCCTTTGGCACATaGGTTCTCAGGAAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: CHWASCANTRLCVDHCVPMSFGT*VLRKAS
Trigger: ACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACAT...GGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCTATTGAATGGCCAATaGGCACAAGTTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLLLNGQ*AQVSCP
Trigger: AGGACATGAAACTTGTGCTCATTGGCCATTCAATAG...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTCTAGGTTCATTACTTaGAGGCCCCTTCTGATTAGC +
Preference number: 4 (lower is better)
Translates to: EKSSLWWSVSLQRLSGEASRFIT*RPLLIS
Trigger: GCTAATCAGAAGGGGCCTTCAAGTAATGAACCTAGA...CGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTTGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTWVMKA*GMFFSQ
Trigger: CTGTGAGAAAAACATACCTCATGCTTTCATCACCCA...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAATCAAAGCTCAATCGCTaGGCACTCGGTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGESKLNR*ALGNSA
Trigger: TGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGA...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGATGGAGAAGCGTATGGTaGGAGGCCCTTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRWRSVW*EALGGH
Trigger: ATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCA...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCGACAGTAAACAGACATaGTGCCCCTCACCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTIDSKQT*CPSPPD
Trigger: ATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTC...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TCCCTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCCATGCCAAGAATGCCACCCTCTaGTGTTGTAAGAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLLCYSFCLLYLCTHLHAKNATL*CCKNLL
Trigger: AAGAAGATTCTTACAACATCAGAGGGTGGCATTCTT...GGCATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR GCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCGTGGAGTGGCAATTCTaGCATTGGGTGACTCAGACA +
Preference number: 4 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFVEWQF*HWVTQT
Trigger: TGTCTGAGTCACCCAATGGCAGAATTGCCACTCCAC...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTCTGTGTACAGCCCTGTaGTTACGGCCTATGTATCTA +
Preference number: 4 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSLCTAL*LRPMYL
Trigger: TAGATACATAGGCCGTAAGCACAGGGCTGTACACAG...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQTYRQS*FWKMDF
Trigger: GAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGT...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGGAGGGCTTGTGGAGATaGTTATGGCTGGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWEGLWR*LWLGTD
Trigger: GTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTC...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACCTCATCCTCCCAAGGTaGTGGGATCACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYLILPR*WDHRCE
Trigger: CTCACACCTGTGATCCCAGCACCTTGGGAGGATGAG...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACACCTCATTCAAGTTGTaGAAATTGTCTCAACAATGT +
Preference number: 4 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDTSFKL*KLSQQC
Trigger: ACATTGTTGAGACAATTTGCACAACTTGAATGAGGT...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCCATGCCCTACTGCACCCACCTCCATaGCCTAAATCCAAATTTTAT +
Preference number: 4 (lower is better)
Translates to: LLCYSFCLLYLCTHLHALLHPPP*PKSKFY
Trigger: ATAAAATTTGGATTTAGGGCATGGAGGTGGGTGCAG...TAGGGCATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp CTCCCTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCCATGCACTGATAGTCCAAACTaGAAAGCGTCTGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LPSVLLFLSVVPLHPPPCTDSPN*KASVCQ
Trigger: TTGACAAACAGACGCTTTCCAGTTTGGACTATCAGT...GCATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTATGTCTGCCATTTCCTaGTTAAAATGGGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTMSAIS*LKWVMK
Trigger: TTTCATCACCCATTTTAACCAGGAAATGGCAGACAT...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGATTGCTGGTTGTCCTGTaGCAGGAGGCACAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRLLVVL*QEAQLG
Trigger: CCCCAACTGTGCCTCCTGCCACAGGACAACCAGCAA...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAAGGGAGCTTATAACCTaGGAGGCTAAGGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGERELIT*EAKAQH
Trigger: ATGCTGAGCCTTAGCCTCCCAGGTTATAAGCTCCCT...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTGGAGCAACTGTACGTTaGCACATCCAAGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SAYNMASGELVCKTKVLTGATVR*HIQACF
Trigger: AAAGCAGGCTTGGATGTGCCAACGTACAGTTGCTCC...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGGAACTCCATCCTCAATaGCTAGCACACTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLELHPQ*LAHYLA
Trigger: AGCCAAATAGTGTGCTAGCCATTGAGGATGGAGTTC...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAGCCACAGAGGGCTTGTaGAGATGCTTATGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSATEGL*RCLWLG
Trigger: TCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGC...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCGTGAGAGGCCCTTGGTaGCCATGGACATCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIVRGPW*PWTSGH
Trigger: GTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCAC...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCAACGCATGCCCAGCATaGCTGATAGTCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTNACPA*LIVQTG
Trigger: TCCAGTTTGGACTATCAGTCATGCTGGGCATGCGTT...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR TCA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTGAAATAGCTGCCTATTaGATGGCCAATGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSEIAAY*MANEHK
Trigger: CTTGTGCTCATTGGCCATTCAATAGGCAGCTATTTC...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAATTCTGCCATTGGGTaGCTCAGACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLNSAIG*LRHSFN
Trigger: ATTGAACGAATGTCTGAGTCACCCAATGGCAGAATT...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCCTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTLSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTGTCTCTCCAAAGGTTaGGTGGAGAAGCGTATGGTG +
Preference number: 4 (lower is better)
Translates to: PITWRAESWFVRQRFSLSCLSKG*VEKRMV
Trigger: CACCATACGCTTCTCCACTCAACCTTTGGAGAGACA...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCCCAGTACAACCACTaGAATCAGAAAATTAACAGT +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHSQYNH*NQKINS
Trigger: ACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGA...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACTCCCAGTACAACCACTaGAATCAGAAAATTAACAGT +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDSQYNH*NQKINS
Trigger: ACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGA...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGTAAGCTTACATAAATaGTCCTTTATGGTTTCGTCA +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYVSLHK*SFMVSS
Trigger: TGACGAAACCATAAAGGAGCATTTATGTAAGCTTAC...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTAATTGTACCCTCTCTTaGCCAACACAGAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: SAYNMASGELVCKTKVLTNCTLS*PTQRSG
Trigger: GCCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATT...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAGAGGGCTTGTGGAGATaGTTATGGCTGGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSEGLWR*LWLGTD
Trigger: GTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTC...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCGAGGGCTTGTGGAGATaGTTATGGCTGGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFEGLWR*LWLGTD
Trigger: GTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTC...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCTCATCCTCCCAAGGTaGTGGGATCACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSLILPR*WDHRCE
Trigger: CTCACACCTGTGATCCCAGCACCTTGGGAGGATGAG...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGACTCATCCTCCCAAGGTaGTGGGATCACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRLILPR*WDHRCE
Trigger: CTCACACCTGTGATCCCAGCACCTTGGGAGGATGAG...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTACCTCATTCAAGTTGTaGAAATTGTCTCAACAATGT +
Preference number: 4 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTTSFKL*KLSQQC
Trigger: ACATTGTTGAGACAATTTGCACAACTTGAATGAGGT...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CTGGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCTGTGCTACTCTTGCTCCCTTCTGTaGTACTCTTTCTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LALLSSNIAIKSCSLLCYSCSLL*YSFCLL
Trigger: CAACAGACAGAAAGAGTAGCACAGAAGGGAGCAAGA...GTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp GCTCCCTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCCATGAAAGGCAGAAAAACCTaGGTTACCAGGAATAATGAA +
Preference number: 4 (lower is better)
Translates to: APFCATLSVCCTSAPTSMKGRKT*VTRNNE
Trigger: TTCATTATTCCTGGTAACCCAGGTTTTTCTGCCTTT...CATGGAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGACTGATAGTCCAAACTaGAAAGCGTCTGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLTDSPN*KASVCQ
Trigger: TTGACAAACAGACGCTTTCCAGTTTGGACTATCAGT...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCGAATCTTCTTGTCTTTaGGAGCCAACGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTESSCL*EPTHAQ
Trigger: CTGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTC...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATTGGCAATTCTGCCATTaGGTGACTCAGACATTCGTT +
Preference number: 4 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYWQFCH*VTQTFV
Trigger: AACGAATGTCTGAGTCACCCAATGGCAGAATTGCCA...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGATAAATGCTCCTTTATaGTTTCGTCATCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SVSLQRLSGEAYGERPLVINAPL*FRHLSS
Trigger: TGAAGAGAGATGACGAAACCATAAAGGAGCATTTAT...CACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATATAAATGCTCCTTTATaGTTTCGTCATCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYINAPL*FRHLSS
Trigger: TGAAGAGAGATGACGAAACCATAAAGGAGCATTTAT...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACATAAATGCTCCTTTATaGTTTCGTCATCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNINAPL*FRHLSS
Trigger: TGAAGAGAGATGACGAAACCATAAAGGAGCATTTAT...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCGAATGTCTCCTTCTaGAAAATCCTTCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHSNVSF*KILLNV
Trigger: GACATTAAGAAGGATTTTCCAGAAGGAGACATTCGA...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCTCCATGTACTGGCAGTaGGGGCTTGTTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLISMYWQ*GLVPQA
Trigger: GGCCTGAGGAACAAGCCCCCACTGCCAGTACATGGA...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCTGGCGAGCGGAGAGTTaGTTTGTAAGACAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFWRAES*FVRQRF
Trigger: GAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCA...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTGGCGAGCGGAGAGTTaGTTTGTAAGACAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLWRAES*FVRQRF
Trigger: GAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCA...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SAYNMASGELVCKTKVLTLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp GGAGTCAGCAATCATGTCTGCCATTTCCTGGTTAAAATGGGTGATGAAAGCATGAGGGAGCTTATAACCTaGGAGGCTAAGGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GVSNHVCHFLVKMGDESMRELIT*EAKAQH
Trigger: ATGCTGAGCCTTAGCCTCCCAGGTTATAAGCTCCCT...CATGCTTTCATCACCCATTTTAACCAGGAAATGGCAGACATGATTGCTGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440866.6
CDS-3UTR CCA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATAGGGAGCTTATAACCTaGGAGGCTAAGGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHRELIT*EAKAQH
Trigger: ATGCTGAGCCTTAGCCTCCCAGGTTATAAGCTCCCT...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGAACTCCATCCTCAATaGCTAGCACACTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYELHPQ*LAHYLA
Trigger: AGCCAAATAGTGTGCTAGCCATTGAGGATGGAGTTC...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATATCCATGTGGTTGACTaGGACATACAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHIHVVD*DIQAEL
Trigger: CAGCTCTGCCTGTATGTCCCAGTCAACCACATGGAT...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTATGGTGAGAGGCCCTTaGTGGCCATGGACATCAGGC +
