RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LCORL (Homo sapiens)

Ensembl gene IDs: ENSG00000178177

Ensembl transcript IDs: ENST00000326877.8, ENST00000382224.5, ENST00000382226.5, ENST00000510451.5, ENST00000512376.2, ENST00000635767.1, ENST00000637787.1, ENST00000674942.1, ENST00000675131.1, ENST00000675143.1, ENST00000675605.1, ENST00000675927.1, ENST00000676061.1, ENST00000676180.1

Found 1063 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGAGATTTTCACTTTTGCCGGTCTACCAGGCTTCCTACTTATTaGCAAAGGCTTCTGATTTGGTCGAATAATGTTCTTGGAAGGCTG +
Preference number: 1 (lower is better)
Translates to: ARDFHFCRSTRLPTY*QRLLIWSNNVLGRL
Trigger: CAGCCTTCCAAGAACATTATTCGACCAAATCAGAAGCCTTTGGCAATAAGTAGGAAGCCTGGTAGACCGGCAAAAGTGAAAATCTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CCA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATAGCTCCTCTGTTGGTGTTGACTGTG +
Preference number: 1 (lower is better)
Translates to: VHLGNFLLGIQSYQC*TGPEMIAPLLVLTV
Trigger: CACAGTCAACACCAACAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
3UTR CCA 90 bp TGCCGGTCTACCAGGCTTCCTACTTATTGCCAAAGGCTTCTGATTTaGTCGAATAATGTTCTTGGAAGGCTGAGGTATCACAGATTTGTT +
Preference number: 1 (lower is better)
Translates to: CRSTRLPTYCQRLLI*SNNVLGRLRYHRFV
Trigger: AACAAATCTGTGATACCTCAGCCTTCCAAGAACATTATTCGACCAAATCAGAAGCCTTTGGCAATAAGTAGGAAGCCTGGTAGACCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CCA 90 bp ACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTaGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATA +
Preference number: 1 (lower is better)
Translates to: THGQAIQKERSHVLM*FTIPKLAFSGMGKI
Trigger: TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR TCA 90 bp CTTCCAGCACTAAAGGGCTCATTCTGGCAAACAGTGATGTTTGTTTaGTCAATTTTAGGCTTTGGTGGTCTTCCAATTGGTCGCTTAATC +
Preference number: 1 (lower is better)
Translates to: LPALKGSFWQTVMFV*SILGFGGLPIGRLI
Trigger: GATTAAGCGACCAATTGGAAGACCACCAAAGCCTAAAATTGATCAAACAAACATCACTGTTTGCCAGAATGAGCCCTTTAGTGCTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CCA 90 bp CTCATTCTGGCAAACAGTGATGTTTGTTTGATCAATTTTAGGCTTTaGTGGTCTTCCAATTGGTCGCTTAATCTGTTTCACAACTTGGGG +
Preference number: 1 (lower is better)
Translates to: LILANSDVCLINFRL*WSSNWSLNLFHNLG
Trigger: CCCCAAGTTGTGAAACAGATTAAGCGACCAATTGGAAGACCACCAAAGCCTAAAATTGATCAAACAAACATCACTGTTTGCCAGAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR TCA 90 bp TTTTGGAGAGCTGATCCTTCTAGGACTGAAGAGGTTTTGGAAACTTaGTACATAACATCCAACAGACCAGAACCATCAGGTTGTGATTTT +
Preference number: 1 (lower is better)
Translates to: FWRADPSRTEEVLET*YITSNRPEPSGCDF
Trigger: AAAATCACAACCTGATGGTTCTGGTCTGTTGGATGTTATGTATCAAGTTTCCAAAACCTCTTCAGTCCTAGAAGGATCAGCTCTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR GCA 90 bp ATATTCAAAGCCAGACCCCAAGATCTCACTTTCAGTAGTCAAGCTTaGTACAGCACTTATTCTTTCACCCAAGTCAATTTTGTCTTCACT +
Preference number: 1 (lower is better)
Translates to: IFKARPQDLTFSSQA*YSTYSFTQVNFVFT
Trigger: AGTGAAGACAAAATTGACTTGGGTGAAAGAATAAGTGCTGTAGCAAGCTTGACTACTGAAAGTGAGATCTTGGGGTCTGGCTTTGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR TCA 90 bp TGTTCTAAAGGAGGCAAGCAGCTGCTAATACTTACTTCTCTTTCCTaGGGTGAAGTTCTATTAATAGTCACAGATATGCCAGAGATTTTC +
Preference number: 1 (lower is better)
Translates to: CSKGGKQLLILTSLS*GEVLLIVTDMPEIF
Trigger: GAAAATCTCTGGCATATCTGTGACTATTAATAGAACTTCACCTCAGGAAAGAGAAGTAAGTATTAGCAGCTGCTTGCCTCCTTTAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTaGCATGGGAAAAATAAATTTAAGCACCAAACCTTTAGTATTCTG +
Preference number: 1 (lower is better)
Translates to: EPCSHVVYHTKACFL*HGKNKFKHQTFSIL
Trigger: CAGAATACTAAAGGTTTGGTGCTTAAATTTATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR CCA 90 bp TTAACAAGTAACATTTCTAGGGAAAATGAAGGAAGTACCACAAACTaGCTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTAT +
Preference number: 1 (lower is better)
Translates to: LTSNISRENEGSTTN*LERSLSITSEEDQY
Trigger: ATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCCTTCATTTTCCCTAGAAATGTTACTTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR TCA 90 bp CCAGAACCATCAGGTTGTGATTTTGAGACAGAACTTACTCGTAGCTaGGGAATTTTTAACTGTACAGTAGGATTTGAAGTTTCATATTGG +
Preference number: 1 (lower is better)
Translates to: PEPSGCDFETELTRS*GIFNCTVGFEVSYW
Trigger: CCAATATGAAACTTCAAATCCTACTGTACAGTTAAAAATTCCTCAGCTACGAGTAAGTTCTGTCTCAAAATCACAACCTGATGGTTCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR GCA 90 bp ATTCCATCATCAAGAGCATTTGACTTCTTACGGCGTGTTTGCTTTTaGCTATTAGCTGGCATGGTCTTTAGTACTATCTTTAATATGTTG +
Preference number: 1 (lower is better)
Translates to: IPSSRAFDFLRRVCF*LLAGMVFSTIFNML
Trigger: CAACATATTAAAGATAGTACTAAAGACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAGTCAAATGCTCTTGATGATGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR GCA 90 bp TCTAAAATTCCATCATCAAGAGCATTTGACTTCTTACGGCGTGTTTaGTTTTGCCTATTAGCTGGCATGGTCTTTAGTACTATCTTTAAT +
Preference number: 1 (lower is better)
Translates to: SKIPSSRAFDFLRRV*FCLLAGMVFSTIFN
Trigger: ATTAAAGATAGTACTAAAGACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAGTCAAATGCTCTTGATGATGGAATTTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR GCA 90 bp TTTAAGTATTTTATCTTGATGATCACTCTTATTGCTGCTGATTTCTaGTGGTGTGAGAGATGGAGGCTGGTTAATGTTTGCTTCAAGTTT +
Preference number: 1 (lower is better)
Translates to: FKYFILMITLIAADF*WCERWRLVNVCFKF
Trigger: AAACTTGAAGCAAACATTAACCAGCCTCCATCTCTCACACCAGCAGAAATCAGCAGCAATAAGAGTGATCATCAAGATAAAATACTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR GCA 90 bp AAATTTTCATCAAGACTAGCAAGTTCTCTTTTTATCTGTAAAGACTaGCTTCTAAACATGGGTGAATCAGAGGAGTTGCGCATTGCAAAT +
Preference number: 1 (lower is better)
Translates to: KFSSRLASSLFICKD*LLNMGESEELRIAN
Trigger: ATTTGCAATGCGCAACTCCTCTGATTCACCCATGTTTAGAAGGCAGTCTTTACAGATAAAAAGAGAACTTGCTAGTCTTGATGAAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CCA 90 bp ATTCCTCTATTCACTACTGGCTTAACGTGTTCAACAGTTACAGTTTaGCAAGATAAACAATGTAAATCTTTAATACAGACTGGCAGAGGT +
Preference number: 1 (lower is better)
Translates to: IPLFTTGLTCSTVTV*QDKQCKSLIQTGRG
Trigger: ACCTCTGCCAGTCTGTATTAAAGATTTACATTGTTTATCTTGCCAAACTGTAACTGTTGAACACGTTAAGCCAGTAGTGAATAGAGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAACCTTCTAAACATGGGTaGATCAGAGGAGTTGCGCAT +
Preference number: 2 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKPSKHG*IRGVAH
Trigger: ATGCGCAACTCCTCTGATTCACCCATGTTTAGAAGG...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR GCA 90 bp GTCAGGCATTACTACCCTCTGCTGCAAGTCACCCCTGATCTCAGGTGGCAAAACGAAGATTTTCTGCTGTaGGCTTCCACGTTACTTTGG +
Preference number: 2 (lower is better)
Translates to: VRHYYPLLQVTPDLRWQNEDFLL*ASTLLW
Trigger: CCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTC...GTTTTGCCACCTGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCAGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR GCA 90 bp GTCAGGCATTACTACCCTCTGCTGCAAGTCACCCCTGATCTCAGGTGGCAAAACGCTGAAACTGTGCTTTaGACTATTAAAGGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: VRHYYPLLQVTPDLRWQNAETVL*TIKGRE
Trigger: TTCCCTACCTTTAATAGTGCAAAGCACAGTTTCAGC...GTTTTGCCACCTGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR GCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAACTCTGTGTTCTCCTGTaGTTCAGATTCCTTATGTGT +
Preference number: 2 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKLCVLL*FRFLMC
Trigger: ACACATAAGGAATCTGAAGCACAGGAGAACACAGAG...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp TTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: LQLPVPESVILYNPVSGNAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...ATTACCAGACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR TCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAACTTTTACTTCTGATATaGGACATTCTGGGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKLLLLI*DILGFS
Trigger: GGAAAAGCCCAGAATGTCTCATATCAGAAGTAAAAG...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR GCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGACTGTTCCATGGTTGTaGAGCTTTCCCTCTCTTTTC +
Preference number: 2 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGTVPWL*SFPSLF
Trigger: GAAAAGAGAGGGAAAGCTGCACAACCATGGAACAGT...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAAAGCCATGTTCTCATGTaGTTTACCATACCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKSHVLM*FTIPKL
Trigger: AAGCTTTGGTATGGTAAACCACATGAGAACATGGCT...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATAGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKIVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR TCA 90 bp GATGATAGCTCCTCTGTTGGTGTTGACTGTGAAGAATCAAGAGATGGTATACAAGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: DDSSSVGVDCEESRDGIQVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...TTGTATACCATCTCTTGATTCTTCACAGTCAACACCAACAGAGGAGCTATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675131.1
3UTR-3UTR TCA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 2 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR GCA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCAGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 2 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
3UTR-3UTR GCA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 2 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR GCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAAAAATTGTTTTCCATCTaGAGATTTCTCCTGTGGCTT +
Preference number: 2 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKKLFSI*RFLLWL
Trigger: AAGCCACAGGAGAAATCTGCAGATGGAAAACAATTT...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAATCCCATTCACACATaGCCAGGCTATCCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGNPIHT*PGYPKR
Trigger: TCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATT...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCAAGGACAGAGAAAAGTaGCAGTTTCAGCTAGGACGA +
Preference number: 2 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFKDREK*QFQLGR
Trigger: TCGTCCTAGCTGAAACTGTCACTTTTCTCTGTCCTT...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCTGTCTCCTGTCAGAGTaGGCATTTGTAATTCCCACG +
Preference number: 2 (lower is better)
Translates to: LCFPLGEGGNILNNASSGCLLSE*AFVIPT
Trigger: CGTGGGAATTACAAATGCTCACTCTGACAGGAGACA...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp GGAAGTACCACAAACTGGCTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 2 (lower is better)
Translates to: GSTTNWLERSLSITSEEDTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...GTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR TCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGCTTTTCCACCTTTCATaGTGCAACCTCTTAAACTCA +
Preference number: 2 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGLFHLS*CNLLNS
Trigger: TGAGTTTAAGAGGTTGCATCATGAAAGGTGGAAAAG...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 2 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675131.1
3UTR-3UTR TCA 90 bp TTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATGAGTCAACACTTGAGTaGGTTACAGGCCCAGAACAT +
Preference number: 2 (lower is better)
Translates to: LQLPVPESVILYNPVSGNESTLE*VTGPEH
Trigger: ATGTTCTGGGCCTGTAACTCACTCAAGTGTTGACTC...ATTACCAGACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR TCA 90 bp TTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATGTAAGAGTCAACACTTaGGTGAGTTACAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: LQLPVPESVILYNPVSGNVRVNT*VSYRPR
Trigger: TCTGGGCCTGTAACTCACTCAAGTGTTGACTCTTAC...ATTACCAGACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR GCA 90 bp GGAAGTACCACAAACTGGCTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 2 (lower is better)
Translates to: GSTTNWLERSLSITSEEDHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...GTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACGGAAGTACCACAAACTaGCTAGAAAGGAGCTTATCA +
Preference number: 2 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYGSTTN*LERSLS
Trigger: TGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGAGATTTATCACAATCTaGGGTGGGCCTAGGAATCTC +
Preference number: 2 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLRFITI*GGPRNL
Trigger: GAGATTCCTAGGCCCACCTCAGATTGTGATAAATCT...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 2 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR TCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR GCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 2 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWAHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGTTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 2 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp GGAAGTACCACAAACTGGCTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACGCTGAAACTGTGCTTTaGACTATTAAAGGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: GSTTNWLERSLSITSEEDAETVL*TIKGRE
Trigger: TTCCCTACCTTTAATAGTGCAAAGCACAGTTTCAGC...GTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTACCATACCAAAGCTTaGTTTCTCTGGCATGGGAAA +
Preference number: 2 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFYHTKA*FLWHGK
Trigger: TTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTA...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATTTCTGGTCACCACCTTaGCCCTACCCCTACTACCAT +
Preference number: 2 (lower is better)
Translates to: PASTELNHGFKRFQVSTYFWSPP*PYPYYH
Trigger: ATGGTAGTAGGGGTAGGGGCAAGGTGGTGACCAGAA...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674942.1
3UTR-3UTR CCA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGTTTTACAACTGCTCATaGGTCAGGTTATCATCACAA +
Preference number: 2 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWFYNCS*VRLSSQ
Trigger: TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAA...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGAGCCATGTTCTCATGTaGTTTACCATACCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMSHVLM*FTIPKL
Trigger: AAGCTTTGGTATGGTAAACCACATGAGAACATGGCT...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp TTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 2 (lower is better)
Translates to: FTHGQAIQKERSHVLMWFQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...AAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR CCA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACTCCTCTATTCACTACTaGCTTAACGTGTTCAACAGT +
Preference number: 2 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYSSIHY*LNVFNS
Trigger: ACTGTTGAACACGTTAAGCCAGTAGTGAATAGAGGA...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CAA 90 bp CCTTCCAGCACTAAAGGGCTCATTCTGGCAAACAGTGATGTTTGTTaGATCAATTTTAGGCTTTGGTGGTCTTCCAATTGGTCGCTTAAT +
Preference number: 2 (lower is better)
Translates to: PSSTKGLILANSDVC*INFRLWWSSNWSLN
Trigger: ATTAAGCGACCAATTGGAAGACCACCAAAGCCTAAAATTGATCAAACAAACATCACTGTTTGCCAGAATGAGCCCTTTAGTGCTGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCCATTTGAGAAGCTTATaGCTTAGATGGGCAGAATCA +
Preference number: 2 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWAHLRSL*LRWAES
Trigger: TGATTCTGCCCATCTAAGTCATAAGCTTCTCAAATG...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp TTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATCCTGGTGGATGCACTTaGGTGCATTTTGTATTTCAT +
Preference number: 2 (lower is better)
Translates to: LQLPVPESVILYNPVSGNPGGCT*VHFVFH
Trigger: ATGAAATACAAAATGCACTCAAGTGCATCCACCAGG...ATTACCAGACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR GCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGTGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 2 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGCEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCGCTGAAACTGTGCTTTaGACTATTAAAGGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGAETVL*TIKGRE
Trigger: TTCCCTACCTTTAATAGTGCAAAGCACAGTTTCAGC...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCACCATTGCTGAAACTGTaGTTTGCACTATTAAAGGTA +
Preference number: 2 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPPLLKL*FALLKV
Trigger: TACCTTTAATAGTGCAAAGCACAGTTTCAGCAATGG...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCATTTTTGGTGATATCTaGCTGGGAAATCTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGIFGDI*LGNLSS
Trigger: GGAAGAGAGATTTCCCAGGCAGATATCACCAAAAAT...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCATTTTTGGTGATATCTaGCTGGGAAATCTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFIFGDI*LGNLSS
Trigger: GGAAGAGAGATTTCCCAGGCAGATATCACCAAAAAT...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCAGAGAAGCAGCATTCTaGTCTTGGACTAGAAATTTC +
Preference number: 2 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGREAAF*SWTRNF
Trigger: GAAATTTCTAGTCCAAGAGCAGAATGCTGCTTCTCT...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGTCTTTTGGACAGTTATaGTCCTCGTTTAATTACAAG +
Preference number: 2 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGSFGQL*SSFNYK
Trigger: CTTGTAATTAAACGAGGACCATAACTGTCCAAAAGA...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp TTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATGCTGATGGAGGTAAGTaGAAGCTGTTGGGAATTTTA +
Preference number: 2 (lower is better)
Translates to: LQLPVPESVILYNPVSGNADGGK*KLLGIL
Trigger: TAAAATTCCCAACAGCTTCCACTTACCTCCATCAGC...ATTACCAGACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR TCA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTACGCTACCAATTTATaGGCACTATTCACTGTCAAT +
Preference number: 2 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFYATNL*ALFTVN
Trigger: ATTGACAGTGAATAGTGCTCATAAATTGGTAGCGTA...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCCTAGTAGCTTGCATTTaGGAAGCTTATGACTTAGAT +
Preference number: 2 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFLVACI*EAYDLD
Trigger: ATCTAAGTCATAAGCTTCTCAAATGCAAGCTACTAG...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGATCATCAAGAGCATTTaGCTTCTTACGGCGTGTTTG +
Preference number: 2 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMIIKSI*LLTACL
Trigger: CAAACACGCCGTAAGAAGTCAAATGCTCTTGATGAT...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCAGGAGATACATGTGTTaGAAGGATTGTTGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGRRYMC*KDCCVE
Trigger: TTCAACACAACAATCCTTTCAACACATGTATCTCCT...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCATAAGATGGTTCAACTaGATGGCTGGAATGGTCTTT +
Preference number: 2 (lower is better)
Translates to: LCFPLGEGGNILNNASSGIRWFN*MAGMVF
Trigger: AAAGACCATTCCAGCCATTCAGTTGAACCATCTTAT...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 2 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR TCA 90 bp TTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATCTGTACAGTAGGATTTaGAGTTTCATATTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LQLPVPESVILYNPVSGNLYSRI*SFILEA
Trigger: AGCCTCCAATATGAAACTTCAAATCCTACTGTACAG...ATTACCAGACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR GCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 2 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCCCATTGCTGAAACTGTaGTTTGCACTATTAAAGGTA +
Preference number: 2 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWAPLLKL*FALLKV
Trigger: TACCTTTAATAGTGCAAAGCACAGTTTCAGCAATGG...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTCTCTGTGTTCTCCTGTaGTTCAGATTCCTTATGTGT +
Preference number: 2 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVLCVLL*FRFLMC
Trigger: ACACATAAGGAATCTGAAGCACAGGAGAACACAGAG...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCAAAGTTAAAATGCACTaGCCAGCTTCTAACTACCCA +
Preference number: 2 (lower is better)
Translates to: LCFPLGEGGNILNNASSGKVKMH*PASNYP
Trigger: TGGGTAGTTAGAAGCTGGGCAGTGCATTTTAACTTT...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR GCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCACTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 2 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR CCA 90 bp TTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTTTTTACAACTGCTCATaGGTCAGGTTATCATCACAA +
Preference number: 2 (lower is better)
Translates to: FTHGQAIQKERSHVLMWFFYNCS*VRLSSQ
Trigger: TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAA...AAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATTTTACAACTGCTCATaGGTCAGGTTATCATCACAA +
Preference number: 2 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSFYNCS*VRLSSQ
Trigger: TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAA...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
3UTR-3UTR CCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCAATCCCATTCACACATaGCCAGGCTATCCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFNPIHT*PGYPKR
Trigger: TCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATT...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAAGGAAGTACCACAAACTaGCTAGAAAGGAGCTTATCA +
Preference number: 2 (lower is better)
Translates to: LERSLSITSEEDQYNVQQGSTTN*LERSLS
Trigger: TGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCGTTCAACTGAATGGCTaGAATGGTCTTTCACCAATA +
Preference number: 2 (lower is better)
Translates to: LCFPLGEGGNILNNASSGVQLNG*NGLSPI
Trigger: TATTGGTGAAAGACCATTCCAGCCATTCAGTTGAAC...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCGACCAAATAACTGCTTaGTTGTGTAGTTTCTCACTC +
Preference number: 2 (lower is better)
Translates to: LCFPLGEGGNILNNASSGDQITA*LCSFSL
Trigger: GAGTGAGAAACTACACAACCAAGCAGTTATTTGGTC...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCGCAGCATTCTGCTCTTaGACTAGAAATTTCAACATA +
Preference number: 2 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWAAAFCS*TRNFNI
Trigger: TATGTTGAAATTTCTAGTCCAAGAGCAGAATGCTGC...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CAA 90 bp GGAGATTTACTTCTAAGAGATACCTTTGCCTTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATG +
Preference number: 2 (lower is better)
Translates to: GDLLLRDTFAFSFTN*LRGSWYPPVLQLLM
Trigger: CATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAAGGCAAAGGTATCTCTTAGAAGTAAATCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
3UTR CAA 90 bp TTTCTGAAGGGGCTGGCATTAAAGTCAGAATATTTGGTCCCTAATTaGATTCCCCTGGTATTTATTACTTCCAAAGGGTTTCGGGCATTT +
Preference number: 2 (lower is better)
Translates to: FLKGLALKSEYLVPN*IPLVFITSKGFRAF
Trigger: AAATGCCCGAAACCCTTTGGAAGTAATAAATACCAGGGGAATCAAATTAGGGACCAAATATTCTGACTTTAATGCCAGCCCCTTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CAA 90 bp CTTTATTTATGTCCAGTGCTCCAGACTGAATGTCTTTCAAAGCTTTaGAGAGCAAACCATCTGCAAACTCAGCACTTCTTTCCACATAGT +
Preference number: 2 (lower is better)
Translates to: LYLCPVLQTECLSKL*RANHLQTQHFFPHS
Trigger: ACTATGTGGAAAGAAGTGCTGAGTTTGCAGATGGTTTGCTCTCAAAAGCTTTGAAAGACATTCAGTCTGGAGCACTGGACATAAATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR TCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTAGATTTATCACAATCTaGGGTGGGCCTAGGAATCTC +
Preference number: 2 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFRFITI*GGPRNL
Trigger: GAGATTCCTAGGCCCACCTCAGATTGTGATAAATCT...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCAGATTTATCACAATCTaGGGTGGGCCTAGGAATCTC +
Preference number: 2 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSRFITI*GGPRNL
Trigger: GAGATTCCTAGGCCCACCTCAGATTGTGATAAATCT...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp TTGTTTAATTCCTCTAATAAGGAATCATTTGAAGCAGAAGTAGCCCACCACCTGATCATCAAGAGCATTTaGCTTCTTACGGCGTGTTTG +
Preference number: 2 (lower is better)
Translates to: LFNSSNKESFEAEVAHHLIIKSI*LLTACL
Trigger: CAAACACGCCGTAAGAAGTCAAATGCTCTTGATGAT...CAGGTGGTGGGCTACTTCTGCTTCAAATGATTCCTTATTAGAGGAATTAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACTGTCTCCTGTCAGAGTaGGCATTTGTAATTCCCACG +
Preference number: 2 (lower is better)
Translates to: GICFITFYHYSCILHKSNCLLSE*AFVIPT
Trigger: CGTGGGAATTACAAATGCTCACTCTGACAGGAGACA...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp TGCTGTTTTTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTGAACTTACTCGTAGCTaGGGAATTTTTAACTGTACA +
Preference number: 2 (lower is better)
Translates to: CCFCSCQSLNLSYYITQCELTRS*GIFNCT
Trigger: TGTACAGTTAAAAATTCCTCAGCTACGAGTAAGTTC...ACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAAAAACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR GCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGTTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 2 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCTACCATACCAAAGCTTaGTTTCTCTGGCATGGGAAA +
Preference number: 2 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPYHTKA*FLWHGK
Trigger: TTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTA...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGATTTTTGGTGATATCTaGCTGGGAAATCTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMIFGDI*LGNLSS
Trigger: GGAAGAGAGATTTCCCAGGCAGATATCACCAAAAAT...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTTTCTTACGGCGTGTTTaGTTTTGCCTATTAGCTGGC +
Preference number: 2 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFFLRRV*FCLLAG
Trigger: GCCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAA...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 2 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
3UTR-3UTR GCA 90 bp TGGCTTATCACTATTTATATCACCTATAAACATTGTAGAGGATCCTGCAGTTTCATTGCTGCTGATTTCTaGTGGTGTGAGAGATGGAGG +
Preference number: 2 (lower is better)
Translates to: WLITIYITYKHCRGSCSFIAADF*WCERWR
Trigger: CCTCCATCTCTCACACCAGCAGAAATCAGCAGCAAT...GAAACTGCAGGATCCTCTACAATGTTTATAGGTGATATAAATAGTGATAAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR GCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACTTTTTCTGTGCGCTCTaGTTGAGCTCTTGCCCACAA +
Preference number: 2 (lower is better)
Translates to: GICFITFYHYSCILHKSNFFCAL*LSSCPQ
Trigger: TTGTGGGCAAGAGCTCAAGCAGAGCGCACAGAAAAA...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGAGTTTTAATCTTGCTTaGGTTCCTTTTTCTGTGGCA +
Preference number: 2 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLSFNLA*VPFSVA
Trigger: TGCCACAGAAAAAGGAACCCAAGCAAGATTAAAACT...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGATGGTTCAACTGAATaGCTGGAATGGTCTTTCACC +
Preference number: 2 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTDGSTE*LEWSFT
Trigger: GGTGAAAGACCATTCCAGCCATTCAGTTGAACCATC...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACAGATTTATCACAATCTaGGGTGGGCCTAGGAATCTC +
Preference number: 2 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNRFITI*GGPRNL
Trigger: GAGATTCCTAGGCCCACCTCAGATTGTGATAAATCT...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTATCATCAAGAGCATTTaGCTTCTTACGGCGTGTTTG +
Preference number: 2 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFIIKSI*LLTACL
Trigger: CAAACACGCCGTAAGAAGTCAAATGCTCTTGATGAT...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTCCTGGTGGATGCACTTaGGTGCATTTTGTATTTCAT +
Preference number: 2 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTPGGCT*VHFVFH
Trigger: ATGAAATACAAAATGCACTCAAGTGCATCCACCAGG...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 2 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR TCA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAAAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 2 (lower is better)
Translates to: LERSLSITSEEDQYNVQQRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR TCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGATCACATACTTCCTTTaGCAAAAGAGGACTACGAAA +
Preference number: 2 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMITYFL*QKRTTK
Trigger: TTTCGTAGTCCTCTTTTGTCAAAGGAAGTATGTGAT...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAAGCAAATAAAGTTTCTTaGCGCTTTCGAAATCTTGTC +
Preference number: 2 (lower is better)
Translates to: LERSLSITSEEDQYNVQQANKVS*RFRNLV
Trigger: GACAAGATTTCGAAAGCGTCAAGAAACTTTATTTGC...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR GCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 2 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
3UTR-3UTR GCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGTGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 2 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLCEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCCTCTGTGTTCTCCTGTaGTTCAGATTCCTTATGTGT +
Preference number: 2 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSLCVLL*FRFLMC
Trigger: ACACATAAGGAATCTGAAGCACAGGAGAACACAGAG...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATGAAGATTTTCTGCTGTaGGCTTCCACGTTACTTTGG +
Preference number: 2 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHEDFLL*ASTLLW
Trigger: CCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTC...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTTCTTACGGCGTGTTTaGTTTTGCCTATTAGCTGGC +
Preference number: 2 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNFLRRV*FCLLAG
Trigger: GCCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 2 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR GCA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 2 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
3UTR-3UTR GCA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCACTTGTAGCATaGCAGCCACTGAATTTTCAG +
Preference number: 2 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLFSLVA*QPLNFQ
Trigger: CTGAAAATTCAGTGGCTGGCATGCTACAAGTGAAAA...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675131.1
3UTR-3UTR CCA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAATTTTACAACTGCTCATaGGTCAGGTTATCATCACAA +
Preference number: 2 (lower is better)
Translates to: LERSLSITSEEDQYNVQQFYNCS*VRLSSQ
Trigger: TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAA...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCACTGAATGGCTGGAATaGTCTTTCACCAATAAAAAT +
Preference number: 2 (lower is better)
Translates to: LCFPLGEGGNILNNASSGTEWLE*SFTNKN
