RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LCP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000043462

Ensembl transcript IDs: ENST00000046794.10, ENST00000519149.1, ENST00000519594.5, ENST00000520322.1, ENST00000520344.1, ENST00000521416.5, ENST00000522760.5, ENST00000522823.5, ENST00000523369.1

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAGTTGCAGGGCAGCAGGCAGCTCCAAGTGTACAGCATTGCCTTTaGGGACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTT +
Preference number: 1 (lower is better)
Translates to: VVAGQQAAPSVQHCL*GPQIKERSCLRLHV
Trigger: AACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGTCCCCAAAGGCAATGCTGTACACTTGGAGCTGCCTGCTGCCCTGCAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR TCA 90 bp GGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGGCTGATTaGTCTCGTGTTGGCAACAGAGGCAGGAGGACGGTTCATTTGCTC +
Preference number: 1 (lower is better)
Translates to: GFSSVLSVCPLTKAD*SRVGNRGRRTVHLL
Trigger: GAGCAAATGAACCGTCCTCCTGCCTCTGTTGCCAACACGAGATCAATCAGCCTTGGTCAATGGACAAACACTTAGGACTGAACTGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
3UTR TCA 90 bp GGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGGCTaGTTGATCTCGTGTTGGCAACAGAGGCAGGAGGACGGTTCATTT +
Preference number: 1 (lower is better)
Translates to: GGVQFSPKCLSIDQG*LISCWQQRQEDGSF
Trigger: AAATGAACCGTCCTCCTGCCTCTGTTGCCAACACGAGATCAATCAGCCTTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
3UTR TCA 90 bp TTAGTAAGATGTTTATCACTGAGCAGGGTTCTGAGCAACTGTGACTaGTGCACCTGGGGTCATATAGAAGGTCTGTGGCCAAAAGAGGCA +
Preference number: 1 (lower is better)
Translates to: LVRCLSLSRVLSNCD*CTWGHIEGLWPKEA
Trigger: TGCCTCTTTTGGCCACAGACCTTCTATATGACCCCAGGTGCATCAGTCACAGTTGCTCAGAACCCTGCTCAGTGATAAACATCTTACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR TCA 90 bp GAGTTTAATTACCTCAAAGCACTTATACAGCCTGTTTGGGAAGGATaGGGAGAAGGGACTTTATGGCAGAGCTGTCAGGGGGATAACAAG +
Preference number: 1 (lower is better)
Translates to: EFNYLKALIQPVWEG*GEGTLWQSCQGDNK
Trigger: CTTGTTATCCCCCTGACAGCTCTGCCATAAAGTCCCTTCTCCTCATCCTTCCCAAACAGGCTGTATAAGTGCTTTGAGGTAATTAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR TCA 90 bp CTTGTCTCAGGCTTCATGTTTAACATTCCAGAGAGTGACCCTGATTaGCCCAGCTTTAGTAAGATGTTTATCACTGAGCAGGGTTCTGAG +
Preference number: 1 (lower is better)
Translates to: LVSGFMFNIPESDPD*PSFSKMFITEQGSE
Trigger: CTCAGAACCCTGCTCAGTGATAAACATCTTACTAAAGCTGGGTCAATCAGGGTCACTCTCTGGAATGTTAAACATGAAGCCTGAGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CCA 90 bp CAAGCACAACTCAACCAGCTGAAGCATTTATTGAGTCATGTGACTTaGAAGCACATAGTTGGAATAGATTTCAGGGATCCCACTAATTTG +
Preference number: 1 (lower is better)
Translates to: QAQLNQLKHLLSHVT*KHIVGIDFRDPTNL
Trigger: CAAATTAGTGGGATCCCTGAAATCTATTCCAACTATGTGCTTCCAAGTCACATGACTCAATAAATGCTTCAGCTGGTTGAGTTGTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR CCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGAGGGGGCTGTGATGGTTaGTGTGGGTGTGGAGATGTG +
Preference number: 2 (lower is better)
Translates to: TPDKREILSQASCLTFQRGGCDG*CGCGDV
Trigger: CACATCTCCACACCCACACCAACCATCACAGCCCCC...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTGGAGAAGGGACTTTATaGCAGAGCTGTCAGGGGGAT +
Preference number: 2 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAGEGTL*QSCQGD
Trigger: ATCCCCCTGACAGCTCTGCCATAAAGTCCCTTCTCC...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCATATAGAAGGTCTGTaGCCAAAAGAGGCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAHIEGL*PKEARP
Trigger: GGGCCTTGCCTCTTTTGGCCACAGACCTTCTATATG...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR TCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTTTGACCAAGGCTGATTaGTCTCGTGTTGGCAACAGA +
Preference number: 2 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLALTKAD*SRVGNR
Trigger: TCTGTTGCCAACACGAGATCAATCAGCCTTGGTCAA...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGAGTACAGCATTGCCTTTaGGGACCCCAGATAAAAGAG +
Preference number: 2 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERVQHCL*GPQIKE
Trigger: CTCTTTTATCTGGGGTCCCCAAAGGCAATGCTGTAC...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR GCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTAAAAGGAGTTGTCGGTaGTTGAACAGAGAGAGAATG +
Preference number: 2 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAKRSCR*LNRERM
Trigger: CATTCTCTCTCTGTTCAAGCACCGACAACTCCTTTT...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CAA 90 bp TACCTAGCTCACTTGTTTAACACAGAAGAGCCACTAAGTAAATACTaGCTGAATAGCCCGTTGTGTAGACGTGTAAATGAATGCAGGGTT +
Preference number: 2 (lower is better)
Translates to: YLAHLFNTEEPLSKY*LNSPLCRRVNECRV
Trigger: AACCCTGCATTCATTTACACGTCTACACAACGGGCTATTCAGCAAGTATTTACTTAGTGGCTCTTCTGTGTTAAACAAGTGAGCTAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR TCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAATTGACCAAGGCTGATTaGTCTCGTGTTGGCAACAGA +
Preference number: 2 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQLTKAD*SRVGNR
Trigger: TCTGTTGCCAACACGAGATCAATCAGCCTTGGTCAA...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
3UTR-3UTR TCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAATCCATTGACCAAGGCTaGTTGATCTCGTGTTGGCAA +
Preference number: 2 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQSIDQG*LISCWQ
Trigger: TTGCCAACACGAGATCAATCAGCCTTGGTCAATGGA...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
3UTR-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAAAACCCTTGTGTTCATaGGGAGGGGTTCAGTTCAGT +
Preference number: 2 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQKPLCS*GGVQFS
Trigger: ACTGAACTGAACCCCTCCCCATGAACACAAGGGTTT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
3UTR CAA 90 bp GAACCTATGGTGTATGCTATCCTTACTACCTTGTACCTAGCTCACTaGTTTAACACAGAAGAGCCACTAAGTAAATACTTGCTGAATAGC +
Preference number: 2 (lower is better)
Translates to: EPMVYAILTTLYLAH*FNTEEPLSKYLLNS
Trigger: GCTATTCAGCAAGTATTTACTTAGTGGCTCTTCTGTGTTAAACAAGTGAGCTAGGTACAAGGTAGTAAGGATAGCATACACCATAGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CAA 90 bp GCTTACTCGATACTAGAACCTATGGTGTATGCTATCCTTACTACCTaGTACCTAGCTCACTTGTTTAACACAGAAGAGCCACTAAGTAAA +
Preference number: 2 (lower is better)
Translates to: AYSILEPMVYAILTT*YLAHLFNTEEPLSK
Trigger: TTTACTTAGTGGCTCTTCTGTGTTAAACAAGTGAGCTAGGTACAAGGTAGTAAGGATAGCATACACCATAGGTTCTAGTATCGAGTAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CAA 90 bp ACTTGGAAGCACATAGTTGGAATAGATTTCAGGGATCCCACTAATTaGTCCATACTTTTACTGTGTTTTTGTGTGTTGGCCTCGTTGTCT +
Preference number: 2 (lower is better)
Translates to: TWKHIVGIDFRDPTN*SILLLCFCVLASLS
Trigger: AGACAACGAGGCCAACACACAAAAACACAGTAAAAGTATGGACAAATTAGTGGGATCCCTGAAATCTATTCCAACTATGTGCTTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR TCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTTCCATTGACCAAGGCTaGTTGATCTCGTGTTGGCAA +
Preference number: 2 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLSIDQG*LISCWQ
Trigger: TTGCCAACACGAGATCAATCAGCCTTGGTCAATGGA...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGATTGGAAGCACATAGTTaGAATAGATTTCAGGGATCC +
Preference number: 2 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERLEAHS*NRFQGS
Trigger: GGATCCCTGAAATCTATTCCAACTATGTGCTTCCAA...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR GCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGAAGAACCTATGGTGTATaGTATCCTTACTACCTTGTA +
Preference number: 2 (lower is better)
Translates to: TPDKREILSQASCLTFQRRTYGV*YPYYLV
Trigger: TACAAGGTAGTAAGGATAGCATACACCATAGGTTCT...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR GCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGATGTGAACATGACTCATaGACTTTACAAACATTGAAG +
Preference number: 2 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERCEHDS*TLQTLK
Trigger: CTTCAATGTTTGTAAAGTGCATGAGTCATGTTCACA...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CCA 72 bp GGGCAGCAGGCAGCTCCAAGTGTACAGCATTGCCTTTaGGGACCCCAGATAAAAGAGAGATCTTGTCTCAGG +
Preference number: 3 (lower is better)
Translates to: GQQAAPSVQHCL*GPQIKERSCLR
Trigger: CCTGAGACAAGATCTCTCTTTTATCTGGGGTCCCCAAAGGCAATGCTGTACACTTGGAGCTGCCTGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR TCA 72 bp TCAGTCCTAAGTGTTTGTCCATTGACCAAGGCTGATTaGTCTCGTGTTGGCAACAGAGGCAGGAGGACGGTT +
Preference number: 3 (lower is better)
Translates to: SVLSVCPLTKAD*SRVGNRGRRTV
Trigger: AACCGTCCTCCTGCCTCTGTTGCCAACACGAGATCAATCAGCCTTGGTCAATGGACAAACACTTAGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
3UTR TCA 72 bp CAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGGCTaGTTGATCTCGTGTTGGCAACAGAGGCAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: QFSPKCLSIDQG*LISCWQQRQED
Trigger: GTCCTCCTGCCTCTGTTGCCAACACGAGATCAATCAGCCTTGGTCAATGGACAAACACTTAGGACTGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
3UTR TCA 72 bp TGTTTATCACTGAGCAGGGTTCTGAGCAACTGTGACTaGTGCACCTGGGGTCATATAGAAGGTCTGTGGCCA +
Preference number: 3 (lower is better)
Translates to: CLSLSRVLSNCD*CTWGHIEGLWP
Trigger: TGGCCACAGACCTTCTATATGACCCCAGGTGCATCAGTCACAGTTGCTCAGAACCCTGCTCAGTGATAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR CAA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTACAATGCTTTTGGGGTaGGGAGAAGGTTGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLATMLLG*GEGWWG
Trigger: CCCCCACCAACCTTCTCCCAACCCCAAAAGCATTGT...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR TCA 72 bp AAGATGTTTATCACTGAGCAGGGTTCTGAGCAACTGTaGCTGATGCACCTGGGGTCATATAGAAGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: KMFITEQGSEQL*LMHLGSYRRSV
Trigger: CACAGACCTTCTATATGACCCCAGGTGCATCAGTCACAGTTGCTCAGAACCCTGCTCAGTGATAAACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR CAA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGACCCAGCCAAAAGGAGTaGTCGGTGCTTGAACAGAGA +
Preference number: 3 (lower is better)
Translates to: TPDKREILSQASCLTFQRPSQKE*SVLEQR
Trigger: TCTCTGTTCAAGCACCGACAACTCCTTTTGGCTGGG...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR TCA 72 bp GGCTTCATGTTTAACATTCCAGAGAGTGACCCTGATTaGCCCAGCTTTAGTAAGATGTTTATCACTGAGCAG +
Preference number: 3 (lower is better)
Translates to: GFMFNIPESDPD*PSFSKMFITEQ
Trigger: CTGCTCAGTGATAAACATCTTACTAAAGCTGGGTCAATCAGGGTCACTCTCTGGAATGTTAAACATGAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CCA 72 bp CTCAACCAGCTGAAGCATTTATTGAGTCATGTGACTTaGAAGCACATAGTTGGAATAGATTTCAGGGATCCC +
Preference number: 3 (lower is better)
Translates to: LNQLKHLLSHVT*KHIVGIDFRDP
Trigger: GGGATCCCTGAAATCTATTCCAACTATGTGCTTCCAAGTCACATGACTCAATAAATGCTTCAGCTGGTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR CAA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGACTTCCCAGGAAGCCTTaGGTAAAATCTATATCCCTG +
Preference number: 3 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERLPRKP*VKSISL
Trigger: CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAG...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR GCA 72 bp AAGTGGAGCTTACTCGATACTAGAACCTATGGTGTATaGTATCCTTACTACCTTGTACCTAGCTCACTTGTT +