Preference number: 4 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFMVRGP*WPWTSG
Trigger: GCCTGATGTCCATGGCCACCAAGGGCCTCTCACCAT...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCAAATCAAGCCTTTGGTaGTCCGTGTCTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFKSSLW*SVSLQR
Trigger: CCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CTCTCAAACTGGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCCTCCACCACACAAAATaGATTCCTCATGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: LSNWPCLAVTSLLNLAPFLHHTK*IPHAQE
Trigger: TTCCTGTGCATGAGGAATTCATTTTGTGTGGTGGAG...GAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR TCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGAACGCATGCCCAGCATaGCTGATAGTCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWNACPA*LIVQTG
Trigger: TCCAGTTTGGACTATCAGTCATGCTGGGCATGCGTT...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR TCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCGAAATAGCTGCCTATTaGATGGCCAATGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFEIAAY*MANEHK
Trigger: CTTGTGCTCATTGGCCATTCAATAGGCAGCTATTTC...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATTGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYWVMKA*GMFFSQ
Trigger: CTGTGAGAAAAACATACCTCATGCTTTCATCACCCA...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCGGGGGCTTTAGGATTTaGGCGGAGGGACATCTCATT +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSGGFRI*AEGHLI
Trigger: AATGAGATGTCCCTCCGCTCAAATCCTAAAGCCCCC...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGTCCCAGTACAACCACTaGAATCAGAAAATTAACAGT +
Preference number: 4 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLSQYNH*NQKINS
Trigger: ACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGA...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCGACAGTAAACAGACATaGTGCCCCTCACCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSDSKQT*CPSPPD
Trigger: ATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTC...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCGTGGAGTGGCAATTCTaGCATTGGGTGACTCAGACA +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFVEWQF*HWVTQT
Trigger: TGTCTGAGTCACCCAATGGCAGAATTGCCACTCCAC...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR GCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCCTGTGTACAGCCCTGTaGTTACGGCCTATGTATCTA +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTLCTAL*LRPMYL
Trigger: TAGATACATAGGCCGTAAGCACAGGGCTGTACACAG...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCAATTGTACCCTCTCTTaGCCAACACAGAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTINCTLS*PTQRSG
Trigger: GCCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATT...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCACCACATTTTAGAACCTaGGTTTCGGCTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSPHFRT*VSAPPH
Trigger: GTGTGGTGGAGCCGAAACCCAGGTTCTAAAATGTGG...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000626491.2
CDS-3UTR CCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGAAAGGCAGAAAAACCTaGGTTACCAGGAATAATGAA +
Preference number: 4 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLKGRKT*VTRNNE
Trigger: TTCATTATTCCTGGTAACCCAGGTTTTTCTGCCTTT...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000440866.6
CDS-3UTR CCA 90 bp GAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGACTGATAGTCCAAACTaGAAAGCGTCTGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: EKSSLWWSVSLQRLSGEATDSPN*KASVCQ
Trigger: TTGACAAACAGACGCTTTCCAGTTTGGACTATCAGT...CGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAATGGCAATTCTGCCATTaGGTGACTCAGACATTCGTT +
Preference number: 4 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGEWQFCH*VTQTFV
Trigger: AACGAATGTCTGAGTCACCCAATGGCAGAATTGCCA...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCAGCACAAAAGTGGAGTaGCAATTCTGCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTSTKVE*QFCHWV
Trigger: CACCCAATGGCAGAATTGCCACTCCACTTTTGTGCT...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATAAACCAGCACAAAAGTaGAGTGGCAATTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYKPAQK*SGNSAI
Trigger: AATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTT...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACATAAATGCTCCTTTATaGTTTCGTCATCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDINAPL*FRHLSS
Trigger: TGAAGAGAGATGACGAAACCATAAAGGAGCATTTAT...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACTTCATAGTACTCTTTTaGACACCAAGGATCTATAGT +
Preference number: 4 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDFIVLF*TPRIYS
Trigger: ACTATAGATCCTTGGTGTCCAAAAGAGTACTATGAA...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGATGTCTGCCATTTCCTaGTTAAAATGGGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLMSAIS*LKWVMK
Trigger: TTTCATCACCCATTTTAACCAGGAAATGGCAGACAT...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGTCCATGTACTGGCAGTaGGGGCTTGTTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWSMYWQ*GLVPQA
Trigger: GGCCTGAGGAACAAGCCCCCACTGCCAGTACATGGA...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTGGCGAGCGGAGAGTTaGTTTGTAAGACAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: PITWRAESWFVRQRFSLSWRAES*FVRQRF
Trigger: GAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCA...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGATTGCTGGTTGTCCTGTaGCAGGAGGCACAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRLLVVL*QEAQLG
Trigger: CCCCAACTGTGCCTCCTGCCACAGGACAACCAGCAA...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGAGGGAGCTTATAACCTaGGAGGCTAAGGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWRELIT*EAKAQH
Trigger: ATGCTGAGCCTTAGCCTCCCAGGTTATAAGCTCCCT...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGGAGCAACTGTACGTTaGCACATCCAAGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWGATVR*HIQACF
Trigger: AAAGCAGGCTTGGATGTGCCAACGTACAGTTGCTCC...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCTCAGGCCAATTTACATTTTGGACAAGTCATCCTTTAGGGAGTCAGCAATCAGGAGCAACTGTACGTTaGCACATCCAAGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SSGQFTFWTSHPLGSQQSGATVR*HIQACF
Trigger: AAAGCAGGCTTGGATGTGCCAACGTACAGTTGCTCC...TGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440866.6
CDS-3UTR CCA 90 bp GAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGCACTTACCAATAAGTTaGCAGCAAATCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: EKSSLWWSVSLQRLSGEAHLPIS*QQIRAK
Trigger: TTTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTG...CGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGCAAAGACCATCCATGTaGTTGACTGGGACATACAGG +
Preference number: 4 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWQRPSM*LTGTYR
Trigger: CCTGTATGTCCCAGTCAACCACATGGATGGTCTTTG...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCGCCACAGAGGGCTTGTaGAGATGCTTATGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIATEGL*RCLWLG
Trigger: TCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGC...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGAAATCAAGCCTTTGGTaGTCCGTGTCTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWKSSLW*SVSLQR
Trigger: CCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGAGGGATTTCCTATTTTaGACAAGTCATCCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: EKSSLWWSVSLQRLSGEARDFLF*TSHPLG
Trigger: CCCTAAAGGATGACTTGTCCAAAATAGGAAATCCCT...CGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
CDS-3UTR CCA 90 bp CCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCTGTGCTACTCTTAAGTCCCTCTCAAACTaGCCCTGCTTAGCAGTAACA +
Preference number: 4 (lower is better)
Translates to: PCLAVTSLLNLAPFCATLKSLSN*PCLAVT
Trigger: TGTTACTGCTAAGCAGGGCCAGTTTGAGAGGGACTT...AAGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR TCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCTCCACCACACAAAATaGATTCCTCATGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTILHHTK*IPHAQE
Trigger: TTCCTGTGCATGAGGAATTCATTTTGTGTGGTGGAG...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR TCA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGCTCCACCACACAAAATaGATTCCTCATGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWLHHTK*IPHAQE
Trigger: TTCCTGTGCATGAGGAATTCATTTTGTGTGGTGGAG...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000626491.2
CDS-3UTR TCA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATATGTCCTTTGGCACATaGGTTCTCAGGAAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHMSFGT*VLRKAS
Trigger: ACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACAT...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAACTATTGAATGGCCAATaGGCACAAGTTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGELLNGQ*AQVSCP
Trigger: AGGACATGAAACTTGTGCTCATTGGCCATTCAATAG...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTCTATTGAATGGCCAATaGGCACAAGTTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLLLNGQ*AQVSCP
Trigger: AGGACATGAAACTTGTGCTCATTGGCCATTCAATAG...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCGAAATAGCTGCCTATTaGATGGCCAATGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTIEIAAY*MANEHK
Trigger: CTTGTGCTCATTGGCCATTCAATAGGCAGCTATTTC...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTAATTCTGCCATTGGGTaGCTCAGACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLNSAIG*LRHSFN
Trigger: ATTGAACGAATGTCTGAGTCACCCAATGGCAGAATT...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCTAGGTTCATTACTTaGAGGCCCCTTCTGATTAGC +
Preference number: 4 (lower is better)
Translates to: PITWRAESWFVRQRFSLSSRFIT*RPLLIS
Trigger: GCTAATCAGAAGGGGCCTTCAAGTAATGAACCTAGA...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLWVMKA*GMFFSQ
Trigger: CTGTGAGAAAAACATACCTCATGCTTTCATCACCCA...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGACTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRLSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAGTGGAGTGGCAATTCTaGCATTGGGTGACTCAGACA +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRVEWQF*HWVTQT
Trigger: TGTCTGAGTCACCCAATGGCAGAATTGCCACTCCAC...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCACCACTGGGCATCTTGTaGAAACACAAGACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSPLGIL*KHKTLC
Trigger: ACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR GCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCCCACTGGGCATCTTGTaGAAACACAAGACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFPLGIL*KHKTLC
Trigger: ACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR GCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGCTGTGTACAGCCCTGTaGTTACGGCCTATGTATCTA +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWLCTAL*LRPMYL
Trigger: TAGATACATAGGCCGTAAGCACAGGGCTGTACACAG...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACAATTGTACCCTCTCTTaGCCAACACAGAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYNCTLS*PTQRSG
Trigger: GCCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATT...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLTYRQS*FWKMDF
Trigger: GAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGT...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFTYRQS*FWKMDF
Trigger: GAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGT...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGACCTCATTCAAGTTGTaGAAATTGTCTCAACAATGT +
Preference number: 4 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLTSFKL*KLSQQC
Trigger: ACATTGTTGAGACAATTTGCACAACTTGAATGAGGT...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTCATTCGTTCAATTGTTaGAAAGAGCAGAAAGGCACG +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLHSFNC*KEQKGT
Trigger: CGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATG...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGTGGCAATTCTGCCATTaGGTGACTCAGACATTCGTT +
Preference number: 4 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWWQFCH*VTQTFV
Trigger: AACGAATGTCTGAGTCACCCAATGGCAGAATTGCCA...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTGGCAATTCTGCCATTaGGTGACTCAGACATTCGTT +
Preference number: 4 (lower is better)