Trigger: ATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGT...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAGATGGTTCAACTGAATaGCTGGAATGGTCTTTCACC +
Preference number: 2 (lower is better)
Translates to: HYSCILHKSNKDTLTHILDGSTE*LEWSFT
Trigger: GGTGAAAGACCATTCCAGCCATTCAGTTGAACCATC...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCGATGGTTCAACTGAATaGCTGGAATGGTCTTTCACC +
Preference number: 2 (lower is better)
Translates to: EGICFITFYHYSCILHKSDGSTE*LEWSFT
Trigger: GGTGAAAGACCATTCCAGCCATTCAGTTGAACCATC...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 2 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR CAA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATaGGTCCTCTTTTCTGCAATACCCAACGAAACACCTTTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: EIDTWPDLRNLYYMK*VLFSAIPNETPFLF
Trigger: AAAGAGAAAAGGTGTTTCGTTGGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCTACGCTACCAATTTATaGGCACTATTCACTGTCAAT +
Preference number: 2 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPYATNL*ALFTVN
Trigger: ATTGACAGTGAATAGTGCTCATAAATTGGTAGCGTA...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCGATGTGACTCCTCTTTaGTCTTCAGTTAGCAAACTC +
Preference number: 2 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSDVTPL*SSVSKL
Trigger: GAGTTTGCTAACTGAAGATCAAAGAGGAGTCACATC...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTAGATGTGACTCCTCTTTaGTCTTCAGTTAGCAAACTC +
Preference number: 2 (lower is better)
Translates to: TIRNTNNPTHEPTMILILDVTPL*SSVSKL
Trigger: GAGTTTGCTAACTGAAGATCAAAGAGGAGTCACATC...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
3UTR-3UTR TCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 2 (lower is better)
Translates to: HYSCILHKSNKDTLTHILTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR TCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTAAGGACTACGAAAGGCTaGTTTTGTAGAGTGAATGTT +
Preference number: 2 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVRTTKG*FCRVNV
Trigger: AACATTCACTCTACAAAATCAGCCTTTCGTAGTCCT...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTAACCTTCTTTTACTTCTaGTATGAGACATTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVTFFYF*YETFWA
Trigger: AGCCCAGAATGTCTCATATCAGAAGTAAAAGAAGGT...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTATCCAGTGCTCCAGACTaGATGTCTTTCAAAGCTTTT +
Preference number: 2 (lower is better)
Translates to: HYSCILHKSNKDTLTHILSSAPD*MSFKAF
Trigger: AAAAGCTTTGAAAGACATTCAGTCTGGAGCACTGGA...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR GCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 2 (lower is better)
Translates to: LGRCQHKCIINHEAARYIHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGTTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 2 (lower is better)
Translates to: IVQKKCASVSHTDLSQSEFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCTGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 2 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFCEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCCCATTGCTGAAACTGTaGTTTGCACTATTAAAGGTA +
Preference number: 2 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPPLLKL*FALLKV
Trigger: TACCTTTAATAGTGCAAAGCACAGTTTCAGCAATGG...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACCTCTGTGTTCTCCTGTaGTTCAGATTCCTTATGTGT +
Preference number: 2 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNLCVLL*FRFLMC
Trigger: ACACATAAGGAATCTGAAGCACAGGAGAACACAGAG...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp TGCTTACTGTCTTTTCGATCTAATCCATCTTCAGTATTTTCAGAGGTTCCATCAGCCATAAAGTATGCCTaGTTTATTTATGTCCAGTGC +
Preference number: 2 (lower is better)
Translates to: CLLSFRSNPSSVFSEVPSAIKYA*FIYVQC
Trigger: GCACTGGACATAAATAAAGCAGGCATACTTTATGGC...TGATGGAACCTCTGAAAATACTGAAGATGGATTAGATCGAAAAGACAGTAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR GCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCCACAAGGCTACTTTTTaGAGCACTGCACAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: EGICFITFYHYSCILHKSHKATF*STAQVS
Trigger: AGAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTG...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCGGAAGTACCACAAACTaGCTAGAAAGGAGCTTATCA +
Preference number: 2 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSGSTTN*LERSLS
Trigger: TGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTTCTTTTGGACAGTTATaGTCCTCGTTTAATTACAAG +
Preference number: 2 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVSFGQL*SSFNYK
Trigger: CTTGTAATTAAACGAGGACCATAACTGTCCAAAAGA...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGACCAAATAACTGCTTaGTTGTGTAGTTTCTCACTC +
Preference number: 2 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTDQITA*LCSFSL
Trigger: GAGTGAGAAACTACACAACCAAGCAGTTATTTGGTC...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR CAA 90 bp CATTTCTTGTCTTTTGAAATTGACACTTGGCCTGACTTACGAAACTaGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCAACGAA +
Preference number: 2 (lower is better)
Translates to: HFLSFEIDTWPDLRN*YYMKLVLFSAIPNE
Trigger: TTCGTTGGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTCAAAAGACAAGAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR CAA 90 bp ACTGATTATCTACTATGCTTTTTCCTTGGAGTGGGATGTCAGCATTaGTTTCTCCCTCAGTCTTATTTAAAAATTGGTTCTGGCAGAAAA +
Preference number: 2 (lower is better)
Translates to: TDYLLCFFLGVGCQH*FLPQSYLKIGSGRK
Trigger: TTTTCTGCCAGAACCAATTTTTAAATAAGACTGAGGGAGAAACAAATGCTGACATCCCACTCCAAGGAAAAAGCATAGTAGATAATCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCTACGCTACCAATTTATaGGCACTATTCACTGTCAAT +
Preference number: 2 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSYATNL*ALFTVN
Trigger: ATTGACAGTGAATAGTGCTCATAAATTGGTAGCGTA...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGCATTTGAGAAGCTTATaGCTTAGATGGGCAGAATCA +
Preference number: 2 (lower is better)
Translates to: SLLDSYGPRLITSFITSLHLRSL*LRWAES
Trigger: TGATTCTGCCCATCTAAGTCATAAGCTTCTCAAATG...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACCATTTGAGAAGCTTATaGCTTAGATGGGCAGAATCA +
Preference number: 2 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNHLRSL*LRWAES
Trigger: TGATTCTGCCCATCTAAGTCATAAGCTTCTCAAATG...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCATAAGATGGTTCAACTaGATGGCTGGAATGGTCTTT +
Preference number: 2 (lower is better)
Translates to: EGICFITFYHYSCILHKSIRWFN*MAGMVF
Trigger: AAAGACCATTCCAGCCATTCAGTTGAACCATCTTAT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACATAAGATGGTTCAACTaGATGGCTGGAATGGTCTTT +
Preference number: 2 (lower is better)
Translates to: GICFITFYHYSCILHKSNIRWFN*MAGMVF
Trigger: AAAGACCATTCCAGCCATTCAGTTGAACCATCTTAT...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACAAAACTTGTTGCTGGTaGTGTATGCACAAAGATTCC +
Preference number: 2 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNKTCCW*CMHKDS
Trigger: GGAATCTTTGTGCATACATCACCAGCAACAAGTTTT...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR TCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTATTTTATCCATTTaGGTGCACTGTTGGTCATAC +
Preference number: 2 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVLILSI*VHCWSY
Trigger: GTATGACCAACAGTGCACTCAAATGGATAAAATAAG...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR GCA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTTTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 2 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATATTTTTGGTGATATCTaGCTGGGAAATCTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHIFGDI*LGNLSS
Trigger: GGAAGAGAGATTTCCCAGGCAGATATCACCAAAAAT...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAAAGTTAAAATGCACTaGCCAGCTTCTAACTACCCA +
Preference number: 2 (lower is better)
Translates to: EGICFITFYHYSCILHKSKVKMH*PASNYP
Trigger: TGGGTAGTTAGAAGCTGGGCAGTGCATTTTAACTTT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR GCA 90 bp CATCTCCACTTACTTGCACCCAAGCATTTGTTATTTGCTCAAATCTATTGTTTACATTGTAGAGGATCCTaGAGTTTCTTTTGCATGACT +
Preference number: 2 (lower is better)
Translates to: HLHLLAPKHLLFAQIYCLHCRGS*SFFCMT
Trigger: AGTCATGCAAAAGAAACTGCAGGATCCTCTACAATG...TAAACAATAGATTTGAGCAAATAACAAATGCTTGGGTGCAAGTAAGTGGAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR GCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCCCTTGTATTCTAAAGTaGTGTGAGGTACCCCATAAA +
Preference number: 2 (lower is better)
Translates to: EGICFITFYHYSCILHKSPCILK*CEVPHK
Trigger: TTTATGGGGTACCTCACAGCACTTTAGAATACAAGG...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTATTTGAAATTGACACTTaGCCTGACTTACGAAACTTG +
Preference number: 2 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVFEIDT*PDLRNL
Trigger: CAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTCAAA...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTATTGGTGATATCTGCCTaGGAAATCTCTCTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: TIRNTNNPTHEPTMILILLVISA*EISLPK
Trigger: TTTAGGAAGAGAGATTTCCCAGGCAGATATCACCAA...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
3UTR-3UTR CCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGTTGGTGATATCTGCCTaGGAAATCTCTCTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: SLLDSYGPRLITSFITSLLVISA*EISLPK
Trigger: TTTAGGAAGAGAGATTTCCCAGGCAGATATCACCAA...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTAAGTTTTAATCTTGCTTaGGTTCCTTTTTCTGTGGCA +
Preference number: 2 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVSFNLA*VPFSVA
Trigger: TGCCACAGAAAAAGGAACCCAAGCAAGATTAAAACT...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACGTTCAACTGAATGGCTaGAATGGTCTTTCACCAATA +
Preference number: 2 (lower is better)
Translates to: GICFITFYHYSCILHKSNVQLNG*NGLSPI
Trigger: TATTGGTGAAAGACCATTCCAGCCATTCAGTTGAAC...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTCTTTTCTATTCCTGGTaGATGCACTTGAGTGCATTT +
Preference number: 2 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGLFYSW*MHLSAF
Trigger: AAATGCACTCAAGTGCATCCACCAGGAATAGAAAAG...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCCTTTTCTATTCCTGGTaGATGCACTTGAGTGCATTT +
Preference number: 2 (lower is better)
Translates to: EGICFITFYHYSCILHKSLFYSW*MHLSAF
Trigger: AAATGCACTCAAGTGCATCCACCAGGAATAGAAAAG...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTATTTCTTTTCTATTCCTaGTGGATGCACTTGAGTGCA +
Preference number: 2 (lower is better)
Translates to: HYSCILHKSNKDTLTHILFLFYS*WMHLSA
Trigger: TGCACTCAAGTGCATCCACCAGGAATAGAAAAGAAA...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTTACGCTACCAATTTATaGGCACTATTCACTGTCAAT +
Preference number: 2 (lower is better)
Translates to: LGRCQHKCIINHEAARYIYATNL*ALFTVN
Trigger: ATTGACAGTGAATAGTGCTCATAAATTGGTAGCGTA...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTACGCTACCAATTTATaGGCACTATTCACTGTCAAT +
Preference number: 2 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHYATNL*ALFTVN
Trigger: ATTGACAGTGAATAGTGCTCATAAATTGGTAGCGTA...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTCTAGTAGCTTGCATTTaGGAAGCTTATGACTTAGAT +
Preference number: 2 (lower is better)
Translates to: LGRCQHKCIINHEAARYILVACI*EAYDLD
Trigger: ATCTAAGTCATAAGCTTCTCAAATGCAAGCTACTAG...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCCTAGTAGCTTGCATTTaGGAAGCTTATGACTTAGAT +
Preference number: 2 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSLVACI*EAYDLD
Trigger: ATCTAAGTCATAAGCTTCTCAAATGCAAGCTACTAG...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATAGGAGATACATGTGTTaGAAGGATTGTTGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHRRYMC*KDCCVE
Trigger: TTCAACACAACAATCCTTTCAACACATGTATCTCCT...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR TCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAATCTATTCAAGACCCTaGACAAACTGCAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: HYSCILHKSNKDTLTHILIYSRP*TNCKFG
Trigger: ACCAAATTTGCAGTTTGTTCAGGGTCTTGAATAGAT...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACATCTATTCAAGACCCTaGACAAACTGCAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: GICFITFYHYSCILHKSNIYSRP*TNCKFG
Trigger: ACCAAATTTGCAGTTTGTTCAGGGTCTTGAATAGAT...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR TCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 2 (lower is better)
Translates to: EGICFITFYHYSCILHKSRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR TCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCGAGGTTTTGGAAACTTaGTACATAACATCCAACAGA +
Preference number: 2 (lower is better)
Translates to: EGICFITFYHYSCILHKSEVLET*YITSNR
Trigger: TCTGTTGGATGTTATGTATCAAGTTTCCAAAACCTC...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR GCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATCCATTGCTGAAACTGTaGTTTGCACTATTAAAGGTA +
Preference number: 2 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHPLLKL*FALLKV
Trigger: TACCTTTAATAGTGCAAAGCACAGTTTCAGCAATGG...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGTGGATGCACTTGAGTaGATTTTGTATTTCATAGAA +
Preference number: 2 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTVDALE*ILYFIE
Trigger: TTCTATGAAATACAAAATGCACTCAAGTGCATCCAC...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR GCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTTTTTACCACTACAGTTaGATACTCCATAAATCCAAC +
Preference number: 2 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTFYHYS*ILHKSN
Trigger: GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAA...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR GCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 2 (lower is better)
Translates to: EGICFITFYHYSCILHKSLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTTTTACAACTGCTCATaGGTCAGGTTATCATCACAA +
Preference number: 2 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNFYNCS*VRLSSQ
Trigger: TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTGAAAGACGATGGAGGTaGAATCCTTTAAGATTATGT +
Preference number: 2 (lower is better)
Translates to: LGRCQHKCIINHEAARYIERRWR*NPLRLC
Trigger: ACATAATCTTAAAGGATTCCACCTCCATCGTCTTTC...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGAGAACAACATTTGAATaGGAAGTGCCAACTGAAGTT +
Preference number: 2 (lower is better)
Translates to: SLLDSYGPRLITSFITSLRTTFE*EVPTEV
Trigger: AACTTCAGTTGGCACTTCCCATTCAAATGTTGTTCT...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR GCA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTATGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 2 (lower is better)
Translates to: TIRNTNNPTHEPTMILILCEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
3UTR-3UTR GCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGTGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 2 (lower is better)
Translates to: SLLDSYGPRLITSFITSLCEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCCTGAAAGGTATGTCATaGATGTCTAGAATATATGGA +
Preference number: 2 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSLKGMS*MSRIYG
Trigger: TCCATATATTCTAGACATGCATGACATACCTTTCAG...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR GCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACGTGGATGCACTTGAGTaGATTTTGTATTTCATAGAA +
Preference number: 2 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNVDALE*ILYFIE
Trigger: TTCTATGAAATACAAAATGCACTCAAGTGCATCCAC...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR GCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTTTATTTATGTCCAGTaGTCCAGACTGAATGTCTTT +
Preference number: 2 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGFIYVQ*SRLNVF
Trigger: AAAGACATTCAGTCTGGAGCACTGGACATAAATAAA...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGTCTTTTGGACAGTTATaGTCCTCGTTTAATTACAAG +
Preference number: 2 (lower is better)
Translates to: SLLDSYGPRLITSFITSLSFGQL*SSFNYK
Trigger: CTTGTAATTAAACGAGGACCATAACTGTCCAAAAGA...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACACTGAATGGCTGGAATaGTCTTTCACCAATAAAAAT +
Preference number: 2 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNTEWLE*SFTNKN
Trigger: ATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGT...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR GCA 72 bp CTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTTaGCCCTACCCCTACTACCATAACTTTCAACAGCAT +
Preference number: 3 (lower is better)
Translates to: LPHLSIFFWSPP*PYPYYHNFQQH
Trigger: ATGCTGTTGAAAGTTATGGTAGTAGGGGTAGGGGCAAGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674942.1
3UTR TCA 72 bp CTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCTGCTCTTCCTGAAGGG +
Preference number: 3 (lower is better)
Translates to: LAEYFVLAFDSQ*GLRGLPALPEG
Trigger: CCCTTCAGGAAGAGCAGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGCAAGAACAAAATACTCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
ENST00000676061.1
3UTR-3UTR CAA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAACATCATCAAGAGCATTaGACTTCTTACGGCGTGTTT +
Preference number: 3 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKHHQEH*TSYGVF
Trigger: AAACACGCCGTAAGAAGTCAAATGCTCTTGATGATG...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAACATAGCCAAAACTTGTaGCTGGTGATGTATGCACAA +
Preference number: 3 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKHSQNL*LVMYAQ
Trigger: TTGTGCATACATCACCAGCAACAAGTTTTGGCTATG...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp GTCAGGCATTACTACCCTCTGCTGCAAGTCACCCCTGATCTCAGGTGGCAAAACTTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTAT +
Preference number: 3 (lower is better)
Translates to: VRHYYPLLQVTPDLRWQNFSFTN*LRGSWY
Trigger: ATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAA...GTTTTGCCACCTGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGCATGCAATTGTGCCATaGCTCTTAAAGCCCACAGAC +
Preference number: 3 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMHAIVP*LLKPTD
Trigger: GTCTGTGGGCTTTAAGAGCAATGGCACAATTGCATG...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATGCAATTGTGCCATaGCTCTTAAAGCCCACAGAC +
Preference number: 3 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYHAIVP*LLKPTD
Trigger: GTCTGTGGGCTTTAAGAGCAATGGCACAATTGCATG...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCACATGCAATTGTGCCATaGCTCTTAAAGCCCACAGAC +
Preference number: 3 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSHAIVP*LLKPTD
Trigger: GTCTGTGGGCTTTAAGAGCAATGGCACAATTGCATG...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
3UTR-3UTR CAA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCTTCTTACGGCGTGTTaGCTTTTGCCTATTAGCTGG +
Preference number: 3 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYLLTAC*LLPISW
Trigger: CCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAG...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 3 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIIGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
3UTR TCA 72 bp GCTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTTGGTGTTGACTGTGAA +
Preference number: 3 (lower is better)
Translates to: AWHSILSVLDWP*DDSSSVGVDCE
Trigger: TTCACAGTCAACACCAACAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
3UTR TCA 72 bp AGTCAGGCATTACTACCCTCTGCTGCAAGTCACCCCTaGTCTCAGGTGGCAAAACACACTGATTATCTACTA +
Preference number: 3 (lower is better)
Translates to: SQALLPSAASHP*SQVAKHTDYLL
Trigger: TAGTAGATAATCAGTGTGTTTTGCCACCTGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAATGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 3 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCATGCAATTGTGCCATaGCTCTTAAAGCCCACAGAC +
Preference number: 3 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGHAIVP*LLKPTD
Trigger: GTCTGTGGGCTTTAAGAGCAATGGCACAATTGCATG...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCCATGCAATTGTGCCATaGCTCTTAAAGCCCACAGAC +
Preference number: 3 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFHAIVP*LLKPTD
Trigger: GTCTGTGGGCTTTAAGAGCAATGGCACAATTGCATG...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACTCTTCATTCTGTTTGTaGGCTCTGTGTTCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYSSFCL*ALCSPV
Trigger: CACAGGAGAACACAGAGCCAACAAACAGAATGAAGA...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGTGTATATGGGAGTCCTaGTTTGTGAATGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGCIWES*FVNVSW
Trigger: CCAGGAAACATTCACAAACAAGGACTCCCATATACA...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGACGGCGTGTTTGCTTTaGCCTATTAGCTGGCATGGT +
Preference number: 3 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLTACLL*PISWHG
Trigger: ACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGT...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 3 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR CAA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGGTAGCACTGCTTGAATaGTCCTTAGGTTCTTCTTGT +
Preference number: 3 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGVALLE*SLGSSC
Trigger: ACAAGAAGAACCTAAGGACAATTCAAGCAGTGCTAC...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCGCTCTGCTTGAGCTCTaGCCCACAAGGCTACTTTTT +
Preference number: 3 (lower is better)
Translates to: LCFPLGEGGNILNNASSGALLEL*PTRLLF
Trigger: AAAAAGTAGCCTTGTGGGCAAGAGCTCAAGCAGAGC...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR CCA 72 bp GGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATAGCTCCTCTGTTGGTG +
Preference number: 3 (lower is better)
Translates to: GNFLLGIQSYQC*TGPEMIAPLLV
Trigger: CACCAACAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR CAA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGTCTTGTCTTTTGAAATaGACACTTGGCCTGACTTAC +
Preference number: 3 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGSCLLK*TLGLTY
Trigger: GTAAGTCAGGCCAAGTGTCAATTTCAAAAGACAAGA...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGCTTCTTACGGCGTGTTaGCTTTTGCCTATTAGCTGG +
Preference number: 3 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLLLTAC*LLPISW
Trigger: CCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAG...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAGCTCCTCTGTTGGTGTaGACTGTGAAGAATCAAGAG +
Preference number: 3 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQAPLLV*TVKNQE
Trigger: CTCTTGATTCTTCACAGTCAACACCAACAGAGGAGC...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675131.1
3UTR-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTATTCTGTGCGCTCTGCTaGAGCTCTTGCCCACAAGGC +
Preference number: 3 (lower is better)
Translates to: HYSCILHKSNKDTLTHILFCALC*SSCPQG
Trigger: GCCTTGTGGGCAAGAGCTCAAGCAGAGCGCACAGAA...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR TCA 72 bp TGTTCTTGGAAGGCTGAGGTATCACAGATTTGTTCTTaGTGGGTCTCACATATTCAAAGCCAGACCCCAAGA +
Preference number: 3 (lower is better)
Translates to: CSWKAEVSQICS*WVSHIQSQTPR
Trigger: TCTTGGGGTCTGGCTTTGAATATGTGAGACCCATCAAGAACAAATCTGTGATACCTCAGCCTTCCAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CCA 72 bp CAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTaGTTTACCATACCAAAGCTTGCTTTCTCTGGCATG +
Preference number: 3 (lower is better)
Translates to: QAIQKERSHVLM*FTIPKLAFSGM
Trigger: CATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR CCA 72 bp ACCAGGCTTCCTACTTATTGCCAAAGGCTTCTGATTTaGTCGAATAATGTTCTTGGAAGGCTGAGGTATCAC +
Preference number: 3 (lower is better)
Translates to: TRLPTYCQRLLI*SNNVLGRLRYH
Trigger: GTGATACCTCAGCCTTCCAAGAACATTATTCGACCAAATCAGAAGCCTTTGGCAATAAGTAGGAAGCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 3 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR CAA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 3 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR CAA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCACCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 3 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR CAA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCCAGAGGAGTTGCGCATaGCAAATAAAGTTTCTTGAC +
Preference number: 3 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWAQRSCA*QIKFLD
Trigger: GTCAAGAAACTTTATTTGCAATGCGCAACTCCTCTG...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGGCCATTTGTCCACTGTaGCAAGACTGTCGTTTATGT +
Preference number: 3 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLAICPL*QDCRLC
Trigger: ACATAAACGACAGTCTTGCAACAGTGGACAAATGGC...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR TCA 72 bp GCTGATCCTTCTAGGACTGAAGAGGTTTTGGAAACTTaGTACATAACATCCAACAGACCAGAACCATCAGGT +
Preference number: 3 (lower is better)
Translates to: ADPSRTEEVLET*YITSNRPEPSG
Trigger: ACCTGATGGTTCTGGTCTGTTGGATGTTATGTATCAAGTTTCCAAAACCTCTTCAGTCCTAGAAGGATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR GCA 72 bp CCATCATCAAGAGCATTTGACTTCTTACGGCGTGTTTaGTTTTGCCTATTAGCTGGCATGGTCTTTAGTACT +
Preference number: 3 (lower is better)
Translates to: PSSRAFDFLRRV*FCLLAGMVFST
Trigger: AGTACTAAAGACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAGTCAAATGCTCTTGATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR GCA 72 bp CAGTCCAGAACAGCACCTGTGAGAATTATAACTGTCTaGAATTCCTCTATTCACTACTGGCTTAACGTGTTC +
Preference number: 3 (lower is better)
Translates to: QSRTAPVRIITV*NSSIHYWLNVF
Trigger: GAACACGTTAAGCCAGTAGTGAATAGAGGAATTGCAGACAGTTATAATTCTCACAGGTGCTGTTCTGGACTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR GCA 72 bp GCCAGACCCCAAGATCTCACTTTCAGTAGTCAAGCTTaGTACAGCACTTATTCTTTCACCCAAGTCAATTTT +
Preference number: 3 (lower is better)
Translates to: ARPQDLTFSSQA*YSTYSFTQVNF
Trigger: AAAATTGACTTGGGTGAAAGAATAAGTGCTGTAGCAAGCTTGACTACTGAAAGTGAGATCTTGGGGTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCATTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTAT +
Preference number: 3 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPFSFTN*LRGSWY
Trigger: ATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAA...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCTTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTAT +
Preference number: 3 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIIFSFTN*LRGSWY
Trigger: ATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAA...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
3UTR-3UTR CAA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACTGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 3 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCCTGACTTACGAAACTaGTACTATATGAAATTGGTC +
Preference number: 3 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYPDLRN*YYMKLV
Trigger: GACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGCGCTTCCACGTTACTTaGGCCTGTATTAAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMRFHVT*ACIKAV
Trigger: TACTGCTTTAATACAGGCCAAAGTAACGTGGAAGCG...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCACTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 3 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
3UTR-3UTR CAA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCATGCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 3 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSCLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGCA...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510451.5
3UTR-3UTR CAA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACAGAGATTTTCACTTTaGCCGGTCTACCAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVQRFSL*PVYQAS
Trigger: GGAAGCCTGGTAGACCGGCAAAAGTGAAAATCTCTG...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCTATTTCATGATCATATaGCCGATAGCGGCCACGTTT +
Preference number: 3 (lower is better)
Translates to: LCFPLGEGGNILNNASSGYFMII*PIAATF
Trigger: AAACGTGGCCGCTATCGGCAATATGATCATGAAATA...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR GCA 72 bp TTTCACTTTTGCCGGTCTACCAGGCTTCCTACTTATTaGCAAAGGCTTCTGATTTGGTCGAATAATGTTCTT +
Preference number: 3 (lower is better)
Translates to: FHFCRSTRLPTY*QRLLIWSNNVL
Trigger: AAGAACATTATTCGACCAAATCAGAAGCCTTTGGCAATAAGTAGGAAGCCTGGTAGACCGGCAAAAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCTGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 3 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCTCTTCATTCTGTTTGTaGGCTCTGTGTTCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPSSFCL*ALCSPV
Trigger: CACAGGAGAACACAGAGCCAACAAACAGAATGAAGA...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAATGTTCTTCATTCTGTTaGTTGGCTCTGTGTTCTCCT +
Preference number: 3 (lower is better)
Translates to: LERSLSITSEEDQYNVQQCSSFC*LALCSP
Trigger: AGGAGAACACAGAGCCAACAAACAGAATGAAGAACA...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCTTACGGCGTGTTaGCTTTTGCCTATTAGCTGG +
Preference number: 3 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVLLTAC*LLPISW
Trigger: CCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAG...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCCAAATAACTGCTTGGTaGTGTAGTTTCTCACTCTTC +
Preference number: 3 (lower is better)
Translates to: LCFPLGEGGNILNNASSGQITAW*CSFSLF
Trigger: GAAGAGTGAGAAACTACACAACCAAGCAGTTATTTG...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 3 (lower is better)
Translates to: LCFPLGEGGNILNNASSGLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CAA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATACAACATAGCCAAAACTaGTTGCTGGTGATGTATGCA +
Preference number: 3 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKIQHSQN*LLVMYA
Trigger: TGCATACATCACCAGCAACAAGTTTTGGCTATGTTG...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp TTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATTGTCTTTCAAAGCTTTaGAGAGCAAACCATCTGCAA +
Preference number: 3 (lower is better)
Translates to: LQLPVPESVILYNPVSGNCLSKL*RANHLQ