Preference number: 3 (lower is better)
Translates to: KWSLLDTRTYGV*YPYYLVPSSLV
Trigger: AACAAGTGAGCTAGGTACAAGGTAGTAAGGATAGCATACACCATAGGTTCTAGTATCGAGTAAGCTCCACTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR GCA 72 bp AAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATaGTTGAATTTGGCTCAGGTTGAAAGAGAGCTACTA +
Preference number: 3 (lower is better)
Translates to: KLAMGHCLSFSL*LNLAQVERELL
Trigger: TAGTAGCTCTCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR-3UTR CAA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGACTGTGTTTTTGTGTGTaGGCCTCGTTGTCTTCTATT +
Preference number: 3 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERLCFCV*ASLSSI
Trigger: AATAGAAGACAACGAGGCCAACACACAAAAACACAG...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGAGGGGGCAGTGGCGAGTaGTTCCGGCCGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TPDKREILSQASCLTFQRGGSGE*FRPAGG
Trigger: CCCACCAGCCGGCCGGAATCACTCGCCACTGCCCCC...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAACTGCTGGGTTCTTCGTaGTTGGTCTGGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQLLGSS*LVWGGG
Trigger: GCCCCCACCCCAGACCAACCACGAAGAACCCAGCAG...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGCTCCCAGCTACCCTGTaGAACACCCCTGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLLPATL*NTPVGA
Trigger: GGCTCCAACAGGGGTGTTCCACAGGGTAGCTGGGAG...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAAGGTGGCTTCTTCCCTaGCAGGGGGCTGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQRWLLP*QGAAPF
Trigger: GAAAGGAGCAGCCCCCTGCCAGGGAAGAAGCCACCT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATCCCTGGCAGGGGGCTaGTCCTTTCATGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQSLAGG*SFHVFP
Trigger: CGGAAAGACATGAAAGGAGCAGCCCCCTGCCAGGGA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGCTCGGAGGCGTTCTTaGCTCTTCCAACTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQARRRS*LFQLPA
Trigger: AGCTGGGAGTTGGAAGAGCCAAGAACGCCTCCGAGC...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGCTCGTCATTGGAGGGTaGCGGCTCATAATCCGCGTC +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLLVIGG*RLIIRV
Trigger: GACGCGGATTATGAGCCGCCACCCTCCAATGACGAG...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTATTCCGGCCGGCTGGTaGGGGCGGGAGGGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLIPAGW*GREGGH
Trigger: ATGGCCGCCCTCCCGCCCCCACCAGCCGGCCGGAAT...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAATGCTTTGGCACAGGTaGCTTCTTCCCTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQMLWHR*LLPWQG
Trigger: CCCCTGCCAGGGAAGAAGCCACCTGTGCCAAAGCAT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
3UTR CAA 72 bp CTGTGGCCAAAAGAGGCAAGGCCCAGCCAAAAGGAGTaGTCGGTGCTTGAACAGAGAGAGAATGCTAGTCAT +
Preference number: 4 (lower is better)
Translates to: LWPKEARPSQKE*SVLEQRENASH
Trigger: ATGACTAGCATTCTCTCTCTGTTCAAGCACCGACAACTCCTTTTGGCTGGGCCTTGCCTCTTTTGGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAAAGAAGCTCACAAGCTaGGCATGGGCGCTTCACCCA +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQKKLTS*AWALHP
Trigger: TGGGTGAAGCGCCCATGCTCAGCTTGTGAGCTTCTT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGTCCCCATCCATGCTTTaGCACAGGTGGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLSPSML*HRWLLP
Trigger: GGGAAGAAGCCACCTGTGCCAAAGCATGGATGGGGA...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATCCCCATCCATGCTTTaGCACAGGTGGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQSPSML*HRWLLP
Trigger: GGGAAGAAGCCACCTGTGCCAAAGCATGGATGGGGA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGCGTGCTTCTGTCTATTaGAGGAGCAGGGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLRASVY*RSRELC
Trigger: GCAAAGCTCCCTGCTCCTTCAATAGACAGAAGCACG...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAACGAGCCCCATCGATGTaGTACTTCTTCACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQRAPSM*YFFTAF
Trigger: GAAGGCAGTGAAGAAGTACCACATCGATGGGGCTCG...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGAGTGGTTGGTCTGGGGTaGGGGCAGTGGCGAGTGATT +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERVVGLG*GQWRVI
Trigger: AATCACTCGCCACTGCCCCCACCCCAGACCAACCAC...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGATGGGTTCTTCGTGGTTaGTCTGGGGTGGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERWVLRG*SGVGAV
Trigger: CACTGCCCCCACCCCAGACCAACCACGAAGAACCCA...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAAGGCATGTGAGAGGATaGGAGAGGGTTCATGGGACT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQRHVRG*ERVHGT
Trigger: AGTCCCATGAACCCTCTCCCATCCTCTCACATGCCT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGTTCGGCTCTGATAGGTaGTCTGTTGCTAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLFGSDR*SVARAL
Trigger: CAAGGCCCTAGCAACAGACCACCTATCAGAGCCGAA...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATTCGGCTCTGATAGGTaGTCTGTTGCTAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQFGSDR*SVARAL
Trigger: CAAGGCCCTAGCAACAGACCACCTATCAGAGCCGAA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGGGCCGAGGTTTGTTTaGAAGTGGCAAGGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQGPRFV*KWQGEV
Trigger: AACTTCCCCTTGCCACTTCCAAACAAACCTCGGCCC...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCATTCCTCCGCGGGGGATaGGGGCCGAGGTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAFLRGG*GPRFVW
Trigger: CCAAACAAACCTCGGCCCCCATCCCCCGCGGAGGAA...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAAGGAGCAGGGAGCTTTaGCGTTTTGTGGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQRSREL*RFVVSA
Trigger: AGCAGAAACCACAAAACGGCAAAGCTCCCTGCTCCT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGGGGTACCCTGCAGCATaGGTTAATGTGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLGYPAA*VNVHWY
Trigger: ATACCAGTGCACATTAACGCATGCTGCAGGGTACCC...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGGGTACCCTGCAGCATaGGTTAATGTGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQGYPAA*VNVHWY
Trigger: ATACCAGTGCACATTAACGCATGCTGCAGGGTACCC...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATGCTCGGCTATAACTTaGTATGGGTACCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQCSAIT*YGYPAA
Trigger: TGCTGCAGGGTACCCATAGCAAGTTATAGCCGAGCA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCATGGGTTCTTCGTGGTTaGTCTGGGGTGGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAWVLRG*SGVGAV
Trigger: CACTGCCCCCACCCCAGACCAACCACGAAGAACCCA...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACTGCTGGGTTCTTCGTaGTTGGTCTGGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQLLGSS*LVWGGG
Trigger: GCCCCCACCCCAGACCAACCACGAAGAACCCAGCAG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGGTTTCTGCTTCTGCTaGGTTCTTCGTGGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQGFCFC*VLRGWS
Trigger: AGACCAACCACGAAGAACCCAGCAGAAGCAGAAACC...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTGCCTTGAGAGAAGTATaGTGGCAGGGAGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAALREV*WQGGTL
Trigger: CAGAGTGCCTCCCTGCCACCATACTTCTCTCAAGGC...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGGCTATAACTTGCTATaGGTACCCTGCAGCATGCGT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQGYNLL*VPCSMR
Trigger: ACGCATGCTGCAGGGTACCCATAGCAAGTTATAGCC...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAACTGCTGTTACTTTCTaGGAATGCTCCAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQTAVTF*ECSRHV
Trigger: CACATGCCTGGAGCATTCTCAGAAAGTAACAGCAGT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGACTGTTGCTAGGGCCTTaGGAGAAGTATGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPDKREILSQASCLTFQRLLLGP*EKYGGR
Trigger: CCTGCCACCATACTTCTCTCAAGGCCCTAGCAACAG...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGTCCATTGACCAAGGCTaGTTGATCTCGTGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLSIDQG*LISCWQ
Trigger: TTGCCAACACGAGATCAATCAGCCTTGGTCAATGGA...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGGAGAGTGACCCTGATTaGCCCAGCTTTAGTAAGATG +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLESDPD*PSFSKM
Trigger: CATCTTACTAAAGCTGGGTCAATCAGGGTCACTCTC...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGAGTCATCTTCCACGGGTaGCTCTTCCTCCTCATTGGG +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERVIFHG*LFLLIG
Trigger: CCCAATGAGGAGGAAGAGGCACCCGTGGAAGATGAC...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAACCGTTTTGTGGTTTCTaGTTCTGCTGGGTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQPFCGF*FCWVLR
Trigger: ACGAAGAACCCAGCAGAAGCAGAAACCACAAAACGG...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAACTAGGGGAGGTTTCGTaGTTCTGTCTATTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQLGEVS*FCLLKE
Trigger: CTCCTTCAATAGACAGAAGCACGAAACCTCCCCTAG...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCATCCCTGGCAGGGGGCTaGTCCTTTCATGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWASLAGG*SFHVFP
Trigger: CGGAAAGACATGAAAGGAGCAGCCCCCTGCCAGGGA...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTGTGGAACACCCCTGTTaGAGCCGATGTCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAVEHPC*SRCLFW
Trigger: CCAGAAAAGACATCGGCTCCAACAGGGGTGTTCCAC...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGAGGAAACCGCGGGACTTaGGGTTTGCGTGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERGNRGT*GLRVKM
Trigger: CATCTTCACACGCAAACCCCAAGTCCCGCGGTTTCC...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTGAGCTTCCTCGTCATTaGAGGGTGGCGGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAELPRH*RVAAHN
Trigger: ATTATGAGCCGCCACCCTCCAATGACGAGGAAGCTC...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTACATGGAGTTGGAGTTaGGGAAAGGCTTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLATWSWS*GKAWQA
Trigger: TGCCTGCCAAGCCTTTCCCCAACTCCAACTCCATGT...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAAGCTTTGCCGTTTTGTaGTTTCTGCTTCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQSFAVL*FLLLLG
Trigger: ACCCAGCAGAAGCAGAAACCACAAAACGGCAAAGCT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAAGGTGGCTTCTTCCCTaGCAGGGGGCTGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQRWLLP*QGAAPF
Trigger: GAAAGGAGCAGCCCCCTGCCAGGGAAGAAGCCACCT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAACAGGGAGGCACTCTGTaGAAAACTGCTGTTACTTTC +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQQGGTL*KTAVTF
Trigger: GAAAGTAACAGCAGTTTTCCACAGAGTGCCTCCCTG...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTCCAGCCCAGGACCTCTaGGCGAAAGGGCACATTCCT +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLPAQDL*AKGHIP
Trigger: AGGAATGTGCCCTTTCGCTCAGAGGTCCTGGGCTGG...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCACTGTTGCTAGGGCCTTaGGAGAAGTATGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWALLLGP*EKYGGR
Trigger: CCTGCCACCATACTTCTCTCAAGGCCCTAGCAACAG...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGTCTAAGAGCAGCTTCTaGCTCTGGTCGGGTAATATA +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLSKSSF*LWSGNI