Translates to: PITWRAESWFVRQRFSLSWQFCH*VTQTFV
Trigger: AACGAATGTCTGAGTCACCCAATGGCAGAATTGCCA...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAGCACAAAAGTGGAGTaGCAATTCTGCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFSTKVE*QFCHWV
Trigger: CACCCAATGGCAGAATTGCCACTCCACTTTTGTGCT...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTAAACCAGCACAAAAGTaGAGTGGCAATTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLKPAQK*SGNSAI
Trigger: AATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTT...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGTCGAATGTCTCCTTCTaGAAAATCCTTCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLSNVSF*KILLNV
Trigger: GACATTAAGAAGGATTTTCCAGAAGGAGACATTCGA...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGACTGCCTCCATGTACTaGCAGTGGGGGCTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWTASMY*QWGLVP
Trigger: AGGAACAAGCCCCCACTGCCAGTACATGGAGGCAGT...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAATCCATGTGGTTGACTaGGACATACAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRIHVVD*DIQAEL
Trigger: CAGCTCTGCCTGTATGTCCCAGTCAACCACATGGAT...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCATCCATGTGGTTGACTaGGACATACAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSIHVVD*DIQAEL
Trigger: CAGCTCTGCCTGTATGTCCCAGTCAACCACATGGAT...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAGCCACAGAGGGCTTGTaGAGATGCTTATGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRATEGL*RCLWLG
Trigger: TCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGC...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACAAATCAAGCCTTTGGTaGTCCGTGTCTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYKSSLW*SVSLQR
Trigger: CCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAAAGGCAGAAAAACCTaGGTTACCTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFKGRKT*VTCPPG
Trigger: TCCAGGTGGACAGGTAACCCAGGTTTTTCTGCCTTT...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541941.5
CDS-3UTR TCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTAACGCATGCCCAGCATaGCTGATAGTCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFNACPA*LIVQTG
Trigger: TCCAGTTTGGACTATCAGTCATGCTGGGCATGCGTT...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR TCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACATGTCCTTTGGCACATaGGTTCTCAGGAAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYMSFGT*VLRKAS
Trigger: ACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACAT...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACGAAATAGCTGCCTATTaGATGGCCAATGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYEIAAY*MANEHK
Trigger: CTTGTGCTCATTGGCCATTCAATAGGCAGCTATTTC...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCAATTCTGCCATTGGGTaGCTCAGACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTINSAIG*LRHSFN
Trigger: ATTGAACGAATGTCTGAGTCACCCAATGGCAGAATT...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCAATTCTGCCATTGGGTaGCTCAGACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTNSAIG*LRHSFN
Trigger: ATTGAACGAATGTCTGAGTCACCCAATGGCAGAATT...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACTCTAGGTTCATTACTTaGAGGCCCCTTCTGATTAGC +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYSRFIT*RPLLIS
Trigger: GCTAATCAGAAGGGGCCTTCAAGTAATGAACCTAGA...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCTCTAGGTTCATTACTTaGAGGCCCCTTCTGATTAGC +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFSRFIT*RPLLIS
Trigger: GCTAATCAGAAGGGGCCTTCAAGTAATGAACCTAGA...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCTGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTIWVMKA*GMFFSQ
Trigger: CTGTGAGAAAAACATACCTCATGCTTTCATCACCCA...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTCTAAGTCTAGTACACTaGCTGCCTCCATGTACTGGC +
Preference number: 4 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFLSLVH*LPPCTG
Trigger: GCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAG...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCAGAAGTCACTTGCTGTaGTGTAGAAGCTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTIRSHLL*CRSYAK
Trigger: TTTGGCATAGCTTCTACATCACAGCAAGTGACTTCT...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGTTAAAAGAGAGACTTTaGGCCGAGTCTAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWLKERL*AESNSG
Trigger: TCCTGAGTTAGACTCGGCTCAAAGTCTCTCTTTTAA...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTATGTCCTTAATTTCTTaGGCGTTTGAATCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLMSLIS*AFESVH
Trigger: GTGGACAGATTCAAACGCTCAAGAAATTAAGGACAT...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619656.4
CDS-3UTR GCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCGTGGAGTGGCAATTCTaGCATTGGGTGACTCAGACA +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIVEWQF*HWVTQT
Trigger: TGTCTGAGTCACCCAATGGCAGAATTGCCACTCCAC...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGGTAAGCTTACATAAATaGTCCTTTATGGTTTCGTCA +
Preference number: 4 (lower is better)
Translates to: EKSSLWWSVSLQRLSGEAVSLHK*SFMVSS
Trigger: TGACGAAACCATAAAGGAGCATTTATGTAAGCTTAC...CGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGGTAAGCTTACATAAATaGTCCTTTATGGTTTCGTCA +
Preference number: 4 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLVSLHK*SFMVSS
Trigger: TGACGAAACCATAAAGGAGCATTTATGTAAGCTTAC...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR GCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCCACTGGGCATCTTGTaGAAACACAAGACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSPLGIL*KHKTLC
Trigger: ACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAAATTGTACCCTCTCTTaGCCAACACAGAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRNCTLS*PTQRSG
Trigger: GCCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATT...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATACATACAGGCAGAGCTaGTTCTGGAAAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHTYRQS*FWKMDF
Trigger: GAAATCCATTTTCCAGAAGCAGCTCTGCCTGTATGT...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CCTCTCAAACTGGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTATCGCTATTAAATCTTaGTCCCTTCTGTGCTACTCT +
Preference number: 4 (lower is better)
Translates to: PLKLALLSSNIAIKSCSLIAIKS*SLLCYS
Trigger: AGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGAT...AAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCCCACATTTTAGAACCTaGGTTTCGGCTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIPHFRT*VSAPPH
Trigger: GTGTGGTGGAGCCGAAACCCAGGTTCTAAAATGTGG...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCGAATCTTCTTGTCTTTaGGAGCCAACGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIESSCL*EPTHAQ
Trigger: CTGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTC...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAAAGTTTCATGTCCTTTaGCACATGAGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGEKFHVL*HMSSQE
Trigger: TTCCTGAGAACTCATGTGCCAAAGGACATGAAACTT...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCAAGTTTCATGTCCTTTaGCACATGAGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFKFHVL*HMSSQE
Trigger: TTCCTGAGAACTCATGTGCCAAAGGACATGAAACTT...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTAAGTTTCATGTCCTTTaGCACATGAGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLKFHVL*HMSSQE
Trigger: TTCCTGAGAACTCATGTGCCAAAGGACATGAAACTT...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTCATTCGTTCAATTGTTaGAAAGAGCAGAAAGGCACG +
Preference number: 4 (lower is better)
Translates to: PITWRAESWFVRQRFSLSHSFNC*KEQKGT
Trigger: CGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATG...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTAGGGAGCTTATAACCTaGGAGGCTAAGGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFRELIT*EAKAQH
Trigger: ATGCTGAGCCTTAGCCTCCCAGGTTATAAGCTCCCT...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGAACTCCATCCTCAATaGCTAGCACACTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWELHPQ*LAHYLA
Trigger: AGCCAAATAGTGTGCTAGCCATTGAGGATGGAGTTC...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCATCCATGTGGTTGACTaGGACATACAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIIHVVD*DIQAEL
Trigger: CAGCTCTGCCTGTATGTCCCAGTCAACCACATGGAT...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAAAGACCATCCATGTaGTTGACTGGGACATACAGG +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSQRPSM*LTGTYR
Trigger: CCTGTATGTCCCAGTCAACCACATGGATGGTCTTTG...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGACTCCACCACACAAAATaGATTCCTCATGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRLHHTK*IPHAQE
Trigger: TTCCTGTGCATGAGGAATTCATTTTGTGTGGTGGAG...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000435420.6
ENST00000440866.6
CDS-3UTR TCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGAACGCATGCCCAGCATaGCTGATAGTCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWNACPA*LIVQTG
Trigger: TCCAGTTTGGACTATCAGTCATGCTGGGCATGCGTT...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237822.8
ENST00000440866.6
ENST00000541941.5
CDS-3UTR TCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCATGTCCTTTGGCACATaGGTTCTCAGGAAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSMSFGT*VLRKAS
Trigger: ACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACAT...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAGAAGTCACTTGCTGTaGTGTAGAAGCTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFRSHLL*CRSYAK
Trigger: TTTGGCATAGCTTCTACATCACAGCAAGTGACTTCT...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCTCCCAGTACAACCACTaGAATCAGAAAATTAACAGT +
Preference number: 4 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFSQYNH*NQKINS
Trigger: ACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGA...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCGGAATGATAATGCCATaGGGGATTTCCTATTTTGGA +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTGMIMP*GISYFG
Trigger: TCCAAAATAGGAAATCCCTCATGGCATTATCATTCC...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
CDS-3UTR GCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTAATTGTACCCTCTCTTaGCCAACACAGAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFNCTLS*PTQRSG
Trigger: GCCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATT...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATACCTCATTCAAGTTGTaGAAATTGTCTCAACAATGT +
Preference number: 4 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYTSFKL*KLSQQC
Trigger: ACATTGTTGAGACAATTTGCACAACTTGAATGAGGT...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTAAAGGCAGAAAAACCTaGGTTACCAGGAATAATGAA +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLKGRKT*VTRNNE
Trigger: TTCATTATTCCTGGTAACCCAGGTTTTTCTGCCTTT...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237822.8
ENST00000440866.6
CDS-3UTR CCA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATAAGTTTCATGTCCTTTaGCACATGAGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHKFHVL*HMSSQE
Trigger: TTCCTGAGAACTCATGTGCCAAAGGACATGAAACTT...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACCATTCGTTCAATTGTTaGAAAGAGCAGAAAGGCACG +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYHSFNC*KEQKGT
Trigger: CGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATG...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCCATTCGTTCAATTGTTaGAAAGAGCAGAAAGGCACG +
Preference number: 4 (lower is better)
Translates to: YNMASGELVCKTKVLTFFHSFNC*KEQKGT
Trigger: CGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATG...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGAAACCAGCACAAAAGTaGAGTGGCAATTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWKPAQK*SGNSAI
Trigger: AATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTT...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTTTCATAGTACTCTTTTaGACACCAAGGATCTATAGT +
Preference number: 4 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSFIVLF*TPRIYS
Trigger: ACTATAGATCCTTGGTGTCCAAAAGAGTACTATGAA...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTATGTCTGCCATTTCCTaGTTAAAATGGGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: SAYNMASGELVCKTKVLTMSAIS*LKWVMK