Trigger: TTGCAGATGGTTTGCTCTCAAAAGCTTTGAAAGACA...ATTACCAGACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CAA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGTAATCTACACAGGCTaGCTGCTGTTTTTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTVIYTG*LLFLQL
Trigger: CAGCTGCAAAAACAGCAGCAAGCCTGTGTAGATTAC...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CAA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCCATGCAATTGTGCCATaGCTCTTAAAGCCCACAGAC +
Preference number: 3 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSHAIVP*LLKPTD
Trigger: GTCTGTGGGCTTTAAGAGCAATGGCACAATTGCATG...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATTCTTCATTCTGTTTGTaGGCTCTGTGTTCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNSSFCL*ALCSPV
Trigger: CACAGGAGAACACAGAGCCAACAAACAGAATGAAGA...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTGTTCTTCATTCTGTTaGTTGGCTCTGTGTTCTCCT +
Preference number: 3 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLCSSFC*LALCSP
Trigger: AGGAGAACACAGAGCCAACAAACAGAATGAAGAACA...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACGCTTCCACGTTACTTaGGCCTGTATTAAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVRFHVT*ACIKAV
Trigger: TACTGCTTTAATACAGGCCAAAGTAACGTGGAAGCG...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCCAACGCTTTATGCTATaGACTACTAAAGAAAACCTG +
Preference number: 3 (lower is better)
Translates to: LCFPLGEGGNILNNASSGQRFML*TTKENL
Trigger: CAGGTTTTCTTTAGTAGTCAATAGCATAAAGCGTTG...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCACTTTGATTGGTTGCTaGACATACATACAACAAGTG +
Preference number: 3 (lower is better)
Translates to: LCFPLGEGGNILNNASSGTLIGC*TYIQQV
Trigger: CACTTGTTGTATGTATGTCAAGCAACCAATCAAAGT...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp TGCTGTTTTTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTGCACTTGAGTGCATTTaGTATTTCATAGAATGCACT +
Preference number: 3 (lower is better)
Translates to: CCFCSCQSLNLSYYITQCALECI*YFIECT
Trigger: AGTGCATTCTATGAAATACAAAATGCACTCAAGTGC...ACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAAAAACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CAA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 3 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
3UTR-3UTR CAA 90 bp TTGTTTAATTCCTCTAATAAGGAATCATTTGAAGCAGAAGTAGCCCACCACCTGCATTTGAGTGCACTGTaGGTCATACTTTTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: LFNSSNKESFEAEVAHHLHLSAL*VILFFR
Trigger: CCTGAAGAAAAGTATGACCAACAGTGCACTCAAATG...CAGGTGGTGGGCTACTTCTGCTTCAAATGATTCCTTATTAGAGGAATTAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 3 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675131.1
3UTR-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTACCACAAGGCTACTTTTaGCAGCACTGCACAAGTTTC +
Preference number: 3 (lower is better)
Translates to: HYSCILHKSNKDTLTHILPQGYF*QHCTSF
Trigger: GAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTGG...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR TCA 72 bp CTAAAGGGCTCATTCTGGCAAACAGTGATGTTTGTTTaGTCAATTTTAGGCTTTGGTGGTCTTCCAATTGGT +
Preference number: 3 (lower is better)
Translates to: LKGSFWQTVMFV*SILGFGGLPIG
Trigger: ACCAATTGGAAGACCACCAAAGCCTAAAATTGATCAAACAAACATCACTGTTTGCCAGAATGAGCCCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR GCA 72 bp TCAAGAGCATTTGACTTCTTACGGCGTGTTTGCTTTTaGCTATTAGCTGGCATGGTCTTTAGTACTATCTTT +
Preference number: 3 (lower is better)
Translates to: SRAFDFLRRVCF*LLAGMVFSTIF
Trigger: AAAGATAGTACTAAAGACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAGTCAAATGCTCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR CCA 72 bp ACTCTTATTGCTGCTGATTTCTGCTGGTGTGAGAGATaGAGGCTGGTTAATGTTTGCTTCAAGTTTGTTATT +
Preference number: 3 (lower is better)
Translates to: TLIAADFCWCER*RLVNVCFKFVI
Trigger: AATAACAAACTTGAAGCAAACATTAACCAGCCTCCATCTCTCACACCAGCAGAAATCAGCAGCAATAAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CCA 72 bp TGTTTGATCAATTTTAGGCTTTGGTGGTCTTCCAATTaGTCGCTTAATCTGTTTCACAACTTGGGGACCTAT +
Preference number: 3 (lower is better)
Translates to: CLINFRLWWSSN*SLNLFHNLGTY
Trigger: ATAGGTCCCCAAGTTGTGAAACAGATTAAGCGACCAATTGGAAGACCACCAAAGCCTAAAATTGATCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCTGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 3 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATATGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 3 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKIWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGTCTTCATTCTGTTTGTaGGCTCTGTGTTCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: SLLDSYGPRLITSFITSLSSFCL*ALCSPV
Trigger: CACAGGAGAACACAGAGCCAACAAACAGAATGAAGA...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCTGTATATGGGAGTCCTaGTTTGTGAATGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSCIWES*FVNVSW
Trigger: CCAGGAAACATTCACAAACAAGGACTCCCATATACA...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATCGCTTCCACGTTACTTaGGCCTGTATTAAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHRFHVT*ACIKAV
Trigger: TACTGCTTTAATACAGGCCAAAGTAACGTGGAAGCG...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTCGCTTCCACGTTACTTaGGCCTGTATTAAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: LGRCQHKCIINHEAARYIRFHVT*ACIKAV
Trigger: TACTGCTTTAATACAGGCCAAAGTAACGTGGAAGCG...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTTCCTGGTGGATGCACTaGAGTGCATTTTGTATTTCA +
Preference number: 3 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTSWWMH*SAFCIS
Trigger: TGAAATACAAAATGCACTCAAGTGCATCCACCAGGA...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTTTCGCTTTTGAGATTTaGGTTATGAACTGTACAGCT +
Preference number: 3 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVFAFEI*VMNCTA
Trigger: AGCTGTACAGTTCATAACCAAAATCTCAAAAGCGAA...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
3UTR TCA 72 bp TTGACACTTGGCCTGACTTACGAAACTTGTACTATATaGAATTGGTCCTCTTTTCTGCAATACCCAACGAAA +
Preference number: 3 (lower is better)
Translates to: LTLGLTYETCTI*NWSSFLQYPTK
Trigger: TTTCGTTGGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR TCA 72 bp AGTCTTTTGTTATTCAAATCCACTGTAGGCATGCAGTaGCTATTGATAATATTGCCGGATGCTACCACAGAT +
Preference number: 3 (lower is better)
Translates to: SLLLFKSTVGMQ*LLIILPDATTD
Trigger: ATCTGTGGTAGCATCCGGCAATATTATCAATAGTCACTGCATGCCTACAGTGGATTTGAATAACAAAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR TCA 72 bp CAAGCAGCTGCTAATACTTACTTCTCTTTCCTGAGGTaGAGTTCTATTAATAGTCACAGATATGCCAGAGAT +
Preference number: 3 (lower is better)
Translates to: QAAANTYFSFLR*SSINSHRYARD
Trigger: ATCTCTGGCATATCTGTGACTATTAATAGAACTTCACCTCAGGAAAGAGAAGTAAGTATTAGCAGCTGCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CCA 72 bp GCAAACAGTGATGTTTGTTTGATCAATTTTAGGCTTTaGTGGTCTTCCAATTGGTCGCTTAATCTGTTTCAC +
Preference number: 3 (lower is better)
Translates to: ANSDVCLINFRL*WSSNWSLNLFH
Trigger: GTGAAACAGATTAAGCGACCAATTGGAAGACCACCAAAGCCTAAAATTGATCAAACAAACATCACTGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCTGTTCTTCATTCTGTTaGTTGGCTCTGTGTTCTCCT +
Preference number: 3 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSCSSFC*LALCSP
Trigger: AGGAGAACACAGAGCCAACAAACAGAATGAAGAACA...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCCCTGACTTACGAAACTaGTACTATATGAAATTGGTC +
Preference number: 3 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPPDLRN*YYMKLV
Trigger: GACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTTCTTGTCTTTTGAAATaGACACTTGGCCTGACTTAC +
Preference number: 3 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCSCLLK*TLGLTY
Trigger: GTAAGTCAGGCCAAGTGTCAATTTCAAAAGACAAGA...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTGTATATGGGAGTCCTaGTTTGTGAATGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNCIWES*FVNVSW
Trigger: CCAGGAAACATTCACAAACAAGGACTCCCATATACA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTTCAAAGAAATCTCTTTaGGACAGTTATGGTCCTCGT +
Preference number: 3 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFSKKSL*DSYGPR
Trigger: ACGAGGACCATAACTGTCCAAAAGAGATTTCTTTGA...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTAGAGTCTCCACAGACTTaGTGCTATAGCAATAATAGA +
Preference number: 3 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVESPQT*CYSNNR
Trigger: TCTATTATTGCTATAGCACAAAGTCTGTGGAGACTC...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACCAACGCTTTATGCTATaGACTACTAAAGAAAACCTG +
Preference number: 3 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDQRFML*TTKENL
Trigger: CAGGTTTTCTTTAGTAGTCAATAGCATAAAGCGTTG...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTATCCTGGTGGATGCACTaGAGTGCATTTTGTATTTCA +
Preference number: 3 (lower is better)
Translates to: HYSCILHKSNKDTLTHILSWWMH*SAFCIS
Trigger: TGAAATACAAAATGCACTCAAGTGCATCCACCAGGA...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACCCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 3 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
3UTR-3UTR CAA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTATCACTGGATCGTTTTTaGTTGTGGATTCGGATACTT +
Preference number: 3 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVSLDRF*LWIRIL
Trigger: AAGTATCCGAATCCACAACAAAAAACGATCCAGTGA...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp TTGTTTAATTCCTCTAATAAGGAATCATTTGAAGCAGAAGTAGCCCACCACCTGCAGTACCTTCATATTTaGCTGGTACATTTTCAACAC +
Preference number: 3 (lower is better)
Translates to: LFNSSNKESFEAEVAHHLQYLHI*LVHFQH
Trigger: GTGTTGAAAATGTACCAGCAAAATATGAAGGTACTG...CAGGTGGTGGGCTACTTCTGCTTCAAATGATTCCTTATTAGAGGAATTAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACGCGAAAGTCTGTTTCTaGGGGTATCTTTGTAAGCTA +
Preference number: 3 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNAKVCF*GYLCKL
Trigger: TAGCTTACAAAGATACCCCAAGAAACAGACTTTCGC...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCAAAATAGTTTGCCATTaGTCCACTGTTGCAAGACTG +
Preference number: 3 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSKIVCH*STVARL
Trigger: CAGTCTTGCAACAGTGGACAAATGGCAAACTATTTT...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR TCA 72 bp ACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTaGAAGGATTGTTGTGTTGAAGACAAAGGATTTAGT +
Preference number: 3 (lower is better)
Translates to: TKMARTSRRYMC*KDCCVEDKGFS
Trigger: ACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR GCA 72 bp GTCTCTCTTATGAGTCTAGTAAAAGTTAAAATGCACTaGCCAGCTTCTAACTACCCAATTAGTAGAGAGTTT +
Preference number: 3 (lower is better)
Translates to: VSLMSLVKVKMH*PASNYPISREF
Trigger: AAACTCTCTACTAATTGGGTAGTTAGAAGCTGGGCAGTGCATTTTAACTTTTACTAGACTCATAAGAGAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR GCA 72 bp TATCAGCTTCAGTGTGCCTTATTTTATCCATTTGAGTaGACTGTTGGTCATACTTTTCTTCAGGCAGATTTT +
Preference number: 3 (lower is better)
Translates to: YQLQCALFYPFE*TVGHTFLQADF
Trigger: AAAATCTGCCTGAAGAAAAGTATGACCAACAGTGCACTCAAATGGATAAAATAAGGCACACTGAAGCTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCCCTGACTTACGAAACTaGTACTATATGAAATTGGTC +
Preference number: 3 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSPDLRN*YYMKLV
Trigger: GACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTTCTTGTCTTTTGAAATaGACACTTGGCCTGACTTAC +
Preference number: 3 (lower is better)
Translates to: LGRCQHKCIINHEAARYISCLLK*TLGLTY
Trigger: GTAAGTCAGGCCAAGTGTCAATTTCAAAAGACAAGA...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTCAAAGAAATCTCTTTaGGACAGTTATGGTCCTCGT +
Preference number: 3 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNSKKSL*DSYGPR
Trigger: ACGAGGACCATAACTGTCCAAAAGAGATTTCTTTGA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATGAGTCTCCACAGACTTaGTGCTATAGCAATAATAGA +
Preference number: 3 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHESPQT*CYSNNR
Trigger: TCTATTATTGCTATAGCACAAAGTCTGTGGAGACTC...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTCAACGCTTTATGCTATaGACTACTAAAGAAAACCTG +
Preference number: 3 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTQRFML*TTKENL
Trigger: CAGGTTTTCTTTAGTAGTCAATAGCATAAAGCGTTG...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCATTTGGAAAAATAGTTaGCCATTTGTCCACTGTTGC +
Preference number: 3 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSIWKNS*PFVHCC
Trigger: GCAACAGTGGACAAATGGCAAACTATTTTTCCAAAT...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR-3UTR CAA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTTTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTAT +
Preference number: 3 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLFSFTN*LRGSWY
Trigger: ATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAA...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
3UTR-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTAT +
Preference number: 3 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNFSFTN*LRGSWY
Trigger: ATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCCCTGACTTACGAAACTaGTACTATATGAAATTGGTC +
Preference number: 3 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSPDLRN*YYMKLV
Trigger: GACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR-3UTR CAA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCACTTTGATTGGTTGCTaGACATACATACAACAAGTG +
Preference number: 3 (lower is better)
Translates to: EGICFITFYHYSCILHKSTLIGC*TYIQQV
Trigger: CACTTGTTGTATGTATGTCAAGCAACCAATCAAAGT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAACTTTGATTGGTTGCTaGACATACATACAACAAGTG +
Preference number: 3 (lower is better)
Translates to: HYSCILHKSNKDTLTHILTLIGC*TYIQQV
Trigger: CACTTGTTGTATGTATGTCAAGCAACCAATCAAAGT...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAGCACTTGAGTGCATTTaGTATTTCATAGAATGCACT +
Preference number: 3 (lower is better)
Translates to: HYSCILHKSNKDTLTHILALECI*YFIECT
Trigger: AGTGCATTCTATGAAATACAAAATGCACTCAAGTGC...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACGCACTTGAGTGCATTTaGTATTTCATAGAATGCACT +
Preference number: 3 (lower is better)
Translates to: GICFITFYHYSCILHKSNALECI*YFIECT
Trigger: AGTGCATTCTATGAAATACAAAATGCACTCAAGTGC...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
3UTR-3UTR CAA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCCTTGCACCCAAGCATTaGTTATTTGCTCAAATCTAT +
Preference number: 3 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSLAPKH*LFAQIY
Trigger: ATAGATTTGAGCAAATAACAAATGCTTGGGTGCAAG...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR TCA 72 bp AACAGACCACATAAATCATCTTCGATTAAGGGCTTTTaGGATTCTGAAGACACAACACATGATGTATTACAA +
Preference number: 3 (lower is better)
Translates to: NRPHKSSSIKGF*DSEDTTHDVLQ
Trigger: TTGTAATACATCATGTGTTGTGTCTTCAGAATCTCAAAAGCCCTTAATCGAAGATGATTTATGTGGTCTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CCA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTCAGTGCATGAGGCGGTaGCGCCAAGAGTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPQCMRR*RQESSS
Trigger: GGAACTCGACTCTTGGCGCCACCGCCTCATGCACTG...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR TCA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR TCA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR GCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGCTTCCCTTGTCCATCTaGGTCCCGCGTCACGCGCCC +
Preference number: 4 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMLPLSI*VPRHAP
Trigger: GGGCGCGTGACGCGGGACGCAGATGGACAAGGGAAG...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR GCA 90 bp TCAATGGGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTACTTCCCTTGTCCATCTaGGTCCCGCGTCACGCGCCC +
Preference number: 4 (lower is better)
Translates to: SMGRLRHILMGLKGQLAVLPLSI*VPRHAP
Trigger: GGGCGCGTGACGCGGGACGCAGATGGACAAGGGAAG...TACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000675131.1
CDS-3UTR GCA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTAGTGGGGCTGAGCACTaGGAGTGTGTTTTGTGCACA +
Preference number: 4 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPSGAEH*ECVLCT
Trigger: TGTGCACAAAACACACTCGCAGTGCTCAGCCCCACT...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR GCA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTTTCTGGTCACCACCTTaGCCCTACCCCTACTACCAT +
Preference number: 4 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPFWSPP*PYPYYH
Trigger: ATGGTAGTAGGGGTAGGGGCAAGGTGGTGACCAGAA...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR GCA 90 bp GTCAGGCATTACTACCCTCTGCTGCAAGTCACCCCTGATCTCAGGTGGCAAAACGGCATTACTACCCTCTaGTGCAAGTCACCCCTGATC +
Preference number: 4 (lower is better)
Translates to: VRHYYPLLQVTPDLRWQNGITTL*CKSPLI
Trigger: GATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCC...GTTTTGCCACCTGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CCA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTCTCAGTATCTTCTTCTaGTCACCACCTTGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPLSIFF*SPPCPY
Trigger: GTAGGGGCAAGGTGGTGACCAGAAGAAGATACTGAG...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR TCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACAACCTACACAGTGCATaGGGCGGTGGCGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHNLHSA*GGGAKS
Trigger: ACTCTTGGCGCCACCGCCTCATGCACTGTGTAGGTT...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675605.1
CDS-3UTR CCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCACAGTGCATGAGGCGGTaGCGCCAAGAGTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSQCMRR*RQESSS
Trigger: GGAACTCGACTCTTGGCGCCACCGCCTCATGCACTG...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR TCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAAACCTACACAGTGCATaGGGCGGTGGCGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSNLHSA*GGGAKS
Trigger: ACTCTTGGCGCCACCGCCTCATGCACTGTGTAGGTT...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675605.1
CDS-3UTR TCA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCAACCTACACAGTGCATaGGGCGGTGGCGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGNLHSA*GGGAKS
Trigger: ACTCTTGGCGCCACCGCCTCATGCACTGTGTAGGTT...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGIQSYQCWTGPEMIAPLAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...CAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
CDS-3UTR GCA 90 bp GTCAGGCATTACTACCCTCTGCTGCAAGTCACCCCTGATCTCAGGTGGCAAAACTTCTTACGGCGTGTTTaGTTTTGCCTATTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VRHYYPLLQVTPDLRWQNFLRRV*FCLLAG
Trigger: GCCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAA...GTTTTGCCACCTGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CCA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR TCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR TCA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIIAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR TCA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCAGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR GCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTCTTCCCTTGTCCATCTaGGTCCCGCGTCACGCGCCC +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTLPLSI*VPRHAP
Trigger: GGGCGCGTGACGCGGGACGCAGATGGACAAGGGAAG...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382226.5
CDS-3UTR GCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATCTTCCCTTGTCCATCTaGGTCCCGCGTCACGCGCCC +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNLPLSI*VPRHAP
Trigger: GGGCGCGTGACGCGGGACGCAGATGGACAAGGGAAG...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAAACCCCTGATCTCAGGTaGCAAAACACACTGATTATC +
Preference number: 4 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKTPDLR*QNTLII
Trigger: GATAATCAGTGTGTTTTGCCACCTGAGATCAGGGGT...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGAACCTACACAGTGCATaGGGCGGTGGCGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMNLHSA*GGGAKS
Trigger: ACTCTTGGCGCCACCGCCTCATGCACTGTGTAGGTT...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCAGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR GCA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR GCA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCAACTCTCAAAACACAGTaGATGAGGCGGTGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSTLKTQ*MRRWRQ
Trigger: TTGGCGCCACCGCCTCATGCACTGTGTTTTGAGAGT...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675131.1
CDS-3UTR TCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KYLETKQHISRQGLAMLPAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR TCA 90 bp CTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGAAGGACAGAGAAAAGTaGCAGTTTCAGCTAGGACGA +
Preference number: 4 (lower is better)
Translates to: LGIQSYQCWTGPEMIAPLKDREK*QFQLGR
Trigger: TCGTCCTAGCTGAAACTGTCACTTTTCTCTGTCCTT...CAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
CDS-3UTR TCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAATCGATTAAGGGCTTTTaGGATTCTGAAGACACAACA +
Preference number: 4 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKSIKGF*DSEDTT
Trigger: TGTTGTGTCTTCAGAATCTCAAAAGCCCTTAATCGA...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGGCTGCAAGTCACCCCTaGTCTCAGGTGGCAAAACAC +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLAASHP*SQVAKH
Trigger: GTGTTTTGCCACCTGAGATCAGGGGTGACTTGCAGC...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR GCA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAGATTTTCTGCTGTaGGCTTCCACGTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWEDFLL*ASTLLW
Trigger: CCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTC...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCCGGCGTGTTTGCTTTTaGCTATTAGCTGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGRRVCF*LLAGMV
Trigger: GACCATGCCAGCTAATAGGCAAAAGCAAACACGCCG...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCACGGCGTGTTTGCTTTTaGCTATTAGCTGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSRRVCF*LLAGMV
Trigger: GACCATGCCAGCTAATAGGCAAAAGCAAACACGCCG...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
CDS-3UTR GCA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGTTCTTACGGCGTGTTTaGTTTTGCCTATTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWFLRRV*FCLLAG
Trigger: GCCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAA...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GTCAGGCATTACTACCCTCTGCTGCAAGTCACCCCTGATCTCAGGTGGCAAAACACTGATTATCTACTATaGTTTTTCCTTGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: VRHYYPLLQVTPDLRWQNTDYLL*FFLGVG
Trigger: TCCCACTCCAAGGAAAAAGCATAGTAGATAATCAGT...GTTTTGCCACCTGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACCAGTGCATGAGGCGGTaGCGCCAAGAGTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYQCMRR*RQESSS
Trigger: GGAACTCGACTCTTGGCGCCACCGCCTCATGCACTG...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAATTGGTGATATCTGCCTaGGAAATCTCTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKLVISA*EISLPK
Trigger: TTTAGGAAGAGAGATTTCCCAGGCAGATATCACCAA...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACTGCTGGTGTGAGAGATaGAGGCTGGTTAATGTTTGC +
Preference number: 4 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYCWCER*RLVNVC
Trigger: GCAAACATTAACCAGCCTCCATCTCTCACACCAGCA...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCCAGTCAACTGTTCCATaGTTGTGCAGCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIIQSTVP*LCSFPS
Trigger: AGAGGGAAAGCTGCACAACCATGGAACAGTTGACTG...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTATATTCTTCAGAAAATaGTTTGGAAGGACTGAACAC +
Preference number: 4 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPIFFRK*FGRTEH
Trigger: GTGTTCAGTCCTTCCAAACCATTTTCTGAAGAATAT...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674942.1
3UTR CAA 72 bp CAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAATCAAGAGATGGTATAC +
Preference number: 4 (lower is better)
Translates to: QCWTGPEMIAPL*VLTVKNQEMVY
Trigger: GTATACCATCTCTTGATTCTTCACAGTCAACACCAACAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675131.1
CDS-3UTR TCA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCAAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR TCA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAAGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LERSLSITSEEDQYNVQQVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp ATCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IPKYLETKQHISRQGLAMVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...CATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR TCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAACTAGTAGCTTGCATTTaGGAAGCTTATGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKLVACI*EAYDLD
Trigger: ATCTAAGTCATAAGCTTCTCAAATGCAAGCTACTAG...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCAGATTTATCACAATCTaGGGTGGGCCTAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIIRFITI*GGPRNL
Trigger: GAGATTCCTAGGCCCACCTCAGATTGTGATAAATCT...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGAAGGACAGAGAAAAGTaGCAGTTTCAGCTAGGACGA +
Preference number: 4 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMKDREK*QFQLGR
Trigger: TCGTCCTAGCTGAAACTGTCACTTTTCTCTGTCCTT...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAATTCTCTTTCCTGAGGTaGAGTTCTATTAATAGTCAC +
Preference number: 4 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKFSFLR*SSINSH
Trigger: GTGACTATTAATAGAACTTCACCTCAGGAAAGAGAA...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp TCAATGGGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTAGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: SMGRLRHILMGLKGQLAVAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...TACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR GCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAATTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAACCATTGCTGAAACTGTaGTTTGCACTATTAAAGGTA +
Preference number: 4 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKPLLKL*FALLKV
Trigger: TACCTTTAATAGTGCAAAGCACAGTTTCAGCAATGG...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGTACCATACCAAAGCTTaGTTTCTCTGGCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: LGIQSYQCWTGPEMIAPLYHTKA*FLWHGK
Trigger: TTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTA...CAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
CDS-3UTR GCA 90 bp GTCAGGCATTACTACCCTCTGCTGCAAGTCACCCCTGATCTCAGGTGGCAAAACCTGAAAGGTATGTCATaGATGTCTAGAATATATGGA +
Preference number: 4 (lower is better)
Translates to: VRHYYPLLQVTPDLRWQNLKGMS*MSRIYG
Trigger: TCCATATATTCTAGACATGCATGACATACCTTTCAG...GTTTTGCCACCTGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR GCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCTCTACACAGGCTTGCTaGTGTTTTTGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGSTQAC*CFCSCQ
Trigger: CTGGCAGCTGCAAAAACAGCAGCAAGCCTGTGTAGA...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGCCTGTGGCTTTCTTATaGTCATTTTCTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMPVAFL*SFSQGK
Trigger: CTTCCCCTGAGAAAATGAGCATAAGAAAGCCACAGG...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAATTCAGTAGTCAAGCTTaGTACAGCACTTATTCTTTC +
Preference number: 4 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKFSSQA*YSTYSF
Trigger: GAAAGAATAAGTGCTGTAGCAAGCTTGACTACTGAA...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGGGCATTACTACCCTCTaGTGCAAGTCACCCCTGATC +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLGITTL*CKSPLI
Trigger: GATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCC...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACCAGTGCATGAGGCGGTaGCGCCAAGAGTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNQCMRR*RQESSS
Trigger: GGAACTCGACTCTTGGCGCCACCGCCTCATGCACTG...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATCAGTGCATGAGGCGGTaGCGCCAAGAGTCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHQCMRR*RQESSS
Trigger: GGAACTCGACTCTTGGCGCCACCGCCTCATGCACTG...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGAATCCCATTCACACATaGCCAGGCTATCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWNPIHT*PGYPKR
Trigger: TCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATT...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCAGTCAACTGTTCCATaGTTGTGCAGCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGQSTVP*LCSFPS
Trigger: AGAGGGAAAGCTGCACAACCATGGAACAGTTGACTG...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACCTACACAGTGCATaGGGCGGTGGCGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSNLHSA*GGGAKS
Trigger: ACTCTTGGCGCCACCGCCTCATGCACTGTGTAGGTT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp TCAATGGGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTAATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: SMGRLRHILMGLKGQLAVMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...TACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCCCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR TCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGCATTTGAGAAGCTTATaGCTTAGATGGGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGHLRSL*LRWAES
Trigger: TGATTCTGCCCATCTAAGTCATAAGCTTCTCAAATG...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCAGATGTGACTCCTCTTTaGTCTTCAGTTAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPDVTPL*SSVSKL
Trigger: GAGTTTGCTAACTGAAGATCAAAGAGGAGTCACATC...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCAAGGACAGAGAAAAGTaGCAGTTTCAGCTAGGACGA +
Preference number: 4 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWAKDREK*QFQLGR
Trigger: TCGTCCTAGCTGAAACTGTCACTTTTCTCTGTCCTT...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCGAGTCAACACTTGAGTaGGTTACAGGCCCAGAACAT +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGESTLE*VTGPEH
Trigger: ATGTTCTGGGCCTGTAACTCACTCAAGTGTTGACTC...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGGAGTCAACACTTGAGTaGGTTACAGGCCCAGAACAT +
Preference number: 4 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQESTLE*VTGPEH