Trigger: TATATTACCCGACCAGAGGCAGAAGCTGCTCTTAGA...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATCTAAGAGCAGCTTCTaGCTCTGGTCGGGTAATATA +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQSKSSF*LWSGNI
Trigger: TATATTACCCGACCAGAGGCAGAAGCTGCTCTTAGA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGGAGGACGGTTCATTTaGTCGGCTATAACTTGCTAT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQGGRFI*SAITCY
Trigger: ATAGCAAGTTATAGCCGAGCAAATGAACCGTCCTCC...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCCAAGTGTACAGCATTaGCTTTGGGGACCCCAGATA +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAPSVQH*LWGPQI
Trigger: TATCTGGGGTCCCCAAAGGCAATGCTGTACACTTGG...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCATGGGCGCTTCACCCATaGGCAGAGAAGCTCAAATCC +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAWALHP*AEKLKS
Trigger: GGATTTGAGCTTCTCTGCCCATGGGTGAAGCGCCCA...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGAGCCGGTCGATGTACATaGAGTTGGAGTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERAGRCT*SWSWGK
Trigger: CTTTCCCCAACTCCAACTCCATGTACATCGACCGGC...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAATGCTTTGGCACAGGTaGCTTCTTCCCTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQMLWHR*LLPWQG
Trigger: CCCCTGCCAGGGAAGAAGCCACCTGTGCCAAAGCAT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGCCTTGAGAGAAGTATaGTGGCAGGGAGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAALREV*WQGGTL
Trigger: CAGAGTGCCTCCCTGCCACCATACTTCTCTCAAGGC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAATGTGCACTGGTATCTaGAACCTCGGTTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQMCTGI*NLGFSH
Trigger: ATGGGAAAAACCGAGGTTCCAGATACCAGTGCACAT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATGCGTTAATGTGCACTaGTATCTGGAACCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQCVNVH*YLEPRF
Trigger: AAACCGAGGTTCCAGATACCAGTGCACATTAACGCA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCACTGGGGTGGGGGCAGTaGCTGCATAAAGATCCAAAC +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWALGWGQ*LHKDPN
Trigger: GTTTGGATCTTTATGCAGCCACTGCCCCCACCCCAG...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000521416.5
3UTR CAA 72 bp TCTAAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTaGGTAAAATCTATATCCCTGGACAATGCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SKVLLPRLPRKP*VKSISLDNAFG
Trigger: CCCAAAAGCATTGTCCAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTACTGCTGTTACTTTCTaGGAATGCTCCAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLATAVTF*ECSRHV
Trigger: CACATGCCTGGAGCATTCTCAGAAAGTAACAGCAGT...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTGTGGGTGTGGAGATGTaGAGAAATGCCAACTTAACC +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAVGVEM*RNANLT
Trigger: GGTTAAGTTGGCATTTCTTCACATCTCCACACCCAC...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAACTAATGGCAAGTGTATaGCATAGGAAATTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQLMASV*HRKLAM
Trigger: CATGGCCAATTTCCTATGTCATACACTTGCCATTAG...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGGCAGGATGGAGTTCTaGAGAGCTTCCTCGTCATTG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAGRMEF*RASSSL
Trigger: CAATGACGAGGAAGCTCTGCAGAACTCCATCCTGCC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAGTAAATGGGAGTAGTTaGAGGGCAGCAGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQVNGSS*RAAGSS
Trigger: GGAGCTGCCTGCTGCCCTGCAACTACTCCCATTTAC...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACATTCCTCAGTGCCATaGCTGCTCTCCCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQHSSVP*LLSREE
Trigger: TTCTTCCCGGGAGAGCAGCCATGGCACTGAGGAATG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGACCTCTTCCTCCTCATTaGGGGACTCATAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERPLPPH*GTHSLH
Trigger: ATGGAGACTATGAGTCCCCCAATGAGGAGGAAGAGG...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTTTTCATGTCTTTCCGTaGTCGGTGGTAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAFHVFP*SVVKEA
Trigger: AGCCTCCTTTACCACCGACCACGGAAAGACATGAAA...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAAGGCATGTGAGAGGATaGGAGAGGGTTCATGGGACT +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWARHVRG*ERVHGT
Trigger: AGTCCCATGAACCCTCTCCCATCCTCTCACATGCCT...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTAGGTTTGTTTGGAAGTaGCAAGGGGAAGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLARFVWK*QGEVSA
Trigger: GGCAGAAACTTCCCCTTGCCACTTCCAAACAAACCT...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTAAACCCTTGTGTTCATaGGGAGGGGTTCAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAKPLCS*GGVQFS
Trigger: ACTGAACTGAACCCCTCCCCATGAACACAAGGGTTT...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACGTGCTTCTGTCTATTaGAGGAGCAGGGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQRASVY*RSRELC
Trigger: GCAAAGCTCCCTGCTCCTTCAATAGACAGAAGCACG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGATTGACCAAGGCTGATTaGTCTCGTGTTGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: TPDKREILSQASCLTFQRLTKAD*SRVGNR
Trigger: TCTGTTGCCAACACGAGATCAATCAGCCTTGGTCAA...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTATGAATGCCTCTGACTaGCAGAGGTTTGGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAMNASD*QRFGCK
Trigger: TTTACAGCCAAACCTCTGTCAGTCAGAGGCATTCAT...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGAACTAATGAATGCCTCTaGCTGACAGAGGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TPDKREILSQASCLTFQRTNECL*LTEVWL
Trigger: CAGCCAAACCTCTGTCAGTCAGAGGCATTCATTAGT...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAACACTCTGTGGAAAACTaGTGTTACTTTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQHSVEN*CYFLRM
Trigger: CATTCTCAGAAAGTAACAGCAGTTTTCCACAGAGTG...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAACGCAAGCTCTTTTCTaGAGGCAGCAGAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWATQALF*RQQSEH
Trigger: ATGCTCACTCTGCTGCCTGCAGAAAAGAGCTTGCGT...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521416.5
CDS-3UTR CCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTGCTTGGCAGGCAGGATaGAGTTCTGCAGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLAWQAG*SSAELP
Trigger: AGGAAGCTCTGCAGAACTCCATCCTGCCTGCCAAGC...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGAAGCTTTGCCGTTTTGTaGTTTCTGCTTCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERSFAVL*FLLLLG
Trigger: ACCCAGCAGAAGCAGAAACCACAAAACGGCAAAGCT...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGACAGGGAGGCACTCTGTaGAAAACTGCTGTTACTTTC +
Preference number: 4 (lower is better)
Translates to: TPDKREILSQASCLTFQRQGGTL*KTAVTF
Trigger: GAAAGTAACAGCAGTTTTCCACAGAGTGCCTCCCTG...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTAGCAGCTTCTGCCTCTaGTCGGGTAATATAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLASSFCL*SGNIRN
Trigger: GTTTCTTATATTACCCGACCAGAGGCAGAAGCTGCT...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGGCTATAACTTGCTATaGGTACCCTGCAGCATGCGT +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAGYNLL*VPCSMR
Trigger: ACGCATGCTGCAGGGTACCCATAGCAAGTTATAGCC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCACATATAGAAGGTCTGTaGCCAAAAGAGGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAHIEGL*PKEARP
Trigger: GGGCCTTGCCTCTTTTGGCCACAGACCTTCTATATG...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTCTTGGGGTTTGCGTGTaGAGATGCTCCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLLGVCV*RCSSSL
Trigger: AAGAGAGGAGGAGCATCTTCACACGCAAACCCCAAG...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCATCCATTGACCAAGGCTaGTTGATCTCGTGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWASIDQG*LISCWQ
Trigger: TTGCCAACACGAGATCAATCAGCCTTGGTCAATGGA...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGGAATTTGGCTCAGGTTaGAAGAGAGCTACTAAATTA +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLEFGSG*KRATKL
Trigger: TAATTTAGTAGCTCTCTTTCAACCTGAGCCAAATTC...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAAGGAGCAGGGAGCTTTaGCGTTTTGTGGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQRSREL*RFVVSA
Trigger: AGCAGAAACCACAAAACGGCAAAGCTCCCTGCTCCT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTGGAGATGTGAAGAAATaGCAACTTAACCCCAGATGT +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAGDVKK*QLNPRC
Trigger: ACATCTGGGGTTAAGTTGGCATTTCTTCACATCTCC...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAAGAACCTATGGTGTATaGTATCCTTACTACCTTGTA +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQRTYGV*YPYYLV
Trigger: TACAAGGTAGTAAGGATAGCATACACCATAGGTTCT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAGGTGGGGGCAGTGGCTaGATAAAGATCCAAACGTTA +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQGGGSG*IKIQTL
Trigger: TAACGTTTGGATCTTTATGCAGCCACTGCCCCCACC...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521416.5
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAAAACCCTTGTGTTCATaGGGAGGGGTTCAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAKPLCS*GGVQFS
Trigger: ACTGAACTGAACCCCTCCCCATGAACACAAGGGTTT...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACCTGGACAATGCTTTTaGGGTTGGGAGAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQPGQCF*GWEKVG
Trigger: ACCAACCTTCTCCCAACCCCAAAAGCATTGTCCAGG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTGGAGAAGGGACTTTATaGCAGAGCTGTCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLGEGTL*QSCQGD
Trigger: ATCCCCCTGACAGCTCTGCCATAAAGTCCCTTCTCC...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTGCAAAGCAAGACAAGTaGAGCTTACTCGATACTAGA +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAAKQDK*SLLDTR
Trigger: TCTAGTATCGAGTAAGCTCCACTTGTCTTGCTTTGC...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGTACAGCATTGCCTTTaGGGACCCCAGATAAAAGAG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAVQHCL*GPQIKE
Trigger: CTCTTTTATCTGGGGTCCCCAAAGGCAATGCTGTAC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CAA 72 bp ACTCAACCAGCTGAAGCATTTATTGAGTCATGTGACTaGGAAGCACATAGTTGGAATAGATTTCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: TQPAEAFIESCD*EAHSWNRFQGS
Trigger: GGATCCCTGAAATCTATTCCAACTATGTGCTTCCAAGTCACATGACTCAATAAATGCTTCAGCTGGTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CAA 72 bp TTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTaGAATTTGGCTCAGGTTGAAAGAGAGCTACTAAAT +
Preference number: 4 (lower is better)
Translates to: LAMGHCLSFSLC*NLAQVERELLN
Trigger: ATTTAGTAGCTCTCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGGTAAAGGAGGCTTTTaGATCTTGGGTAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAGKGGF*ILGKCS
Trigger: GGAGCATTTACCCAAGATTCAAAAGCCTCCTTTACC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCATGGCTTAGTAGATCTTaGAGGGAAAGTGTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAWLSRS*RESVGA
Trigger: AGCTCCAACACTTTCCCTTCAAGATCTACTAAGCCA...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGACTTTGTACAACACCATaGGGACATATGGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: TPDKREILSQASCLTFQRLCTTP*GHMDWL