Trigger: TTTCATCACCCATTTTAACCAGGAAATGGCAGACAT...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATCACTTACCAATAAGTTaGCAGCAAATCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHHLPIS*QQIRAK
Trigger: TTTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTG...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTAAATCAAGCCTTTGGTaGTCCGTGTCTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFKSSLW*SVSLQR
Trigger: CCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACCTTCCACCAATAAGTTaGCAGCAAATCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYLPPIS*QQIRAK
Trigger: TTTGGCTCTGATTTGCTGCCAACTTATTGGTGGAAG...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
3UTR CAA 72 bp GTGTTTACTTCAGCCTATAACATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTTCTCACTTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: VFTSAYNMASGE*VCKTKVLTFFI
Trigger: AATGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAGTAAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCTGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSWVMKA*GMFFSQ
Trigger: CTGTGAGAAAAACATACCTCATGCTTTCATCACCCA...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCCCAGTACAACCACTaGAATCAGAAAATTAACAGT +
Preference number: 4 (lower is better)
Translates to: PITWRAESWFVRQRFSLSSQYNH*NQKINS
Trigger: ACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGA...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCTCCCAGTACAACCACTaGAATCAGAAAATTAACAGT +
Preference number: 4 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTSQYNH*NQKINS
Trigger: ACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGA...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCTGTGTACAGCCCTGTaGTTACGGCCTATGTATCTA +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWLCTAL*LRPMYL
Trigger: TAGATACATAGGCCGTAAGCACAGGGCTGTACACAG...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAACCTCATTCAAGTTGTaGAAATTGTCTCAACAATGT +
Preference number: 4 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGETSFKL*KLSQQC
Trigger: ACATTGTTGAGACAATTTGCACAACTTGAATGAGGT...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTACCTCATTCAAGTTGTaGAAATTGTCTCAACAATGT +
Preference number: 4 (lower is better)
Translates to: QPITWRAESWFVRQRFSLTSFKL*KLSQQC
Trigger: ACATTGTTGAGACAATTTGCACAACTTGAATGAGGT...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp CATGCTAGAATTCTCACAGATTTAAAGGAGGTAGTTTGCATCTCCATGGTATTACTCTCAAACTGGCCCTaGTTAGCAGTAACATCGCTA +
Preference number: 4 (lower is better)
Translates to: HARILTDLKEVVCISMVLLSNWP*LAVTSL
Trigger: TAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAG...TAATACCATGGAGATGCAAACTACCTCCTTTAAATCTGTGAGAATTCTAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGAAGTTTCATGTCCTTTaGCACATGAGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWKFHVL*HMSSQE
Trigger: TTCCTGAGAACTCATGTGCCAAAGGACATGAAACTT...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATTCGAATGTCTCCTTCTaGAAAATCCTTCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHSNVSF*KILLNV
Trigger: GACATTAAGAAGGATTTTCCAGAAGGAGACATTCGA...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGTCGAATGTCTCCTTCTaGAAAATCCTTCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWSNVSF*KILLNV
Trigger: GACATTAAGAAGGATTTTCCAGAAGGAGACATTCGA...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCGAATGTCTCCTTCTaGAAAATCCTTCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: PITWRAESWFVRQRFSLSSNVSF*KILLNV
Trigger: GACATTAAGAAGGATTTTCCAGAAGGAGACATTCGA...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTATGTCTGCCATTTCCTaGTTAAAATGGGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: PITWRAESWFVRQRFSLSMSAIS*LKWVMK
Trigger: TTTCATCACCCATTTTAACCAGGAAATGGCAGACAT...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCTTCAGCCTATAACATaGCGAGCGGAGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWLQPIT*RAESWF
Trigger: AAACCAACTCTCCGCTCGCCATGTTATAGGCTGAAG...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGACAAAGACCATCCATGTaGTTGACTGGGACATACAGG +
Preference number: 4 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRQRPSM*LTGTYR
Trigger: CCTGTATGTCCCAGTCAACCACATGGATGGTCTTTG...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAAAATCAAGCCTTTGGTaGTCCGTGTCTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRKSSLW*SVSLQR
Trigger: CCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCTCCACCACACAAAATaGATTCCTCATGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWLHHTK*IPHAQE
Trigger: TTCCTGTGCATGAGGAATTCATTTTGTGTGGTGGAG...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000626491.2
CDS-3UTR TCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGATGTCCTTAATTTCTTaGGCGTTTGAATCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWMSLIS*AFESSD
Trigger: ATCAGAGGATTCAAACGCTCAAGAAATTAAGGACAT...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR TCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTCTATTGAATGGCCAATaGGCACAAGTTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFLLNGQ*AQVSCP
Trigger: AGGACATGAAACTTGTGCTCATTGGCCATTCAATAG...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAGAAATAGCTGCCTATTaGATGGCCAATGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNREIAAY*MANEHK
Trigger: CTTGTGCTCATTGGCCATTCAATAGGCAGCTATTTC...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR TCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGTCTAGGTTCATTACTTaGAGGCCCCTTCTGATTAGC +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWSRFIT*RPLLIS
Trigger: GCTAATCAGAAGGGGCCTTCAAGTAATGAACCTAGA...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACATGTCCTTAATTTCTTaGGCGTTTGAATCCAGACTT +
Preference number: 4 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYMSLIS*AFESRL
Trigger: AAGTCTGGATTCAAACGCTCAAGAAATTAAGGACAT...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435420.6
CDS-3UTR GCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCACCTCATTCAAGTTGTaGAAATTGTCTCAACAATGT +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTITSFKL*KLSQQC
Trigger: ACATTGTTGAGACAATTTGCACAACTTGAATGAGGT...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCTCAGGCCAATTTACATTTTGGACAAGTCATCCTTTAGGGAGTCAGCAATCAAAAGGCAGAAAAACCTaGGTTACCAGGAATAATGAA +
Preference number: 4 (lower is better)
Translates to: SSGQFTFWTSHPLGSQQSKGRKT*VTRNNE
Trigger: TTCATTATTCCTGGTAACCCAGGTTTTTCTGCCTTT...TGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440866.6
CDS-3UTR CCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAACTGATAGTCCAAACTaGAAAGCGTCTGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRTDSPN*KASVCQ
Trigger: TTGACAAACAGACGCTTTCCAGTTTGGACTATCAGT...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGATAAATGCTCCTTTATaGTTTCGTCATCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWINAPL*FRHLSS
Trigger: TGAAGAGAGATGACGAAACCATAAAGGAGCATTTAT...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCTTCATAGTACTCTTTTaGACACCAAGGATCTATAGT +
Preference number: 4 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTIFIVLF*TPRIYS
Trigger: ACTATAGATCCTTGGTGTCCAAAAGAGTACTATGAA...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCTCAGGCCAATTTACATTTTGGACAAGTCATCCTTTAGGGAGTCAGCAATCAATGTCTGCCATTTCCTaGTTAAAATGGGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: SSGQFTFWTSHPLGSQQSMSAIS*LKWVMK
Trigger: TTTCATCACCCATTTTAACCAGGAAATGGCAGACAT...TGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440866.6
CDS-3UTR CCA 90 bp CATGCTAGAATTCTCACAGATTTAAAGGAGGTAGTTTGCATCTCCATGGTATTAAATGCTATTAAGAGGTaGAGAGGGGTCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HARILTDLKEVVCISMVLNAIKR*RGVFGK
Trigger: CTTCCCAAAGACCCCTCTCCACCTCTTAATAGCATT...TAATACCATGGAGATGCAAACTACCTCCTTTAAATCTGTGAGAATTCTAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR TCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGTGGGTGATGAAAGCATaGGGTATGTTTTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWWVMKA*GMFFSQ
Trigger: CTGTGAGAAAAACATACCTCATGCTTTCATCACCCA...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR TCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCGGAATGATAATGCCATaGGGGATTTCCTATTTTGGA +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIGMIMP*GISYFG
Trigger: TCCAAAATAGGAAATCCCTCATGGCATTATCATTCC...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
CDS-3UTR GCA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAGTAAGCTTACATAAATaGTCCTTTATGGTTTCGTCA +
Preference number: 4 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSVSLHK*SFMVSS
Trigger: TGACGAAACCATAAAGGAGCATTTATGTAAGCTTAC...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCACTGATAGTCCAAACTaGAAAGCGTCTGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLITDSPN*KASVCQ
Trigger: TTGACAAACAGACGCTTTCCAGTTTGGACTATCAGT...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CCA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAATAAATGCTCCTTTATaGTTTCGTCATCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSINAPL*FRHLSS
Trigger: TGAAGAGAGATGACGAAACCATAAAGGAGCATTTAT...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGTTCATAGTACTCTTTTaGACACCAAGGATCTATAGT +
Preference number: 4 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWFIVLF*TPRIYS
Trigger: ACTATAGATCCTTGGTGTCCAAAAGAGTACTATGAA...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCATGTCTGCCATTTCCTaGTTAAAATGGGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSMSAIS*LKWVMK
Trigger: TTTCATCACCCATTTTAACCAGGAAATGGCAGACAT...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGACTTCCACCAATAAGTTaGCAGCAAATCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRLPPIS*QQIRAK
Trigger: TTTGGCTCTGATTTGCTGCCAACTTATTGGTGGAAG...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
CDS-3UTR TCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCATGTCCTTAATTTCTTaGGCGTTTGAATCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIMSLIS*AFESSD
Trigger: ATCAGAGGATTCAAACGCTCAAGAAATTAAGGACAT...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR GCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCGTAAGCTTACATAAATaGTCCTTTATGGTTTCGTCA +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSVSLHK*SFMVSS
Trigger: TGACGAAACCATAAAGGAGCATTTATGTAAGCTTAC...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAGTAAGCTTACATAAATaGTCCTTTATGGTTTCGTCA +
Preference number: 4 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRVSLHK*SFMVSS
Trigger: TGACGAAACCATAAAGGAGCATTTATGTAAGCTTAC...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAAAGTTTCATGTCCTTTaGCACATGAGTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRKFHVL*HMSSQE
Trigger: TTCCTGAGAACTCATGTGCCAAAGGACATGAAACTT...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCATAAATGCTCCTTTATaGTTTCGTCATCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSINAPL*FRHLSS
Trigger: TGAAGAGAGATGACGAAACCATAAAGGAGCATTTAT...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTTCGAATGTCTCCTTCTaGAAAATCCTTCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFSNVSF*KILLNV
Trigger: GACATTAAGAAGGATTTTCCAGAAGGAGACATTCGA...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp TTTACATTTTGGACAAGTCATCCTTTAGGGAGTCAGCAATCATGTCTGCCATTTTCGAATGTCTCCTTCTaGAAAATCCTTCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: FTFWTSHPLGSQQSCLPFSNVSF*KILLNV
Trigger: GACATTAAGAAGGATTTTCCAGAAGGAGACATTCGA...AAATGGCAGACATGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440866.6
CDS-3UTR CCA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCATGTCTGCCATTTCCTaGTTAAAATGGGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: STTTEIRKLTVASYSQLIMSAIS*LKWVMK
Trigger: TTTCATCACCCATTTTAACCAGGAAATGGCAGACAT...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGACACTTACCAATAAGTTaGCAGCAAATCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRHLPIS*QQIRAK
Trigger: TTTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTG...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR GCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGGTAAGCTTACATAAATaGTCCTTTATGGTTTCGTCA +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWVSLHK*SFMVSS