Trigger: ATGTTCTGGGCCTGTAACTCACTCAAGTGTTGACTC...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR TCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAATCCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSILQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGGAT...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510451.5
ENST00000637787.1
CDS-3UTR TCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAGGACTACGAAAGGCTaGTTTTGTAGAGTGAATGTT +
Preference number: 4 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGRTTKG*FCRVNV
Trigger: AACATTCACTCTACAAAATCAGCCTTTCGTAGTCCT...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTGCTGCAAGTCACCCCTaGTCTCAGGTGGCAAAACAC +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFAASHP*SQVAKH
Trigger: GTGTTTTGCCACCTGAGATCAGGGGTGACTTGCAGC...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACGCTGCAAGTCACCCCTaGTCTCAGGTGGCAAAACAC +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYAASHP*SQVAKH
Trigger: GTGTTTTGCCACCTGAGATCAGGGGTGACTTGCAGC...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCAAGTCTTGGTCCCTTTTaGAAGTCTTTTTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPSLGPF*KSFWLQ
Trigger: TTGCAGCCAAAAAGACTTTCAAAAGGGACCAAGACT...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATGTAGGTCAGTGGGGCTaGGCACTGCGAGTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: PASTELNHGFKRFQVSTYVGQWG*ALRVCF
Trigger: AAAACACACTCGCAGTGCTCAGCCCCACTGACCTAC...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR TCA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTTCAAAACACAGTGCATaGGGCGGTGGCGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCSKHSA*GGGAKS
Trigger: ACTCTTGGCGCCACCGCCTCATGCACTGTGTTTTGA...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675131.1
CDS-3UTR GCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR GCA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR GCA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIIHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR GCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGGCTGAAACTGTGCTTTaGACTATTAAAGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGAETVL*TIKGRE
Trigger: TTCCCTACCTTTAATAGTGCAAAGCACAGTTTCAGC...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GGAAGTACCACAAACTGGCTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCTCTGTGTTCTCCTGTaGTTCAGATTCCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: GSTTNWLERSLSITSEEDLCVLL*FRFLMC
Trigger: ACACATAAGGAATCTGAAGCACAGGAGAACACAGAG...GTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACAGTCCAGAAAAAGTGTaGATCAGTCAGTCACACAGA +
Preference number: 4 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYSPEKV*ISQSHR
Trigger: TCTGTGTGACTGACTGATGCACACTTTTTCTGGACT...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCGGCGTGTTTGCTTTTaGCTATTAGCTGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFRRVCF*LLAGMV
Trigger: GACCATGCCAGCTAATAGGCAAAAGCAAACACGCCG...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATGAGCACCAAATGATCTaGCCGCCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: PASTELNHGFKRFQVSTYEHQMI*PPWPPK
Trigger: TTTGGGAGGCCAAGGCGGGCAGATCATTTGGTGCTC...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR CCA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCACAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CCA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGAGCCATGTTCTCATGTaGTTTACCATACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWSHVLM*FTIPKL
Trigger: AAGCTTTGGTATGGTAAACCACATGAGAACATGGCT...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp TCAATGGGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTAAATCCCATTCACACATaGCCAGGCTATCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: SMGRLRHILMGLKGQLAVNPIHT*PGYPKR
Trigger: TCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATT...TACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCCCATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGTTGGTGATATCTGCCTaGGAAATCTCTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGLVISA*EISLPK
Trigger: TTTAGGAAGAGAGATTTCCCAGGCAGATATCACCAA...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR TCA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675131.1
ENST00000676061.1
CDS-3UTR TCA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: KYLETKQHISRQGLAMLPSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR TCA 90 bp TCAATGGGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTACATTTGAGAAGCTTATaGCTTAGATGGGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: SMGRLRHILMGLKGQLAVHLRSL*LRWAES
Trigger: TGATTCTGCCCATCTAAGTCATAAGCTTCTCAAATG...TACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCCCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
CDS-3UTR TCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGAAGGACAGAGAAAAGTaGCAGTTTCAGCTAGGACGA +
Preference number: 4 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLKDREK*QFQLGR
Trigger: TCGTCCTAGCTGAAACTGTCACTTTTCTCTGTCCTT...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTAGAGGGAATTGCAGTTaGATGGGGATGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGRGNCS*MGMGGG
Trigger: CCCACCTCCCATCCCCATTCAACTGCAATTCCCTCT...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382224.5
CDS-3UTR TCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACCTGTACAGTAGGATTTaGAGTTTCATATTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHLYSRI*SFILEA
Trigger: AGCCTCCAATATGAAACTTCAAATCCTACTGTACAG...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR TCA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGTTCAGAGTTCGCATTTaGGATATCCTCATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWFRVRI*DILICF
Trigger: GAAACAAATGAGGATATCTCAAATGCGAACTCTGAA...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGCTTTTCCACCTTTCATaGTGCAACCTCTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMLFHLS*CNLLNS
Trigger: TGAGTTTAAGAGGTTGCATCATGAAAGGTGGAAAAG...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACTTGTTGACATTTCTGTaGTCTTCCATGGTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHLLTFL*SSMVVF
Trigger: AAAGACCACCATGGAAGATCACAGAAATGTCAACAA...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATATGGTTTGGAAGGACTaGACACAGGAGCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: PASTELNHGFKRFQVSTYMVWKD*TQEHLQ
Trigger: CTGCAGGTGCTCCTGTGTTCAGTCCTTCCAAACCAT...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR TCA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGTTAGGATCACAGTTCTaGGGAAGATCCAACCATTGG +
Preference number: 4 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQLGSQF*GRSNHW
Trigger: CCAATGGTTGGATCTTCCTCAGAACTGTGATCCTAA...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR GCA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR GCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGCCATTGCTGAAACTGTaGTTTGCACTATTAAAGGTA +
Preference number: 4 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGPLLKL*FALLKV
Trigger: TACCTTTAATAGTGCAAAGCACAGTTTCAGCAATGG...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACATTTTTGGTGATATCTaGCTGGGAAATCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHIFGDI*LGNLSS
Trigger: GGAAGAGAGATTTCCCAGGCAGATATCACCAAAAAT...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
CDS-3UTR GCA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAGAAGATTTTCTGCTGTaGGCTTCCACGTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQEDFLL*ASTLLW
Trigger: CCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTC...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACGCCATAAAGTATGCCTaGTTTATTTATGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHAIKYA*FIYVQC
Trigger: GCACTGGACATAAATAAAGCAGGCATACTTTATGGC...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR GCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACTCTACACAGGCTTGCTaGTGTTTTTGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDSTQAC*CFCSCQ
Trigger: CTGGCAGCTGCAAAAACAGCAGCAAGCCTGTGTAGA...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCATTGCTGCTGATTTCTaGTGGTGTGAGAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFIAADF*WCERWR
Trigger: CCTCCATCTCTCACACCAGCAGAAATCAGCAGCAAT...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp TCAATGGGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTACATTGTAGAGGATCCTaGAGTTTCTTTTGCATGACT +
Preference number: 4 (lower is better)
Translates to: SMGRLRHILMGLKGQLAVHCRGS*SFFCMT
Trigger: AGTCATGCAAAAGAAACTGCAGGATCCTCTACAATG...TACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCCCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp ATCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGATTACTACCCTCTGCTaGAAGTCACCCCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: IPKYLETKQHISRQGLAMITTLC*KSPLIS
Trigger: TGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAAT...CATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CCA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCACAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CCA 90 bp CTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGTTTTACAACTGCTCATaGGTCAGGTTATCATCACAA +
Preference number: 4 (lower is better)
Translates to: LGIQSYQCWTGPEMIAPLFYNCS*VRLSSQ
Trigger: TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAA...CAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCAATCCCATTCACACATaGCCAGGCTATCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWANPIHT*PGYPKR
Trigger: TCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATT...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAAATCCCATTCACACATaGCCAGGCTATCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSNPIHT*PGYPKR
Trigger: TCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATT...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CCA 90 bp TGCTGTTTTTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTGATGGTTCAACTGAATaGCTGGAATGGTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: CCFCSCQSLNLSYYITQCDGSTE*LEWSFT
Trigger: GGTGAAAGACCATTCCAGCCATTCAGTTGAACCATC...ACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAAAAACAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CCA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCATCCTCTATTCACTACTaGCTTAACGTGTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPSSIHY*LNVFNS
Trigger: ACTGTTGAACACGTTAAGCCAGTAGTGAATAGAGGA...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTGCTGCTGATTTCTGCTaGTGTGAGAGATGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCAADFC*CERWRL
Trigger: CAGCCTCCATCTCTCACACCAGCAGAAATCAGCAGC...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTCAGTCAACTGTTCCATaGTTGTGCAGCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCQSTVP*LCSFPS
Trigger: AGAGGGAAAGCTGCACAACCATGGAACAGTTGACTG...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CCA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCACCCCTGATCTCAGGTaGCAAAACACACTGATTATC +
Preference number: 4 (lower is better)
Translates to: KYLETKQHISRQGLAMLPTPDLR*QNTLII
Trigger: GATAATCAGTGTGTTTTGCCACCTGAGATCAGGGGT...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676180.1
3UTR CAA 72 bp TGTCCAGTGCTCCAGACTGAATGTCTTTCAAAGCTTTaGAGAGCAAACCATCTGCAAACTCAGCACTTCTTT +
Preference number: 4 (lower is better)
Translates to: CPVLQTECLSKL*RANHLQTQHFF
Trigger: AAAGAAGTGCTGAGTTTGCAGATGGTTTGCTCTCAAAAGCTTTGAAAGACATTCAGTCTGGAGCACTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR TCA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTAGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TIRNTNNPTHEPTMILILVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR TCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACGTGTTGGACTGGCCCTaGGATGATAGCTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNVLDWP*DDSSSV
Trigger: AACAGAGGAGCTATCATCTCAGGGCCAGTCCAACAC...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCGCATTCGATTCACAGTaGGGTCTAAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSAFDSQ*GLRGLP
Trigger: AGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGC...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR TCA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCCTAGTAGCTTGCATTTaGGAAGCTTATGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIILVACI*EAYDLD
Trigger: ATCTAAGTCATAAGCTTCTCAAATGCAAGCTACTAG...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACAGGAGATACATGTGTTaGAAGGATTGTTGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYRRYMC*KDCCVE
Trigger: TTCAACACAACAATCCTTTCAACACATGTATCTCCT...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACTGTCTCCTGTCAGAGTaGGCATTTGTAATTCCCACG +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDCLLSE*AFVIPT
Trigger: CGTGGGAATTACAAATGCTCACTCTGACAGGAGACA...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCCCTGGTGGATGCACTTaGGTGCATTTTGTATTTCAT +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGPGGCT*VHFVFH
Trigger: ATGAAATACAAAATGCACTCAAGTGCATCCACCAGG...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCAAAACTTGTTGCTGGTaGTGTATGCACAAAGATTCC +
Preference number: 4 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWAKTCCW*CMHKDS
Trigger: GGAATCTTTGTGCATACATCACCAGCAACAAGTTTT...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCTTTTACTTCTGATATaGGACATTCTGGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGLLLLI*DILGFS
Trigger: GGAAAAGCCCAGAATGTCTCATATCAGAAGTAAAAG...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTCACAGATTTGTTCTTaGTGGGTCTCACATATTCAA +
Preference number: 4 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMSQICS*WVSHIQ
Trigger: TTGAATATGTGAGACCCATCAAGAACAAATCTGTGA...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTATTGCCAAAGGCTTCTaGTTTGGTCGAATAATGTTC +
Preference number: 4 (lower is better)
Translates to: FTHGQAIQKERSHVLMWFIAKGF*FGRIMF
Trigger: GAACATTATTCGACCAAATCAGAAGCCTTTGGCAAT...AAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCCTTATTTTATCCATTTaGGTGCACTGTTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIILILSI*VHCWSY
Trigger: GTATGACCAACAGTGCACTCAAATGGATAAAATAAG...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACAGCAAATTCATCAGCTaGAGGATTATTTGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHSKFIS*RIICVS
Trigger: GCTAACACAAATAATCCTTCAGCTGATGAATTTGCT...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTTCAAAACCTACACAGTaGATGAGGCGGTGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLSKPTQ*MRRWRQ
Trigger: TTGGCGCCACCGCCTCATGCACTGTGTAGGTTTTGA...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR GCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR GCA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATAGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKIAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
CDS-3UTR GCA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCAGCTGAAACTGTGCTTTaGACTATTAAAGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSAETVL*TIKGRE
Trigger: TTCCCTACCTTTAATAGTGCAAAGCACAGTTTCAGC...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCGCTGAAACTGTGCTTTaGACTATTAAAGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFAETVL*TIKGRE
Trigger: TTCCCTACCTTTAATAGTGCAAAGCACAGTTTCAGC...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTCGGCGTGTTTGCTTTTaGCTATTAGCTGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFRRVCF*LLAGMV
Trigger: GACCATGCCAGCTAATAGGCAAAAGCAAACACGCCG...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACGGCGTGTTTGCTTTTaGCTATTAGCTGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVRRVCF*LLAGMV
Trigger: GACCATGCCAGCTAATAGGCAAAAGCAAACACGCCG...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCATCTCCACAGACTTTGTaGTATAGCAATAATAGAGGT +
Preference number: 4 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPSPQTL*YSNNRG
Trigger: ACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGA...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGCACAAGGCTACTTTTTaGAGCACTGCACAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQHKATF*STAQVS
Trigger: AGAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTG...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR GCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACTTTTTCTGTGCGCTCTaGTTGAGCTCTTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDFFCAL*LSSCPQ
Trigger: TTGTGGGCAAGAGCTCAAGCAGAGCGCACAGAAAAA...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTATTTTTCTGTGCGCTCTaGTTGAGCTCTTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLFFCAL*LSSCPQ
Trigger: TTGTGGGCAAGAGCTCAAGCAGAGCGCACAGAAAAA...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR GCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGCTTCCTTCAGAAACATaGCTTTTAGTTCTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMLPSET*LLVLLD
Trigger: GTCAAGAAGAACTAAAAGGCATGTTTCTGAAGGAAG...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACTTCAGTAGTCAAGCTTaGTACAGCACTTATTCTTTC +
Preference number: 4 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYFSSQA*YSTYSF
Trigger: GAAAGAATAAGTGCTGTAGCAAGCTTGACTACTGAA...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGAGTTTCCAAAGGGCTTaGTACTTTGAAATGATCATT +
Preference number: 4 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWSFQRA*YFEMII
Trigger: AATGATCATTTCAAAGTAGCAAGCCCTTTGGAAACT...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTACTGTTCCATGGTTGTaGAGCTTTCCCTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCTVPWL*SFPSLF
Trigger: GAAAAGAGAGGGAAAGCTGCACAACCATGGAACAGT...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR GCA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCAACTGATTATCTACTATaGTTTTTCCTTGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPTDYLL*FFLGVG
Trigger: TCCCACTCCAAGGAAAAAGCATAGTAGATAATCAGT...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTAATTACTACCCTCTGCTaGAAGTCACCCCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLITTLC*KSPLIS
Trigger: TGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAAT...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACGGCATTACTACCCTCTaGTGCAAGTCACCCCTGATC +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNGITTL*CKSPLI
Trigger: GATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCC...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGGAAAGTCTTTTTGGCTaGAATTTGTTCCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGIQSYQCWTGPEMIAPLESLFG*NLFHSL
Trigger: AAGAGAATGGAACAAATTGCAGCCAAAAAGACTTTC...CAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCAGCCATGTTCTCATGTaGTTTACCATACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGSHVLM*FTIPKL
Trigger: AAGCTTTGGTATGGTAAACCACATGAGAACATGGCT...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCATTGGTGATATCTGCCTaGGAAATCTCTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSLVISA*EISLPK
Trigger: TTTAGGAAGAGAGATTTCCCAGGCAGATATCACCAA...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCTGCTGGTGTGAGAGATaGAGGCTGGTTAATGTTTGC +
Preference number: 4 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPCWCER*RLVNVC
Trigger: GCAAACATTAACCAGCCTCCATCTCTCACACCAGCA...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTGCTGCTGATTTCTGCTaGTGTGAGAGATGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLAADFC*CERWRL
Trigger: CAGCCTCCATCTCTCACACCAGCAGAAATCAGCAGC...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGAGAACAACATTTGAATaGGAAGTGCCAACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMRTTFE*EVPTEV
Trigger: AACTTCAGTTGGCACTTCCCATTCAAATGTTGTTCT...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCAAATTTTAGGCTTTGGTaGTCTTCCAATTGGTCGCTT +
Preference number: 4 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSNFRLW*SSNWSL
Trigger: AAGCGACCAATTGGAAGACCACCAAAGCCTAAAATT...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACCAAAGGCTTCTGATTTaGTCGAATAATGTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KAHLNGAQRATCCILIRHQRLLI*SNNVLG
Trigger: TCCAAGAACATTATTCGACCAAATCAGAAGCCTTTG...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCACTATGCTTTTTCCTTaGAGTGGGATGTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWATMLFP*SGMSAF
Trigger: AAATGCTGACATCCCACTCCAAGGAAAAAGCATAGT...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACTATGCTTTTTCCTTaGAGTGGGATGTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: FTHGQAIQKERSHVLMWFTMLFP*SGMSAF
Trigger: AAATGCTGACATCCCACTCCAAGGAAAAAGCATAGT...AAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATTACTATTGCCAAGATaGTCAGCAAATTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSLLLPR*SANSSA
Trigger: AGCTGATGAATTTGCTGACCATCTTGGCAATAGTAA...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAGCATGCTAGGGATTTaGAAAAATAGTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGSMLGI*KNSLPF
Trigger: AAATGGCAAACTATTTTTCCAAATCCCTAGCATGCT...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR TCA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: KYLETKQHISRQGLAMLPLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR TCA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR TCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 4 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWARITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR TCA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCAAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 4 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR TCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCATACGCTACCAATTTATaGGCACTATTCACTGTCAAT +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSYATNL*ALFTVN
Trigger: ATTGACAGTGAATAGTGCTCATAAATTGGTAGCGTA...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
CDS-3UTR TCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCAGATTTATCACAATCTaGGGTGGGCCTAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPRFITI*GGPRNL
Trigger: GAGATTCCTAGGCCCACCTCAGATTGTGATAAATCT...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGAGATTTATCACAATCTaGGGTGGGCCTAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: IVQKKCASVSHTDLSQSERFITI*GGPRNL
Trigger: GAGATTCCTAGGCCCACCTCAGATTGTGATAAATCT...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTGATGTGACTCCTCTTTaGTCTTCAGTTAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVDVTPL*SSVSKL
Trigger: GAGTTTGCTAACTGAAGATCAAAGAGGAGTCACATC...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCATCATCAAGAGCATTTaGCTTCTTACGGCGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VHLGNFLLGIQSYQCWTGIIKSI*LLTACL
Trigger: CAAACACGCCGTAAGAAGTCAAATGCTCTTGATGAT...GCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
CDS-3UTR TCA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCAAGGAGATACATGTGTTaGAAGGATTGTTGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSRRYMC*KDCCVE
Trigger: TTCAACACAACAATCCTTTCAACACATGTATCTCCT...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTACTGTAGGCATGCAGTaGCTATTGATAATATTGCCG +
Preference number: 4 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVTVGMQ*LLIILP
Trigger: CGGCAATATTATCAATAGTCACTGCATGCCTACAGT...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATTTTCTTCAGTTACGTaGTGGGTTGTAGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSFSSVT*WVVGFS
Trigger: TGAAAAACCTACAACCCATCACGTAACTGAAGAAAA...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTTCAGAGTTCGCATTTaGGATATCCTCATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFFRVRI*DILICF
Trigger: GAAACAAATGAGGATATCTCAAATGCGAACTCTGAA...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGCTTTTACTTCTGATATaGGACATTCTGGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLLLLLI*DILGFS
Trigger: GGAAAAGCCCAGAATGTCTCATATCAGAAGTAAAAG...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGCTTTTCCACCTTTCATaGTGCAACCTCTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLLFHLS*CNLLNS
Trigger: TGAGTTTAAGAGGTTGCATCATGAAAGGTGGAAAAG...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGAGTCTTGGTCCCTTTTaGAAGTCTTTTTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLSLGPF*KSFWLQ
Trigger: TTGCAGCCAAAAAGACTTTCAAAAGGGACCAAGACT...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR GCA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAATACCATACCAAAGCTTaGTTTCTCTGGCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: LERSLSITSEEDQYNVQQYHTKA*FLWHGK
Trigger: TTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTA...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAACTCTGTGTTCTCCTGTaGTTCAGATTCCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: LERSLSITSEEDQYNVQQLCVLL*FRFLMC
Trigger: ACACATAAGGAATCTGAAGCACAGGAGAACACAGAG...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GGAAGTACCACAAACTGGCTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCTGAAAGGTATGTCATaGATGTCTAGAATATATGGA +
Preference number: 4 (lower is better)
Translates to: GSTTNWLERSLSITSEEDLKGMS*MSRIYG
Trigger: TCCATATATTCTAGACATGCATGACATACCTTTCAG...GTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCTCTCCACAGACTTTGTaGTATAGCAATAATAGAGGT +
Preference number: 4 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGSPQTL*YSNNRG
Trigger: ACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGA...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCAATACTCTCAAAACCTaGTGGATAACAGCTCTATGC +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGNTLKT*WITALC
Trigger: GCATAGAGCTGTTATCCAGCAGGTTTTGAGAGTATT...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382224.5
CDS-3UTR GCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCCCTTGTATTCTAAAGTaGTGTGAGGTACCCCATAAA +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGPCILK*CEVPHK
Trigger: TTTATGGGGTACCTCACAGCACTTTAGAATACAAGG...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTTGCTGTTTTTGCAGCTaGCAGTCCCTGAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTCCFCS*QSLNLS
Trigger: TGACAGATTCAGGGACTGGCAGCTGCAAAAACAGCA...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTCTACACAGGCTTGCTaGTGTTTTTGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGSTQAC*CFCSCQ
Trigger: CTGGCAGCTGCAAAAACAGCAGCAAGCCTGTGTAGA...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCGTGAATCAGAGGAGTTaGGCATTGCAAATAAAGTTT +
Preference number: 4 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGVNQRS*ALQIKF
Trigger: AAACTTTATTTGCAATGCGCAACTCCTCTGATTCAC...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCACTGTTCCATGGTTGTaGAGCTTTCCCTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLTVPWL*SFPSLF
Trigger: GAAAAGAGAGGGAAAGCTGCACAACCATGGAACAGT...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCATTTGTCCACTGTTaGAAGACTGTCGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLPFVHC*KTVVYV
Trigger: GACATAAACGACAGTCTTGCAACAGTGGACAAATGG...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR GCA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATAGGCATGAACCACCATaGCCGGGCTCAAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: PASTELNHGFKRFQVSTYRHEPP*PGSNSF
Trigger: AAAACTATTTGAGCCCGGGCATGGTGGTTCATGCCT...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR CCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR CCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCTTTTACAACTGCTCATaGGTCAGGTTATCATCACAA +
Preference number: 4 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWAFYNCS*VRLSSQ
Trigger: TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAA...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCATTTTACAACTGCTCATaGGTCAGGTTATCATCACAA +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSFYNCS*VRLSSQ
Trigger: TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAA...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CCA 90 bp TCATCCATAGACCAGTCAGTCAGCTCTTCTGGTTCACAGTCTTCAAATAAACTGTTGGTGATATCTGCCTaGGAAATCTCTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: SSIDQSVSSSGSQSSNKLLVISA*EISLPK
Trigger: TTTAGGAAGAGAGATTTCCCAGGCAGATATCACCAA...CAGTTTATTTGAAGACTGTGAACCAGAAGAGCTGACTGACTGGTCTATGGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675131.1
CDS-3UTR CCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCGAAAGACGATGGAGGTaGAATCCTTTAAGATTATGT +
Preference number: 4 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWAERRWR*NPLRLC
Trigger: ACATAATCTTAAAGGATTCCACCTCCATCGTCTTTC...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCAGAAAGACGATGGAGGTaGAATCCTTTAAGATTATGT +
Preference number: 4 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSERRWR*NPLRLC
Trigger: ACATAATCTTAAAGGATTCCACCTCCATCGTCTTTC...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCTTTTGGACAGTTATaGTCCTCGTTTAATTACAAG +
Preference number: 4 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSSFGQL*SSFNYK
Trigger: CTTGTAATTAAACGAGGACCATAACTGTCCAAAAGA...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CCA 90 bp TTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTAGTTTTAATCTTGCTTaGGTTCCTTTTTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FTHGQAIQKERSHVLMWFSFNLA*VPFSVA
Trigger: TGCCACAGAAAAAGGAACCCAAGCAAGATTAAAACT...AAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACGATGGTTCAACTGAATaGCTGGAATGGTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDDGSTE*LEWSFT
Trigger: GGTGAAAGACCATTCCAGCCATTCAGTTGAACCATC...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGCTTTTCTATTCCTGGTaGATGCACTTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQLFYSW*MHLSAF
Trigger: AAATGCACTCAAGTGCATCCACCAGGAATAGAAAAG...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CCA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACTTTCTGTCAGCATGTTaGTCTTTACCATCAATTTCT +