Trigger: CAACCAATCCATATGTCCTCATGGTGTTGTACAAAG...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTGTAGTCAATAATATCTaGCACAGACAGAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAVVNNI*HRQKVL
Trigger: GAGGACTTTCTGTCTGTGTCAGATATTATTGACTAC...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGAGTGGTACTTCTTCACTaGCTTCTCACAGTCCTTATA +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERVVLLH*LLTVLI
Trigger: TATAAGGACTGTGAGAAGGCAGTGAAGAAGTACCAC...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACCGTTTTGTGGTTTCTaGTTCTGCTGGGTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQPFCGF*FCWVLR
Trigger: ACGAAGAACCCAGCAGAAGCAGAAACCACAAAACGG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACTAGGGGAGGTTTCGTaGTTCTGTCTATTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQLGEVS*FCLLKE
Trigger: CTCCTTCAATAGACAGAAGCACGAAACCTCCCCTAG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGGAGGACGGTTCATTTaGTCGGCTATAACTTGCTAT +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAGGRFI*SAITCY
Trigger: ATAGCAAGTTATAGCCGAGCAAATGAACCGTCCTCC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGTTATCCTTTAGCTTATaGTTGAATTTGGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLLSFSL*LNLAQV
Trigger: AACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAA...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACCATTGTCCTCTTCGTaGCTTTCTGTCTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQPLSSS*LSVSSG
Trigger: TCCTGAAGAGACAGAAAGCCACGAAGAGGACAATGG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTGGTTTCTGCTTCTGCTaGGTTCTTCGTGGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLGFCFC*VLRGWS
Trigger: AGACCAACCACGAAGAACCCAGCAGAAGCAGAAACC...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAGAGGCTTTTGAATCTTaGGTAAATGCTCCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQEAFES*VNAPRV
Trigger: CACTCGGGGAGCATTTACCCAAGATTCAAAAGCCTC...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAATTTCATGTCTTTCCGTaGTCGGTGGTAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQFHVFP*SVVKEA
Trigger: AGCCTCCTTTACCACCGACCACGGAAAGACATGAAA...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAAGGTTTGTTTGGAAGTaGCAAGGGGAAGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQRFVWK*QGEVSA
Trigger: GGCAGAAACTTCCCCTTGCCACTTCCAAACAAACCT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATCTTCTATTGTAGACTaGTTCTTCCAGATAATTGGT +
Preference number: 4 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQSSIVD*FFQIIG
Trigger: ACCAATTATCTGGAAGAACCAGTCTACAATAGAAGA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTTATGACATAGGAAATTaGCCATGGGTCACTGCTTAT +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAYDIGN*PWVTAY
Trigger: ATAAGCAGTGACCCATGGCCAATTTCCTATGTCATA...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACTCCCAAAACCTGTCTaGATCTGCTCACTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQLPKPV*ICSLFL
Trigger: GAGGAAAAGTGAGCAGATCCAGACAGGTTTTGGGAG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521416.5
CDS-3UTR TCA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTTCTCTTCGTTCTTGTTaGTTTCCTGACTTAACTTAC +
Preference number: 4 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLASLRSC*FPDLTY
Trigger: GTAAGTTAAGTCAGGAAATCAACAAGAACGAAGAGA...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGTTTCTTTCCTAGTGTaGAGGGTTCTCTATCAAACG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAVSFLV*RVLYQT
Trigger: CGTTTGATAGAGAACCCTTCACACTAGGAAAGAAAC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAGGTAAAGGAGGCTTTTaGATCTTGGGTAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQGKGGF*ILGKCS
Trigger: GGAGCATTTACCCAAGATTCAAAAGCCTCCTTTACC...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAATGGCTTAGTAGATCTTaGAGGGAAAGTGTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQWLSRS*RESVGA
Trigger: AGCTCCAACACTTTCCCTTCAAGATCTACTAAGCCA...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCACTTTGTACAACACCATaGGGACATATGGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWALCTTP*GHMDWL
Trigger: CAACCAATCCATATGTCCTCATGGTGTTGTACAAAG...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR TCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGATTTTGGACCCTAAACTaGGAACTTCTGGTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERFWTLN*ELLVVK
Trigger: CTTAACAACCAGAAGTTCTCAGTTTAGGGTCCAAAA...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGACCTTTAGCTTATGCTTaGATTTGGCTCAGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: TPDKREILSQASCLTFQRPLAYA*IWLRLK
Trigger: TTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGG...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGACACTCTGTGGAAAACTaGTGTTACTTTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: TPDKREILSQASCLTFQRHSVEN*CYFLRM
Trigger: CATTCTCAGAAAGTAACAGCAGTTTTCCACAGAGTG...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAATTGGCCATGGGTCACTaGTTATCCTTTAGCTTATGC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQLAMGH*LSFSLC
Trigger: GCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAA...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGACATCCTGGTCATCATTaGGACTTTCATAATCGTCTT +
Preference number: 4 (lower is better)
Translates to: TPDKREILSQASCLTFQRHPGHH*DFHNRL
Trigger: AAGACGATTATGAAAGTCCCAATGATGACCAGGATG...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTTCATCCTCCCCATCCTaGTCATCATTGGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLSSSPS*SSLGLS
Trigger: TGAAAGTCCCAATGATGACCAGGATGGGGAGGATGA...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAAGCAGCTTCTGCCTCTaGTCGGGTAATATAAGAAAC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQSSFCL*SGNIRN
Trigger: GTTTCTTATATTACCCGACCAGAGGCAGAAGCTGCT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAATGCGTTAATGTGCACTaGTATCTGGAACCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQCVNVH*YLEPRF
Trigger: AAACCGAGGTTCCAGATACCAGTGCACATTAACGCA...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTTGGTTGGTGTGGGTGTaGAGATGTGAAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLWLVWV*RCEEMP
Trigger: TGGCATTTCTTCACATCTCCACACCCACACCAACCA...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGATGTGTTTTTGTGTGTTaGCCTCGTTGTCTTCTATTG +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERCVFVC*PRCLLL
Trigger: CAATAGAAGACAACGAGGCCAACACACAAAAACACA...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CAA 72 bp ATACTAGAACCTATGGTGTATGCTATCCTTACTACCTaGTACCTAGCTCACTTGTTTAACACAGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ILEPMVYAILTT*YLAHLFNTEEP
Trigger: TGGCTCTTCTGTGTTAAACAAGTGAGCTAGGTACAAGGTAGTAAGGATAGCATACACCATAGGTTCTAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGTAGTCAATAATATCTaGCACAGACAGAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAVVNNI*HRQKVL
Trigger: GAGGACTTTCTGTCTGTGTCAGATATTATTGACTAC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAATTTAATCTAAAGTGTTaGTCCCTCGTCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQFNLKC*SLVFPG
Trigger: TCCTGGGAAGACGAGGGAGCAACACTTTAGATTAAA...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGATCGCTACCAAATAGTTaGTTTGAAATCTATCAGGTC +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERSLPNS*FEIYQV
Trigger: GACCTGATAGATTTCAAAGCAACTATTTGGTAGCGA...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAAAAAGGAGTTGTCGGTaGTTGAACAGAGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQKRSCR*LNRERM
Trigger: CATTCTCTCTCTGTTCAAGCACCGACAACTCCTTTT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACTCATCTTCATGTTCTaGCTACAAACATCCATGTCC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQLIFMF*LQTSMS
Trigger: GGACATGGATGTTTGTAGGCAGAACATGAAGATGAG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521416.5
CDS-3UTR CCA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGATTGAGTCATGTGACTTaGAAGCACATAGTTGGAATA +
Preference number: 4 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERLSHVT*KHIVGI
Trigger: TATTCCAACTATGTGCTTCCAAGTCACATGACTCAA...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CAA 72 bp GTGTATGCTATCCTTACTACCTTGTACCTAGCTCACTaGTTTAACACAGAAGAGCCACTAAGTAAATACTTG +
Preference number: 4 (lower is better)
Translates to: VYAILTTLYLAH*FNTEEPLSKYL
Trigger: CAAGTATTTACTTAGTGGCTCTTCTGTGTTAAACAAGTGAGCTAGGTACAAGGTAGTAAGGATAGCATACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR TCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTGTTTCTTTCCTAGTGTaGAGGGTTCTCTATCAAACG +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLVSFLV*RVLYQT
Trigger: CGTTTGATAGAGAACCCTTCACACTAGGAAAGAAAC...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAAGAAATGTGCCATCCTaGTTTATCTTTCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWARNVPS*FIFLRA
Trigger: TGCTCTTAGAAAGATAAACCAGGATGGCACATTTCT...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAATTGGAAGCACATAGTTaGAATAGATTTCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQLEAHS*NRFQGS
Trigger: GGATCCCTGAAATCTATTCCAACTATGTGCTTCCAA...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAATAGGAAATTGGCCATaGGTCACTGCTTATCCTTTA +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQIGNWP*VTAYPL
Trigger: TAAAGGATAAGCAGTGACCCATGGCCAATTTCCTAT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
3UTR CAA 72 bp TCCATACTTTTACTGTGTTTTTGTGTGTTGGCCTCGTaGTCTTCTATTGTAGACTGGTTCTTCCAGATAATT +
Preference number: 4 (lower is better)
Translates to: SILLLCFCVLAS*SSIVDWFFQII
Trigger: AATTATCTGGAAGAACCAGTCTACAATAGAAGACAACGAGGCCAACACACAAAAACACAGTAAAAGTATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCATGTGAACATGACTCATaGACTTTACAAACATTGAAG +
Preference number: 4 (lower is better)
Translates to: LAPNCFCSCVNYCILKWACEHDS*TLQTLK
Trigger: CTTCAATGTTTGTAAAGTGCATGAGTCATGTTCACA...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CCA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAAGAAATGTGCCATCCTaGTTTATCTTTCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQRNVPS*FIFLRA
Trigger: TGCTCTTAGAAAGATAAACCAGGATGGCACATTTCT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR GCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTAGACGTGTAAATGAATaGAGGGTTTTCAGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLRRVNE*RVFSLK
Trigger: TTTAAGGCTGAAAACCCTGCATTCATTTACACGTCT...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR GCA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTTGTGAACATGACTCATaGACTTTACAAACATTGAAG +
Preference number: 4 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLCEHDS*TLQTLK
Trigger: CTTCAATGTTTGTAAAGTGCATGAGTCATGTTCACA...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS CCA 90 bp CCCAGCCCAGGACCTCTGAGCGAAAGGGCACATTCCTCAGTGCCATaGCTGCTCTCCCGGGAAGAAGCTCACAAGCTGAGCATGGGCGCT +
Preference number: 5 (lower is better)
Translates to: PSPGPLSERAHSSVP*LLSREEAHKLSMGA
Trigger: AGCGCCCATGCTCAGCTTGTGAGCTTCTTCCCGGGAGAGCAGCCATGGCACTGAGGAATGTGCCCTTTCGCTCAGAGGTCCTGGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000519594.5