Trigger: TGACGAAACCATAAAGGAGCATTTATGTAAGCTTAC...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CCA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGATTCATAGTACTCTTTTaGACACCAAGGATCTATAGT +
Preference number: 4 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRFIVLF*TPRIYS
Trigger: ACTATAGATCCTTGGTGTCCAAAAGAGTACTATGAA...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CCA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGTTCATAGTACTCTTTTaGACACCAAGGATCTATAGT +
Preference number: 4 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWFIVLF*TPRIYS
Trigger: ACTATAGATCCTTGGTGTCCAAAAGAGTACTATGAA...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACCACCTCCATCATTTCTaGGCCCCCAAGGTAGGCAGC +
Preference number: 5 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDHLHHF*APKVGS
Trigger: GCTGCCTACCTTGGGGGCCAAGAAATGATGGAGGTG...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACTATGGTGAGAGGCCCTaGGTGGCCATGGACATCAGG +
Preference number: 5 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDYGERP*VAMDIR
Trigger: CCTGATGTCCATGGCCACCAAGGGCCTCTCACCATA...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGCACCTCCATCATTTCTaGGCCCCCAAGGTAGGCAGC +
Preference number: 5 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMHLHHF*APKVGS
Trigger: GCTGCCTACCTTGGGGGCCAAGAAATGATGGAGGTG...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGTATGGTGAGAGGCCCTaGGTGGCCATGGACATCAGG +
Preference number: 5 (lower is better)
Translates to: IRPHKPQRACGDAYGWEQYGERP*VAMDIR
Trigger: CCTGATGTCCATGGCCACCAAGGGCCTCTCACCATA...CTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACCACCTCCATCATTTCTaGGCCCCCAAGGTAGGCAGC +
Preference number: 5 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDHLHHF*APKVGS
Trigger: GCTGCCTACCTTGGGGGCCAAGAAATGATGGAGGTG...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTACTGGCAGTGGGGGCTaGTTCCTCAGGCCAATTTAC +
Preference number: 5 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTTGSGG*FLRPIY
Trigger: GTAAATTGGCCTGAGGAACAAGCCCCCACTGCCAGT...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCGTGTCTCTCCAAAGGTaGAGTGGAGAAGCGTATGGT +
Preference number: 5 (lower is better)
Translates to: LGGHGHQATQATEGLWRCVSLQR*SGEAYG
Trigger: ACCATACGCTTCTCCACTCAACCTTTGGAGAGACAC...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCCTGATTAGCAAGGACTaGATTGTCTCAGGACACGGT +
Preference number: 5 (lower is better)
Translates to: LGGHGHQATQATEGLWRCLISKD*IVSGHG
Trigger: ACCGTGTCCTGAGACAATCAAGTCCTTGCTAATCAG...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGACATCCAAGCCTGCTTaGGGACAGCCCAGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLTSKPA*GQPSAS
Trigger: AGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATGT...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCAAATTGTACCCTCTCTaGCCCAACACAGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: LGGHGHQATQATEGLWRCKLYPL*PNTEIR
Trigger: CCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATTT...GCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACGTGTCTCTCCAAAGGTaGAGTGGAGAAGCGTATGGT +
Preference number: 5 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDVSLQR*SGEAYG
Trigger: ACCATACGCTTCTCCACTCAACCTTTGGAGAGACAC...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS TCA 90 bp TGCCTCCTGTGTCCACCACGAGAGGACAGCAAGAATGCCACCCTCTaGTGTTGTAAGAATCTTCTTGTCTTTGGGAGCCAACGCATGCCC +
Preference number: 5 (lower is better)
Translates to: CLLCPPREDSKNATL*CCKNLLVFGSQRMP
Trigger: GGGCATGCGTTGGCTCCCAAAGACAAGAAGATTCTTACAACATCAGAGGGTGGCATTCTTGCTGTCCTCTCGTGGTGGACACAGGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CAA 90 bp TCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGTGGCAATTCTGCCATaGGGTGACTCAGACATTCGT +
Preference number: 5 (lower is better)
Translates to: SVSLQRLSGEAYGERPLVVAILP*GDSDIR
Trigger: ACGAATGTCTGAGTCACCCAATGGCAGAATTGCCAC...CACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGACACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGTGGCAATTCTGCCATaGGGTGACTCAGACATTCGT +
Preference number: 5 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMVAILP*GDSDIR
Trigger: ACGAATGTCTGAGTCACCCAATGGCAGAATTGCCAC...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTACTGGCAGTGGGGGCTaGTTCCTCAGGCCAATTTAC +
Preference number: 5 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTTGSGG*FLRPIY
Trigger: GTAAATTGGCCTGAGGAACAAGCCCCCACTGCCAGT...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGACATCCAAGCCTGCTTaGGGACAGCCCAGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLTSKPA*GQPSAS
Trigger: AGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATGT...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGTGTCTCTCCAAAGGTaGAGTGGAGAAGCGTATGGT +
Preference number: 5 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMVSLQR*SGEAYG
Trigger: ACCATACGCTTCTCCACTCAACCTTTGGAGAGACAC...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACAGAAAAATCAAGCCTTaGGTGGTCCGTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDRKIKP*VVRVSP
Trigger: TGGAGAGACACGGACCACCAAAGGCTTGATTTTTCT...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACAGAATCTTCTTGTCTTaGGGAGCCAACGCATGCCCA +
Preference number: 5 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDRIFLS*GANACP
Trigger: TGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTCT...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp TGCCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCACTGGCAGTGGGGGCTaGTTCCTCAGGCCAATTTAC +
Preference number: 5 (lower is better)
Translates to: CHWASCANTRLCVDHCVPTGSGG*FLRPIY
Trigger: GTAAATTGGCCTGAGGAACAAGCCCCCACTGCCAGT...GGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTGTGCCACTGGGCATCTaGTGCAAACACAAGACTCTG +
Preference number: 5 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTVPLGI*CKHKTL
Trigger: CAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCAC...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAAATTGTACCCTCTCTaGCCCAACACAGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNKLYPL*PNTEIR
Trigger: CCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATTT...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCGGAGAACTGCTCAAATaGTACCCTCTCTTGCCCAAC +
Preference number: 5 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLGELLK*YPLLPN
Trigger: GTTGGGCAAGAGAGGGTACAATTTGAGCAGTTCTCC...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TGCCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCCAAGCCACAGAGGGCTaGTGGAGATGCTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: CHWASCANTRLCVDHCVPQATEG*WRCLWL
Trigger: CAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTG...GGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACATCAGGCCACACAAGAGATGTTGTGTCCAATaGTCATGTCTCTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: GEAYGERPLVAMDIRPHKRCCVQ*SCLFSL
Trigger: GAGACTGAAGAGACATGACAATTGGACACAACATCT...CTTGTGTGGCCTGATGTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACGTTGTAAGAATCTTCTaGTCTTTGGGAGCCAACGCA +
Preference number: 5 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNVVRIF*SLGANA
Trigger: TGCGTTGGCTCCCAAAGACAAGAAGATTCTTACAAC...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCCTGATTAGCAAGGACTaGATTGTCTCAGGACACGGT +
Preference number: 5 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLLISKD*IVSGHG
Trigger: ACCGTGTCCTGAGACAATCAAGTCCTTGCTAATCAG...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACCTGATTAGCAAGGACTaGATTGTCTCAGGACACGGT +
Preference number: 5 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHLISKD*IVSGHG
Trigger: ACCGTGTCCTGAGACAATCAAGTCCTTGCTAATCAG...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 5 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 5 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGGTGCCACTGGGCATCTaGTGCAAACACAAGACTCTG +
Preference number: 5 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLVPLGI*CKHKTL
Trigger: CAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCAC...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAACATCCAAGCCTGCTTaGGGACAGCCCAGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGETSKPA*GQPSAS
Trigger: AGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATGT...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACGCACTTACCAATAAGTaGGCAGCAAATCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNALTNK*AANQSQ
Trigger: TTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTGC...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGCACTTACCAATAAGTaGGCAGCAAATCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYALTNK*AANQSQ
Trigger: TTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTGC...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGGGAGAACTGCTCAAATaGTACCCTCTCTTGCCCAAC +
Preference number: 5 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLGELLK*YPLLPN
Trigger: GTTGGGCAAGAGAGGGTACAATTTGAGCAGTTCTCC...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTCAAGCCACAGAGGGCTaGTGGAGATGCTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSQATEG*WRCLWL
Trigger: CAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTG...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAATATGGTGAGAGGCCCTaGGTGGCCATGGACATCAGG +
Preference number: 5 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGEYGERP*VAMDIR
Trigger: CCTGATGTCCATGGCCACCAAGGGCCTCTCACCATA...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTGTGTCTCTCCAAAGGTaGAGTGGAGAAGCGTATGGT +
Preference number: 5 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTVSLQR*SGEAYG
Trigger: ACCATACGCTTCTCCACTCAACCTTTGGAGAGACAC...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGGTGTCTCTCCAAAGGTaGAGTGGAGAAGCGTATGGT +
Preference number: 5 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLVSLQR*SGEAYG
Trigger: ACCATACGCTTCTCCACTCAACCTTTGGAGAGACAC...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACAGAAAAATCAAGCCTTaGGTGGTCCGTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDRKIKP*VVRVSP
Trigger: TGGAGAGACACGGACCACCAAAGGCTTGATTTTTCT...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CCCTTGGTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATCAGACCTCATTCAAGTaGTGCAAATTGTCTCAACAA +
Preference number: 5 (lower is better)
Translates to: PLVAMDIRPHKPQRACGDQTSFK*CKLSQQ
Trigger: TTGTTGAGACAATTTGCACAACTTGAATGAGGTCTG...ATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCACCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACTCTTCCACCAATAAGTaGGCAGCAAATCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNSSTNK*AANQSQ
Trigger: TTGGCTCTGATTTGCTGCCAACTTATTGGTGGAAGA...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
CDS-3UTR CAA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATTCTTCCACCAATAAGTaGGCAGCAAATCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYSSTNK*AANQSQ
Trigger: TTGGCTCTGATTTGCTGCCAACTTATTGGTGGAAGA...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
CDS-3UTR CAA 90 bp TCTTGCTCCCTTCTGTGCTACTCTTTCTGTCTGTTGTACCTCTGCACCCACCTCTACTCTTTCTGTCTGTaGTACCTCTGCACCCACCTC +
Preference number: 5 (lower is better)
Translates to: SCSLLCYSFCLLYLCTHLYSFCL*YLCTHL
Trigger: GAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTA...GAGGTGGGTGCAGAGGTACAACAGACAGAAAGAGTAGCACAGAAGGGAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CAA 90 bp TGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGCTGGAAAGCGTCTGTTaGTCAAAGAGTATAAAGCCT +
Preference number: 5 (lower is better)
Translates to: WPWTSGHTSHRGLVEMLMLESVC*SKSIKP
Trigger: AGGCTTTATACTCTTTGACAAACAGACGCTTTCCAG...CATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACCAAGTTTCATGTCCTTaGGCACATGAGTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDQVSCP*AHEFSG
Trigger: TCCTGAGAACTCATGTGCCAAAGGACATGAAACTTG...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGACATTCGTTCAATTGTaGGAAAGAGCAGAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMTFVQL*ERAERH