Preference number: 4 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYFLSAC*SLPSIS
Trigger: AGAAATTGATGGTAAAGACCAACATGCTGACAGAAA...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTAGAACAACATTTGAATaGGAAGTGCCAACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: FTHGQAIQKERSHVLMWFRTTFE*EVPTEV
Trigger: AACTTCAGTTGGCACTTCCCATTCAAATGTTGTTCT...AAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PASTELNHGFKRFQVSTYSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR TCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTAATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR TCA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: VHLGNFLLGIQSYQCWTGLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...GCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
CDS-3UTR TCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 4 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR TCA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 4 (lower is better)
Translates to: KYLETKQHISRQGLAMLPRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR TCA 90 bp TGCTGTTTTTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 4 (lower is better)
Translates to: CCFCSCQSLNLSYYITQCRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...ACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAAAAACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR TCA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGCTAGTAGCTTGCATTTaGGAAGCTTATGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQLVACI*EAYDLD
Trigger: ATCTAAGTCATAAGCTTCTCAAATGCAAGCTACTAG...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
CDS-3UTR TCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATAGATTTATCACAATCTaGGGTGGGCCTAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNRFITI*GGPRNL
Trigger: GAGATTCCTAGGCCCACCTCAGATTGTGATAAATCT...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCATCATCAAGAGCATTTaGCTTCTTACGGCGTGTTTG +
Preference number: 4 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLIIKSI*LLTACL
Trigger: CAAACACGCCGTAAGAAGTCAAATGCTCTTGATGAT...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTAATCATCAAGAGCATTTaGCTTCTTACGGCGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLIIKSI*LLTACL
Trigger: CAAACACGCCGTAAGAAGTCAAATGCTCTTGATGAT...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp TCATCCATAGACCAGTCAGTCAGCTCTTCTGGTTCACAGTCTTCAAATAAACTGAGGAGATACATGTGTTaGAAGGATTGTTGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSIDQSVSSSGSQSSNKLRRYMC*KDCCVE
Trigger: TTCAACACAACAATCCTTTCAACACATGTATCTCCT...CAGTTTATTTGAAGACTGTGAACCAGAAGAGCTGACTGACTGGTCTATGGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675131.1
CDS-3UTR TCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACCCAAGCCCAGAAGTTTaGGGCAAAACGATTCAGATC +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNPSPEV*GKTIQI
Trigger: GATCTGAATCGTTTTGCCTCAAACTTCTGGGCTTGG...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382224.5
CDS-3UTR TCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACGAGTCAACACTTGAGTaGGTTACAGGCCCAGAACAT +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNESTLE*VTGPEH
Trigger: ATGTTCTGGGCCTGTAACTCACTCAAGTGTTGACTC...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACGTAAGAGTCAACACTTaGGTGAGTTACAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNVRVNT*VSYRPR
Trigger: TCTGGGCCTGTAACTCACTCAAGTGTTGACTCTTAC...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACGTAAGAGTCAACACTTaGGTGAGTTACAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNVRVNT*VSYRPR
Trigger: TCTGGGCCTGTAACTCACTCAAGTGTTGACTCTTAC...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTATGTCTCCTGTCAGAGTaGGCATTTGTAATTCCCACG +
Preference number: 4 (lower is better)
Translates to: HYSCILHKSNKDTLTHILCLLSE*AFVIPT
Trigger: CGTGGGAATTACAAATGCTCACTCTGACAGGAGACA...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACTGTCTCCTGTCAGAGTaGGCATTTGTAATTCCCACG +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNCLLSE*AFVIPT
Trigger: CGTGGGAATTACAAATGCTCACTCTGACAGGAGACA...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTATCCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFILQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGGAT...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR TCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGGAGACCCAGATGCTTaGATCAGCTTTCTTTCGAAA +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTGDPDA*ISFLSK
Trigger: TTTCGAAAGAAAGCTGATTCAAGCATCTGGGTCTCC...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR TCA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTACCTTCTAAACATGGGTaGATCAGAGGAGTTGCGCAT +
Preference number: 4 (lower is better)
Translates to: TIRNTNNPTHEPTMILILPSKHG*IRGVAH
Trigger: ATGCGCAACTCCTCTGATTCACCCATGTTTAGAAGG...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635767.1
CDS-3UTR TCA 90 bp CATCTCCACTTACTTGCACCCAAGCATTTGTTATTTGCTCAAATCTATTGTTTACCTTCTAAACATGGGTaGATCAGAGGAGTTGCGCAT +
Preference number: 4 (lower is better)
Translates to: HLHLLAPKHLLFAQIYCLPSKHG*IRGVAH
Trigger: ATGCGCAACTCCTCTGATTCACCCATGTTTAGAAGG...TAAACAATAGATTTGAGCAAATAACAAATGCTTGGGTGCAAGTAAGTGGAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR TCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCACCTTCTTTTACTTCTaGTATGAGACATTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFTFFYF*YETFWA
Trigger: AGCCCAGAATGTCTCATATCAGAAGTAAAAGAAGGT...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ATCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGCTTTTCCACCTTTCATaGTGCAACCTCTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: IPKYLETKQHISRQGLAMLFHLS*CNLLNS
Trigger: TGAGTTTAAGAGGTTGCATCATGAAAGGTGGAAAAG...CATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR TCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGTTTTGCCTAGCAGAATaGGATCTTAAAGTAAAGCGC +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLFCLAE*DLKVKR
Trigger: GCGCTTTACTTTAAGATCTCATTCTGCTAGGCAAAA...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR TCA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAAGCAAATTCATCAGCTaGAGGATTATTTGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQSKFIS*RIICVS
Trigger: GCTAACACAAATAATCCTTCAGCTGATGAATTTGCT...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGTTGTTGACATTTCTGTaGTCTTCCATGGTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLLLTFL*SSMVVF
Trigger: AAAGACCACCATGGAAGATCACAGAAATGTCAACAA...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR TCA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGAAGATGGAAAAATCTTaGACAGCACTAGCAACCATC +
Preference number: 4 (lower is better)
Translates to: PKYLETKQHISRQGLAMLKMEKS*TALATI
Trigger: GATGGTTGCTAGTGCTGTTCAAGATTTTTCCATCTT...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR GCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: KYLETKQHISRQGLAMLPLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR GCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAATTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR GCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCTGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWACEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTGCTGAAACTGTGCTTTaGACTATTAAAGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVAETVL*TIKGRE
Trigger: TTCCCTACCTTTAATAGTGCAAAGCACAGTTTCAGC...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCCTCTGTGTTCTCCTGTaGTTCAGATTCCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLLCVLL*FRFLMC
Trigger: ACACATAAGGAATCTGAAGCACAGGAGAACACAGAG...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACTCTGTGTTCTCCTGTaGTTCAGATTCCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLLCVLL*FRFLMC
Trigger: ACACATAAGGAATCTGAAGCACAGGAGAACACAGAG...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCATTTTTGGTGATATCTaGCTGGGAAATCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFIFGDI*LGNLSS
Trigger: GGAAGAGAGATTTCCCAGGCAGATATCACCAAAAAT...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTAAGTCCAGAAAAAGTGTaGATCAGTCAGTCACACAGA +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLSPEKV*ISQSHR
Trigger: TCTGTGTGACTGACTGATGCACACTTTTTCTGGACT...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATTTCTTACGGCGTGTTTaGTTTTGCCTATTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNFLRRV*FCLLAG
Trigger: GCCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAA...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCTGGATAACAGCTCTATaGATTCGTCTTAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGWITAL*IRLRQK
Trigger: TTTTTGCCTAAGACGAATGCATAGAGCTGTTATCCA...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382224.5
CDS-3UTR GCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACCACAAGGCTACTTTTTaGAGCACTGCACAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDHKATF*STAQVS
Trigger: AGAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTG...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCTGCTGTTTTTGCAGCTaGCAGTCCCTGAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSCCFCS*QSLNLS
Trigger: TGACAGATTCAGGGACTGGCAGCTGCAAAAACAGCA...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTGCTGTTTTTGCAGCTaGCAGTCCCTGAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGCCFCS*QSLNLS
Trigger: TGACAGATTCAGGGACTGGCAGCTGCAAAAACAGCA...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGATTGCTGCTGATTTCTaGTGGTGTGAGAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLDSYGPRLITSFITSLIAADF*WCERWR
Trigger: CCTCCATCTCTCACACCAGCAGAAATCAGCAGCAAT...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTCCTGTGGCTTTCTTATaGTCATTTTCTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFPVAFL*SFSQGK
Trigger: CTTCCCCTGAGAAAATGAGCATAAGAAAGCCACAGG...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGCATTGTAGAGGATCCTaGAGTTTCTTTTGCATGACT +
Preference number: 4 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMHCRGS*SFFCMT
Trigger: AGTCATGCAAAAGAAACTGCAGGATCCTCTACAATG...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCAGAGATTTTCACTTTTaGCGGTCTACCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSRDFHF*RSTRLP
Trigger: AGGAAGCCTGGTAGACCGGCAAAAGTGAAAATCTCT...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAAGTTTCCAAAGGGCTTaGTACTTTGAAATGATCATT +
Preference number: 4 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSSFQRA*YFEMII
Trigger: AATGATCATTTCAAAGTAGCAAGCCCTTTGGAAACT...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTACTGTTCCATGGTTGTaGAGCTTTCCCTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTTVPWL*SFPSLF
Trigger: GAAAAGAGAGGGAAAGCTGCACAACCATGGAACAGT...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTATTACTACCCTCTGCTaGAAGTCACCCCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: LGRCQHKCIINHEAARYIITTLC*KSPLIS
Trigger: TGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAAT...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATAAGCCATGTTCTCATGTaGTTTACCATACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKISHVLM*FTIPKL
Trigger: AAGCTTTGGTATGGTAAACCACATGAGAACATGGCT...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAGAAAGACGATGGAGGTaGAATCCTTTAAGATTATGT +
Preference number: 4 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQERRWR*NPLRLC
Trigger: ACATAATCTTAAAGGATTCCACCTCCATCGTCTTTC...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCTCTTTTGGACAGTTATaGTCCTCGTTTAATTACAAG +
Preference number: 4 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWASFGQL*SSFNYK
Trigger: CTTGTAATTAAACGAGGACCATAACTGTCCAAAAGA...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp TTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTTCTTTTGGACAGTTATaGTCCTCGTTTAATTACAAG +
Preference number: 4 (lower is better)
Translates to: FTHGQAIQKERSHVLMWFSFGQL*SSFNYK
Trigger: CTTGTAATTAAACGAGGACCATAACTGTCCAAAAGA...AAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACAACTTTGCTTTCCATTaGGGGAAGGGGGAAATATAC +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDNFAFH*GKGEIY
Trigger: GTATATTTCCCCCTTCCCCCAATGGAAAGCAAAGTT...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGATCAATTTTAGGCTTTaGTGGTCTTCCAATTGGTCG +
Preference number: 4 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMINFRL*WSSNWS
Trigger: CGACCAATTGGAAGACCACCAAAGCCTAAAATTGAT...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTACTATGCTTTTTCCTTaGAGTGGGATGTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCTMLFP*SGMSAF
Trigger: AAATGCTGACATCCCACTCCAAGGAAAAAGCATAGT...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CCA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCTCTCTAAATAATCCATaGGCTCAGATAGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KYLETKQHISRQGLAMLPSLNNP*AQIEKA
Trigger: TGCTTTCTCTATCTGAGCCCATGGATTATTTAGAGA...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675927.1
ENST00000676180.1
3UTR CAA 72 bp ACTTGGCCTGACTTACGAAACTTGTACTATATGAAATaGGTCCTCTTTTCTGCAATACCCAACGAAACACCT +
Preference number: 4 (lower is better)
Translates to: TWPDLRNLYYMK*VLFSAIPNETP
Trigger: AGGTGTTTCGTTGGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR CAA 72 bp ACTAAAGGGCTCATTCTGGCAAACAGTGATGTTTGTTaGATCAATTTTAGGCTTTGGTGGTCTTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: TKGLILANSDVC*INFRLWWSSNW
Trigger: CCAATTGGAAGACCACCAAAGCCTAAAATTGATCAAACAAACATCACTGTTTGCCAGAATGAGCCCTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR TCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAGTCTTCAAATAAACTaGGGTCTCTTCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSSLQIN*GLFVAV
Trigger: CACGGCTACGAAGAGACCTCAGTTTATTTGAAGACT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: PASTELNHGFKRFQVSTYMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR TCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTATTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR TCA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR TCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR TCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCTACGCTACCAATTTATaGGCACTATTCACTGTCAAT +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFYATNL*ALFTVN
Trigger: ATTGACAGTGAATAGTGCTCATAAATTGGTAGCGTA...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCCATTTGAGAAGCTTATaGCTTAGATGGGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPHLRSL*LRWAES
Trigger: TGATTCTGCCCATCTAAGTCATAAGCTTCTCAAATG...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCGATGTGACTCCTCTTTaGTCTTCAGTTAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSDVTPL*SSVSKL
Trigger: GAGTTTGCTAACTGAAGATCAAAGAGGAGTCACATC...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTAAGGACAGAGAAAAGTaGCAGTTTCAGCTAGGACGA +
Preference number: 4 (lower is better)
Translates to: LGRCQHKCIINHEAARYIKDREK*QFQLGR
Trigger: TCGTCCTAGCTGAAACTGTCACTTTTCTCTGTCCTT...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTTCCAGTGCTCCAGACTaGATGTCTTTCAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTSSAPD*MSFKAF
Trigger: AAAAGCTTTGAAAGACATTCAGTCTGGAGCACTGGA...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTCCAGTGCTCCAGACTaGATGTCTTTCAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYSSAPD*MSFKAF
Trigger: AAAAGCTTTGAAAGACATTCAGTCTGGAGCACTGGA...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR TCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACCTGTACAGTAGGATTTaGAGTTTCATATTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDLYSRI*SFILEA
Trigger: AGCCTCCAATATGAAACTTCAAATCCTACTGTACAG...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACATAAGATGGTTCAACTaGATGGCTGGAATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDIRWFN*MAGMVF
Trigger: AAAGACCATTCCAGCCATTCAGTTGAACCATCTTAT...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTACTGTAGGCATGCAGTaGCTATTGATAATATTGCCG +
Preference number: 4 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCTVGMQ*LLIILP
Trigger: CGGCAATATTATCAATAGTCACTGCATGCCTACAGT...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAATCACAGATTTGTTCTTaGTGGGTCTCACATATTCAA +
Preference number: 4 (lower is better)
Translates to: LERSLSITSEEDQYNVQQSQICS*WVSHIQ
Trigger: TTGAATATGTGAGACCCATCAAGAACAAATCTGTGA...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTGGTGGCAAAACACACTaGTTATCTACTATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCGGKTH*LSTMLF
Trigger: AAAAAGCATAGTAGATAATCAGTGTGTTTTGCCACC...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR TCA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGTGTTCAAGACAGTTaGGCTTCCTCAAAAATATTC +
Preference number: 4 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCCVQDS*ASSKIF
Trigger: GAATATTTTTGAGGAAGCTCAACTGTCTTGAACACA...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR TCA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTAGCAAATTCATCAGCTaGAGGATTATTTGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCSKFIS*RIICVS
Trigger: GCTAACACAAATAATCCTTCAGCTGATGAATTTGCT...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR TCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTCTGGAGGTCGTAGCTaGGGAATTTTTAACTGTACA +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYSGGRS*GIFNCT
Trigger: TGTACAGTTAAAAATTCCTCAGCTACGACCTCCAGA...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR GCA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTAGCTCAAAGGGCAACTTaGTGTATTCTCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: TIRNTNNPTHEPTMILILAQRAT*CILIRH
Trigger: GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGC...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR GCA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATATTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKIFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCGCTGAAACTGTGCTTTaGACTATTAAAGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLAETVL*TIKGRE
Trigger: TTCCCTACCTTTAATAGTGCAAAGCACAGTTTCAGC...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTAATTTTTGGTGATATCTaGCTGGGAAATCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLIFGDI*LGNLSS
Trigger: GGAAGAGAGATTTCCCAGGCAGATATCACCAAAAAT...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTAGTCCAGAAAAAGTGTaGATCAGTCAGTCACACAGA +
Preference number: 4 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCSPEKV*ISQSHR
Trigger: TCTGTGTGACTGACTGATGCACACTTTTTCTGGACT...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACGAAGATTTTCTGCTGTaGGCTTCCACGTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNEDFLL*ASTLLW
Trigger: CCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTC...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTAGAAGATTTTCTGCTGTaGGCTTCCACGTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: TIRNTNNPTHEPTMILILEDFLL*ASTLLW
Trigger: CCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTC...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR GCA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTGAAGATTTTCTGCTGTaGGCTTCCACGTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLEDFLL*ASTLLW
Trigger: CCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTC...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACGCCATAAAGTATGCCTaGTTTATTTATGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDAIKYA*FIYVQC
Trigger: GCACTGGACATAAATAAAGCAGGCATACTTTATGGC...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCTTTTACCACTACAGTTaGATACTCCATAAATCCAAC +
Preference number: 4 (lower is better)
Translates to: LCFPLGEGGNILNNASSGFYHYS*ILHKSN
Trigger: GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAA...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGAGAGAAGCAGCATTCTaGTCTTGGACTAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: IVQKKCASVSHTDLSQSEREAAF*SWTRNF
Trigger: GAAATTTCTAGTCCAAGAGCAGAATGCTGCTTCTCT...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATAAAATTGTTTTCCATCTaGAGATTTCTCCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKIKLFSI*RFLLWL
Trigger: AAGCCACAGGAGAAATCTGCAGATGGAAAACAATTT...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGAGAGATTTTCACTTTTaGCGGTCTACCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLLDSYGPRLITSFITSLRDFHF*RSTRLP
Trigger: AGGAAGCCTGGTAGACCGGCAAAAGTGAAAATCTCT...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCGAGTTAGCCACTTTATaGAGTATATGCAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: KYLETKQHISRQGLAMLPELATL*SICNFS
Trigger: AGAGAAATTGCATATACTGCATAAAGTGGCTAACTC...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR GCA 90 bp ATCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGACTGATTATCTACTATaGTTTTTCCTTGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: IPKYLETKQHISRQGLAMTDYLL*FFLGVG
Trigger: TCCCACTCCAAGGAAAAAGCATAGTAGATAATCAGT...CATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR GCA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCGAAAGTCTTTTTGGCTaGAATTTGTTCCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: KYLETKQHISRQGLAMLPESLFG*NLFHSL
Trigger: AAGAGAATGGAACAAATTGCAGCCAAAAAGACTTTC...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCAGCCATGTTCTCATGTaGTTTACCATACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPSHVLM*FTIPKL
Trigger: AAGCTTTGGTATGGTAAACCACATGAGAACATGGCT...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATGGAAGTACCACAAACTaGCTAGAAAGGAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNGSTTN*LERSLS
Trigger: TGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACGGAAGTACCACAAACTaGCTAGAAAGGAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYGSTTN*LERSLS
Trigger: TGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGTCTTTTGGACAGTTATaGTCCTCGTTTAATTACAAG +
Preference number: 4 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLSFGQL*SSFNYK
Trigger: CTTGTAATTAAACGAGGACCATAACTGTCCAAAAGA...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCAGTTTTAATCTTGCTTaGGTTCCTTTTTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFSFNLA*VPFSVA
Trigger: TGCCACAGAAAAAGGAACCCAAGCAAGATTAAAACT...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGACTGAATGGCTGGAATaGTCTTTCACCAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQTEWLE*SFTNKN
Trigger: ATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGT...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACCTTTTCTATTCCTGGTaGATGCACTTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDLFYSW*MHLSAF
Trigger: AAATGCACTCAAGTGCATCCACCAGGAATAGAAAAG...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACTTTCTTTTCTATTCCTaGTGGATGCACTTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDFLFYS*WMHLSA
Trigger: TGCACTCAAGTGCATCCACCAGGAATAGAAAAGAAA...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCGCAGCATTCTGCTCTTaGACTAGAAATTTCAACATA +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFAAFCS*TRNFNI
Trigger: TATGTTGAAATTTCTAGTCCAAGAGCAGAATGCTGC...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAATTTCTGTCAGCATGTTaGTCTTTACCATCAATTTCT +
Preference number: 4 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQFLSAC*SLPSIS
Trigger: AGAAATTGATGGTAAAGACCAACATGCTGACAGAAA...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACACCCCTGATCTCAGGTaGCAAAACACACTGATTATC +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNTPDLR*QNTLII
Trigger: GATAATCAGTGTGTTTTGCCACCTGAGATCAGGGGT...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp ATCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTACTATTGCCAAGATaGTCAGCAAATTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: IPKYLETKQHISRQGLAMLLLPR*SANSSA
Trigger: AGCTGATGAATTTGCTGACCATCTTGGCAATAGTAA...CATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CCA 90 bp ATCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTCTCTAAATAATCCATaGGCTCAGATAGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: IPKYLETKQHISRQGLAMSLNNP*AQIEKA
Trigger: TGCTTTCTCTATCTGAGCCCATGGATTATTTAGAGA...CATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675927.1
ENST00000676180.1
CDS-3UTR CCA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGGAGGCTAGGGATTTaGAAAAATAGTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCWRLGI*KNSLPF
Trigger: AAATGGCAAACTATTTTTCCAAATCCCTAGCCTCCA...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676180.1
3UTR CAA 72 bp TGCTTTCTGAAGGGGCTGGCATTAAAGTCAGAATATTaGGTCCCTAATTTGATTCCCCTGGTATTTATTACT +
Preference number: 4 (lower is better)
Translates to: CFLKGLALKSEY*VPNLIPLVFIT
Trigger: AGTAATAAATACCAGGGGAATCAAATTAGGGACCAAATATTCTGACTTTAATGCCAGCCCCTTCAGAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR TCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACATGGTATACAATCACTaGCTGCTTCTCTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNMVYNH*LLLSVG
Trigger: ACCTACAGAGAGAAGCAGTCAGTGATTGTATACCAT...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382224.5
ENST00000382226.5
CDS-3UTR TCA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: PASTELNHGFKRFQVSTYLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR TCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTACTCCATCCCCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGTPSPC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGGGGATGGAGT...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTCATTTGAGAAGCTTATaGCTTAGATGGGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFHLRSL*LRWAES
Trigger: TGATTCTGCCCATCTAAGTCATAAGCTTCTCAAATG...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGGATGTGACTCCTCTTTaGTCTTCAGTTAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: SLLDSYGPRLITSFITSLDVTPL*SSVSKL
Trigger: GAGTTTGCTAACTGAAGATCAAAGAGGAGTCACATC...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCATCATCAAGAGCATTTaGCTTCTTACGGCGTGTTTG +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSIIKSI*LLTACL
Trigger: CAAACACGCCGTAAGAAGTCAAATGCTCTTGATGAT...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTCCAGTGCTCCAGACTaGATGTCTTTCAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGSSAPD*MSFKAF
Trigger: AAAAGCTTTGAAAGACATTCAGTCTGGAGCACTGGA...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACTCCAGTGCTCCAGACTaGATGTCTTTCAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNSSAPD*MSFKAF
Trigger: AAAAGCTTTGAAAGACATTCAGTCTGGAGCACTGGA...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTCTGTACAGTAGGATTTaGAGTTTCATATTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTLYSRI*SFILEA
Trigger: AGCCTCCAATATGAAACTTCAAATCCTACTGTACAG...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACGAGGTTTTGGAAACTTaGTACATAACATCCAACAGA +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDEVLET*YITSNR
Trigger: TCTGTTGGATGTTATGTATCAAGTTTCCAAAACCTC...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTCCTGGTGGATGCACTTaGGTGCATTTTGTATTTCAT +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGPGGCT*VHFVFH
Trigger: ATGAAATACAAAATGCACTCAAGTGCATCCACCAGG...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACATCTATTCAAGACCCTaGACAAACTGCAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDIYSRP*TNCKFG
Trigger: ACCAAATTTGCAGTTTGTTCAGGGTCTTGAATAGAT...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTAAAACTTGTTGCTGGTaGTGTATGCACAAAGATTCC +
Preference number: 4 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCKTCCW*CMHKDS
Trigger: GGAATCTTTGTGCATACATCACCAGCAACAAGTTTT...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTTCGATTAAGGGCTTTTaGGATTCTGAAGACACAACA +
Preference number: 4 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCSIKGF*DSEDTT
Trigger: TGTTGTGTCTTCAGAATCTCAAAAGCCCTTAATCGA...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGTTTTCTTCAGTTACGTaGTGGGTTGTAGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: IVQKKCASVSHTDLSQSEFSSVT*WVVGFS
Trigger: TGAAAAACCTACAACCCATCACGTAACTGAAGAAAA...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTATGTTCTTGGAAGGCTaGGGTATCACAGATTTGTTC +
Preference number: 4 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFMFLEG*GITDLF
Trigger: GAACAAATCTGTGATACCTCAGCCTTCCAAGAACAT...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACATGTTCTTGGAAGGCTaGGGTATCACAGATTTGTTC +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNMFLEG*GITDLF
Trigger: GAACAAATCTGTGATACCTCAGCCTTCCAAGAACAT...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATAGTCTTGGTCCCTTTTaGAAGTCTTTTTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHSLGPF*KSFWLQ
Trigger: TTGCAGCCAAAAAGACTTTCAAAAGGGACCAAGACT...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTTTTTGCCTAGCAGAATaGGATCTTAAAGTAAAGCGC +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFFCLAE*DLKVKR
Trigger: GCGCTTTACTTTAAGATCTCATTCTGCTAGGCAAAA...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
38% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTTTAGTTTCTGAACTATaGAGAGGTAGTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFLVSEL*RGSCSD
Trigger: GTCACTGCAACTACCTCTTCATAGTTCAGAAACTAA...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000635767.1
CDS-3UTR TCA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATGCAGATAGCTCTTGCTaGGTATTTTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: PASTELNHGFKRFQVSTYADSSC*VFCSCI
Trigger: AATGCAAGAACAAAATACTCAGCAAGAGCTATCTGC...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR GCA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: IVQKKCASVSHTDLSQSELKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR GCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATCACCTGTTTTACAACTaGTCATGGGTCAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHHLFYN*SWVRLS