ENST00000522760.5
ENST00000522823.5
CDS CCA 90 bp CTGGCCCTGTGCAGAGCACCTTTTCTGGGCCCTGGGTGGGTGTGCTaGCATCATGTTAGAGCCCCGCTTCACTTGGCTCCATCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LALCRAPFLGPGWVC*HHVRAPLHLAPSWL
Trigger: GAGCCAGGATGGAGCCAAGTGAAGCGGGGCTCTAACATGATGCCAGCACACCCACCCAGGGCCCAGAAAAGGTGCTCTGCACAGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS GCA 90 bp ATGGGCAAGCTGGGGCATCAGCCTTCCATGCAGCAGTGGCGAGCTTaGCTTTGGGCTGCTCGGGCCAGAAAATCCGGAAACGGGCCCTTA +
Preference number: 5 (lower is better)
Translates to: MGKLGHQPSMQQWRA*LWAARARKSGNGPL
Trigger: TAAGGGCCCGTTTCCGGATTTTCTGGCCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGCTGATGCCCCAGCTTGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS GCA 90 bp TGTCTGGCCCTGTGCAGAGCACCTTTTCTGGGCCCTGGGTGGGTGTaGTGGCATCATGTTAGAGCCCCGCTTCACTTGGCTCCATCCTGG +
Preference number: 5 (lower is better)
Translates to: CLALCRAPFLGPGWV*WHHVRAPLHLAPSW
Trigger: CCAGGATGGAGCCAAGTGAAGCGGGGCTCTAACATGATGCCAGCACACCCACCCAGGGCCCAGAAAAGGTGCTCTGCACAGGGCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CCA 90 bp AAGCTGGGGCATCAGCCTTCCATGCAGCAGTGGCGAGCTTGCCTTTaGGCTGCTCGGGCCAGAAAATCCGGAAACGGGCCCTTACCGATG +
Preference number: 5 (lower is better)
Translates to: KLGHQPSMQQWRACL*AARARKSGNGPLPM
Trigger: CATCGGTAAGGGCCCGTTTCCGGATTTTCTGGCCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGCTGATGCCCCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS GCA 90 bp GGGGCATCAGCCTTCCATGCAGCAGTGGCGAGCTTGCCTTTGGGCTaGTCGGGCCAGAAAATCCGGAAACGGGCCCTTACCGATGTACAT +
Preference number: 5 (lower is better)
Translates to: GASAFHAAVASLPLG*SGQKIRKRALTDVH
Trigger: ATGTACATCGGTAAGGGCCCGTTTCCGGATTTTCTGGCCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGCTGATGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CCA 90 bp GCCCTGGGTGGGTGTGCTGGCATCATGTTAGAGCCCCGCTTCACTTaGCTCCATCCTGGCTCCTTATCACAAAGCTGCCCTGGACACTGC +
Preference number: 5 (lower is better)
Translates to: ALGGCAGIMLEPRFT*LHPGSLSQSCPGHC
Trigger: GCAGTGTCCAGGGCAGCTTTGTGATAAGGAGCCAGGATGGAGCCAAGTGAAGCGGGGCTCTAACATGATGCCAGCACACCCACCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS GCA 90 bp CCAGAGCTTTCTGCTACATGGGCAAGCTGGGGCATCAGCCTTCCATaGAGCAGTGGCGAGCTTGCCTTTGGGCTGCTCGGGCCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: PELSATWASWGISLP*SSGELAFGLLGPEN
Trigger: ATTTTCTGGCCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGCTGATGCCCCAGCTTGCCCATGTAGCAGAAAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CCA 90 bp AGAGCTCGGAGGCGTTCTTGGCTCTTCCAACTCCCAGCTACCCTGTaGAACACCCCTGTTGGAGCCGATGTCTTTTCTGGCGTAGCCAGA +
Preference number: 5 (lower is better)
Translates to: RARRRSWLFQLPATL*NTPVGADVFSGVAR
Trigger: TCTGGCTACGCCAGAAAAGACATCGGCTCCAACAGGGGTGTTCCACAGGGTAGCTGGGAGTTGGAAGAGCCAAGAACGCCTCCGAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000522823.5
CDS CCA 90 bp CACCCATGGGCAGAGAAGCTCAAATCCAGAGCTCGGAGGCGTTCTTaGCTCTTCCAACTCCCAGCTACCCTGTGGAACACCCCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: HPWAEKLKSRARRRS*LFQLPATLWNTPVG
Trigger: TCCAACAGGGGTGTTCCACAGGGTAGCTGGGAGTTGGAAGAGCCAAGAACGCCTCCGAGCTCTGGATTTGAGCTTCTCTGCCCATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000522823.5
CDS TCA 90 bp ATTCCTCAGTGCCATGGCTGCTCTCCCGGGAAGAAGCTCACAAGCTaGGCATGGGCGCTTCACCCATGGGCAGAGAAGCTCAAATCCAGA +
Preference number: 5 (lower is better)
Translates to: IPQCHGCSPGKKLTS*AWALHPWAEKLKSR
Trigger: TCTGGATTTGAGCTTCTCTGCCCATGGGTGAAGCGCCCATGCTCAGCTTGTGAGCTTCTTCCCGGGAGAGCAGCCATGGCACTGAGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000519594.5
ENST00000522760.5
ENST00000522823.5
CDS GCA 90 bp GTCATTGGAGGGTGGCGGCTCATAATCCGCGTCATCTTCCACGGGTaGCTCTTCCTCCTCATTGGGGGACTCATAGTCTCCATCATCCTC +
Preference number: 5 (lower is better)
Translates to: VIGGWRLIIRVIFHG*LFLLIGGLIVSIIL
Trigger: GAGGATGATGGAGACTATGAGTCCCCCAATGAGGAGGAAGAGGCACCCGTGGAAGATGACGCGGATTATGAGCCGCCACCCTCCAATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000519594.5
CDS GCA 90 bp GAGTGCATGGCTCCCAAAGCCAAAACTATTTCCTGTCTGGCCCTGTaGAGAGCACCTTTTCTGGGCCCTGGGTGGGTGTGCTGGCATCAT +
Preference number: 5 (lower is better)
Translates to: ECMAPKAKTISCLAL*RAPFLGPGWVCWHH
Trigger: ATGATGCCAGCACACCCACCCAGGGCCCAGAAAAGGTGCTCTGCACAGGGCCAGACAGGAAATAGTTTTGGCTTTGGGAGCCATGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CCA 90 bp CGATGTACATGGAGTTGGAGTTGGGGAAAGGCTTGGCAGGCAGGATaGAGTTCTGCAGAGCTTCCTCGTCATTGGAGGGTGGCGGCTCAT +
Preference number: 5 (lower is better)
Translates to: RCTWSWSWGKAWQAG*SSAELPRHWRVAAH
Trigger: ATGAGCCGCCACCCTCCAATGACGAGGAAGCTCTGCAGAACTCCATCCTGCCTGCCAAGCCTTTCCCCAACTCCAACTCCATGTACATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000519594.5
CDS CCA 90 bp GGGCCAGAAAATCCGGAAACGGGCCCTTACCGATGTACATGGAGTTaGAGTTGGGGAAAGGCTTGGCAGGCAGGATGGAGTTCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: GPENPETGPYRCTWS*SWGKAWQAGWSSAE
Trigger: CTCTGCAGAACTCCATCCTGCCTGCCAAGCCTTTCCCCAACTCCAACTCCATGTACATCGGTAAGGGCCCGTTTCCGGATTTTCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CCA 90 bp CTGCTCGGGCCAGAAAATCCGGAAACGGGCCCTTACCGATGTACATaGAGTTGGAGTTGGGGAAAGGCTTGGCAGGCAGGATGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LLGPENPETGPYRCT*SWSWGKAWQAGWSS
Trigger: AGAACTCCATCCTGCCTGCCAAGCCTTTCCCCAACTCCAACTCCATGTACATCGGTAAGGGCCCGTTTCCGGATTTTCTGGCCCGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CCA 90 bp CCCAGCTACCCTGTGGAACACCCCTGTTGGAGCCGATGTCTTTTCTaGCGTAGCCAGATCCCAGAAAGCAACGGCTTCCTCTGCGAACAA +
Preference number: 5 (lower is better)
Translates to: PSYPVEHPCWSRCLF*RSQIPESNGFLCEQ
Trigger: TTGTTCGCAGAGGAAGCCGTTGCTTTCTGGGATCTGGCTACGCCAGAAAAGACATCGGCTCCAACAGGGGTGTTCCACAGGGTAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522823.5
CDS CCA 90 bp GAGACAGAGAGTGCATGGCTCCCAAAGCCAAAACTATTTCCTGTCTaGCCCTGTGCAGAGCACCTTTTCTGGGCCCTGGGTGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: ETESAWLPKPKLFPV*PCAEHLFWALGGCA
Trigger: AGCACACCCACCCAGGGCCCAGAAAAGGTGCTCTGCACAGGGCCAGACAGGAAATAGTTTTGGCTTTGGGAGCCATGCACTCTCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS GCA 90 bp GAGCCCCGCTTCACTTGGCTCCATCCTGGCTCCTTATCACAAAGCTaGCCTGGACACTGCTGTAAAGGTGCAAGAACAGCCCACACCATA +
Preference number: 5 (lower is better)
Translates to: EPRFTWLHPGSLSQS*PGHCCKGARTAHTI
Trigger: TATGGTGTGGGCTGTTCTTGCACCTTTACAGCAGTGTCCAGGGCAGCTTTGTGATAAGGAGCCAGGATGGAGCCAAGTGAAGCGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CCA 90 bp GTTAAGAAGCCGAGCAGATATCGAGACCCAGAGCTTTCTGCTACATaGGCAAGCTGGGGCATCAGCCTTCCATGCAGCAGTGGCGAGCTT +
Preference number: 5 (lower is better)
Translates to: VKKPSRYRDPELSAT*ASWGISLPCSSGEL
Trigger: AAGCTCGCCACTGCTGCATGGAAGGCTGATGCCCCAGCTTGCCCATGTAGCAGAAAGCTCTGGGTCTCGATATCTGCTCGGCTTCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CCA 90 bp GCTCATAATCCGCGTCATCTTCCACGGGTGCCTCTTCCTCCTCATTaGGGGACTCATAGTCTCCATCATCCTCCCCATCCTGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: AHNPRHLPRVPLPPH*GTHSLHHPPHPGHH
Trigger: ATGATGACCAGGATGGGGAGGATGATGGAGACTATGAGTCCCCCAATGAGGAGGAAGAGGCACCCGTGGAAGATGACGCGGATTATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000519594.5
CDS CCA 90 bp GCCGTTTTGTGGTTTCTGCTTCTGCTGGGTTCTTCGTGGTTGGTCTaGGGTGGGGGCAGTGGCTGCATAAAGATCCAAACGTTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: AVLWFLLLLGSSWLV*GGGSGCIKIQTLGS
Trigger: GCTTCCTAACGTTTGGATCTTTATGCAGCCACTGCCCCCACCCCAGACCAACCACGAAGAACCCAGCAGAAGCAGAAACCACAAAACGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520344.1
ENST00000521416.5
CDS CCA 90 bp TTCTTGGCTCTTCCAACTCCCAGCTACCCTGTGGAACACCCCTGTTaGAGCCGATGTCTTTTCTGGCGTAGCCAGATCCCAGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: FLALPTPSYPVEHPC*SRCLFWRSQIPESN
Trigger: GTTGCTTTCTGGGATCTGGCTACGCCAGAAAAGACATCGGCTCCAACAGGGGTGTTCCACAGGGTAGCTGGGAGTTGGAAGAGCCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522823.5
CDS TCA 90 bp CTGCTCCTTTCATGTCTTTCCGTGGTCGGTGGTAAAGGAGGCTTTTaGATCTTGGGTAAATGCTCCCCGAGTGACCTTCCCGCTGGAATC +
Preference number: 5 (lower is better)
Translates to: LLLSCLSVVGGKGGF*ILGKCSPSDLPAGI
Trigger: GATTCCAGCGGGAAGGTCACTCGGGGAGCATTTACCCAAGATTCAAAAGCCTCCTTTACCACCGACCACGGAAAGACATGAAAGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520344.1
ENST00000521416.5
CDS GCA 90 bp CTATCTGAGCTCCCTGTTCTAGACTCTGCCACGCAAGCTCTTTTCTaGAGGCAGCAGAGTGAGCATGTCACTTTCCTGCTAAGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: LSELPVLDSATQALF*RQQSEHVTFLLSLL
Trigger: TAGGAGGCTTAGCAGGAAAGTGACATGCTCACTCTGCTGCCTGCAGAAAAGAGCTTGCGTGGCAGAGTCTAGAACAGGGAGCTCAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520344.1
CDS GCA 90 bp ACTTGGCTCCATCCTGGCTCCTTATCACAAAGCTGCCCTGGACACTaGTGTAAAGGTGCAAGAACAGCCCACACCATACTCACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: TWLHPGSLSQSCPGH*CKGARTAHTILTKD
Trigger: GTCCTTTGTGAGTATGGTGTGGGCTGTTCTTGCACCTTTACAGCAGTGTCCAGGGCAGCTTTGTGATAAGGAGCCAGGATGGAGCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CCA 90 bp TTTCATGTCTTTCCGTGGTCGGTGGTAAAGGAGGCTTTTGAATCTTaGGTAAATGCTCCCCGAGTGACCTTCCCGCTGGAATCGAGGGCT +
Preference number: 5 (lower is better)
Translates to: FHVFPWSVVKEAFES*VNAPRVTFPLESRA
Trigger: AGCCCTCGATTCCAGCGGGAAGGTCACTCGGGGAGCATTTACCCAAGATTCAAAAGCCTCCTTTACCACCGACCACGGAAAGACATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520344.1
ENST00000521416.5
CDS CCA 90 bp AGGGCCACGTGCAGCCTACCCTCTGTGTTTGCAAATGAAGGTTTATaGGCGCAAAGCCAAGCCTGTTTGTTTGCTCATTGTCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RATCSLPSVFANEGL*AQSQACLFAHCLWL
Trigger: CAGCCACAGACAATGAGCAAACAAACAGGCTTGGCTTTGCGCCCATAAACCTTCATTTGCAAACACAGAGGGTAGGCTGCACGTGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS GCA 90 bp TTGGCAACAGAGGCAGGAGGACGGTTCATTTGCTCGGCTATAACTTaGTATGGGTACCCTGCAGCATGCGTTAATGTGCACTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: LATEAGGRFICSAIT*YGYPAACVNVHWYL
Trigger: CAGATACCAGTGCACATTAACGCATGCTGCAGGGTACCCATAGCAAGTTATAGCCGAGCAAATGAACCGTCCTCCTGCCTCTGTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5
CDS CCA 90 bp CAGATCACCCATAGAGTTGGAGGAGTACTTACGGCACCCGGAGCTTaGGGAACTTCTGGATGTCATTTTCTGTCAGGTTCAAGAAGCGAG +
Preference number: 5 (lower is better)
Translates to: QITHRVGGVLTAPGA*GTSGCHFLSGSRSE
Trigger: CTCGCTTCTTGAACCTGACAGAAAATGACATCCAGAAGTTCCCCAAGCTCCGGGTGCCGTAAGTACTCCTCCAACTCTATGGGTGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519149.1
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAATCGGCACCCGGAGCTaGGGGAACTTCTGGATGTCA +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQIGTRS*GNFWMS
Trigger: TGACATCCAGAAGTTCCCCAAGCTCCGGGTGCCGAT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGGACGACCAGCCCCCATaGTCCTCTTCGTGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLDDQPP*SSSWLS
Trigger: AGAAAGCCACGAAGAGGACAATGGGGGCTGGTCGTC...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS GCA 90 bp CTGATTGATCTCGTGTTGGCAACAGAGGCAGGAGGACGGTTCATTTaGTCGGCTATAACTTGCTATGGGTACCCTGCAGCATGCGTTAAT +