Trigger: GTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGT...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACACATTCGTTCAATTGTaGGAAAGAGCAGAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNTFVQL*ERAERH
Trigger: GTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGT...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCCACCTCCATCATTTCTaGGCCCCCAAGGTAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTHLHHF*APKVGS
Trigger: GCTGCCTACCTTGGGGGCCAAGAAATGATGGAGGTG...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTCACCTCCATCATTTCTaGGCCCCCAAGGTAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PITWRAESWFVRQRFSLSHLHHF*APKVGS
Trigger: GCTGCCTACCTTGGGGGCCAAGAAATGATGGAGGTG...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACAGGCCAATTTACATTTaGGACAAGTCATCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDRPIYI*DKSSFR
Trigger: CCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCT...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTACTGGCAGTGGGGGCTaGTTCCTCAGGCCAATTTAC +
Preference number: 5 (lower is better)
Translates to: QPITWRAESWFVRQRFSLTGSGG*FLRPIY
Trigger: GTAAATTGGCCTGAGGAACAAGCCCCCACTGCCAGT...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTGTGCCACTGGGCATCTaGTGCAAACACAAGACTCTG +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSVPLGI*CKHKTL
Trigger: CAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCAC...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACACATTAGACGTCACATaGATGATCTCAGCCAAGATC +
Preference number: 5 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNTLDVT*MISAKI
Trigger: GATCTTGGCTGAGATCATCAATGTGACGTCTAATGT...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGACATCCAAGCCTGCTTaGGGACAGCCCAGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWTSKPA*GQPSAS
Trigger: AGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATGT...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATTATGGTGAGAGGCCCTaGGTGGCCATGGACATCAGG +
Preference number: 5 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHYGERP*VAMDIR
Trigger: CCTGATGTCCATGGCCACCAAGGGCCTCTCACCATA...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATAGATGTTGTGTCCAATaGTCATGTCTCTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYRCCVQ*SCLFSL
Trigger: GAGACTGAAGAGACATGACAATTGGACACAACATCT...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGGACCAGACCTCATTCAAGTaGTGCAAATTGTCTCAACAA +
Preference number: 5 (lower is better)
Translates to: LQRLSGEAYGERPLVAMDQTSFK*CKLSQQ
Trigger: TTGTTGAGACAATTTGCACAACTTGAATGAGGTCTG...GTCCATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GTGGCCATGGACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGAGGGATTTCCTATTTaGGACAAGTCATCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: VAMDIRPHKPQRACGDAYEGFPI*DKSSFR
Trigger: CCTAAAGGATGACTTGTCCAAAATAGGAAATCCCTC...ATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGTCCATGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTAGAATCTTCTTGTCTTaGGGAGCCAACGCATGCCCA +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSRIFLS*GANACP
Trigger: TGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTCT...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237822.8
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp TCTCTCCAAAGGTTGAGTGGAGAAGCGTATGGTGAGAGGCCCTTGGTGGCCATGCTCAGGAAAGCTAGTTaGTGCTCTATTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: SLQRLSGEAYGERPLVAMLRKAS*CSICPF
Trigger: AAATGGACAAATAGAGCACAAACTAGCTTTCCTGAG...CATGGCCACCAAGGGCCTCTCACCATACGCTTCTCCACTCAACCTTTGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAAGTTTCATGTCCTTaGGCACATGAGTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLQVSCP*AHEFSG
Trigger: TCCTGAGAACTCATGTGCCAAAGGACATGAAACTTG...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCCACCTCCATCATTTCTaGGCCCCCAAGGTAGGCAGC +
Preference number: 5 (lower is better)
Translates to: YNMASGELVCKTKVLTFFHLHHF*APKVGS
Trigger: GCTGCCTACCTTGGGGGCCAAGAAATGATGGAGGTG...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 5 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTGTGCCACTGGGCATCTaGTGCAAACACAAGACTCTG +
Preference number: 5 (lower is better)
Translates to: QPITWRAESWFVRQRFSLVPLGI*CKHKTL
Trigger: CAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCAC...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCCAAGCCACAGAGGGCTaGTGGAGATGCTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTQATEG*WRCLWL
Trigger: CAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTG...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCAAGCCACAGAGGGCTaGTGGAGATGCTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: IAEHSVTLQEVKTFTKTIQATEG*WRCLWL
Trigger: CAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTG...GATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATCAAGCCACAGAGGGCTaGTGGAGATGCTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHQATEG*WRCLWL
Trigger: CAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTG...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCATATGGTGAGAGGCCCTaGGTGGCCATGGACATCAGG +
Preference number: 5 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSYGERP*VAMDIR
Trigger: CCTGATGTCCATGGCCACCAAGGGCCTCTCACCATA...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACTATGGTGAGAGGCCCTaGGTGGCCATGGACATCAGG +
Preference number: 5 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYYGERP*VAMDIR
Trigger: CCTGATGTCCATGGCCACCAAGGGCCTCTCACCATA...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTGTGTCTCTCCAAAGGTaGAGTGGAGAAGCGTATGGT +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSVSLQR*SGEAYG
Trigger: ACCATACGCTTCTCCACTCAACCTTTGGAGAGACAC...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACAGATGTTGTGTCCAATaGTCATGTCTCTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHRCCVQ*SCLFSL
Trigger: GAGACTGAAGAGACATGACAATTGGACACAACATCT...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTCTCAAACTGGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCAGAATCTTCTTGTCTTaGGGAGCCAACGCATGCCCA +
Preference number: 5 (lower is better)
Translates to: LSNWPCLAVTSLLNLAPFRIFLS*GANACP
Trigger: TGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTCT...GAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CAA 90 bp GAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGGTTGTAAGAATCTTCTaGTCTTTGGGAGCCAACGCA +
Preference number: 5 (lower is better)
Translates to: EKSSLWWSVSLQRLSGEAVVRIF*SLGANA
Trigger: TGCGTTGGCTCCCAAAGACAAGAAGATTCTTACAAC...CGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACCTCAGGAAAGCTAGTTaGTGCTCTATTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDLRKAS*CSICPF
Trigger: AAATGGACAAATAGAGCACAAACTAGCTTTCCTGAG...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTACATTCGTTCAATTGTaGGAAAGAGCAGAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTTFVQL*ERAERH
Trigger: GTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGT...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTGTGGCAATTCTGCCATaGGGTGACTCAGACATTCGT +
Preference number: 5 (lower is better)
Translates to: QPITWRAESWFVRQRFSLVAILP*GDSDIR
Trigger: ACGAATGTCTGAGTCACCCAATGGCAGAATTGCCAC...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTCTGATTAGCAAGGACTaGATTGTCTCAGGACACGGT +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSLISKD*IVSGHG
Trigger: ACCGTGTCCTGAGACAATCAAGTCCTTGCTAATCAG...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACAGGCCAATTTACATTTaGGACAAGTCATCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHRPIYI*DKSSFR
Trigger: CCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCT...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAACATCCAAGCCTGCTTaGGGACAGCCCAGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRTSKPA*GQPSAS
Trigger: AGAGGCACTGGGCTGTCCCAAAGCAGGCTTGGATGT...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACAGACTACACTATTTGGCTCATaGATGGTCTTTAATGGAGTT +
Preference number: 5 (lower is better)
Translates to: RPHKPQRACGDAYGWEQTTLFGS*MVFNGV
Trigger: AACTCCATTAAAGACCATCAATGAGCCAAATAGTGT...AGTCTGTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ACATCAGGCCACACAAGCCACAGAGGGCTTGTGGAGATGCTTATGGCTGGGAACACACTATTTGGCTCATaGATGGTCTTTAATGGAGTT +
Preference number: 5 (lower is better)
Translates to: TSGHTSHRGLVEMLMAGNTLFGS*MVFNGV
Trigger: AACTCCATTAAAGACCATCAATGAGCCAAATAGTGT...GTTCCCAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTGTGTGGCCTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTGGAGAACTGCTCAAATaGTACCCTCTCTTGCCCAAC +
Preference number: 5 (lower is better)
Translates to: QPITWRAESWFVRQRFSLGELLK*YPLLPN
Trigger: GTTGGGCAAGAGAGGGTACAATTTGAGCAGTTCTCC...AAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACCAAGCCACAGAGGGCTaGTGGAGATGCTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYQATEG*WRCLWL
Trigger: CAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTG...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATAGAAAAATCAAGCCTTaGGTGGTCCGTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYRKIKP*VVRVSP
Trigger: TGGAGAGACACGGACCACCAAAGGCTTGATTTTTCT...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AGGAACAAACACGGGTGTGGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGAGATGTTGTGTCCAATaGTCATGTCTCTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: RNKHGCGQSSIAEHSVTLRCCVQ*SCLFSL
Trigger: GAGACTGAAGAGACATGACAATTGGACACAACATCT...CAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACCACACCCGTGTTTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGAGATGTTGTGTCCAATaGTCATGTCTCTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQRCCVQ*SCLFSL
Trigger: GAGACTGAAGAGACATGACAATTGGACACAACATCT...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GACATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACCAGACCTCATTCAAGTaGTGCAAATTGTCTCAACAA +
Preference number: 5 (lower is better)
Translates to: DMMPLTPRYLSVSSTNKDQTSFK*CKLSQQ
Trigger: TTGTTGAGACAATTTGCACAACTTGAATGAGGTCTG...GTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGGAGGGATTTCCTATTTaGGACAAGTCATCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQEGFPI*DKSSFR
Trigger: CCTAAAGGATGACTTGTCCAAAATAGGAAATCCCTC...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381090.7
ENST00000403006.6
CDS TCA 90 bp CTCAGGGACTCGCTTCAGCATCTGAAGTGTGAAATAGCTGCCTATTaGATGGCCAATGAGCACAAGTTTCATGTCCTTTGGCACATGAGT +
Preference number: 5 (lower is better)
Translates to: LRDSLQHLKCEIAAY*MANEHKFHVLWHMS
Trigger: ACTCATGTGCCAAAGGACATGAAACTTGTGCTCATTGGCCATTCAATAGGCAGCTATTTCACACTTCAGATGCTGAAGCGAGTCCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp ATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTCTCAAGAGTATAAAGCCTTaGCAAATGGCACATAAAAGG +
Preference number: 5 (lower is better)
Translates to: MPLTPRYLSVSSTNKDTLKSIKP*QMAHKR
Trigger: CCTTTTATGTGCCATTTGCAAAGGCTTTATACTCTT...GAGAGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTGTTGTAAGAATCTTCTaGTCTTTGGGAGCCAACGCA +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSVVRIF*SLGANA
Trigger: TGCGTTGGCTCCCAAAGACAAGAAGATTCTTACAAC...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237822.8
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATCAAGTTTCATGTCCTTaGGCACATGAGTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYQVSCP*AHEFSG
Trigger: TCCTGAGAACTCATGTGCCAAAGGACATGAAACTTG...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTCAAGTTTCATGTCCTTaGGCACATGAGTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSQVSCP*AHEFSG
Trigger: TCCTGAGAACTCATGTGCCAAAGGACATGAAACTTG...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGACATTCGTTCAATTGTaGGAAAGAGCAGAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLTFVQL*ERAERH
Trigger: GTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGT...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCGTGGCAATTCTGCCATaGGGTGACTCAGACATTCGT +
Preference number: 5 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTVAILP*GDSDIR
Trigger: ACGAATGTCTGAGTCACCCAATGGCAGAATTGCCAC...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGGTGGCAATTCTGCCATaGGGTGACTCAGACATTCGT +
Preference number: 5 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWVAILP*GDSDIR