Trigger: TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTG...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCTTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACCATTGCTGAAACTGTaGTTTGCACTATTAAAGGTA +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLPLLKL*FALLKV
Trigger: TACCTTTAATAGTGCAAAGCACAGTTTCAGCAATGG...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGTACCATACCAAAGCTTaGTTTCTCTGGCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLLDSYGPRLITSFITSLYHTKA*FLWHGK
Trigger: TTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTA...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCCTCTGTGTTCTCCTGTaGTTCAGATTCCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSLCVLL*FRFLMC
Trigger: ACACATAAGGAATCTGAAGCACAGGAGAACACAGAG...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCATTTTTGGTGATATCTaGCTGGGAAATCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSIFGDI*LGNLSS
Trigger: GGAAGAGAGATTTCCCAGGCAGATATCACCAAAAAT...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACATTTTTGGTGATATCTaGCTGGGAAATCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYIFGDI*LGNLSS
Trigger: GGAAGAGAGATTTCCCAGGCAGATATCACCAAAAAT...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCAGTCCAGAAAAAGTGTaGATCAGTCAGTCACACAGA +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSSPEKV*ISQSHR
Trigger: TCTGTGTGACTGACTGATGCACACTTTTTCTGGACT...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTAGTCCAGAAAAAGTGTaGATCAGTCAGTCACACAGA +
Preference number: 4 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFSPEKV*ISQSHR
Trigger: TCTGTGTGACTGACTGATGCACACTTTTTCTGGACT...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTGAAAGGTATGTCATaGATGTCTAGAATATATGGA +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFLKGMS*MSRIYG
Trigger: TCCATATATTCTAGACATGCATGACATACCTTTCAG...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp TCTCTCTGTAGGTTACAAAATGAACATTTTTCATCCATAGACCAGTCAGTCAGCTCTCCACAGACTTTGTaGTATAGCAATAATAGAGGT +
Preference number: 4 (lower is better)
Translates to: SLCRLQNEHFSSIDQSVSSPQTL*YSNNRG
Trigger: ACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGA...GCTGACTGACTGGTCTATGGATGAAAAATGTTCATTTTGTAACCTACAGAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675131.1
CDS-3UTR GCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACCACAAGGCTACTTTTTaGAGCACTGCACAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNHKATF*STAQVS
Trigger: AGAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTG...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTCACAAGGCTACTTTTTaGAGCACTGCACAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLHKATF*STAQVS
Trigger: AGAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTG...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR GCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTCCTTGTATTCTAAAGTaGTGTGAGGTACCCCATAAA +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTPCILK*CEVPHK
Trigger: TTTATGGGGTACCTCACAGCACTTTAGAATACAAGG...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTAAAGTTAAAATGCACTaGCCAGCTTCTAACTACCCA +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTKVKMH*PASNYP
Trigger: TGGGTAGTTAGAAGCTGGGCAGTGCATTTTAACTTT...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACGATGACCCTGACATCTaGTGTTCTGTAATCTATTAT +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDDDPDI*CSVIYY
Trigger: ATAATAGATTACAGAACAGCAGATGTCAGGGTCATC...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCTTTTCACTTGTAGCATaGTTGCTGAGTATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VHLGNFLLGIQSYQCWTGFSLVA*LLSILF
Trigger: GAACAAAATACTCAGCAAGCATGCTACAAGTGAAAA...GCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510451.5
CDS-3UTR GCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTCTTGGAGACCCAGATaGTTGAATCAGCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGSWRPR*LNQLSF
Trigger: GAAAGAAAGCTGATTCAAGCATCTGGGTCTCCAAGA...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR GCA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTAGGCTTCCTACTTATTaGCAAAGGCTTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFRLPTY*QRLLIW
Trigger: CCAAATCAGAAGCCTTTGGCAATAAGTAGGAAGCCT...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTAGGCTTCCTACTTATTaGCAAAGGCTTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLRLPTY*QRLLIW
Trigger: CCAAATCAGAAGCCTTTGGCAATAAGTAGGAAGCCT...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCTCATCTCCACTTACTTaGACCCAAGCATTTGTTATT +
Preference number: 4 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPSSPLT*TQAFVI
Trigger: AATAACAAATGCTTGGGTGCAAGTAAGTGGAGATGA...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGTGTTTCTGTTGTTTaGATAAACCAAGTACAGAGT +
Preference number: 4 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCCVSVV*INQVQS
Trigger: ACTCTGTACTTGGTTTATGCAAACAACAGAAACACA...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR GCA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCGAGTTAGCCACTTTATaGAGTATATGCAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: VHLGNFLLGIQSYQCWTGELATL*SICNFS
Trigger: AGAGAAATTGCATATACTGCATAAAGTGGCTAACTC...GCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR GCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTCCATTTGTCCACTGTTaGAAGACTGTCGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: LGRCQHKCIINHEAARYIPFVHC*KTVVYV
Trigger: GACATAAACGACAGTCTTGCAACAGTGGACAAATGG...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CATCTCCACTTACTTGCACCCAAGCATTTGTTATTTGCTCAAATCTATTGTTTACCATTTGTCCACTGTTaGAAGACTGTCGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: HLHLLAPKHLLFAQIYCLPFVHC*KTVVYV
Trigger: GACATAAACGACAGTCTTGCAACAGTGGACAAATGG...TAAACAATAGATTTGAGCAAATAACAAATGCTTGGGTGCAAGTAAGTGGAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR GCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCTTTTCACTTGTAGCATaGTCAGATAGAGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSFSLVA*SDRESR
Trigger: CCTGCTTTCTCTATCTGAGCATGCTACAAGTGAAAA...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675143.1
CDS-3UTR CCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTACAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: HYSCILHKSNKDTLTHILQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTCAATCTTATCAGTGTTaGACTGGCCCTGAGATGATA +
Preference number: 4 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFQSYQC*TGPEMI
Trigger: TATCATCTCAGGGCCAGTCCAACACTGATAAGATTG...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTAAGCCATGTTCTCATGTaGTTTACCATACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVSHVLM*FTIPKL
Trigger: AAGCTTTGGTATGGTAAACCACATGAGAACATGGCT...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTGAAATTGACACTTaGCCTGACTTACGAAACTTG +
Preference number: 4 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLFEIDT*PDLRNL
Trigger: CAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTCAAA...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCTTTGAAATTGACACTTaGCCTGACTTACGAAACTTG +
Preference number: 4 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPFEIDT*PDLRNL
Trigger: CAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTCAAA...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTATTGGTGATATCTGCCTaGGAAATCTCTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVLVISA*EISLPK
Trigger: TTTAGGAAGAGAGATTTCCCAGGCAGATATCACCAA...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTGGAAGTACCACAAACTaGCTAGAAAGGAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLGSTTN*LERSLS
Trigger: TGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTAGGAAGTACCACAAACTaGCTAGAAAGGAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: TIRNTNNPTHEPTMILILGSTTN*LERSLS
Trigger: TGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACGGAAGTACCACAAACTaGCTAGAAAGGAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNGSTTN*LERSLS
Trigger: TGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGAAAGACGATGGAGGTaGAATCCTTTAAGATTATGT +
Preference number: 4 (lower is better)
Translates to: IVQKKCASVSHTDLSQSEERRWR*NPLRLC
Trigger: ACATAATCTTAAAGGATTCCACCTCCATCGTCTTTC...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGAGTTTTAATCTTGCTTaGGTTCCTTTTTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: IVQKKCASVSHTDLSQSESFNLA*VPFSVA
Trigger: TGCCACAGAAAAAGGAACCCAAGCAAGATTAAAACT...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACGCTGATGGAGGTAAGTaGAAGCTGTTGGGAATTTTA +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNADGGK*KLLGIL
Trigger: TAAAATTCCCAACAGCTTCCACTTACCTCCATCAGC...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAGCTGATGGAGGTAAGTaGAAGCTGTTGGGAATTTTA +
Preference number: 4 (lower is better)
Translates to: HYSCILHKSNKDTLTHILADGGK*KLLGIL
Trigger: TAAAATTCCCAACAGCTTCCACTTACCTCCATCAGC...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTGCTGATGGAGGTAAGTaGAAGCTGTTGGGAATTTTA +
Preference number: 4 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLADGGK*KLLGIL
Trigger: TAAAATTCCCAACAGCTTCCACTTACCTCCATCAGC...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR CCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGTTCAACTGAATGGCTaGAATGGTCTTTCACCAATA +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTVQLNG*NGLSPI
Trigger: TATTGGTGAAAGACCATTCCAGCCATTCAGTTGAAC...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACTTTGCTTTCCATTaGGGGAAGGGGGAAATATAC +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSNFAFH*GKGEIY
Trigger: GTATATTTCCCCCTTCCCCCAATGGAAAGCAAAGTT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACAACTTTGCTTTCCATTaGGGGAAGGGGGAAATATAC +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNNFAFH*GKGEIY
Trigger: GTATATTTCCCCCTTCCCCCAATGGAAAGCAAAGTT...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTCCTCTATTCACTACTaGCTTAACGTGTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYSSIHY*LNVFNS
Trigger: ACTGTTGAACACGTTAAGCCAGTAGTGAATAGAGGA...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCGTACATTTTCAACACTaGAAATCAAGCGACCCATAT +
Preference number: 4 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLVHFQH*KSSDPY
Trigger: ATATGGGTCGCTTGATTTCCAGTGTTGAAAATGTAC...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATAATTTTAGGCTTTGGTaGTCTTCCAATTGGTCGCTT +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNNFRLW*SSNWSL
Trigger: AAGCGACCAATTGGAAGACCACCAAAGCCTAAAATT...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCCTAAAGGGCTCATTCTaGCAAACAGTGATGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSLKGSF*QTVMFV
Trigger: AACAAACATCACTGTTTGCCAGAATGAGCCCTTTAG...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TTGTTTAATTCCTCTAATAAGGAATCATTTGAAGCAGAAGTAGCCCACCACCTGCGAAAGTCTGTTTCTTaGGGTATCTTTGTAAGCTAT +
Preference number: 4 (lower is better)
Translates to: LFNSSNKESFEAEVAHHLRKSVS*GIFVSY
Trigger: ATAGCTTACAAAGATACCCCAAGAAACAGACTTTCG...CAGGTGGTGGGCTACTTCTGCTTCAAATGATTCCTTATTAGAGGAATTAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CCA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCAGCATGCTAGGGATTTaGAAAAATAGTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFSMLGI*KNSLPF
Trigger: AAATGGCAAACTATTTTTCCAAATCCCTAGCATGCT...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CATCTCCACTTACTTGCACCCAAGCATTTGTTATTTGCTCAAATCTATTGTTTATTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: HLHLLAPKHLLFAQIYCLLGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...TAAACAATAGATTTGAGCAAATAACAAATGCTTGGGTGCAAGTAAGTGGAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR TCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTTTAGGATCACAGTTCTaGGGAAGATCTTTCTTTCGA +
Preference number: 4 (lower is better)
Translates to: LGRCQHKCIINHEAARYILGSQF*GRSFFR
Trigger: TCGAAAGAAAGATCTTCCTCAGAACTGTGATCCTAA...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTTACGCTACCAATTTATaGGCACTATTCACTGTCAAT +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFYATNL*ALFTVN
Trigger: ATTGACAGTGAATAGTGCTCATAAATTGGTAGCGTA...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATCATTTGAGAAGCTTATaGCTTAGATGGGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHHLRSL*LRWAES
Trigger: TGATTCTGCCCATCTAAGTCATAAGCTTCTCAAATG...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATAGGAGATACATGTGTTaGAAGGATTGTTGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNRRYMC*KDCCVE
Trigger: TTCAACACAACAATCCTTTCAACACATGTATCTCCT...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGGAGATACATGTGTTaGAAGGATTGTTGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTRRYMC*KDCCVE
Trigger: TTCAACACAACAATCCTTTCAACACATGTATCTCCT...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACCTGTACAGTAGGATTTaGAGTTTCATATTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNLYSRI*SFILEA
Trigger: AGCCTCCAATATGAAACTTCAAATCCTACTGTACAG...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGAACTTACTCGTAGCTaGGGAATTTTTAACTGTACA +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTELTRS*GIFNCT
Trigger: TGTACAGTTAAAAATTCCTCAGCTACGAGTAAGTTC...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGAGGTTTTGGAAACTTaGTACATAACATCCAACAGA +
Preference number: 4 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTEVLET*YITSNR
Trigger: TCTGTTGGATGTTATGTATCAAGTTTCCAAAACCTC...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACATAAGATGGTTCAACTaGATGGCTGGAATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNIRWFN*MAGMVF
Trigger: AAAGACCATTCCAGCCATTCAGTTGAACCATCTTAT...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCAGGACTACGAAAGGCTaGTTTTGTAGAGTGAATGTT +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSRTTKG*FCRVNV
Trigger: AACATTCACTCTACAAAATCAGCCTTTCGTAGTCCT...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATACCTTCTTTTACTTCTaGTATGAGACATTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHTFFYF*YETFWA
Trigger: AGCCCAGAATGTCTCATATCAGAAGTAAAAGAAGGT...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCATTGCCAAAGGCTTCTaGTTTGGTCGAATAATGTTC +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSIAKGF*FGRIMF
Trigger: GAACATTATTCGACCAAATCAGAAGCCTTTGGCAAT...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTCTTATTTTATCCATTTaGGTGCACTGTTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCLILSI*VHCWSY
Trigger: GTATGACCAACAGTGCACTCAAATGGATAAAATAAG...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTAGGTGGCAAAACACACTaGTTATCTACTATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVGGKTH*LSTMLF
Trigger: AAAAAGCATAGTAGATAATCAGTGTGTTTTGCCACC...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCTGTGTTCAAGACAGTTaGGCTTCCTCAAAAATATTC +
Preference number: 4 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSCVQDS*ASSKIF
Trigger: GAATATTTTTGAGGAAGCTCAACTGTCTTGAACACA...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTTTTGCCTAGCAGAATaGGATCTTAAAGTAAAGCGC +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNFCLAE*DLKVKR
Trigger: GCGCTTTACTTTAAGATCTCATTCTGCTAGGCAAAA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTTTTTCACTTGTAGCATaGCAGCCACTGAATTTTCAG +
Preference number: 4 (lower is better)
Translates to: LGRCQHKCIINHEAARYIFSLVA*QPLNFQ
Trigger: CTGAAAATTCAGTGGCTGGCATGCTACAAGTGAAAA...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326877.8
ENST00000675131.1
CDS-3UTR GCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATTTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCTTTCTTTCACCAATTTaGTTCGAGGTAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSFLSPI*FEVVGI
Trigger: GATACCAACTACCTCGAAGCAAATTGGTGAAAGAAA...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTATTTATTTATGTCCAGTaGTCCAGACTGAATGTCTTT +
Preference number: 4 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLFIYVQ*SRLNVF
Trigger: AAAGACATTCAGTCTGGAGCACTGGACATAAATAAA...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR GCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACGCCATAAAGTATGCCTaGTTTATTTATGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNAIKYA*FIYVQC
Trigger: GCACTGGACATAAATAAAGCAGGCATACTTTATGGC...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTACCTTGTATTCTAAAGTaGTGTGAGGTACCCCATAAA +
Preference number: 4 (lower is better)
Translates to: HYSCILHKSNKDTLTHILPCILK*CEVPHK
Trigger: TTTATGGGGTACCTCACAGCACTTTAGAATACAAGG...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTAAAGTTAAAATGCACTaGCCAGCTTCTAACTACCCA +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGKVKMH*PASNYP
Trigger: TGGGTAGTTAGAAGCTGGGCAGTGCATTTTAACTTT...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAAAAGTTAAAATGCACTaGCCAGCTTCTAACTACCCA +
Preference number: 4 (lower is better)
Translates to: HYSCILHKSNKDTLTHILKVKMH*PASNYP
Trigger: TGGGTAGTTAGAAGCTGGGCAGTGCATTTTAACTTT...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACTTTTACCACTACAGTTaGATACTCCATAAATCCAAC +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDFYHYS*ILHKSN
Trigger: GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAA...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCGTGAATCAGAGGAGTTaGGCATTGCAAATAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSVNQRS*ALQIKF
Trigger: AAACTTTATTTGCAATGCGCAACTCCTCTGATTCAC...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATAAATTGTTTTCCATCTaGAGATTTCTCCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNKLFSI*RFLLWL
Trigger: AAGCCACAGGAGAAATCTGCAGATGGAAAACAATTT...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTCTTCCTTCAGAAACATaGCTTTTAGTTCTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTLPSET*LLVLLD
Trigger: GTCAAGAAGAACTAAAAGGCATGTTTCTGAAGGAAG...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGTGTGTTTCTGTTGTTTaGATAAACCAAGTACAGAGT +
Preference number: 4 (lower is better)
Translates to: IVQKKCASVSHTDLSQSECVSVV*INQVQS
Trigger: ACTCTGTACTTGGTTTATGCAAACAACAGAAACACA...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTTTTTCACTTGTAGCATaGTCAGATAGAGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFFSLVA*SDRESR
Trigger: CCTGCTTTCTCTATCTGAGCATGCTACAAGTGAAAA...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACGAAAGACGATGGAGGTaGAATCCTTTAAGATTATGT +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYERRWR*NPLRLC
Trigger: ACATAATCTTAAAGGATTCCACCTCCATCGTCTTTC...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGTTTTAATCTTGCTTaGGTTCCTTTTTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTSFNLA*VPFSVA
Trigger: TGCCACAGAAAAAGGAACCCAAGCAAGATTAAAACT...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCACTCTCAAAACCTGCTaGATAACAGCTCTATGCATT +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSTLKTC*ITALCI
Trigger: AATGCATAGAGCTGTTATCCAGCAGGTTTTGAGAGT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382224.5
CDS-3UTR CCA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACACTGAATGGCTGGAATaGTCTTTCACCAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDTEWLE*SFTNKN
Trigger: ATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGT...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTGTTCAACTGAATGGCTaGAATGGTCTTTCACCAATA +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGVQLNG*NGLSPI
Trigger: TATTGGTGAAAGACCATTCCAGCCATTCAGTTGAAC...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACCTTTTCTATTCCTGGTaGATGCACTTGAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNLFYSW*MHLSAF
Trigger: AAATGCACTCAAGTGCATCCACCAGGAATAGAAAAG...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCTTTCTTTTCTATTCCTaGTGGATGCACTTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSFLFYS*WMHLSA
Trigger: TGCACTCAAGTGCATCCACCAGGAATAGAAAAGAAA...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTGACCAAATAACTGCTTaGTTGTGTAGTTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGDQITA*LCSFSL
Trigger: GAGTGAGAAACTACACAACCAAGCAGTTATTTGGTC...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACGACCAAATAACTGCTTaGTTGTGTAGTTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNDQITA*LCSFSL
Trigger: GAGTGAGAAACTACACAACCAAGCAGTTATTTGGTC...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTGTACATTTTCAACACTaGAAATCAAGCGACCCATAT +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFVHFQH*KSSDPY
Trigger: ATATGGGTCGCTTGATTTCCAGTGTTGAAAATGTAC...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTATCAATTTTAGGCTTTaGTGGTCTTCCAATTGGTCG +
Preference number: 4 (lower is better)
Translates to: LGRCQHKCIINHEAARYIINFRL*WSSNWS
Trigger: CGACCAATTGGAAGACCACCAAAGCCTAAAATTGAT...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCCTAAAGGGCTCATTCTaGCAAACAGTGATGTTTGTT +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSLKGSF*QTVMFV
Trigger: AACAAACATCACTGTTTGCCAGAATGAGCCCTTTAG...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 4 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 4 (lower is better)
Translates to: HYSCILHKSNKDTLTHILRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACAGGATCACATATGGATaGCTCTTCAGATTTTATGCT +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNRITYG*LFRFYA
Trigger: AGCATAAAATCTGAAGAGTCATCCATATGTGATCCT...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR TCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAGAACTTACTCGTAGCTaGGGAATTTTTAACTGTACA +
Preference number: 4 (lower is better)
Translates to: HYSCILHKSNKDTLTHILELTRS*GIFNCT
Trigger: TGTACAGTTAAAAATTCCTCAGCTACGAGTAAGTTC...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACGAGGTTTTGGAAACTTaGTACATAACATCCAACAGA +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNEVLET*YITSNR
Trigger: TCTGTTGGATGTTATGTATCAAGTTTCCAAAACCTC...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACATCTATTCAAGACCCTaGACAAACTGCAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNIYSRP*TNCKFG
Trigger: ACCAAATTTGCAGTTTGTTCAGGGTCTTGAATAGAT...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR TCA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTAATCACATACTTCCTTTaGCAAAAGAGGACTACGAAA +
Preference number: 4 (lower is better)
Translates to: TIRNTNNPTHEPTMILILITYFL*QKRTTK
Trigger: TTTCGTAGTCCTCTTTTGTCAAAGGAAGTATGTGAT...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635767.1
CDS-3UTR TCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTATCACATACTTCCTTTaGCAAAAGAGGACTACGAAA +
Preference number: 4 (lower is better)
Translates to: LGRCQHKCIINHEAARYIITYFL*QKRTTK
Trigger: TTTCGTAGTCCTCTTTTGTCAAAGGAAGTATGTGAT...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCGCAAATAAAGTTTCTTaGCGCTTTCGAAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSANKVS*RFRNLV
Trigger: GACAAGATTTCGAAAGCGTCAAGAAACTTTATTTGC...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp CATCTCCACTTACTTGCACCCAAGCATTTGTTATTTGCTCAAATCTATTGTTTAGCAAATAAAGTTTCTTaGCGCTTTCGAAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: HLHLLAPKHLLFAQIYCLANKVS*RFRNLV
Trigger: GACAAGATTTCGAAAGCGTCAAGAAACTTTATTTGC...TAAACAATAGATTTGAGCAAATAACAAATGCTTGGGTGCAAGTAAGTGGAGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR TCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCTTCTCTTTCCTGAGGTaGAGTTCTATTAATAGTCAC +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSFSFLR*SSINSH
Trigger: GTGACTATTAATAGAACTTCACCTCAGGAAAGAGAA...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACGGTGGCAAAACACACTaGTTATCTACTATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNGGKTH*LSTMLF
Trigger: AAAAAGCATAGTAGATAATCAGTGTGTTTTGCCACC...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR TCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCTGTGTTCAAGACAGTTaGGCTTCCTCAAAAATATTC +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSCVQDS*ASSKIF
Trigger: GAATATTTTTGAGGAAGCTCAACTGTCTTGAACACA...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATCTGAAGGGAGTTTTCTaGTTGATTCATTTGGATACT +
Preference number: 4 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHLKGVF*LIHLDT
Trigger: AGTATCCAAATGAATCAAGCAGAAAACTCCCTTCAG...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATTGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNCEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTTGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFCEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTTGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTCEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR GCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTCTCCACAGACTTTGTaGTATAGCAATAATAGAGGT +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNSPQTL*YSNNRG
Trigger: ACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAGATGACCCTGACATCTaGTGTTCTGTAATCTATTAT +
Preference number: 4 (lower is better)
Translates to: HYSCILHKSNKDTLTHILDDPDI*CSVIYY
Trigger: ATAATAGATTACAGAACAGCAGATGTCAGGGTCATC...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCGATGACCCTGACATCTaGTGTTCTGTAATCTATTAT +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSDDPDI*CSVIYY
Trigger: ATAATAGATTACAGAACAGCAGATGTCAGGGTCATC...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTCATCTCCACTTACTTaGACCCAAGCATTTGTTATT +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNSSPLT*TQAFVI
Trigger: AATAACAAATGCTTGGGTGCAAGTAAGTGGAGATGA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTGAAAGTCTTTTTGGCTaGAATTTGTTCCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFESLFG*NLFHSL
Trigger: AAGAGAATGGAACAAATTGCAGCCAAAAAGACTTTC...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTTTTTACAACTGCTCATaGGTCAGGTTATCATCACAA +
Preference number: 4 (lower is better)
Translates to: LGRCQHKCIINHEAARYIFYNCS*VRLSSQ
Trigger: TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAA...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTTTGAAATTGACACTTaGCCTGACTTACGAAACTTG +
Preference number: 4 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHFEIDT*PDLRNL
Trigger: CAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTCAAA...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTTTGAAATTGACACTTaGCCTGACTTACGAAACTTG +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNFEIDT*PDLRNL
Trigger: CAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTCAAA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTTCTTTTGGACAGTTATaGTCCTCGTTTAATTACAAG +
Preference number: 4 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTSFGQL*SSFNYK
Trigger: CTTGTAATTAAACGAGGACCATAACTGTCCAAAAGA...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGAGTTTTAATCTTGCTTaGGTTCCTTTTTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SLLDSYGPRLITSFITSLSFNLA*VPFSVA
Trigger: TGCCACAGAAAAAGGAACCCAAGCAAGATTAAAACT...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCGCAGCATTCTGCTCTTaGACTAGAAATTTCAACATA +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSAAFCS*TRNFNI
Trigger: TATGTTGAAATTTCTAGTCCAAGAGCAGAATGCTGC...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACGGCTTGTCATATCCGTaGTTTCTATTGATTTTAGTT +
Preference number: 4 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYGLSYP*FLLILV
Trigger: AACTAAAATCAATAGAAACCACGGATATGACAAGCC...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTAGGCTTGTCATATCCGTaGTTTCTATTGATTTTAGTT +
Preference number: 4 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVGLSYP*FLLILV
Trigger: AACTAAAATCAATAGAAACCACGGATATGACAAGCC...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTCAAAGGCTTCTGATTTaGTCGAATAATGTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLQRLLI*SNNVLG
Trigger: TCCAAGAACATTATTCGACCAAATCAGAAGCCTTTG...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGCGAAAGTCTGTTTCTTaGGGTATCTTTGTAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SLLDSYGPRLITSFITSLRKSVS*GIFVSY
Trigger: ATAGCTTACAAAGATACCCCAAGAAACAGACTTTCG...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTTTACTATTGCCAAGATaGTCAGCAAATTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFLLLPR*SANSSA
Trigger: AGCTGATGAATTTGCTGACCATCTTGGCAATAGTAA...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
3UTR CAA 72 bp CAAGTAGGAGATACATGTGTTGAAAGGATTGTTGTGTaGAAGACAAAGGATTTAGTTAGCCTAGAAACTAGA +
Preference number: 4 (lower is better)
Translates to: QVGDTCVERIVV*KTKDLVSLETR
Trigger: TCTAGTTTCTAGGCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCCTACTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR CAA 72 bp TCTTTTGAAATTGACACTTGGCCTGACTTACGAAACTaGTACTATATGAAATTGGTCCTCTTTTCTGCAATA +
Preference number: 4 (lower is better)
Translates to: SFEIDTWPDLRN*YYMKLVLFSAI
Trigger: TATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTCAAAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
3UTR CAA 72 bp TTTCTTTTAAAAGATGGATCAGTAGCACTGCTTGAATaGTCCTTAGGTTCTTCTTGTGGCTTATCACTATTT +
Preference number: 4 (lower is better)
Translates to: FLLKDGSVALLE*SLGSSCGLSLF
Trigger: AAATAGTGATAAGCCACAAGAAGAACCTAAGGACAATTCAAGCAGTGCTACTGATCCATCTTTTAAAAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
3UTR CAA 72 bp TTCTTGTCAAAGTTAACACATTTGCTTAATTTACTATaGCCAAGATGGTCAGCAAATTCATCAGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: FLSKLTHLLNLL*PRWSANSSAEG
Trigger: TCCTTCAGCTGATGAATTTGCTGACCATCTTGGCAATAGTAAATTAAGCAAATGTGTTAACTTTGACAAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR GCA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCTGTGAATGGGAAACATaGTACTTGACAAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSCEWET*YLTKSY
Trigger: ATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACA...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGCTGAAAGGTATGTCATaGATGTCTAGAATATATGGA +
Preference number: 4 (lower is better)
Translates to: SLLDSYGPRLITSFITSLLKGMS*MSRIYG