Preference number: 5 (lower is better)
Translates to: LIDLVLATEAGGRFI*SAITCYGYPAACVN
Trigger: ATTAACGCATGCTGCAGGGTACCCATAGCAAGTTATAGCCGAGCAAATGAACCGTCCTCCTGCCTCTGTTGCCAACACGAGATCAATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5
CDS-3UTR CAA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGAGGAAACCGCGGGACTaGGGGTTTGCGTGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLRKPRD*GFACED
Trigger: ATCTTCACACGCAAACCCCAAGTCCCGCGGTTTCCT...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGACAATGCTTTTGGGGTaGGGAGAAGGTTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLTMLLG*GEGWWG
Trigger: CCCCCACCAACCTTCTCCCAACCCCAAAAGCATTGT...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS GCA 90 bp CGGTTCATTTGCTCGGCTATAACTTGCTATGGGTACCCTGCAGCATaGGTTAATGTGCACTGGTATCTGGAACCTCGGTTTTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: RFICSAITCYGYPAA*VNVHWYLEPRFFPS
Trigger: TGATGGGAAAAACCGAGGTTCCAGATACCAGTGCACATTAACGCATGCTGCAGGGTACCCATAGCAAGTTATAGCCGAGCAAATGAACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5
CDS GCA 90 bp GTTCTGTGCCTCCCTTTTAAGGTTCAACTCGGGACTGAAAAATCTTaGGTTTCCTTACACCAGCCGCACTCACTTGCGTGTGAAGATGCT +
Preference number: 5 (lower is better)
Translates to: VLCLPFKVQLGTEKS*VSLHQPHSLACEDA
Trigger: AGCATCTTCACACGCAAGTGAGTGCGGCTGGTGTAAGGAAACGCAAGATTTTTCAGTCCCGAGTTGAACCTTAAAAGGGAGGCACAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522823.5
CDS CCA 90 bp GCTATAACTTGCTATGGGTACCCTGCAGCATGCGTTAATGTGCACTaGTATCTGGAACCTCGGTTTTTCCCATCAATGAGCAGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: AITCYGYPAACVNVH*YLEPRFFPSMSRSG
Trigger: GCCACTTCTGCTCATTGATGGGAAAAACCGAGGTTCCAGATACCAGTGCACATTAACGCATGCTGCAGGGTACCCATAGCAAGTTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5
CDS-3UTR CAA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGTGTGGAACACCCCTGTaGGAGCCGATGTCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLCGTPL*EPMSFL
Trigger: CAGAAAAGACATCGGCTCCAACAGGGGTGTTCCACA...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAGGGAGCTTTGCCGTTTaGTGGTTTCTGCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQGSFAV*WFLLLL
Trigger: CAGCAGAAGCAGAAACCACAAAACGGCAAAGCTCCC...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAAAGGAGCAGGGAGCTTaGCCGTTTTGTGGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQKEQGA*PFCGFC
Trigger: GCAGAAACCACAAAACGGCAAAGCTCCCTGCTCCTT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATTGCTCGGCTATAACTaGCTATGGGTACCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQLLGYN*LWVPCS
Trigger: GCTGCAGGGTACCCATAGCAAGTTATAGCCGAGCAA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS TCA 90 bp ATTGTCTGTGGCTGCTTTTGTGCTCCAGTAGCAGAGTTGAGTAGCTaGGACAGAGAGTGCATGGCTCCCAAAGCCAAAACTATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: IVCGCFCAPVAELSS*DRECMAPKAKTISC
Trigger: ACAGGAAATAGTTTTGGCTTTGGGAGCCATGCACTCTCTGTCTCAGCTACTCAACTCTGCTACTGGAGCACAAAAGCAGCCACAGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CCA 90 bp AGTTGGGCTTGTTTTTGGCAAGAGCATCCAGGTCACCAGCTGGGCTaGATCTGTGACTTCTGTTTTCCAGCTCTTCATGTAACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: SWACFWQEHPGHQLG*ICDFCFPALHVTSV
Trigger: AACAGAAGTTACATGAAGAGCTGGAAAACAGAAGTCACAGATCCAGCCCAGCTGGTGACCTGGATGCTCTTGCCAAAAACAAGCCCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519149.1
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCACGCGGGACTTGGGGTTaGCGTGTGAAGATGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWARGTWG*RVKMLL
Trigger: GAGGAGCATCTTCACACGCAAACCCCAAGTCCCGCG...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATCGTGCTTCTGTCTATaGAAGGAGCAGGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQSCFCL*KEQGAL
Trigger: CAAAGCTCCCTGCTCCTTCAATAGACAGAAGCACGA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGGCTGGAATCGAGGGCTaGTCAGAAAATGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLAGIEG*SENGGF
Trigger: GAAACCACCATTTTCTGACAAGCCCTCGATTCCAGC...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGAGGGGCCGAGGTTTGTTaGGAAGTGGCAAGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: TPDKREILSQASCLTFQRGAEVC*EVARGS
Trigger: ACTTCCCCTTGCCACTTCCAAACAAACCTCGGCCCC...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS GCA 90 bp TGTCAGGTTCAAGAAGCGAGCCCCATCGATGTGGTACTTCTTCACTaGCTTCTCACAGTCCTTATAGTTGAGCTTCTTGAAATAGTCAGC +
Preference number: 5 (lower is better)
Translates to: CQVQEASPIDVVLLH*LLTVLIVELLEIVS
Trigger: GCTGACTATTTCAAGAAGCTCAACTATAAGGACTGTGAGAAGGCAGTGAAGAAGTACCACATCGATGGGGCTCGCTTCTTGAACCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000519594.5
ENST00000522760.5
ENST00000522823.5
CDS-3UTR CAA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAAGCTCGGAGGCGTTCTaGGCTCTTCCAACTCCCAGC +
Preference number: 5 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQSSEAF*ALPTPS
Trigger: GCTGGGAGTTGGAAGAGCCAAGAACGCCTCCGAGCT...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGGGGCCGAGGTTTGTTaGGAAGTGGCAAGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAGAEVC*EVARGS
Trigger: ACTTCCCCTTGCCACTTCCAAACAAACCTCGGCCCC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAGATGGGGGCCGAGGTTaGTTTGGAAGTGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQDGGRG*FGSGKG
Trigger: CCCCTTGCCACTTCCAAACAAACCTCGGCCCCCATC...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAAGGAGGACGGTTCATTaGCTCGGCTATAACTTGCTA +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQRRTVH*LGYNLL
Trigger: TAGCAAGTTATAGCCGAGCAAATGAACCGTCCTCCT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGAAAGGAGCAGGGAGCTTaGCCGTTTTGTGGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: TPDKREILSQASCLTFQRKEQGA*PFCGFC
Trigger: GCAGAAACCACAAAACGGCAAAGCTCCCTGCTCCTT...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAGTCCCCATCCATGCTTaGGCACAGGTGGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQVPIHA*AQVASS
Trigger: GGAAGAAGCCACCTGTGCCAAAGCATGGATGGGGAC...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTGATGGGGGCCGAGGTTaGTTTGGAAGTGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLDGGRG*FGSGKG
Trigger: CCCCTTGCCACTTCCAAACAAACCTCGGCCCCCATC...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGATTGCTCGGCTATAACTaGCTATGGGTACCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERLLGYN*LWVPCS
Trigger: GCTGCAGGGTACCCATAGCAAGTTATAGCCGAGCAA...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAACTTCCCAGGAAGCCTTaGGTAAAATCTATATCCCTG +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQLPRKP*VKSISL
Trigger: CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAG...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS TCA 90 bp TTAGGAAGTAGTAGGATGGAACCTTGCTCCCAGGGTGTTTCTAGATaGCTTAACCACCATAGAATCCATTTACAAAGGGGCGCAGATCTA +
Preference number: 5 (lower is better)
Translates to: LGSSRMEPCSQGVSR*LNHHRIHLQRGADL
Trigger: TAGATCTGCGCCCCTTTGTAAATGGATTCTATGGTGGTTAAGTCATCTAGAAACACCCTGGGAGCAAGGTTCCATCCTACTACTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523369.1
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGGGAGCTTTGCCGTTTaGTGGTTTCTGCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAGSFAV*WFLLLL
Trigger: CAGCAGAAGCAGAAACCACAAAACGGCAAAGCTCCC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCATCTGTTGCTAGGGCCTaGAGAGAAGTATGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWASVARA*REVWWQ
Trigger: CTGCCACCATACTTCTCTCAAGGCCCTAGCAACAGA...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAACCACTAAGTAAATACTaGCTGAATAGCCCGTTGTGT +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQPLSKY*LNSPLC
Trigger: ACACAACGGGCTATTCAGCAAGTATTTACTTAGTGG...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCACCCAGCCAAAAGGAGTaGTCGGTGCTTGAACAGAGA +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAPSQKE*SVLEQR
Trigger: TCTCTGTTCAAGCACCGACAACTCCTTTTGGCTGGG...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAAAGCTTATGCTTGAATTaGGCTCAGGTTGAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQSLCLN*AQVERE
Trigger: CTCTCTTTCAACCTGAGCCAAATTCAAGCATAAGCT...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS GCA 90 bp AGTAGACAAGCCTCTAGGGATCTGACAAACATGTCAGTTGCACTTTaGAGCTTCTTGAGTGCAAAACCTGTCATTCAACGAACATTCAGT +
Preference number: 5 (lower is better)
Translates to: SRQASRDLTNMSVAL*SFLSAKPVIQRTFS
Trigger: ACTGAATGTTCGTTGAATGACAGGTTTTGCACTCAAGAAGCTGCAAAGTGCAACTGACATGTTTGTCAGATCCCTAGAGGCTTGTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520322.1
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCATCGTGCTTCTGTCTATaGAAGGAGCAGGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWASCFCL*KEQGAL
Trigger: CAAAGCTCCCTGCTCCTTCAATAGACAGAAGCACGA...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp TTGTGTTCATGGGGAGGGGTTCAGTTCAGTCCTAAGTGTTTGTCCATTGACCAATCCCAACAAGTAAACTaGACTTTCCTTCTGATAACG +
Preference number: 5 (lower is better)
Translates to: LCSWGGVQFSPKCLSIDQSQQVN*TFLLIT
Trigger: CGTTATCAGAAGGAAAGTCAAGTTTACTTGTTGGGA...TTGGTCAATGGACAAACACTTAGGACTGAACTGAACCCCTCCCCATGAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGAAGGAGGACGGTTCATTaGCTCGGCTATAACTTGCTA +
Preference number: 5 (lower is better)
Translates to: TPDKREILSQASCLTFQRRRTVH*LGYNLL
Trigger: TAGCAAGTTATAGCCGAGCAAATGAACCGTCCTCCT...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTCCCTGGACAATGCTTTaGGGGTTGGGAGAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLPWTML*GLGEGW
Trigger: CCAACCTTCTCCCAACCCCAAAAGCATTGTCCAGGG...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAAGCTGGAATCGAGGGCTaGTCAGAAAATGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQAGIEG*SENGGF
Trigger: GAAACCACCATTTTCTGACAAGCCCTCGATTCCAGC...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGACTTGAAGGGAAAGTGTaGGAGCTCATAGGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: TPDKREILSQASCLTFQRLEGKV*ELIGSS
Trigger: ACTACTTCCTATGAGCTCCAACACTTTCCCTTCAAG...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp AAAGTGTTGCTCCCTCGTCTTCCCAGGAAGCCTTTGGTAAAATCTATATCCCTGACTGAGAACTTCTGGTaGTTAAGGATGAGATTTTGT +
Preference number: 5 (lower is better)
Translates to: KVLLPRLPRKPLVKSISLTENFW*LRMRFC
Trigger: ACAAAATCTCATCCTTAACAACCAGAAGTTCTCAGT...CAGGGATATAGATTTTACCAAAGGCTTCCTGGGAAGACGAGGGAGCAACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTTTGCTGAATAGCCCGTaGTGTAGACGTGTAAATGAA +
Preference number: 5 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLALLNSP*CRRVNE
Trigger: TTCATTTACACGTCTACACAACGGGCTATTCAGCAA...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp AGGAAATTGGCCATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTGCTATCCTTACTACCTaGTACCTAGCTCACTTGTTT +
Preference number: 5 (lower is better)
Translates to: RKLAMGHCLSFSLCLNLAAILTT*YLAHLF
Trigger: AAACAAGTGAGCTAGGTACAAGGTAGTAAGGATAGC...AGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCATGGCCAATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAAGGAGTTGTCGGTGCTaGAACAGAGAGAGAATGCTA +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWARSCRC*NRERML