Trigger: ACGAATGTCTGAGTCACCCAATGGCAGAATTGCCAC...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTCTGATTAGCAAGGACTaGATTGTCTCAGGACACGGT +
Preference number: 5 (lower is better)
Translates to: SAYNMASGELVCKTKVLTLISKD*IVSGHG
Trigger: ACCGTGTCCTGAGACAATCAAGTCCTTGCTAATCAG...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp TCAGCCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 5 (lower is better)
Translates to: SAYNMASGELVCKTKVLTMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...AGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGTGCCACTGGGCATCTaGTGCAAACACAAGACTCTG +
Preference number: 5 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWVPLGI*CKHKTL
Trigger: CAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCAC...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCAAATTGTACCCTCTCTaGCCCAACACAGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFKLYPL*PNTEIR
Trigger: CCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATTT...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAAGCCACAGAGGGCTaGTGGAGATGCTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSQATEG*WRCLWL
Trigger: CAGCCATAAGCATCTCCACAAGCCCTCTGTGGCTTG...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACATTCAGAATCAGATGTaGTGTCCAATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: HDAPHPQIPQCLQYKQGHIQNQM*CPIVMS
Trigger: AGACATGACAATTGGACACAACATCTGATTCTGAAT...GTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS TCA 90 bp ATATCGAAACCAGCACAAAAGTGGAGTGGCAATTCTGCCATTGGGTaGCTCAGACATTCGTTCAATTGTTGGAAAGAGCAGAAAGGCACG +
Preference number: 5 (lower is better)
Translates to: ISKPAQKWSGNSAIG*LRHSFNCWKEQKGT
Trigger: CGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTTCGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAAGAATCTTCTTGTCTTaGGGAGCCAACGCATGCCCA +
Preference number: 5 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSRIFLS*GANACP
Trigger: TGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTCT...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237822.8
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp TGCCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCAGGCCAATTTACATTTaGGACAAGTCATCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: CHWASCANTRLCVDHCVPRPIYI*DKSSFR
Trigger: CCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCT...GGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCACTGGCAGTGGGGGCTaGTTCCTCAGGCCAATTTAC +
Preference number: 5 (lower is better)
Translates to: STTTEIRKLTVASYSQLITGSGG*FLRPIY
Trigger: GTAAATTGGCCTGAGGAACAAGCCCCCACTGCCAGT...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATGATGCCCCTCACCCCCAGATACCTCAGTGTCTCCAGTACAAACAAGGACACTACACTATTTGGCTCATaGATGGTCTTTAATGGAGTT +
Preference number: 5 (lower is better)
Translates to: MMPLTPRYLSVSSTNKDTTLFGS*MVFNGV
Trigger: AACTCCATTAAAGACCATCAATGAGCCAAATAGTGT...AGTGTCCTTGTTTGTACTGGAGACACTGAGGTATCTGGGGGTGAGGGGCATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACGGAGAACTGCTCAAATaGTACCCTCTCTTGCCCAAC +
Preference number: 5 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYGELLK*YPLLPN
Trigger: GTTGGGCAAGAGAGGGTACAATTTGAGCAGTTCTCC...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATAGAAAAATCAAGCCTTaGGTGGTCCGTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHRKIKP*VVRVSP
Trigger: TGGAGAGACACGGACCACCAAAGGCTTGATTTTTCT...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTCAACCATCTGACAGTAAACAGACATGATGCCCCTCACCCCCAGATACCTCAGATTCAGAATCAGATGTaGTGTCCAATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: LNHLTVNRHDAPHPQIPQIQNQM*CPIVMS
Trigger: AGACATGACAATTGGACACAACATCTGATTCTGAAT...CTGAGGTATCTGGGGGTGAGGGGCATCATGTCTGTTTACTGTCAGATGGTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS TCA 90 bp GTTGTAAGAATCTTCTTGTCTTTGGGAGCCAACGCATGCCCAGCATaGCTGATAGTCCAAACTGGAAAGCGTCTGTTTGTCAAAGAGTAT +
Preference number: 5 (lower is better)
Translates to: VVRIFLSLGANACPA*LIVQTGKRLFVKEY
Trigger: ATACTCTTTGACAAACAGACGCTTTCCAGTTTGGACTATCAGTCATGCTGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTCTTACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000402479.6
ENST00000403006.6
ENST00000419825.2
ENST00000440866.6
ENST00000541941.5
CDS CCA 90 bp GAACATATCGAAACCAGCACAAAAGTGGAGTGGCAATTCTGCCATTaGGTGACTCAGACATTCGTTCAATTGTTGGAAAGAGCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: EHIETSTKVEWQFCH*VTQTFVQLLERAER
Trigger: CCTTTCTGCTCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTTCGATATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAAGAATCTTCTTGTCTTaGGGAGCCAACGCATGCCCA +
Preference number: 5 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRRIFLS*GANACP
Trigger: TGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTCT...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp CCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCTGTGCTACTCTTGTTGTAAGAATCTTCTaGTCTTTGGGAGCCAACGCA +
Preference number: 5 (lower is better)
Translates to: PCLAVTSLLNLAPFCATLVVRIF*SLGANA
Trigger: TGCGTTGGCTCCCAAAGACAAGAAGATTCTTACAAC...AAGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CAA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTGTTGTAAGAATCTTCTaGTCTTTGGGAGCCAACGCA +
Preference number: 5 (lower is better)
Translates to: PITWRAESWFVRQRFSLSVVRIF*SLGANA
Trigger: TGCGTTGGCTCCCAAAGACAAGAAGATTCTTACAAC...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237822.8
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTCTCAGGAAAGCTAGTTaGTGCTCTATTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSLRKAS*CSICPF
Trigger: AAATGGACAAATAGAGCACAAACTAGCTTTCCTGAG...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCCAAGTTTCATGTCCTTaGGCACATGAGTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTQVSCP*AHEFSG
Trigger: TCCTGAGAACTCATGTGCCAAAGGACATGAAACTTG...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATCAAGTTTCATGTCCTTaGGCACATGAGTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHQVSCP*AHEFSG
Trigger: TCCTGAGAACTCATGTGCCAAAGGACATGAAACTTG...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTAGGCCAATTTACATTTaGGACAAGTCATCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSRPIYI*DKSSFR
Trigger: CCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCT...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGACTGGCAGTGGGGGCTaGTTCCTCAGGCCAATTTAC +
Preference number: 5 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWTGSGG*FLRPIY
Trigger: GTAAATTGGCCTGAGGAACAAGCCCCCACTGCCAGT...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 5 (lower is better)
Translates to: YNMASGELVCKTKVLTFFMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTGTGCCACTGGGCATCTaGTGCAAACACAAGACTCTG +
Preference number: 5 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFVPLGI*CKHKTL
Trigger: CAGAGTCTTGTGTTTGCACAAGATGCCCAGTGGCAC...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAAAATTGTACCCTCTCTaGCCCAACACAGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSKLYPL*PNTEIR
Trigger: CCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATTT...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACAGAAAAATCAAGCCTTaGGTGGTCCGTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYRKIKP*VVRVSP
Trigger: TGGAGAGACACGGACCACCAAAGGCTTGATTTTTCT...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCAGATGTTGTGTCCAATaGTCATGTCTCTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFRCCVQ*SCLFSL
Trigger: GAGACTGAAGAGACATGACAATTGGACACAACATCT...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CCACTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGATTCAGAATCAGATGTaGTGTCCAATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: PLGILCKHKTLCRSLCSLIQNQM*CPIVMS
Trigger: AGACATGACAATTGGACACAACATCTGATTCTGAAT...CAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS GCA 90 bp CATAGAGAACATATCGAAACCAGCACAAAAGTGGAGTGGCAATTCTaGCATTGGGTGACTCAGACATTCGTTCAATTGTTGGAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: HREHIETSTKVEWQF*HWVTQTFVQLLERA
Trigger: TGCTCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTTCGATATGTTCTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CTGGGCATCTTGTGCAAACACAAGACTCTGTGTAGATCACTGTGTTCCCTGAGTAAGAGTATAAAGCCTTaGCAAATGGCACATAAAAGG +
Preference number: 5 (lower is better)
Translates to: LGILCKHKTLCRSLCSLSKSIKP*QMAHKR
Trigger: CCTTTTATGTGCCATTTGCAAAGGCTTTATACTCTT...ACTCAGGGAACACAGTGATCTACACAGAGTCTTGTGTTTGCACAAGATGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237822.8
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp TCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCCTGGAAAGCGTCTGTTaGTCAAAGAGTATAAAGCCT +
Preference number: 5 (lower is better)
Translates to: SIAEHSVTLQEVKTFTKTLESVC*SKSIKP
Trigger: AGGCTTTATACTCTTTGACAAACAGACGCTTTCCAG...GGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp AAGTCCCTCTCAAACTGGCCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCTGGAAAGCGTCTGTTaGTCAAAGAGTATAAAGCCT +
Preference number: 5 (lower is better)
Translates to: KSLSNWPCLAVTSLLNLALESVC*SKSIKP
Trigger: AGGCTTTATACTCTTTGACAAACAGACGCTTTCCAG...AGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGGCCAGTTTGAGAGGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CAA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCCTCAGGAAAGCTAGTTaGTGCTCTATTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFLRKAS*CSICPF
Trigger: AAATGGACAAATAGAGCACAAACTAGCTTTCCTGAG...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATACATTCGTTCAATTGTaGGAAAGAGCAGAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: AEHSVTLQEVKTFTKTIHTFVQL*ERAERH
Trigger: GTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGT...ATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTACATTCGTTCAATTGTaGGAAAGAGCAGAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: PITWRAESWFVRQRFSLSTFVQL*ERAERH
Trigger: GTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGT...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCATGGCGAGCGGAGAGTaGGTTTGTAAGACAAAGGTT +
Preference number: 5 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSMASGE*VCKTKV
Trigger: AACCTTTGTCTTACAAACCAACTCTCCGCTCGCCAT...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAGCGTATACACTATTTGGCTCATaGATGGTCTTTAATGGAGTT +
Preference number: 5 (lower is better)
Translates to: KSSLWWSVSLQRLSGEAYTLFGS*MVFNGV
Trigger: AACTCCATTAAAGACCATCAATGAGCCAAATAGTGT...ATACGCTTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCGCACTTACCAATAAGTaGGCAGCAAATCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: YNMASGELVCKTKVLTFFALTNK*AANQSQ
Trigger: TTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTGC...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCCAGACCTCATTCAAGTaGTGCAAATTGTCTCAACAA +
Preference number: 5 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFQTSFK*CKLSQQ
Trigger: TTGTTGAGACAATTTGCACAACTTGAATGAGGTCTG...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAAAGAGTATAAAGCCTTaGCAAATGGCACATAAAAGG +
Preference number: 5 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGEKSIKP*QMAHKR
Trigger: CCTTTTATGTGCCATTTGCAAAGGCTTTATACTCTT...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp GGTCAAAGCTCAATCGCTGAGCACTCGGTAACTCTGCAGGAAGTTAAAACTTTCAAGAGTATAAAGCCTTaGCAAATGGCACATAAAAGG +
Preference number: 5 (lower is better)
Translates to: GQSSIAEHSVTLQEVKTFKSIKP*QMAHKR
Trigger: CCTTTTATGTGCCATTTGCAAAGGCTTTATACTCTT...GAAAGTTTTAACTTCCTGCAGAGTTACCGAGTGCTCAGCGATTGAGCTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAAGAATCTTCTTGTCTTaGGGAGCCAACGCATGCCCA +
Preference number: 5 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRRIFLS*GANACP
Trigger: TGGGCATGCGTTGGCTCCCAAAGACAAGAAGATTCT...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp AAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGCAGTGGCTCAGGAAAGCTAGTTaGTGCTCTATTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: KHLPTKSSTLTASMYWQWLRKAS*CSICPF
Trigger: AAATGGACAAATAGAGCACAAACTAGCTTTCCTGAG...CCACTGCCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGACATTAGACGTCACATaGATGATCTCAGCCAAGATC +