Trigger: TCCATATATTCTAGACATGCATGACATACCTTTCAG...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR GCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCTTTATTTATGTCCAGTaGTCCAGACTGAATGTCTTT +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSFIYVQ*SRLNVF
Trigger: AAAGACATTCAGTCTGGAGCACTGGACATAAATAAA...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTATTTATTTATGTCCAGTaGTCCAGACTGAATGTCTTT +
Preference number: 4 (lower is better)
Translates to: HYSCILHKSNKDTLTHILFIYVQ*SRLNVF
Trigger: AAAGACATTCAGTCTGGAGCACTGGACATAAATAAA...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACTTTATTTATGTCCAGTaGTCCAGACTGAATGTCTTT +
Preference number: 4 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNFIYVQ*SRLNVF
Trigger: AAAGACATTCAGTCTGGAGCACTGGACATAAATAAA...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACGTGGATGCACTTGAGTaGATTTTGTATTTCATAGAA +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNVDALE*ILYFIE
Trigger: TTCTATGAAATACAAAATGCACTCAAGTGCATCCAC...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACTTTTACCACTACAGTTaGATACTCCATAAATCCAAC +
Preference number: 4 (lower is better)
Translates to: GICFITFYHYSCILHKSNFYHYS*ILHKSN
Trigger: GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAA...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR GCA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTTGTGTTTCTGTTGTTTaGATAAACCAAGTACAGAGT +
Preference number: 4 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFCVSVV*INQVQS
Trigger: ACTCTGTACTTGGTTTATGCAAACAACAGAAACACA...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR GCA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACGAGTTAGCCACTTTATaGAGTATATGCAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNELATL*SICNFS
Trigger: AGAGAAATTGCATATACTGCATAAAGTGGCTAACTC...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CCA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCACTGAATGGCTGGAATaGTCTTTCACCAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: EGICFITFYHYSCILHKSTEWLE*SFTNKN
Trigger: ATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS GCA 90 bp GCAGCGGCGGCGGCAGCGGCCATTCTCTCTCTTCCCTTGTCCATCTaGGTCCCGCGTCACGCGCCCTCATTTACATACGAGCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: AAAAAAAILSLPLSI*VPRHAPSFTYEQRR
Trigger: CCTGCGCTGCTCGTATGTAAATGAGGGCGCGTGACGCGGGACGCAGATGGACAAGGGAAGAGAGAGAATGGCCGCTGCCGCCGCCGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000382226.5
ENST00000635767.1
ENST00000675131.1
CDS TCA 90 bp GGTCGGGAGTCCCACCATTCCTGTCACCCTAAACAATCCACAGGGTaGGAGCCCCAAGCCCAGAAGTTTGAGGCAAAACGATTCAGATCC +
Preference number: 5 (lower is better)
Translates to: GRESHHSCHPKQSTG*EPQAQKFEAKRFRS
Trigger: GGATCTGAATCGTTTTGCCTCAAACTTCTGGGCTTGGGGCTCTCACCCTGTGGATTGTTTAGGGTGACAGGAATGGTGGGACTCCCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382224.5
CDS-3UTR CAA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTCACTGCGAGTGTGTTTaGTGCACAGGTAGATATTCT +
Preference number: 5 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPHCECV*CTGRYS
Trigger: AGAATATCTACCTGTGCACAAAACACACTCGCAGTG...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR CAA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR CAA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAACATGCAATTGTGCCATaGCTCTTAAAGCCCACAGAC +
Preference number: 5 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKHAIVP*LLKPTD
Trigger: GTCTGTGGGCTTTAAGAGCAATGGCACAATTGCATG...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTTCTTCAGAAAATGGTTaGGAAGGACTGAACACAGGA +
Preference number: 5 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPSSENG*EGLNTG
Trigger: TCCTGTGTTCAGTCCTTCCAAACCATTTTCTGAAGA...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCTTCTGTGCGCTCTGCTaGAGCTCTTGCCCACAAGGC +
Preference number: 5 (lower is better)
Translates to: LCFPLGEGGNILNNASSGFCALC*SSCPQG
Trigger: GCCTTGTGGGCAAGAGCTCAAGCAGAGCGCACAGAA...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAAAAGGGAGAACAACATTaGAATGGGAAGTGCCAACTG +
Preference number: 5 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKKGEQH*NGKCQL
Trigger: CAGTTGGCACTTCCCATTCAAATGTTGTTCTCCCTT...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTCTCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPLLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGAG...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR CAA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGACGGCGTGTTTGCTTTaGCCTATTAGCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMTACLL*PISWHG
Trigger: ACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGT...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGCTTCTTACGGCGTGTTaGCTTTTGCCTATTAGCTGG +
Preference number: 5 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGLLTAC*LLPISW
Trigger: CCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAG...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACGCTCTGCTTGAGCTCTaGCCCACAAGGCTACTTTTT +
Preference number: 5 (lower is better)
Translates to: KAHLNGAQRATCCILIRHALLEL*PTRLLF
Trigger: AAAAAGTAGCCTTGTGGGCAAGAGCTCAAGCAGAGC...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCGGCTTGCTGCTGTTTTaGCAGCTGCCAGTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: LCFPLGEGGNILNNASSGGLLLF*QLPVPE
Trigger: TTCAGGGACTGGCAGCTGCAAAAACAGCAGCAAGCC...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TGCTGTTTTTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTGGCTTGCTGCTGTTTTaGCAGCTGCCAGTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: CCFCSCQSLNLSYYITQCGLLLF*QLPVPE
Trigger: TTCAGGGACTGGCAGCTGCAAAAACAGCAGCAAGCC...ACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAAAAACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CAA 90 bp GGAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGTCAACTGTTCCATGGTaGTGCAGCTTTCCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GAMFSCGLPYQSLLSLAWSTVPW*CSFPSL
Trigger: AAGAGAGGGAAAGCTGCACAACCATGGAACAGTTGA...CCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CCAGTGTCAACCCTGATGCTCCCCCACCTCAGTATCTTCTTCTGGTCACCACCTTTTTTAACCATGCATTaGAGACTCCTTGTTATGCTC +
Preference number: 5 (lower is better)
Translates to: PVSTLMLPHLSIFFWSPPFLTMH*RLLVML
Trigger: GAGCATAACAAGGAGTCTCAAATGCATGGTTAAAAA...AGGTGGTGACCAGAAGAAGATACTGAGGTGGGGGAGCATCAGGGTTGACACTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR CAA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCATTCTCTCTCTTCCCTaGTCCATCTGCGTCCCGCGT +
Preference number: 5 (lower is better)
Translates to: VHLGNFLLGIQSYQCWTGILSLP*SICVPR
Trigger: ACGCGGGACGCAGATGGACAAGGGAAGAGAGAGAAT...GCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675131.1
CDS-3UTR CAA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCAGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 5 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TCAATGGGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTAGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 5 (lower is better)
Translates to: SMGRLRHILMGLKGQLAVGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...TACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCCCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CAA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCACGGCGTGTTTGCTTTaGCCTATTAGCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFTACLL*PISWHG
Trigger: ACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGT...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GGAAGTACCACAAACTGGCTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCTTCTTACGGCGTGTTaGCTTTTGCCTATTAGCTGG +
Preference number: 5 (lower is better)
Translates to: GSTTNWLERSLSITSEEDLLTAC*LLPISW
Trigger: CCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAG...GTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CAGTTTCAGCTAGGACGAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAATCACTGGATCGTTTTTaGTTGTGGATTCGGATACTT +
Preference number: 5 (lower is better)
Translates to: QFQLGRTGGVRLLKPTLKSLDRF*LWIRIL
Trigger: AAGTATCCGAATCCACAACAAAAAACGATCCAGTGA...TTTCAGAGTCGGCTTCAGCAGTCTGACACCTCCTGTTCGTCCTAGCTGAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGCAGGCTTCCTACTTATaGCCAAAGGCTTCTGATTTG +
Preference number: 5 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGQASYL*PKASDL
Trigger: CAAATCAGAAGCCTTTGGCAATAAGTAGGAAGCCTG...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCCAGAGATTTTCACTTTaGCCGGTCTACCAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGQRFSL*PVYQAS
Trigger: GGAAGCCTGGTAGACCGGCAAAAGTGAAAATCTCTG...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GTCAGGCATTACTACCCTCTGCTGCAAGTCACCCCTGATCTCAGGTGGCAAAACAAACTAGCATGTATTTaGAAGTCAGGCATTACTACC +
Preference number: 5 (lower is better)
Translates to: VRHYYPLLQVTPDLRWQNKLACI*KSGITT
Trigger: GGTAGTAATGCCTGACTTCAAAATACATGCTAGTTT...GTTTTGCCACCTGAGATCAGGGGTGACTTGCAGCAGAGGGTAGTAATGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CAA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCATTCTCTCTCTTCCCTaGTCCATCTGCGTCCCGCGT +
Preference number: 5 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPILSLP*SICVPR
Trigger: ACGCGGGACGCAGATGGACAAGGGAAGAGAGAGAAT...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACATTCTCTCTCTTCCCTaGTCCATCTGCGTCCCGCGT +
Preference number: 5 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDILSLP*SICVPR
Trigger: ACGCGGGACGCAGATGGACAAGGGAAGAGAGAGAAT...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382226.5
CDS-3UTR CAA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGATTCTCTCTCTTCCCTaGTCCATCTGCGTCCCGCGT +
Preference number: 5 (lower is better)
Translates to: IVQKKCASVSHTDLSQSEILSLP*SICVPR
Trigger: ACGCGGGACGCAGATGGACAAGGGAAGAGAGAGAAT...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCAGCTCCTCTGTTGGTGTaGACTGTGAAGAATCAAGAG +
Preference number: 5 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSAPLLV*TVKNQE
Trigger: CTCTTGATTCTTCACAGTCAACACCAACAGAGGAGC...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 5 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CAA 90 bp CAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 5 (lower is better)
Translates to: QKKCASVSHTDLSQSEVGGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...GCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCCATGCAATTGTGCCATaGCTCTTAAAGCCCACAGAC +
Preference number: 5 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGHAIVP*LLKPTD
Trigger: GTCTGTGGGCTTTAAGAGCAATGGCACAATTGCATG...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGTGTTCTTCATTCTGTTaGTTGGCTCTGTGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGCSSFC*LALCSP
Trigger: AGGAGAACACAGAGCCAACAAACAGAATGAAGAACA...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGTGTTCTTCATTCTGTTaGTTGGCTCTGTGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LGIQSYQCWTGPEMIAPLCSSFC*LALCSP
Trigger: AGGAGAACACAGAGCCAACAAACAGAATGAAGAACA...CAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CAA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGCGCTTCCACGTTACTTaGGCCTGTATTAAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMRFHVT*ACIKAV
Trigger: TACTGCTTTAATACAGGCCAAAGTAACGTGGAAGCG...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAACGGCGTGTTTGCTTTaGCCTATTAGCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQTACLL*PISWHG
Trigger: ACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGT...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCCTTCTTACGGCGTGTTaGCTTTTGCCTATTAGCTGG +
Preference number: 5 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFLLTAC*LLPISW
Trigger: CCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAG...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGCATCATCAAGAGCATTaGACTTCTTACGGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGHHQEH*TSYGVF
Trigger: AAACACGCCGTAAGAAGTCAAATGCTCTTGATGATG...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTTTCTGTGCGCTCTGCTaGAGCTCTTGCCCACAAGGC +
Preference number: 5 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTFCALC*SSCPQG
Trigger: GCCTTGTGGGCAAGAGCTCAAGCAGAGCGCACAGAA...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR CAA 90 bp TTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATTTGGTAGGAGACCTCTaGGAGACCCAGATGCTTGAA +
Preference number: 5 (lower is better)
Translates to: LQLPVPESVILYNPVSGNLVGDL*ETQMLE
Trigger: TTCAAGCATCTGGGTCTCCAAGAGGTCTCCTACCAA...ATTACCAGACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CAA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGCAGAGATTTTCACTTTaGCCGGTCTACCAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLQRFSL*PVYQAS
Trigger: GGAAGCCTGGTAGACCGGCAAAAGTGAAAATCTCTG...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGCATTTGAGTGCACTGTaGGTCATACTTTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LGIQSYQCWTGPEMIAPLHLSAL*VILFFR
Trigger: CCTGAAGAAAAGTATGACCAACAGTGCACTCAAATG...CAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CAA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCAGCCATTTGTCCACTGTaGCAAGACTGTCGTTTATGT +
Preference number: 5 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSAICPL*QDCRLC
Trigger: ACATAAACGACAGTCTTGCAACAGTGGACAAATGGC...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCAATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CAA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCTTCATTCTGTTTGTaGGCTCTGTGTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSSSFCL*ALCSPV
Trigger: CACAGGAGAACACAGAGCCAACAAACAGAATGAAGA...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp AGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGTGGGCCTCTTCATTCTGTTTGTaGGCTCTGTGTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: RKSVHQSVTQIYHNLRWASSFCL*ALCSPV
Trigger: CACAGGAGAACACAGAGCCAACAAACAGAATGAAGA...GGCCCACCTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCTGTTCTTCATTCTGTTaGTTGGCTCTGTGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIICSSFC*LALCSP
Trigger: AGGAGAACACAGAGCCAACAAACAGAATGAAGAACA...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGTATATGGGAGTCCTaGTTTGTGAATGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMCIWES*FVNVSW
Trigger: CCAGGAAACATTCACAAACAAGGACTCCCATATACA...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTACGGCGTGTTTGCTTTaGCCTATTAGCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVTACLL*PISWHG
Trigger: ACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGT...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGACGGCGTGTTTGCTTTaGCCTATTAGCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMTACLL*PISWHG
Trigger: ACCATGCCAGCTAATAGGCAAAAGCAAACACGCCGT...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCCCCAAGCCCAGAAGTTaGAGGCAAAACGATTCAGAT +
Preference number: 5 (lower is better)
Translates to: LCFPLGEGGNILNNASSGPKPRS*RQNDSD
Trigger: ATCTGAATCGTTTTGCCTCAAACTTCTGGGCTTGGG...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382224.5
CDS-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCCCACAAGGCTACTTTTaGCAGCACTGCACAAGTTTC +
Preference number: 5 (lower is better)
Translates to: LCFPLGEGGNILNNASSGPQGYF*QHCTSF
Trigger: GAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTGG...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCTGGTAATCCACAAGGCTACTTTTaGCAGCACTGCACAAGTTTC +
Preference number: 5 (lower is better)
Translates to: LQLPVPESVILYNPVSGNPQGYF*QHCTSF
Trigger: GAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTGG...ATTACCAGACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CAA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTTCTGTGCGCTCTGCTaGAGCTCTTGCCCACAAGGC +
Preference number: 5 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGFCALC*SSCPQG
Trigger: GCCTTGTGGGCAAGAGCTCAAGCAGAGCGCACAGAA...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACTTCTGTGCGCTCTGCTaGAGCTCTTGCCCACAAGGC +
Preference number: 5 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNFCALC*SSCPQG
Trigger: GCCTTGTGGGCAAGAGCTCAAGCAGAGCGCACAGAA...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCAGTAAGAGTCAACACTaGAGTGAGTTACAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LCFPLGEGGNILNNASSGSKSQH*SELQAQ
Trigger: CTGGGCCTGTAACTCACTCAAGTGTTGACTCTTACT...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CTTTGCTTTCCATTGGGGGAAGGGGGAAATATACTAAATAATGCAAGTTCTGGCGTAATCTACACAGGCTaGCTGCTGTTTTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LCFPLGEGGNILNNASSGVIYTG*LLFLQL
Trigger: CAGCTGCAAAAACAGCAGCAAGCCTGTGTAGATTAC...GCCAGAACTTGCATTATTTAGTATATTTCCCCCTTCCCCCAATGGAAAGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCAAGGGAGAACAACATTaGAATGGGAAGTGCCAACTG +
Preference number: 5 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFKGEQH*NGKCQL
Trigger: CAGTTGGCACTTCCCATTCAAATGTTGTTCTCCCTT...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGGTAGCACTGCTTGAATaGTCCTTAGGTTCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMVALLE*SLGSSC
Trigger: ACAAGAAGAACCTAAGGACAATTCAAGCAGTGCTAC...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTACTATGCTTTTTCCTaGGAGTGGGATGTCAGCATT +
Preference number: 5 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMYYAFS*EWDVSI
Trigger: AATGCTGACATCCCACTCCAAGGAAAAAGCATAGTA...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCATACTATGCTTTTTCCTaGGAGTGGGATGTCAGCATT +
Preference number: 5 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPYYAFS*EWDVSI
Trigger: AATGCTGACATCCCACTCCAAGGAAAAAGCATAGTA...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIILSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 5 (lower is better)
Translates to: VHLGNFLLGIQSYQCWTGGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...GCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CAA 90 bp GAGCCATGTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGTGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 5 (lower is better)
Translates to: EPCSHVVYHTKACFLWHGWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...CCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAACATGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCTCTTGTCTTTTGAAATaGACACTTGGCCTGACTTAC +
Preference number: 5 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIISCLLK*TLGLTY
Trigger: GTAAGTCAGGCCAAGTGTCAATTTCAAAAGACAAGA...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GGAAGTACCACAAACTGGCTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACTCTTGTCTTTTGAAATaGACACTTGGCCTGACTTAC +
Preference number: 5 (lower is better)
Translates to: GSTTNWLERSLSITSEEDSCLLK*TLGLTY
Trigger: GTAAGTCAGGCCAAGTGTCAATTTCAAAAGACAAGA...GTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTGTATATGGGAGTCCTaGTTTGTGAATGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFCIWES*FVNVSW
Trigger: CCAGGAAACATTCACAAACAAGGACTCCCATATACA...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TCATCCATAGACCAGTCAGTCAGCTCTTCTGGTTCACAGTCTTCAAATAAACTGCGCTTCCACGTTACTTaGGCCTGTATTAAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: SSIDQSVSSSGSQSSNKLRFHVT*ACIKAV
Trigger: TACTGCTTTAATACAGGCCAAAGTAACGTGGAAGCG...CAGTTTATTTGAAGACTGTGAACCAGAAGAGCTGACTGACTGGTCTATGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675131.1
CDS-3UTR CAA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGCGCTTCCACGTTACTTaGGCCTGTATTAAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLRFHVT*ACIKAV
Trigger: TACTGCTTTAATACAGGCCAAAGTAACGTGGAAGCG...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CTTGGCATTCAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGAAGAAGAAGTTACCCTaGTCAAAATCAGAACAAACC +
Preference number: 5 (lower is better)
Translates to: LGIQSYQCWTGPEMIAPLKKKLP*SKSEQT
Trigger: GGTTTGTTCTGATTTTGACAAGGGTAACTTCTTCTT...CAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTGAATGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CAA 90 bp GGAAGTACCACAAACTGGCTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACGAGTCTCCACAGACTTaGTGCTATAGCAATAATAGA +
Preference number: 5 (lower is better)
Translates to: GSTTNWLERSLSITSEEDESPQT*CYSNNR
Trigger: TCTATTATTGCTATAGCACAAAGTCTGTGGAGACTC...GTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAGCCAGTTTGTGGTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGATCACAAGCCAAACTTaGTCTTACTCCTTAACCTTG +
Preference number: 5 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMITSQT*SYSLTL
Trigger: CAAGGTTAAGGAGTAAGACAAAGTTTGGCTTGTGAT...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAGGCTTGCTGCTGTTTTaGCAGCTGCCAGTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: HYSCILHKSNKDTLTHILGLLLF*QLPVPE
Trigger: TTCAGGGACTGGCAGCTGCAAAAACAGCAGCAAGCC...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCACTTCCAAACACTTTTTaGCATTCCGCGAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSLPNTF*HSAKVC
Trigger: ACAGACTTTCGCGGAATGCAAAAAAGTGTTTGGAAG...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTTCAACTGTTCCATGGTaGTGCAGCTTTCCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVSTVPW*CSFPSL
Trigger: AAGAGAGGGAAAGCTGCACAACCATGGAACAGTTGA...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTCAACTGTTCCATGGTaGTGCAGCTTTCCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCSTVPW*CSFPSL
Trigger: AAGAGAGGGAAAGCTGCACAACCATGGAACAGTTGA...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CAA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCAAAATAGTTTGCCATTaGTCCACTGTTGCAAGACTG +
Preference number: 5 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIIKIVCH*STVARL
Trigger: CAGTCTTGCAACAGTGGACAAATGGCAAACTATTTT...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637787.1
ENST00000675131.1
ENST00000676061.1
CDS-3UTR CAA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAACCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 5 (lower is better)
Translates to: IVQKKCASVSHTDLSQSEGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCTTCGCTTTTGAGATTTaGGTTATGAACTGTACAGCT +
Preference number: 5 (lower is better)
Translates to: RGSWYPPVLQLLMGQVIIFAFEI*VMNCTA
Trigger: AGCTGTACAGTTCATAACCAAAATCTCAAAAGCGAA...GATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp CACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACTTCGCTTTTGAGATTTaGGTTATGAACTGTACAGCT +
Preference number: 5 (lower is better)
Translates to: HTWPGYPKRKEPCSHVVYFAFEI*VMNCTA
Trigger: AGCTGTACAGTTCATAACCAAAATCTCAAAAGCGAA...GTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATTCGCTTTTGAGATTTaGGTTATGAACTGTACAGCT +
Preference number: 5 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSFAFEI*VMNCTA
Trigger: AGCTGTACAGTTCATAACCAAAATCTCAAAAGCGAA...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CAA 90 bp GGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: GRLRHILMGLKGQLAVFSFSFTN*LRGSWY
Trigger: ATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAA...TGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CAA 90 bp TCAATGGGACGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 5 (lower is better)
Translates to: SMGRLRHILMGLKGQLAVWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...TACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCGTCCCATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CAA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATATCTTCATTCTGTTTGTaGGCTCTGTGTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKISSFCL*ALCSPV
Trigger: CACAGGAGAACACAGAGCCAACAAACAGAATGAAGA...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TTCGAGGTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCTTGTCTTTTGAAATaGACACTTGGCCTGACTTAC +
Preference number: 5 (lower is better)
Translates to: FEVVGIHLFYNCSWVRLSSCLLK*TLGLTY
Trigger: GTAAGTCAGGCCAAGTGTCAATTTCAAAAGACAAGA...TGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGTGTATATGGGAGTCCTaGTTTGTGAATGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLCIWES*FVNVSW
Trigger: CCAGGAAACATTCACAAACAAGGACTCCCATATACA...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACAAGAAGAAGTTACCCTaGTCAAAATCAGAACAAACC +
Preference number: 5 (lower is better)
Translates to: KAHLNGAQRATCCILIRHKKKLP*SKSEQT
Trigger: GGTTTGTTCTGATTTTGACAAGGGTAACTTCTTCTT...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CAA 90 bp CTAAAATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCAAAGAAATCTCTTTaGGACAGTTATGGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: LKSHSHMARLSKKKGAMFSKKSL*DSYGPR
Trigger: ACGAGGACCATAACTGTCCAAAAGAGATTTCTTTGA...GAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGATTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGCATCATCAAGAGCATTaGACTTCTTACGGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQHHQEH*TSYGVF
Trigger: AAACACGCCGTAAGAAGTCAAATGCTCTTGATGATG...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CAA 90 bp TTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTATCACAAGCCAAACTTaGTCTTACTCCTTAACCTTG +
Preference number: 5 (lower is better)
Translates to: FTHGQAIQKERSHVLMWFITSQT*SYSLTL
Trigger: CAAGGTTAAGGAGTAAGACAAAGTTTGGCTTGTGAT...AAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTAAGAGGGAATTGCAGTaGAATGGGGATGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGKRELQ*NGDGRW
Trigger: CCACCTCCCATCCCCATTCAACTGCAATTCCCTCTT...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382224.5
CDS-3UTR CAA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCATGTCTTTCAAAGCTTTaGAGAGCAAACCATCTGCAA +
Preference number: 5 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSCLSKL*RANHLQ
Trigger: TTGCAGATGGTTTGCTCTCAAAAGCTTTGAAAGACA...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR CAA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTGCTCTGCTTGAGCTCTaGCCCACAAGGCTACTTTTT +
Preference number: 5 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTALLEL*PTRLLF
Trigger: AAAAAGTAGCCTTGTGGGCAAGAGCTCAAGCAGAGC...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCATCACTTGTAGCATGCTaGCTGAGTATTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSSLVAC*LSILFL
Trigger: CAAGAACAAAATACTCAGCAAGCATGCTACAAGTGA...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510451.5
CDS-3UTR CAA 90 bp GATCTAACACTCCATCCCCTTGCTGAGTATTTTGTTCTTGCATTCGATTCACAGCATAGCCAAAACTTGTaGCTGGTGATGTATGCACAA +
Preference number: 5 (lower is better)
Translates to: DLTLHPLAEYFVLAFDSQHSQNL*LVMYAQ
Trigger: TTGTGCATACATCACCAGCAACAAGTTTTGGCTATG...CTGTGAATCGAATGCAAGAACAAAATACTCAGCAAGGGGATGGAGTGTTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CAA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAGGTGAATCAGAGGAGTaGCGCATTGCAAATAAAGTT +
Preference number: 5 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQGESEE*RIANKV
Trigger: AACTTTATTTGCAATGCGCAACTCCTCTGATTCACC...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGGTAGCACTGCTTGAATaGTCCTTAGGTTCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLVALLE*SLGSSC
Trigger: ACAAGAAGAACCTAAGGACAATTCAAGCAGTGCTAC...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATCCCATTCACACATGGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGCCTTATTTTATCCATTaGAGTGCACTGTTGGTCATA +
Preference number: 5 (lower is better)
Translates to: IPFTHGQAIQKERSHVLMPYFIH*SALLVI
Trigger: TATGACCAACAGTGCACTCAAATGGATAAAATAAGG...CATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCCATGTGTGAATGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GGCCAGGCTATCCAAAAAGAAAGGAGCCATGTTCTCATGTGGTTTACCATACCACTTGCACCCAAGCATTaGTTATTTGCTCAAATCTAT +
Preference number: 5 (lower is better)
Translates to: GQAIQKERSHVLMWFTIPLAPKH*LFAQIY
Trigger: ATAGATTTGAGCAAATAACAAATGCTTGGGTGCAAG...TGGTATGGTAAACCACATGAGAACATGGCTCCTTTCTTTTTGGATAGCCTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp AAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAGACACAAACTAGCATGTATTTaGAAGTCAGGCATTACTACC +
Preference number: 5 (lower is better)
Translates to: KAHLNGAQRATCCILIRHKLACI*KSGITT
Trigger: GGTAGTAATGCCTGACTTCAAAATACATGCTAGTTT...GTGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTGCCATTTGTCCACTGTaGCAAGACTGTCGTTTATGT +
Preference number: 5 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCAICPL*QDCRLC
Trigger: ACATAAACGACAGTCTTGCAACAGTGGACAAATGGC...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CAA 90 bp ATCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: IPKYLETKQHISRQGLAMMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...CATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR CAA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTCCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR CAA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCATTCGCTTTTGAGATTTaGGTTATGAACTGTACAGCT +
Preference number: 5 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSFAFEI*VMNCTA
Trigger: AGCTGTACAGTTCATAACCAAAATCTCAAAAGCGAA...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510451.5
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675605.1
CDS-3UTR CAA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATATGTTCTTCATTCTGTTaGTTGGCTCTGTGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKICSSFC*LALCSP
Trigger: AGGAGAACACAGAGCCAACAAACAGAATGAAGAACA...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCCGCTTCCACGTTACTTaGGCCTGTATTAAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPRFHVT*ACIKAV
Trigger: TACTGCTTTAATACAGGCCAAAGTAACGTGGAAGCG...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCCTTATGTGTTGTTGTCAAAGAAATCTCTTTaGGACAGTTATGGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: FCLLALCSPVLQIPYVLLSKKSL*DSYGPR