Trigger: TAGCATTCTCTCTCTGTTCAAGCACCGACAACTCCT...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGAACTTTTACTGTGTTTTaGTGTGTTGGCCTCGTTGTC +
Preference number: 5 (lower is better)
Translates to: TPDKREILSQASCLTFQRTFTVF*CVGLVV
Trigger: GACAACGAGGCCAACACACAAAAACACAGTAAAAGT...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp TATTACAGTGCACTACTAGACTTCAAGTGTGAACATGACTCATGCACTTTACAACTTGAAGGGAAAGTGTaGGAGCTCATAGGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: YYSALLDFKCEHDSCTLQLEGKV*ELIGSS
Trigger: ACTACTTCCTATGAGCTCCAACACTTTCCCTTCAAG...TTGTAAAGTGCATGAGTCATGTTCACACTTGAAGTCTAGTAGTGCACTGTAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS-3UTR CAA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGAAAGCCTCTTAAATTATaGCTGCTGAGAAAACGAGGT +
Preference number: 5 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERKPLKL*LLRKRG
Trigger: ACCTCGTTTTCTCAGCAGCAATAATTTAAGAGGCTT...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGATTAAACTCCCAAGTTTaGGACCCTAAACTGAGAACT +
Preference number: 5 (lower is better)
Translates to: TPDKREILSQASCLTFQRLNSQV*DPKLRT
Trigger: AGTTCTCAGTTTAGGGTCCAAAACTTGGGAGTTTAA...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp ATGGGTCACTGCTTATCCTTTAGCTTATGCTTGAATTTGGCTCAGGTTGAAAGAATTGAGTCATGTGACTaGGAAGCACATAGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: MGHCLSFSLCLNLAQVERIESCD*EAHSWN
Trigger: ATTCCAACTATGTGCTTCCAAGTCACATGACTCAAT...TCTTTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGATAAGCAGTGACCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCACAGCTGAAGCATTTATaGAGTCATGTGACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAQLKHL*SHVTWK
Trigger: CTTCCAAGTCACATGACTCAATAAATGCTTCAGCTG...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp ACCCCAGATAAAAGAGAGATCTTGTCTCAGGCTTCATGTTTAACATTCCAGAGATCCTTTAGCTTATGCTaGAATTTGGCTCAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: TPDKREILSQASCLTFQRSFSLC*NLAQVE
Trigger: TTCAACCTGAGCCAAATTCAAGCATAAGCTAAAGGA...TCTCTGGAATGTTAAACATGAAGCCTGAGACAAGATCTCTCTTTTATCTGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCACAGAGACGCCAAAAATaGTTGCTAATAAAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWAQRRQK*LLIKVV
Trigger: CACAACTTTTATTAGCAACAATTTTTGGCGTCTCTG...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp CTTGCCCCAAATTGTTTCTGTAGCTGTGTAAACTACTGTATTTTGAAATGGGCAGATAAAAGAGAGATCTaGTCTCAGGCTTCATGTTTA +
Preference number: 5 (lower is better)
Translates to: LAPNCFCSCVNYCILKWADKREI*SQASCL
Trigger: TAAACATGAAGCCTGAGACAAGATCTCTCTTTTATC...TGCCCATTTCAAAATACAGTAGTTTACACAGCTACAGAAACAATTTGGGGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTAGGGATCCCACTAATTaGTCCATACTTTTACTGTGT +
Preference number: 5 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLRDPTN*SILLLC
Trigger: ACACAGTAAAAGTATGGACAAATTAGTGGGATCCCT...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS-3UTR CAA 90 bp AACCTAGACCCACGATACACCAAAGTCTCATCCCTAAATTTAAAATGTTTTCTTTACCAAATAGTTGCTTaGAAATCTATCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: NLDPRYTKVSSLNLKCFLYQIVA*KSIRSF
Trigger: GAAGGACCTGATAGATTTCAAAGCAACTATTTGGTA...AAGAAAACATTTTAAATTTAGGGATGAGACTTTGGTGTATCGTGGGTCTAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS CCA 72 bp TCTGCTTCTGCTGGGTTCTTCGTGGTTGGTCTGGGGTaGGGGCAGTGGCGAGTGATTCCGGCCGGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: SASAGFFVVGLG*GQWRVIPAGWW
Trigger: CCACCAGCCGGCCGGAATCACTCGCCACTGCCCCCACCCCAGACCAACCACGAAGAACCCAGCAGAAGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000046794.10
CDS CAA 90 bp CATGGGCAAGCTGGGGCATCAGCCTTCCATGCAGCAGTGGCGAGCTaGCCTTTGGGCTGCTCGGGCCAGAAAATCCGGAAACGGGCCCTT +
Preference number: 6 (lower is better)
Translates to: HGQAGASAFHAAVAS*PLGCSGQKIRKRAL
Trigger: AAGGGCCCGTTTCCGGATTTTCTGGCCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGCTGATGCCCCAGCTTGCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS GCA 72 bp GCCTTCCATGCAGCAGTGGCGAGCTTGCCTTTGGGCTaGTCGGGCCAGAAAATCCGGAAACGGGCCCTTACC +
Preference number: 6 (lower is better)
Translates to: AFHAAVASLPLG*SGQKIRKRALT
Trigger: GGTAAGGGCCCGTTTCCGGATTTTCTGGCCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS GCA 72 bp TCTGCTACATGGGCAAGCTGGGGCATCAGCCTTCCATaGAGCAGTGGCGAGCTTGCCTTTGGGCTGCTCGGG +
Preference number: 6 (lower is better)
Translates to: SATWASWGISLP*SSGELAFGLLG
Trigger: CCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGCTGATGCCCCAGCTTGCCCATGTAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CCA 72 bp CATCAGCCTTCCATGCAGCAGTGGCGAGCTTGCCTTTaGGCTGCTCGGGCCAGAAAATCCGGAAACGGGCCC +
Preference number: 6 (lower is better)
Translates to: HQPSMQQWRACL*AARARKSGNGP
Trigger: GGGCCCGTTTCCGGATTTTCTGGCCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CAA 72 bp GCATCAGCCTTCCATGCAGCAGTGGCGAGCTTGCCTTaGGGCTGCTCGGGCCAGAAAATCCGGAAACGGGCC +
Preference number: 6 (lower is better)
Translates to: ASAFHAAVASLP*GCSGQKIRKRA
Trigger: GGCCCGTTTCCGGATTTTCTGGCCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGCTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CAA 90 bp CAAGCTGGGGCATCAGCCTTCCATGCAGCAGTGGCGAGCTTGCCTTaGGGCTGCTCGGGCCAGAAAATCCGGAAACGGGCCCTTACCGAT +
Preference number: 6 (lower is better)
Translates to: QAGASAFHAAVASLP*GCSGQKIRKRALTD
Trigger: ATCGGTAAGGGCCCGTTTCCGGATTTTCTGGCCCGAGCAGCCCAAAGGCAAGCTCGCCACTGCTGCATGGAAGGCTGATGCCCCAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS TCA 72 bp TGCCATGGCTGCTCTCCCGGGAAGAAGCTCACAAGCTaGGCATGGGCGCTTCACCCATGGGCAGAGAAGCTC +
Preference number: 6 (lower is better)
Translates to: CHGCSPGKKLTS*AWALHPWAEKL
Trigger: GAGCTTCTCTGCCCATGGGTGAAGCGCCCATGCTCAGCTTGTGAGCTTCTTCCCGGGAGAGCAGCCATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000519594.5
ENST00000522760.5
ENST00000522823.5
CDS CAA 90 bp GGCCCTGGGTGGGTGTGCTGGCATCATGTTAGAGCCCCGCTTCACTaGGCTCCATCCTGGCTCCTTATCACAAAGCTGCCCTGGACACTG +
Preference number: 6 (lower is better)
Translates to: GPGWVCWHHVRAPLH*APSWLLITKLPWTL
Trigger: CAGTGTCCAGGGCAGCTTTGTGATAAGGAGCCAGGATGGAGCCAAGTGAAGCGGGGCTCTAACATGATGCCAGCACACCCACCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS GCA 72 bp GGGTGGCGGCTCATAATCCGCGTCATCTTCCACGGGTaGCTCTTCCTCCTCATTGGGGGACTCATAGTCTCC +
Preference number: 6 (lower is better)
Translates to: GWRLIIRVIFHG*LFLLIGGLIVS
Trigger: GGAGACTATGAGTCCCCCAATGAGGAGGAAGAGGCACCCGTGGAAGATGACGCGGATTATGAGCCGCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000519594.5
CDS GCA 72 bp CTGTGCAGAGCACCTTTTCTGGGCCCTGGGTGGGTGTaGTGGCATCATGTTAGAGCCCCGCTTCACTTGGCT +
Preference number: 6 (lower is better)
Translates to: LCRAPFLGPGWV*WHHVRAPLHLA
Trigger: AGCCAAGTGAAGCGGGGCTCTAACATGATGCCAGCACACCCACCCAGGGCCCAGAAAAGGTGCTCTGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CCA 72 bp GGACCTCTGAGCGAAAGGGCACATTCCTCAGTGCCATaGCTGCTCTCCCGGGAAGAAGCTCACAAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: GPLSERAHSSVP*LLSREEAHKLS
Trigger: GCTCAGCTTGTGAGCTTCTTCCCGGGAGAGCAGCCATGGCACTGAGGAATGTGCCCTTTCGCTCAGAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000519594.5
ENST00000522760.5
ENST00000522823.5
CDS CCA 72 bp TGCAGAGCACCTTTTCTGGGCCCTGGGTGGGTGTGCTaGCATCATGTTAGAGCCCCGCTTCACTTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: CRAPFLGPGWVC*HHVRAPLHLAP
Trigger: TGGAGCCAAGTGAAGCGGGGCTCTAACATGATGCCAGCACACCCACCCAGGGCCCAGAAAAGGTGCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CAA 90 bp TCACCCATGGGCAGAGAAGCTCAAATCCAGAGCTCGGAGGCGTTCTaGGCTCTTCCAACTCCCAGCTACCCTGTGGAACACCCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: SPMGREAQIQSSEAF*ALPTPSYPVEHPCW
Trigger: CCAACAGGGGTGTTCCACAGGGTAGCTGGGAGTTGGAAGAGCCAAGAACGCCTCCGAGCTCTGGATTTGAGCTTCTCTGCCCATGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000522823.5
CDS GCA 72 bp GCTCCCAAAGCCAAAACTATTTCCTGTCTGGCCCTGTaGAGAGCACCTTTTCTGGGCCCTGGGTGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: APKAKTISCLAL*RAPFLGPGWVC
Trigger: GCACACCCACCCAGGGCCCAGAAAAGGTGCTCTGCACAGGGCCAGACAGGAAATAGTTTTGGCTTTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CCA 72 bp CCGCGTCATCTTCCACGGGTGCCTCTTCCTCCTCATTaGGGGACTCATAGTCTCCATCATCCTCCCCATCCT +
Preference number: 6 (lower is better)
Translates to: PRHLPRVPLPPH*GTHSLHHPPHP
Trigger: AGGATGGGGAGGATGATGGAGACTATGAGTCCCCCAATGAGGAGGAAGAGGCACCCGTGGAAGATGACGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000519594.5
CDS CCA 72 bp GATGGAGTTCTGCAGAGCTTCCTCGTCATTGGAGGGTaGCGGCTCATAATCCGCGTCATCTTCCACGGGTGC +
Preference number: 6 (lower is better)
Translates to: DGVLQSFLVIGG*RLIIRVIFHGC
Trigger: GCACCCGTGGAAGATGACGCGGATTATGAGCCGCCACCCTCCAATGACGAGGAAGCTCTGCAGAACTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000519594.5
CDS CCA 72 bp GCAGAGAAGCTCAAATCCAGAGCTCGGAGGCGTTCTTaGCTCTTCCAACTCCCAGCTACCCTGTGGAACACC +
Preference number: 6 (lower is better)
Translates to: AEKLKSRARRRS*LFQLPATLWNT
Trigger: GGTGTTCCACAGGGTAGCTGGGAGTTGGAAGAGCCAAGAACGCCTCCGAGCTCTGGATTTGAGCTTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000522823.5
CDS CCA 72 bp CCGAGCAGATATCGAGACCCAGAGCTTTCTGCTACATaGGCAAGCTGGGGCATCAGCCTTCCATGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: PSRYRDPELSAT*ASWGISLPCSS
Trigger: ACTGCTGCATGGAAGGCTGATGCCCCAGCTTGCCCATGTAGCAGAAAGCTCTGGGTCTCGATATCTGCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CCA 72 bp CTTCCAACTCCCAGCTACCCTGTGGAACACCCCTGTTaGAGCCGATGTCTTTTCTGGCGTAGCCAGATCCCA +
Preference number: 6 (lower is better)
Translates to: LPTPSYPVEHPC*SRCLFWRSQIP
Trigger: TGGGATCTGGCTACGCCAGAAAAGACATCGGCTCCAACAGGGGTGTTCCACAGGGTAGCTGGGAGTTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519149.1
ENST00000522823.5
CDS CCA 72 bp CCTGTGGAACACCCCTGTTGGAGCCGATGTCTTTTCTaGCGTAGCCAGATCCCAGAAAGCAACGGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: PVEHPCWSRCLF*RSQIPESNGFL
Trigger: GAGGAAGCCGTTGCTTTCTGGGATCTGGCTACGCCAGAAAAGACATCGGCTCCAACAGGGGTGTTCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522823.5
CDS CCA 72 bp GGGTGTGCTGGCATCATGTTAGAGCCCCGCTTCACTTaGCTCCATCCTGGCTCCTTATCACAAAGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: GCAGIMLEPRFT*LHPGSLSQSCP
Trigger: AGGGCAGCTTTGTGATAAGGAGCCAGGATGGAGCCAAGTGAAGCGGGGCTCTAACATGATGCCAGCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CAA 72 bp GGCAGAGAAGCTCAAATCCAGAGCTCGGAGGCGTTCTaGGCTCTTCCAACTCCCAGCTACCCTGTGGAACAC +
Preference number: 6 (lower is better)
Translates to: GREAQIQSSEAF*ALPTPSYPVEH
Trigger: GTGTTCCACAGGGTAGCTGGGAGTTGGAAGAGCCAAGAACGCCTCCGAGCTCTGGATTTGAGCTTCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000522823.5
CDS CAA 72 bp TGGGTGTGCTGGCATCATGTTAGAGCCCCGCTTCACTaGGCTCCATCCTGGCTCCTTATCACAAAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: WVCWHHVRAPLH*APSWLLITKLP
Trigger: GGGCAGCTTTGTGATAAGGAGCCAGGATGGAGCCAAGTGAAGCGGGGCTCTAACATGATGCCAGCACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CCA 72 bp AATCCGGAAACGGGCCCTTACCGATGTACATGGAGTTaGAGTTGGGGAAAGGCTTGGCAGGCAGGATGGAGT +