Preference number: 5 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWTLDVT*MISAKI
Trigger: GATCTTGGCTGAGATCATCAATGTGACGTCTAATGT...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACACATTAGACGTCACATaGATGATCTCAGCCAAGATC +
Preference number: 5 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYTLDVT*MISAKI
Trigger: GATCTTGGCTGAGATCATCAATGTGACGTCTAATGT...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAACACTATTTGGCTCATaGATGGTCTTTAATGGAGTT +
Preference number: 5 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGETLFGS*MVFNGV
Trigger: AACTCCATTAAAGACCATCAATGAGCCAAATAGTGT...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGAGCACTTACCAATAAGTaGGCAGCAAATCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRALTNK*AANQSQ
Trigger: TTGGCTCTGATTTGCTGCCAACTTATTGGTAAGTGC...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTAGAAAAATCAAGCCTTaGGTGGTCCGTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFRKIKP*VVRVSP
Trigger: TGGAGAGACACGGACCACCAAAGGCTTGATTTTTCT...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACAGATGTTGTGTCCAATaGTCATGTCTCTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYRCCVQ*SCLFSL
Trigger: GAGACTGAAGAGACATGACAATTGGACACAACATCT...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GAAGAAAAATCAAGCCTTTGGTGGTCCGTGTCTCTCCAAAGGTTGAGTGGAGAAATTCAGAATCAGATGTaGTGTCCAATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: EEKSSLWWSVSLQRLSGEIQNQM*CPIVMS
Trigger: AGACATGACAATTGGACACAACATCTGATTCTGAAT...TTCTCCACTCAACCTTTGGAGAGACACGGACCACCAAAGGCTTGATTTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp CCTATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTCAGACCTCATTCAAGTaGTGCAAATTGTCTCAACAA +
Preference number: 5 (lower is better)
Translates to: PITWRAESWFVRQRFSLSQTSFK*CKLSQQ
Trigger: TTGTTGAGACAATTTGCACAACTTGAATGAGGTCTG...AGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS TCA 90 bp CCTATTGAATGGCCAATGAGCACAAGTTTCATGTCCTTTGGCACATaGGTTCTCAGGAAAGCTAGTTTGTGCTCTATTTGTCCATTTAGT +
Preference number: 5 (lower is better)
Translates to: PIEWPMSTSFMSFGT*VLRKASLCSICPFS
Trigger: ACTAAATGGACAAATAGAGCACAAACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACATGAAACTTGTGCTCATTGGCCATTCAATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp CCCTGCTTAGCAGTAACATCGCTATTAAATCTTGCTCCCTTCTGTGCTACTCTTAAGAGTATAAAGCCTTaGCAAATGGCACATAAAAGG +
Preference number: 5 (lower is better)
Translates to: PCLAVTSLLNLAPFCATLKSIKP*QMAHKR
Trigger: CCTTTTATGTGCCATTTGCAAAGGCTTTATACTCTT...AAGAGTAGCACAGAAGGGAGCAAGATTTAATAGCGATGTTACTGCTAAGCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS-3UTR CAA 90 bp AGTACAAACAAGGACACTCTCTTACTTCTTCCCAGTACAACCACTGAAATCAGACTGGAAAGCGTCTGTTaGTCAAAGAGTATAAAGCCT +
Preference number: 5 (lower is better)
Translates to: STNKDTLLLLPSTTTEIRLESVC*SKSIKP
Trigger: AGGCTTTATACTCTTTGACAAACAGACGCTTTCCAG...TCTGATTTCAGTGGTTGTACTGGGAAGAAGTAAGAGAGTGTCCTTGTTTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp CTTCTTCCCAGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCTGGAAAGCGTCTGTTaGTCAAAGAGTATAAAGCCT +
Preference number: 5 (lower is better)
Translates to: LLPSTTTEIRKLTVASYSLESVC*SKSIKP
Trigger: AGGCTTTATACTCTTTGACAAACAGACGCTTTCCAG...GGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACTGGGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCGTTGTAAGAATCTTCTaGTCTTTGGGAGCCAACGCA +
Preference number: 5 (lower is better)
Translates to: STTTEIRKLTVASYSQLIVVRIF*SLGANA
Trigger: TGCGTTGGCTCCCAAAGACAAGAAGATTCTTACAAC...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCCTCAGGAAAGCTAGTTaGTGCTCTATTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: YNMASGELVCKTKVLTFFLRKAS*CSICPF
Trigger: AAATGGACAAATAGAGCACAAACTAGCTTTCCTGAG...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp AGTACAACCACTGAAATCAGAAAATTAACAGTGGCATCTTACTCCCAGCTAATCCAAGTTTCATGTCCTTaGGCACATGAGTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: STTTEIRKLTVASYSQLIQVSCP*AHEFSG
Trigger: TCCTGAGAACTCATGTGCCAAAGGACATGAAACTTG...GATTAGCTGGGAGTAAGATGCCACTGTTAATTTTCTGATTTCAGTGGTTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGACTGATTAGCAAGGACTaGATTGTCTCAGGACACGGT +
Preference number: 5 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRLISKD*IVSGHG
Trigger: ACCGTGTCCTGAGACAATCAAGTCCTTGCTAATCAG...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp GTAACTCTGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGAGGCCAATTTACATTTaGGACAAGTCATCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: VTLQEVKTFTKTIHVVDWRPIYI*DKSSFR
Trigger: CCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCT...CCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCAGAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCAAGGCCAATTTACATTTaGGACAAGTCATCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: ITWRAESWFVRQRFSLSSRPIYI*DKSSFR
Trigger: CCTAAAGGATGACTTGTCCAAAATGTAAATTGGCCT...TGAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAAAATTGTACCCTCTCTaGCCCAACACAGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRKLYPL*PNTEIR
Trigger: CCTGATCTCTGTGTTGGGCAAGAGAGGGTACAATTT...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGAGAAAAATCAAGCCTTaGGTGGTCCGTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWRKIKP*VVRVSP
Trigger: TGGAGAGACACGGACCACCAAAGGCTTGATTTTTCT...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TATAACATGGCGAGCGGAGAGTTGGTTTGTAAGACAAAGGTTCTCACTTTCTTCCAGACCTCATTCAAGTaGTGCAAATTGTCTCAACAA +
Preference number: 5 (lower is better)
Translates to: YNMASGELVCKTKVLTFFQTSFK*CKLSQQ
Trigger: TTGTTGAGACAATTTGCACAACTTGAATGAGGTCTG...GAAGAAAGTGAGAACCTTTGTCTTACAAACCAACTCTCCGCTCGCCATGTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp TGCAGGAAGTTAAAACTTTCACAAAGACCATCCATGTGGTTGACTGGGACATACATTCAGAATCAGATGTaGTGTCCAATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: CRKLKLSQRPSMWLTGTYIQNQM*CPIVMS
Trigger: AGACATGACAATTGGACACAACATCTGATTCTGAAT...GTATGTCCCAGTCAACCACATGGATGGTCTTTGTGAAAGTTTTAACTTCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGACTGGAAAGCGTCTGTTaGTCAAAGAGTATAAAGCCT +
Preference number: 5 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRLESVC*SKSIKP
Trigger: AGGCTTTATACTCTTTGACAAACAGACGCTTTCCAG...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000440866.6
ENST00000541941.5
CDS-3UTR CAA 90 bp TCCAATTCAGAATCAGATGTTGTGTCCAATTGTCATGTCTCTTCAGTCTCCTTTCTCAGGAAAGCTAGTTaGTGCTCTATTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: SNSESDVVSNCHVSSVSFLRKAS*CSICPF
Trigger: AAATGGACAAATAGAGCACAAACTAGCTTTCCTGAG...AAAGGAGACTGAAGAGACATGACAATTGGACACAACATCTGATTCTGAATTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGACATTCGTTCAATTGTaGGAAAGAGCAGAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWTFVQL*ERAERH
Trigger: GTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGT...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS-3UTR CAA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGACTCAGGAAAGCTAGTTaGTGCTCTATTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRLRKAS*CSICPF
Trigger: AAATGGACAAATAGAGCACAAACTAGCTTTCCTGAG...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGACAGACCTCATTCAAGTaGTGCAAATTGTCTCAACAA +
Preference number: 5 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRQTSFK*CKLSQQ
Trigger: TTGTTGAGACAATTTGCACAACTTGAATGAGGTCTG...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp ATCTGCAAGTACAAAGAACATTATTTTCCCCTCAACCATCTGACAGTAAACAGAATTCAGAATCAGATGTaGTGTCCAATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: ICKYKEHYFPLNHLTVNRIQNQM*CPIVMS
Trigger: AGACATGACAATTGGACACAACATCTGATTCTGAAT...TCTGTTTACTGTCAGATGGTTGAGGGGAAAATAATGTTCTTTGTACTTGCAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS-3UTR CAA 90 bp AAAATTAAACATTTACCTACTAAGTCTAGTACACTGACTGCCTCCATGTACTGGATTCAGAATCAGATGTaGTGTCCAATTGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: KIKHLPTKSSTLTASMYWIQNQM*CPIVMS
Trigger: AGACATGACAATTGGACACAACATCTGATTCTGAAT...CCAGTACATGGAGGCAGTCAGTGTACTAGACTTAGTAGGTAAATGTTTAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237822.8
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
CDS CAA 90 bp CTCCTTTATGGTTTCGTCATCTCTCTTCACCACCTCCATCATTTCTaGGCCCCCAAGGTAGGCAGCATTAGCGGGAGCTCAGGGACTCGC +
Preference number: 6 (lower is better)
Translates to: LLYGFVISLHHLHHF*APKVGSISGSSGTR
Trigger: GCGAGTCCCTGAGCTCCCGCTAATGCTGCCTACCTTGGGGGCCAAGAAATGATGGAGGTGGTGAAGAGAGATGACGAAACCATAAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440866.6
CDS CAA 90 bp GAGTGGCAATTCTGCCATTGGGTGACTCAGACATTCGTTCAATTGTaGGAAAGAGCAGAAAGGCACGAATTACCGGGAGCTCAGGGACTC +
Preference number: 6 (lower is better)
Translates to: EWQFCHWVTQTFVQL*ERAERHELPGAQGL
Trigger: GAGTCCCTGAGCTCCCGGTAATTCGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS CAA 90 bp GTGGAGTGGCAATTCTGCCATTGGGTGACTCAGACATTCGTTCAATaGTTGGAAAGAGCAGAAAGGCACGAATTACCGGGAGCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: VEWQFCHWVTQTFVQ*LERAERHELPGAQG
Trigger: TCCCTGAGCTCCCGGTAATTCGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS TCA 72 bp TGTCCACCACGAGAGGACAGCAAGAATGCCACCCTCTaGTGTTGTAAGAATCTTCTTGTCTTTGGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: CPPREDSKNATL*CCKNLLVFGSQ
Trigger: TTGGCTCCCAAAGACAAGAAGATTCTTACAACATCAGAGGGTGGCATTCTTGCTGTCCTCTCGTGGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS TCA 72 bp CCAGCACAAAAGTGGAGTGGCAATTCTGCCATTGGGTaGCTCAGACATTCGTTCAATTGTTGGAAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: PAQKWSGNSAIG*LRHSFNCWKEQ
Trigger: CTGCTCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS GCA 72 bp GCTTATATGGCCCCCAAATCCATAGGTGAAACCCTATaGCCAAATGCTATTAAGAGGTGGAGAGGGGTCTTT +
Preference number: 6 (lower is better)
Translates to: AYMAPKSIGETL*PNAIKRWRGVF
Trigger: AAAGACCCCTCTCCACCTCTTAATAGCATTTGGGCATAGGGTTTCACCTATGGATTTGGGGGCCATATAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419825.2
CDS CAA 72 bp TTCTGCCATTGGGTGACTCAGACATTCGTTCAATTGTaGGAAAGAGCAGAAAGGCACGAATTACCGGGAGCT +
Preference number: 6 (lower is better)
Translates to: FCHWVTQTFVQL*ERAERHELPGA
Trigger: AGCTCCCGGTAATTCGTGCCTTTCTGCTCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS CAA 72 bp CGAAACCAGCACAAAAGTGGAGTGGCAATTCTGCCATaGGGTGACTCAGACATTCGTTCAATTGTTGGAAAG +
Preference number: 6 (lower is better)
Translates to: RNQHKSGVAILP*GDSDIRSIVGK
Trigger: CTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS TCA 72 bp TCGCTTCAGCATCTGAAGTGTGAAATAGCTGCCTATTaGATGGCCAATGAGCACAAGTTTCATGTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: SLQHLKCEIAAY*MANEHKFHVLW
Trigger: CCAAAGGACATGAAACTTGTGCTCATTGGCCATTCAATAGGCAGCTATTTCACACTTCAGATGCTGAAGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000440866.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS GCA 72 bp CATATCGAAACCAGCACAAAAGTGGAGTGGCAATTCTaGCATTGGGTGACTCAGACATTCGTTCAATTGTTG +
Preference number: 6 (lower is better)
Translates to: HIETSTKVEWQF*HWVTQTFVQLL
Trigger: CAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTTCGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS CCA 72 bp GAAACCAGCACAAAAGTGGAGTGGCAATTCTGCCATTaGGTGACTCAGACATTCGTTCAATTGTTGGAAAGA +
Preference number: 6 (lower is better)
Translates to: ETSTKVEWQFCH*VTQTFVQLLER
Trigger: TCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS CCA 72 bp CATAGAGAACATATCGAAACCAGCACAAAAGTGGAGTaGCAATTCTGCCATTGGGTGACTCAGACATTCGTT +
Preference number: 6 (lower is better)
Translates to: HREHIETSTKVE*QFCHWVTQTFV
Trigger: AACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTTCGATATGTTCTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2
CDS CAA 90 bp AGAACATATCGAAACCAGCACAAAAGTGGAGTGGCAATTCTGCCATaGGGTGACTCAGACATTCGTTCAATTGTTGGAAAGAGCAGAAAG +
Preference number: 6 (lower is better)
Translates to: RTYRNQHKSGVAILP*GDSDIRSIVGKSRK
Trigger: CTTTCTGCTCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTTCGATATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237822.8
ENST00000381090.7
ENST00000403006.6
ENST00000412261.5
ENST00000432947.1
ENST00000435420.6
ENST00000541941.5
ENST00000619656.4
ENST00000626491.2