Preference number: 6 (lower is better)
Translates to: NPETGPYRCTWS*SWGKAWQAGWS
Trigger: ACTCCATCCTGCCTGCCAAGCCTTTCCCCAACTCCAACTCCATGTACATCGGTAAGGGCCCGTTTCCGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519594.5
CDS CCA 72 bp AGTGCATGGCTCCCAAAGCCAAAACTATTTCCTGTCTaGCCCTGTGCAGAGCACCTTTTCTGGGCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: SAWLPKPKLFPV*PCAEHLFWALG
Trigger: ACCCAGGGCCCAGAAAAGGTGCTCTGCACAGGGCCAGACAGGAAATAGTTTTGGCTTTGGGAGCCATGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS GCA 72 bp TTGAAGGAGCAGGGAGCTTTGCCGTTTTGTGGTTTCTaGTTCTGCTGGGTTCTTCGTGGTTGGTCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: LKEQGALPFCGF*FCWVLRGWSGV
Trigger: CACCCCAGACCAACCACGAAGAACCCAGCAGAAGCAGAAACCACAAAACGGCAAAGCTCCCTGCTCCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS GCA 72 bp CTCGTGTTGGCAACAGAGGCAGGAGGACGGTTCATTTaGTCGGCTATAACTTGCTATGGGTACCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: LVLATEAGGRFI*SAITCYGYPAA
Trigger: TGCTGCAGGGTACCCATAGCAAGTTATAGCCGAGCAAATGAACCGTCCTCCTGCCTCTGTTGCCAACACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5
CDS CCA 72 bp TCCCTGGCAGGGGGCTGCTCCTTTCATGTCTTTCCGTaGTCGGTGGTAAAGGAGGCTTTTGAATCTTGGGTA +
Preference number: 6 (lower is better)
Translates to: SLAGGCSFHVFP*SVVKEAFESWV
Trigger: TACCCAAGATTCAAAAGCCTCCTTTACCACCGACCACGGAAAGACATGAAAGGAGCAGCCCCCTGCCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520344.1
ENST00000521416.5
CDS CCA 72 bp TGGCAAGGGGAAGTTTCTGCCTTCGGCTCTGATAGGTaGTCTGTTGCTAGGGCCTTGAGAGAAGTATGGTGG +
Preference number: 6 (lower is better)
Translates to: WQGEVSAFGSDR*SVARALREVWW
Trigger: CCACCATACTTCTCTCAAGGCCCTAGCAACAGACCACCTATCAGAGCCGAAGGCAGAAACTTCCCCTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS CAA 72 bp TCTCGTGTTGGCAACAGAGGCAGGAGGACGGTTCATTaGCTCGGCTATAACTTGCTATGGGTACCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SRVGNRGRRTVH*LGYNLLWVPCS
Trigger: GCTGCAGGGTACCCATAGCAAGTTATAGCCGAGCAAATGAACCGTCCTCCTGCCTCTGTTGCCAACACGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5
CDS CAA 72 bp TGCTCCCCGAGTGACCTTCCCGCTGGAATCGAGGGCTaGTCAGAAAATGGTGGTTTCTTTCGCTTTGCCGTT +
Preference number: 6 (lower is better)
Translates to: CSPSDLPAGIEG*SENGGFFRFAV
Trigger: AACGGCAAAGCGAAAGAAACCACCATTTTCTGACAAGCCCTCGATTCCAGCGGGAAGGTCACTCGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520344.1
CDS CAA 72 bp GCCCACACCATACTCACAAAGGACGACCAGCCCCCATaGTCCTCTTCGTGGCTTTCTGTCTCTTCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: AHTILTKDDQPP*SSSWLSVSSGN
Trigger: GTTTCCTGAAGAGACAGAAAGCCACGAAGAGGACAATGGGGGCTGGTCGTCCTTTGTGAGTATGGTGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS GCA 72 bp GAGGCAGGAGGACGGTTCATTTGCTCGGCTATAACTTaGTATGGGTACCCTGCAGCATGCGTTAATGTGCAC +
Preference number: 6 (lower is better)
Translates to: EAGGRFICSAIT*YGYPAACVNVH
Trigger: GTGCACATTAACGCATGCTGCAGGGTACCCATAGCAAGTTATAGCCGAGCAAATGAACCGTCCTCCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5
CDS GCA 72 bp TTCACTTGGCTCCATCCTGGCTCCTTATCACAAAGCTaGCCTGGACACTGCTGTAAAGGTGCAAGAACAGCC +
Preference number: 6 (lower is better)
Translates to: FTWLHPGSLSQS*PGHCCKGARTA
Trigger: GGCTGTTCTTGCACCTTTACAGCAGTGTCCAGGGCAGCTTTGTGATAAGGAGCCAGGATGGAGCCAAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CCA 72 bp TTTCCGTGGTCGGTGGTAAAGGAGGCTTTTGAATCTTaGGTAAATGCTCCCCGAGTGACCTTCCCGCTGGAA +
Preference number: 6 (lower is better)
Translates to: FPWSVVKEAFES*VNAPRVTFPLE
Trigger: TTCCAGCGGGAAGGTCACTCGGGGAGCATTTACCCAAGATTCAAAAGCCTCCTTTACCACCGACCACGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520344.1
ENST00000521416.5
CDS CCA 72 bp AGGAGTACTTACGGCACCCGGAGCTTGGGGAACTTCTaGATGTCATTTTCTGTCAGGTTCAAGAAGCGAGCC +
Preference number: 6 (lower is better)
Translates to: RSTYGTRSLGNF*MSFSVRFKKRA
Trigger: GGCTCGCTTCTTGAACCTGACAGAAAATGACATCCAGAAGTTCCCCAAGCTCCGGGTGCCGTAAGTACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519149.1
CDS CCA 72 bp GGGCTTGTTTTTGGCAAGAGCATCCAGGTCACCAGCTaGGCTGGATCTGTGACTTCTGTTTTCCAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: GLVFGKSIQVTS*AGSVTSVFQLF
Trigger: GAAGAGCTGGAAAACAGAAGTCACAGATCCAGCCCAGCTGGTGACCTGGATGCTCTTGCCAAAAACAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519149.1
CDS CAA 72 bp TGCTCCCCGAGTGACCTTCCCGCTGGAATCGAGGGCTaGTCAGAAAATGGTGGTTTCTTTCCTAGTGTGAAG +
Preference number: 6 (lower is better)
Translates to: CSPSDLPAGIEG*SENGGFFPSVK
Trigger: CTTCACACTAGGAAAGAAACCACCATTTTCTGACAAGCCCTCGATTCCAGCGGGAAGGTCACTCGGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS TCA 72 bp TCATGTCTTTCCGTGGTCGGTGGTAAAGGAGGCTTTTaGATCTTGGGTAAATGCTCCCCGAGTGACCTTCCC +
Preference number: 6 (lower is better)
Translates to: SCLSVVGGKGGF*ILGKCSPSDLP
Trigger: GGGAAGGTCACTCGGGGAGCATTTACCCAAGATTCAAAAGCCTCCTTTACCACCGACCACGGAAAGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520344.1
ENST00000521416.5
CDS GCA 72 bp ATGGTGGTTTCTTTCGCTTTGCCGTTTTGTGGTTTCTaGTTCTGCTGGGTTCTTCGTGGTTGGTCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: MVVSFALPFCGF*FCWVLRGWSGV
Trigger: CACCCCAGACCAACCACGAAGAACCCAGCAGAAGCAGAAACCACAAAACGGCAAAGCGAAAGAAACCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520344.1
CDS CCA 72 bp TTACTGAGAATCGGCACCCGGAGCTTGGGGAACTTCTaGATGTCATTTTCTGTCAGGTTCAAGAAGCGAGCC +
Preference number: 6 (lower is better)
Translates to: LLRIGTRSLGNF*MSFSVRFKKRA
Trigger: GGCTCGCTTCTTGAACCTGACAGAAAATGACATCCAGAAGTTCCCCAAGCTCCGGGTGCCGATTCTCAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000046794.10
ENST00000519594.5
ENST00000522760.5
ENST00000522823.5
CDS GCA 72 bp CAGCAAGAGCCGGCACTCCCAAAACCTGTCTGGATCTaGTCACTTTTCCTCATCTTCATGTTCTGCCTACAA +
Preference number: 6 (lower is better)
Translates to: QQEPALPKPVWI*SLFLIFMFCLQ
Trigger: TTGTAGGCAGAACATGAAGATGAGGAAAAGTGAGCAGATCCAGACAGGTTTTGGGAGTGCCGGCTCTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520344.1
ENST00000521416.5
CDS CCA 72 bp TGCTATGGGTACCCTGCAGCATGCGTTAATGTGCACTaGTATCTGGAACCTCGGTTTTTCCCATCAATGAGC +
Preference number: 6 (lower is better)
Translates to: CYGYPAACVNVH*YLEPRFFPSMS
Trigger: GCTCATTGATGGGAAAAACCGAGGTTCCAGATACCAGTGCACATTAACGCATGCTGCAGGGTACCCATAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5
CDS GCA 72 bp CTCCCTTTTAAGGTTCAACTCGGGACTGAAAAATCTTaGGTTTCCTTACACCAGCCGCACTCACTTGCGTGT +
Preference number: 6 (lower is better)
Translates to: LPFKVQLGTEKS*VSLHQPHSLAC
Trigger: ACACGCAAGTGAGTGCGGCTGGTGTAAGGAAACGCAAGATTTTTCAGTCCCGAGTTGAACCTTAAAAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522823.5
CDS CAA 72 bp ATGAACGATCTAGGGGAGGTTTCGTGCTTCTGTCTATaGAAGGAGCAGGGAGCTTTGCCGTTTTGTGGTTTC +
Preference number: 6 (lower is better)
Translates to: MNDLGEVSCFCL*KEQGALPFCGF
Trigger: GAAACCACAAAACGGCAAAGCTCCCTGCTCCTTCAATAGACAGAAGCACGAAACCTCCCCTAGATCGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS CAA 72 bp ATTGCACCCTCTTTGAGGTCTTTTCAGGGCCAACAGTaGGTTCTGAAGTTCTTTTCCCTCCGTGTCACCGAT +
Preference number: 6 (lower is better)
Translates to: IAPSLRSFQGQQ*VLKFFSLRVTD
Trigger: ATCGGTGACACGGAGGGAAAAGAACTTCAGAACCAACTGTTGGCCCTGAAAAGACCTCAAAGAGGGTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CAA 90 bp TGTTTGCAAATGAAGGTTTATGGGCGCAAAGCCAAGCCTGTTTGTTaGCTCATTGTCTGTGGCTGCTTTTGTGCTCCAGTAGCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: CLQMKVYGRKAKPVC*LIVCGCFCAPVAEL
Trigger: CAACTCTGCTACTGGAGCACAAAAGCAGCCACAGACAATGAGCAAACAAACAGGCTTGGCTTTGCGCCCATAAACCTTCATTTGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CAA 90 bp TCTGTGTTTGCAAATGAAGGTTTATGGGCGCAAAGCCAAGCCTGTTaGTTTGCTCATTGTCTGTGGCTGCTTTTGTGCTCCAGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: SVFANEGLWAQSQAC*FAHCLWLLLCSSSR
Trigger: TCTGCTACTGGAGCACAAAAGCAGCCACAGACAATGAGCAAACAAACAGGCTTGGCTTTGCGCCCATAAACCTTCATTTGCAAACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS GCA 72 bp CAAGAAGCGAGCCCCATCGATGTGGTACTTCTTCACTaGCTTCTCACAGTCCTTATAGTTGAGCTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: QEASPIDVVLLH*LLTVLIVELLE
Trigger: TTCAAGAAGCTCAACTATAAGGACTGTGAGAAGGCAGTGAAGAAGTACCACATCGATGGGGCTCGCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000046794.10
ENST00000519149.1
ENST00000519594.5
ENST00000522760.5
ENST00000522823.5
CDS CCA 72 bp TGCAGCCTACCCTCTGTGTTTGCAAATGAAGGTTTATaGGCGCAAAGCCAAGCCTGTTTGTTTGCTCATTGT +
Preference number: 6 (lower is better)
Translates to: CSLPSVFANEGL*AQSQACLFAHC
Trigger: ACAATGAGCAAACAAACAGGCTTGGCTTTGCGCCCATAAACCTTCATTTGCAAACACAGAGGGTAGGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS CAA 72 bp ATGAAGGTTTATGGGCGCAAAGCCAAGCCTGTTTGTTaGCTCATTGTCTGTGGCTGCTTTTGTGCTCCAGTA +
Preference number: 6 (lower is better)
Translates to: MKVYGRKAKPVC*LIVCGCFCAPV
Trigger: TACTGGAGCACAAAAGCAGCCACAGACAATGAGCAAACAAACAGGCTTGGCTTTGCGCCCATAAACCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522760.5
CDS TCA 72 bp AGTAGGATGGAACCTTGCTCCCAGGGTGTTTCTAGATaGCTTAACCACCATAGAATCCATTTACAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: SRMEPCSQGVSR*LNHHRIHLQRG
Trigger: GCCCCTTTGTAAATGGATTCTATGGTGGTTAAGTCATCTAGAAACACCCTGGGAGCAAGGTTCCATCCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523369.1
CDS GCA 72 bp TGTGCCATCCTGGTTTATCTTTCTAAGAGCAGCTTCTaGCTCTGGTCGGGTAATATAAGAAACGTACCACTC +
Preference number: 6 (lower is better)
Translates to: CAILVYLSKSSF*LWSGNIRNVPL
Trigger: GAGTGGTACGTTTCTTATATTACCCGACCAGAGGCAGAAGCTGCTCTTAGAAAGATAAACCAGGATGGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000046794.10
ENST00000521416.5
CDS CAA 90 bp GCCTCTAGGGATCTGACAAACATGTCAGTTGCACTTTGCAGCTTCTaGAGTGCAAAACCTGTCATTCAACGAACATTCAGTTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: ASRDLTNMSVALCSF*SAKPVIQRTFSSPN
Trigger: GTTTGGAGAACTGAATGTTCGTTGAATGACAGGTTTTGCACTCAAGAAGCTGCAAAGTGCAACTGACATGTTTGTCAGATCCCTAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520322.1
CDS CAA 72 bp CTCTTTCCCTCGGAGTCCAGTTCCCAACAAGTAAACTaGACTTTCCTTCTGATAACGGATCTGGATGTTGTA +
Preference number: 6 (lower is better)
Translates to: LFPSESSSQQVN*TFLLITDLDVV
Trigger: TACAACATCCAGATCCGTTATCAGAAGGAAAGTCAAGTTTACTTGTTGGGAACTGGACTCCGAGGGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5
CDS TCA 72 bp CCACATGCCATGAAATTCACCCTTCTTAAAACCCTGTaGTCTCTAGATAGTCTTTCCTTCATCAGACCCTTG +
Preference number: 6 (lower is better)
Translates to: PHAMKFTLLKTL*SLDSLSFIRPL
Trigger: CAAGGGTCTGATGAAGGAAAGACTATCTAGAGATCACAGGGTTTTAAGAAGGGTGAATTTCATGGCATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520322.1
CDS CAA 90 bp CAGAAAGTCCTCTTTCCCTCGGAGTCCAGTTCCCAACAAGTAAACTaGACTTTCCTTCTGATAACGGATCTGGATGTTGTAAACTTTATC +
Preference number: 6 (lower is better)
Translates to: QKVLFPSESSSQQVN*TFLLITDLDVVNFI
Trigger: GATAAAGTTTACAACATCCAGATCCGTTATCAGAAGGAAAGTCAAGTTTACTTGTTGGGAACTGGACTCCGAGGGAAAGAGGACTTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000046794.10
ENST00000520322.1
ENST00000521416.5