Trigger: ACGAGGACCATAACTGTCCAAAAGAGATTTCTTTGA...CAACAACACATAAGGAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCCTTCTTACGGCGTGTTaGCTTTTGCCTATTAGCTGG +
Preference number: 5 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSLLTAC*LLPISW
Trigger: CCAGCTAATAGGCAAAAGCAAACACGCCGTAAGAAG...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATACATCATCAAGAGCATTaGACTTCTTACGGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKIHHQEH*TSYGVF
Trigger: AAACACGCCGTAAGAAGTCAAATGCTCTTGATGATG...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCATTAGTCCCATATTGTaGGATGTTTTCTTGGGGATA +
Preference number: 5 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGISPIL*DVFLGI
Trigger: TATCCCCAAGAAAACATCCAACAATATGGGACTAAT...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp CGATTAAGGCACATCTTAATGGGGCTCAAAGGGCAACTTGCTGTATTCTCATCAATTAGTCCCATATTGTaGGATGTTTTCTTGGGGATA +
Preference number: 5 (lower is better)
Translates to: RLRHILMGLKGQLAVFSSISPIL*DVFLGI
Trigger: TATCCCCAAGAAAACATCCAACAATATGGGACTAAT...TGATGAGAATACAGCAAGTTGCCCTTTGAGCCCCATTAAGATGTGCCTTAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACGCTCTGCTTGAGCTCTaGCCCACAAGGCTACTTTTT +
Preference number: 5 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNALLEL*PTRLLF
Trigger: AAAAAGTAGCCTTGTGGGCAAGAGCTCAAGCAGAGC...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTAGTAAGAGTCAACACTaGAGTGAGTTACAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTSKSQH*SELQAQ
Trigger: CTGGGCCTGTAACTCACTCAAGTGTTGACTCTTACT...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TGCTGTTTTTGCAGCTGCCAGTCCCTGAATCTGTCATATTATATAACCCAGTGTCAAATAACTGCTTGGTaGTGTAGTTTCTCACTCTTC +
Preference number: 5 (lower is better)
Translates to: CCFCSCQSLNLSYYITQCQITAW*CSFSLF
Trigger: GAAGAGTGAGAAACTACACAACCAAGCAGTTATTTG...ACACTGGGTTATATAATATGACAGATTCAGGGACTGGCAGCTGCAAAAACAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CAA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACTGGAGACCCAGATGCTaGAATCAGCTTTCTTTCGAA +
Preference number: 5 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDWRPRC*NQLSFE
Trigger: TTCGAAAGAAAGCTGATTCAAGCATCTGGGTCTCCA...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CAA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTGCGAAAGTCTGTTTCTaGGGGTATCTTTGTAAGCTA +
Preference number: 5 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVAKVCF*GYLCKL
Trigger: TAGCTTACAAAGATACCCCAAGAAACAGACTTTCGC...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGCTTCCAAACACTTTTTaGCATTCCGCGAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMLPNTF*HSAKVC
Trigger: ACAGACTTTCGCGGAATGCAAAAAAGTGTTTGGAAG...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAACTGTGTTTCTGTTGTTaGCATAAACCAAGTACAGAG +
Preference number: 5 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQLCFCC*HKPSTE
Trigger: CTCTGTACTTGGTTTATGCAAACAACAGAAACACAG...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTACTATGCTTTTTCCTaGGAGTGGGATGTCAGCATT +
Preference number: 5 (lower is better)
Translates to: IPKYLETKQHISRQGLAMYYAFS*EWDVSI
Trigger: AATGCTGACATCCCACTCCAAGGAAAAAGCATAGTA...CATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CAA 90 bp AAACCTGATGTCTTTCTGAAGATTTTCTGCTGTGCGCTTCCACGTTACTTTGGCCTTTTTGGCTGCAATTaGTTCCATTCTCTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: KPDVFLKIFCCALPRYFGLFGCN*FHSLLL
Trigger: AAGCAAAAGAGAATGGAACAAATTGCAGCCAAAAAG...GCCAAAGTAACGTGGAAGCGCACAGCAGAAAATCTTCAGAAAGACATCAGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCAAAATAGTTTGCCATTaGTCCACTGTTGCAAGACTG +
Preference number: 5 (lower is better)
Translates to: KYLETKQHISRQGLAMLPKIVCH*STVARL
Trigger: CAGTCTTGCAACAGTGGACAAATGGCAAACTATTTT...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CAA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAGGAAGATCCAACCATaGGTAGGAGACCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: EGICFITFYHYSCILHKSRKIQP*VGDLLE
Trigger: CTCCAAGAGGTCTCCTACCAATGGTTGGATCTTCCT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CAA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: VHLGNFLLGIQSYQCWTGLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...GCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510451.5
ENST00000637787.1
ENST00000675131.1
CDS-3UTR CAA 90 bp TCCCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: SLNIWKLNNTSLGRVLPCLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...ACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS-3UTR CAA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCCCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TGGCTTATCACTATTTATATCACCTATAAACATTGTAGAGGATCCTGCAGTTTCGGCTCAAAGGGCAACTaGCTGTATTCTCATCAGACA +
Preference number: 5 (lower is better)
Translates to: WLITIYITYKHCRGSCSFGSKGN*LYSHQT
Trigger: TGTCTGATGAGAATACAGCAAGTTGCCCTTTGAGCC...GAAACTGCAGGATCCTCTACAATGTTTATAGGTGATATAAATAGTGATAAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CAA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAATTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQFSFTN*LRGSWY
Trigger: ATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAA...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp GTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCACTATTCACTGTTCTTCATTCTGTTTGTaGGCTCTGTGTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: VTGTSLYIRYQFMSTIHCSSFCL*ALCSPV
Trigger: CACAGGAGAACACAGAGCCAACAAACAGAATGAAGA...ACAGTGAATAGTGCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTGTATATGGGAGTCCTaGTTTGTGAATGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLCIWES*FVNVSW
Trigger: CCAGGAAACATTCACAAACAAGGACTCCCATATACA...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTCGCTTCCACGTTACTTaGGCCTGTATTAAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFRFHVT*ACIKAV
Trigger: TACTGCTTTAATACAGGCCAAAGTAACGTGGAAGCG...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAACAAATTAGTCCCATATaGTTGGATGTTTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LERSLSITSEEDQYNVQQQISPI*LDVFLG
Trigger: CCCCAAGAAAACATCCAACAATATGGGACTAATTTG...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACACCAAAAAGAGGGAATaGCAGTTGAATGGGGATGGG +
Preference number: 5 (lower is better)
Translates to: GICFITFYHYSCILHKSNTKKRE*QLNGDG
Trigger: CCCATCCCCATTCAACTGCAATTCCCTCTTTTTGGT...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382224.5
CDS-3UTR CAA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTCCACAAGGCTACTTTTaGCAGCACTGCACAAGTTTC +
Preference number: 5 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGPQGYF*QHCTSF
Trigger: GAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTGG...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTCCACAAGGCTACTTTTaGCAGCACTGCACAAGTTTC +
Preference number: 5 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLPQGYF*QHCTSF
Trigger: GAAACTTGTGCAGTGCTGCAAAAAGTAGCCTTGTGG...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675605.1
CDS-3UTR CAA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAGTAAGAGTCAACACTaGAGTGAGTTACAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: EGICFITFYHYSCILHKSSKSQH*SELQAQ
Trigger: CTGGGCCTGTAACTCACTCAAGTGTTGACTCTTACT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACTATTTCATGATCATATaGCCGATAGCGGCCACGTTT +
Preference number: 5 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDYFMII*PIAATF
Trigger: AAACGTGGCCGCTATCGGCAATATGATCATGAAATA...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTAGTAATCTACACAGGCTaGCTGCTGTTTTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: HYSCILHKSNKDTLTHILVIYTG*LLFLQL
Trigger: CAGCTGCAAAAACAGCAGCAAGCCTGTGTAGATTAC...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCTGCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: VHLGNFLLGIQSYQCWTGCLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGCA...GCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510451.5
CDS-3UTR CAA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAGAGGAGTTGCGCATaGCAAATAAAGTTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLQRSCA*QIKFLD
Trigger: GTCAAGAAACTTTATTTGCAATGCGCAACTCCTCTG...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GTTCTCATGTGGTTTACCATACCAAAGCTTGCTTTCTCTGGCATGGGAAAAATAATGCTACCACAGATTTaGATAAGCTCTGTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: VLMWFTIPKLAFSGMGKIMLPQI*ISSVLC
Trigger: GCAAAGAACAGAGCTTATCAAAATCTGTGGTAGCAT...TATTTTTCCCATGCCAGAGAAAGCAAGCTTTGGTATGGTAAACCACATGAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GTAGTTGGTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAACAGTACCTTCATATTTaGCTGGTACATTTTCAACAC +
Preference number: 5 (lower is better)
Translates to: VVGIHLFYNCSWVRLSSQQYLHI*LVHFQH
Trigger: GTGTTGAAAATGTACCAGCAAAATATGAAGGTACTG...TTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCGCGAAAGTCTGTTTCTaGGGGTATCTTTGTAAGCTA +
Preference number: 5 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLAKVCF*GYLCKL
Trigger: TAGCTTACAAAGATACCCCAAGAAACAGACTTTCGC...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CTGGTACCAAGATGGCTAGAACAAGTAGGAGATACATGTGTTGAAAGGATTGTTTTCATCTCCACTTACTaGCACCCAAGCATTTGTTAT +
Preference number: 5 (lower is better)
Translates to: LVPRWLEQVGDTCVERIVFISTY*HPSICY
Trigger: ATAACAAATGCTTGGGTGCAAGTAAGTGGAGATGAA...AACAATCCTTTCAACACATGTATCTCCTACTTGTTCTAGCCATCTTGGTACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCTGTGTTTCTGTTGTTaGCATAAACCAAGTACAGAG +
Preference number: 5 (lower is better)
Translates to: PKYLETKQHISRQGLAMLLCFCC*HKPSTE
Trigger: CTCTGTACTTGGTTTATGCAAACAACAGAAACACAG...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CAA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCAAACTAGCATGTATTTaGAAGTCAGGCATTACTACC +
Preference number: 5 (lower is better)
Translates to: KYLETKQHISRQGLAMLPKLACI*KSGITT
Trigger: GGTAGTAATGCCTGACTTCAAAATACATGCTAGTTT...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CAA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCCTTTTTGGCTGCAATTaGTTCCATTCTCTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: KYLETKQHISRQGLAMLPLFGCN*FHSLLL
Trigger: AAGCAAAAGAGAATGGAACAAATTGCAGCCAAAAAG...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CAA 90 bp AAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGCCCCTGTGTTCAAGACAGTaGAGCTTCCTCAAAAATATT +
Preference number: 5 (lower is better)
Translates to: KYLETKQHISRQGLAMLPLCSRQ*SFLKNI
Trigger: AATATTTTTGAGGAAGCTCAACTGTCTTGAACACAG...GGGCAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CAA 90 bp CTGAAAGGTATGTCATGCATGTCTAGAATATATGGAGGCCTATCTTCACTTTTTATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: LKGMSCMSRIYGGLSSLFMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...AAAAAGTGAAGATAGGCCTCCATATATTCTAGACATGCATGACATACCTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCCCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACCCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATCCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTCCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGTGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 5 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGCCTGACTTACGAAACTaGTACTATATGAAATTGGTC +
Preference number: 5 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMPDLRN*YYMKLV
Trigger: GACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CTAGAAAGGAGCTTATCAATCACCAGTGAGGAAGACCAGTATAACGTTCAACAACCTGACTTACGAAACTaGTACTATATGAAATTGGTC +
Preference number: 5 (lower is better)
Translates to: LERSLSITSEEDQYNVQQPDLRN*YYMKLV
Trigger: GACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG...TTGTTGAACGTTATACTGGTCTTCCTCACTGGTGATTGATAAGCTCCTTTCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTTGTATATGGGAGTCCTaGTTTGTGAATGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTCIWES*FVNVSW
Trigger: CCAGGAAACATTCACAAACAAGGACTCCCATATACA...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ATGATTGTTCTTCATTCTGTTTGTTGGCTCTGTGTTCTCCTGTGCTTCAGATTCAAGAAGAAGTTACCCTaGTCAAAATCAGAACAAACC +
Preference number: 5 (lower is better)
Translates to: MIVLHSVCWLCVLLCFRFKKKLP*SKSEQT
Trigger: GGTTTGTTCTGATTTTGACAAGGGTAACTTCTTCTT...GAATCTGAAGCACAGGAGAACACAGAGCCAACAAACAGAATGAAGAACAATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGTCAAAGAAATCTCTTTaGGACAGTTATGGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: IVQKKCASVSHTDLSQSESKKSL*DSYGPR
Trigger: ACGAGGACCATAACTGTCCAAAAGAGATTTCTTTGA...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCGAGTCTCCACAGACTTaGTGCTATAGCAATAATAGA +
Preference number: 5 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPESPQT*CYSNNR
Trigger: TCTATTATTGCTATAGCACAAAGTCTGTGGAGACTC...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GAAATTGACACTTGGCCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCGAGTCTCCACAGACTTaGTGCTATAGCAATAATAGA +
Preference number: 5 (lower is better)
Translates to: EIDTWPDLRNLYYMKLVLESPQT*CYSNNR
Trigger: TCTATTATTGCTATAGCACAAAGTCTGTGGAGACTC...GAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGGCCAAGTGTCAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TGCTTACTGTCTTTTCGATCTAATCCATCTTCAGTATTTTCAGAGGTTCCATCATATTTCATGATCATATaGCCGATAGCGGCCACGTTT +
Preference number: 5 (lower is better)
Translates to: CLLSFRSNPSSVFSEVPSYFMII*PIAATF
Trigger: AAACGTGGCCGCTATCGGCAATATGATCATGAAATA...TGATGGAACCTCTGAAAATACTGAAGATGGATTAGATCGAAAAGACAGTAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS-3UTR CAA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTCATAGCCAAAACTTGTaGCTGGTGATGTATGCACAA +
Preference number: 5 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTHSQNL*LVMYAQ
Trigger: TTGTGCATACATCACCAGCAACAAGTTTTGGCTATG...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCGGTGAATCAGAGGAGTaGCGCATTGCAAATAAAGTT +
Preference number: 5 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSGESEE*RIANKV
Trigger: AACTTTATTTGCAATGCGCAACTCCTCTGATTCACC...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp GTGCATTTAGGTAATTTTCTGCTTGGCATTCAATCTTATCAGTGTTGGACTGGCGTCCTTAGGTTCTTCTaGTGGCTTATCACTATTTAT +
Preference number: 5 (lower is better)
Translates to: VHLGNFLLGIQSYQCWTGVLRFF*WLITIY
Trigger: ATAAATAGTGATAAGCCACAAGAAGAACCTAAGGAC...GCCAGTCCAACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CAA 90 bp TTTAATCTTGCTTGGGTTCCTTTTTCTGTGGCAGTGATAACTGGTACCAAGATGATCACAGATTTGTTCTaGATGGGTCTCACATATTCA +
Preference number: 5 (lower is better)
Translates to: FNLAWVPFSVAVITGTKMITDLF*MGLTYS
Trigger: TGAATATGTGAGACCCATCAAGAACAAATCTGTGAT...CATCTTGGTACCAGTTATCACTGCCACAGAAAAAGGAACCCAAGCAAGATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TGGCTTATCACTATTTATATCACCTATAAACATTGTAGAGGATCCTGCAGTTTCCAGGCTTCCTACTTATaGCCAAAGGCTTCTGATTTG +
Preference number: 5 (lower is better)
Translates to: WLITIYITYKHCRGSCSFQASYL*PKASDL
Trigger: CAAATCAGAAGCCTTTGGCAATAAGTAGGAAGCCTG...GAAACTGCAGGATCCTCTACAATGTTTATAGGTGATATAAATAGTGATAAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CAA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGCTGTGTTTCTGTTGTTaGCATAAACCAAGTACAGAG +
Preference number: 5 (lower is better)
Translates to: IVQKKCASVSHTDLSQSELCFCC*HKPSTE
Trigger: CTCTGTACTTGGTTTATGCAAACAACAGAAACACAG...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CCTAAATATTTGGAAACTAAACAACACATCTCTAGGCAGGGTCTTGCCATGTTGATTTGGAAAAATAGTTaGCCATTTGTCCACTGTTGC +
Preference number: 5 (lower is better)
Translates to: PKYLETKQHISRQGLAMLIWKNS*PFVHCC
Trigger: GCAACAGTGGACAAATGGCAAACTATTTTTCCAAAT...CAACATGGCAAGACCCTGCCTAGAGATGTGTTGTTTAGTTTCCAAATATTTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS-3UTR CAA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: GICFITFYHYSCILHKSNMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFMIAPL*VLTVKN
Trigger: ATTCTTCACAGTCAACACCAACAGAGGAGCTATCAT...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp CCTGCAAGTACTGAATTAAATCATGGCTTCAAAAGGTTTCAAGTCAGTACCTATCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: PASTELNHGFKRFQVSTYLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...ATAGGTACTGACTTGAAACCTTTTGAAGCCATGATTTAATTCAGTACTTGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674942.1
CDS-3UTR CAA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTACCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: HYSCILHKSNKDTLTHILPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCCCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: EGICFITFYHYSCILHKSPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGCCCTTGCTGAGTATTTaGTTCTTGCATTCGATTCAC +
Preference number: 5 (lower is better)
Translates to: SLLDSYGPRLITSFITSLPLLSI*FLHSIH
Trigger: GTGAATCGAATGCAAGAACAAAATACTCAGCAAGGG...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GTATCCACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTATTCGCTTTTGAGATTTaGGTTATGAACTGTACAGCT +
Preference number: 5 (lower is better)
Translates to: VSTCFTTAHGSGYHHKSLFAFEI*VMNCTA
Trigger: AGCTGTACAGTTCATAACCAAAATCTCAAAAGCGAA...TAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGTGGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp TCTCTCTGTAGGTTACAAAATGAACATTTTTCATCCATAGACCAGTCAGTCAGCCCTGACTTACGAAACTaGTACTATATGAAATTGGTC +
Preference number: 5 (lower is better)
Translates to: SLCRLQNEHFSSIDQSVSPDLRN*YYMKLV
Trigger: GACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG...GCTGACTGACTGGTCTATGGATGAAAAATGTTCATTTTGTAACCTACAGAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675131.1
CDS-3UTR CAA 90 bp CCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTTCTTGTCTTTTGAAATaGACACTTGGCCTGACTTAC +
Preference number: 5 (lower is better)
Translates to: PVLQLLMGQVIITNLYNTSCLLK*TLGLTY
Trigger: GTAAGTCAGGCCAAGTGTCAATTTCAAAAGACAAGA...AGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCAAGAAGAAGTTACCCTaGTCAAAATCAGAACAAACC +
Preference number: 5 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPKKKLP*SKSEQT
Trigger: GGTTTGTTCTGATTTTGACAAGGGTAACTTCTTCTT...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTCAAAGAAATCTCTTTaGGACAGTTATGGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYSKKSL*DSYGPR
Trigger: ACGAGGACCATAACTGTCCAAAAGAGATTTCTTTGA...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTACATCATCAAGAGCATTaGACTTCTTACGGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: TIRNTNNPTHEPTMILILHHQEH*TSYGVF
Trigger: AAACACGCCGTAAGAAGTCAAATGCTCTTGATGATG...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACCATCATCAAGAGCATTaGACTTCTTACGGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNHHQEH*TSYGVF
Trigger: AAACACGCCGTAAGAAGTCAAATGCTCTTGATGATG...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GGAGATACATGTGTTGAAAGGATTGTTGTGTTGAAGACAAAGGATTTAGTTAGCGAGTCTCCACAGACTTaGTGCTATAGCAATAATAGA +
Preference number: 5 (lower is better)
Translates to: GDTCVERIVVLKTKDLVSESPQT*CYSNNR
Trigger: TCTATTATTGCTATAGCACAAAGTCTGTGGAGACTC...GCTAACTAAATCCTTTGTCTTCAACACAACAATCCTTTCAACACATGTATCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATCAAATTAGTCCCATATaGTTGGATGTTTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNQISPI*LDVFLG
Trigger: CCCCAAGAAAACATCCAACAATATGGGACTAATTTG...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTATTTCATGATCATATaGCCGATAGCGGCCACGTTT +
Preference number: 5 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGYFMII*PIAATF
Trigger: AAACGTGGCCGCTATCGGCAATATGATCATGAAATA...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GGTTCAACTGAATGGCTGGAATGGTCTTTCACCAATAAAAATGTTTCACTTGACGCACTTGAGTGCATTTaGTATTTCATAGAATGCACT +
Preference number: 5 (lower is better)
Translates to: GSTEWLEWSFTNKNVSLDALECI*YFIECT
Trigger: AGTGCATTCTATGAAATACAAAATGCACTCAAGTGC...GTCAAGTGAAACATTTTTATTGGTGAAAGACCATTCCAGCCATTCAGTTGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTCCTGGTGGATGCACTaGAGTGCATTTTGTATTTCA +
Preference number: 5 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGSWWMH*SAFCIS
Trigger: TGAAATACAAAATGCACTCAAGTGCATCCACCAGGA...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCTCCTGGTGGATGCACTaGAGTGCATTTTGTATTTCA +
Preference number: 5 (lower is better)
Translates to: EGICFITFYHYSCILHKSSWWMH*SAFCIS
Trigger: TGAAATACAAAATGCACTCAAGTGCATCCACCAGGA...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTACTTTACCTTTAACTTaGCTTTCCATTGGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGTLPLT*LSIGGR
Trigger: CCTTCCCCCAATGGAAAGCAAAGTTAAAGGTAAAGT...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACACTTTACCTTTAACTTaGCTTTCCATTGGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GICFITFYHYSCILHKSNTLPLT*LSIGGR
Trigger: CCTTCCCCCAATGGAAAGCAAAGTTAAAGGTAAAGT...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCACTTTACCTTTAACTTaGCTTTCCATTGGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: EGICFITFYHYSCILHKSTLPLT*LSIGGR
Trigger: CCTTCCCCCAATGGAAAGCAAAGTTAAAGGTAAAGT...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTCAACATAGCCAAAACTaGTTGCTGGTGATGTATGCA +
Preference number: 5 (lower is better)
Translates to: LGRCQHKCIINHEAARYIQHSQN*LLVMYA
Trigger: TGCATACATCACCAGCAACAAGTTTTGGCTATGTTG...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTCAACATAGCCAAAACTaGTTGCTGGTGATGTATGCA +
Preference number: 5 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLQHSQN*LLVMYA
Trigger: TGCATACATCACCAGCAACAAGTTTTGGCTATGTTG...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCTATAATCACTGGCTTTaGCATTATGCAAGAGAGATG +
Preference number: 5 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPYNHWL*HYAREM
Trigger: CATCTCTCTTGCATAATGCAAAAGCCAGTGATTATA...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTCAGAGGAGTTGCGCATaGCAAATAAAGTTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFQRSCA*QIKFLD
Trigger: GTCAAGAAACTTTATTTGCAATGCGCAACTCCTCTG...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACCATTTGAGTGCACTGTaGGTCATACTTTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNHLSAL*VILFFR
Trigger: CCTGAAGAAAAGTATGACCAACAGTGCACTCAAATG...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCCTTGCACCCAAGCATTaGTTATTTGCTCAAATCTAT +
Preference number: 5 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPLAPKH*LFAQIY
Trigger: ATAGATTTGAGCAAATAACAAATGCTTGGGTGCAAG...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATAGTCCAGAAAAAGTGTGCATCAGTCAGTCACACAGATTTATCACAATCTGAGCTGTGTTCAAGACAGTaGAGCTTCCTCAAAAATATT +
Preference number: 5 (lower is better)
Translates to: IVQKKCASVSHTDLSQSELCSRQ*SFLKNI
Trigger: AATATTTTTGAGGAAGCTCAACTGTCTTGAACACAG...CTCAGATTGTGATAAATCTGTGTGACTGACTGATGCACACTTTTTCTGGACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp CCTGACTTACGAAACTTGTACTATATGAAATTGGTCCTCTTTTCTGCAATACCCCTGTGTTCAAGACAGTaGAGCTTCCTCAAAAATATT +
Preference number: 5 (lower is better)
Translates to: PDLRNLYYMKLVLFSAIPLCSRQ*SFLKNI
Trigger: AATATTTTTGAGGAAGCTCAACTGTCTTGAACACAG...GGGTATTGCAGAAAAGAGGACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: EGICFITFYHYSCILHKSLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACCTGAGTATTTTGTTCTaGCATTCGATTCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNLSILF*HSIHSE
Trigger: CTCACTGTGAATCGAATGCAAGAACAAAATACTCAG...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYFSFTN*LRGSWY
Trigger: ATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAA...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp CCCTTAATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTATGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 5 (lower is better)
Translates to: PLIFMSLHRLCAIAIIEVWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...TACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAATTAAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp AGTCACACAGATTTATCACAATCTGAGGTGGGCCTAGGAATCTCATTTTTAAATCCTGACTTACGAAACTaGTACTATATGAAATTGGTC +
Preference number: 5 (lower is better)
Translates to: SHTDLSQSEVGLGISFLNPDLRN*YYMKLV
Trigger: GACCAATTTCATATAGTACAAGTTTCGTAAGTCAGG...ATTTAAAAATGAGATTCCTAGGCCCACCTCAGATTGTGATAAATCTGTGTGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTTCTTGTCTTTTGAAATaGACACTTGGCCTGACTTAC +
Preference number: 5 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLSCLLK*TLGLTY
Trigger: GTAAGTCAGGCCAAGTGTCAATTTCAAAAGACAAGA...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTTCAAAGAAATCTCTTTaGGACAGTTATGGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: LGRCQHKCIINHEAARYISKKSL*DSYGPR
Trigger: ACGAGGACCATAACTGTCCAAAAGAGATTTCTTTGA...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACGAGTCTCCACAGACTTaGTGCTATAGCAATAATAGA +
Preference number: 5 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNESPQT*CYSNNR
Trigger: TCTATTATTGCTATAGCACAAAGTCTGTGGAGACTC...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCATCACAAGCCAAACTTaGTCTTACTCCTTAACCTTG +
Preference number: 5 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSITSQT*SYSLTL
Trigger: CAAGGTTAAGGAGTAAGACAAAGTTTGGCTTGTGAT...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATCAAATTAGTCCCATATaGTTGGATGTTTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHQISPI*LDVFLG
Trigger: CCCCAAGAAAACATCCAACAATATGGGACTAATTTG...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp GAAGGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCTGTCTTTCAAAGCTTTaGAGAGCAAACCATCTGCAA +
Preference number: 5 (lower is better)
Translates to: EGICFITFYHYSCILHKSCLSKL*RANHLQ
Trigger: TTGCAGATGGTTTGCTCTCAAAAGCTTTGAAAGACA...GGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTATGTCTTTCAAAGCTTTaGAGAGCAAACCATCTGCAA +
Preference number: 5 (lower is better)
Translates to: HYSCILHKSNKDTLTHILCLSKL*RANHLQ
Trigger: TTGCAGATGGTTTGCTCTCAAAAGCTTTGAAAGACA...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CAAAATCAAGGCAGCCACAGAGTTTTACTAAATTACTGCGACATTGGAAATACTACTTTGATTGGTTGCTaGACATACATACAACAAGTG +
Preference number: 5 (lower is better)
Translates to: QNQGSHRVLLNYCDIGNTTLIGC*TYIQQV
Trigger: CACTTGTTGTATGTATGTCAAGCAACCAATCAAAGT...AGTATTTCCAATGTCGCAGTAATTTAGTAAAACTCTGTGGCTGCCTTGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACCAAATAACTGCTTGGTaGTGTAGTTTCTCACTCTTC +
Preference number: 5 (lower is better)
Translates to: GICFITFYHYSCILHKSNQITAW*CSFSLF
Trigger: GAAGAGTGAGAAACTACACAACCAAGCAGTTATTTG...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp CATCTCCACTTACTTGCACCCAAGCATTTGTTATTTGCTCAAATCTATTGTTTATCACTGGATCGTTTTTaGTTGTGGATTCGGATACTT +
Preference number: 5 (lower is better)
Translates to: HLHLLAPKHLLFAQIYCLSLDRF*LWIRIL
Trigger: AAGTATCCGAATCCACAACAAAAAACGATCCAGTGA...TAAACAATAGATTTGAGCAAATAACAAATGCTTGGGTGCAAGTAAGTGGAGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637787.1
CDS-3UTR CAA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTATGCTACCACAGATTTaGATAAGCTCTGTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLMLPQI*ISSVLC
Trigger: GCAAAGAACAGAGCTTATCAAAATCTGTGGTAGCAT...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ACCTGTTTTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACCCTTATTTTATCCATTaGAGTGCACTGTTGGTCATA +
Preference number: 5 (lower is better)
Translates to: TCFTTAHGSGYHHKSLQYPYFIH*SALLVI
Trigger: TATGACCAACAGTGCACTCAAATGGATAAAATAAGG...GTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAAAACAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTTCATCTCCACTTACTaGCACCCAAGCATTTGTTAT +
Preference number: 5 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHFISTY*HPSICY
Trigger: ATAACAAATGCTTGGGTGCAAGTAAGTGGAGATGAA...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATTTTCATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATAAAATAGTTTGCCATTaGTCCACTGTTGCAAGACTG +
Preference number: 5 (lower is better)
Translates to: IFMSLHRLCAIAIIEVLHKIVCH*STVARL
Trigger: CAGTCTTGCAACAGTGGACAAATGGCAAACTATTTT...ATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCATGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TTACAACTGCTCATGGGTCAGGTTATCATCACAAATCTTTACAATACTAGCTTTTTCGCTTTTGAGATTTaGGTTATGAACTGTACAGCT +
Preference number: 5 (lower is better)
Translates to: LQLLMGQVIITNLYNTSFFAFEI*VMNCTA
Trigger: AGCTGTACAGTTCATAACCAAAATCTCAAAAGCGAA...AAAGCTAGTATTGTAAAGATTTGTGATGATAACCTGACCCATGAGCAGTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
ENST00000675605.1
CDS-3UTR CAA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTTTTTCTTTCACCAATTaGCTTCGAGGTAGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: LGRCQHKCIINHEAARYIFSFTN*LRGSWY
Trigger: ATACCAACTACCTCGAAGCAAATTGGTGAAAGAAAA...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACTGGGAAACATGCTACTaGACAAAAAGCTATGATCAA +
Preference number: 5 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNWETCY*TKSYDQ
Trigger: TTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCA...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp TCTCTTTTGGACAGTTATGGTCCTCGTTTAATTACAAGCTTCATTACAAGTTTGAAGAAGAAGTTACCCTaGTCAAAATCAGAACAAACC +
Preference number: 5 (lower is better)
Translates to: SLLDSYGPRLITSFITSLKKKLP*SKSEQT
Trigger: GGTTTGTTCTGATTTTGACAAGGGTAACTTCTTCTT...CAAACTTGTAATGAAGCTTGTAATTAAACGAGGACCATAACTGTCCAAAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000637787.1
ENST00000675131.1
ENST00000675143.1
CDS-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACATTAGTCCCATATTGTaGGATGTTTTCTTGGGGATA +
Preference number: 5 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNISPIL*DVFLGI
Trigger: TATCCCCAAGAAAACATCCAACAATATGGGACTAAT...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326877.8
ENST00000635767.1
ENST00000675131.1
CDS-3UTR CAA 90 bp CACTACAGTTGCATACTCCATAAATCCAACAAGGATACTTTGACCCATATTTTACAACGCTTTATGCTATaGACTACTAAAGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: HYSCILHKSNKDTLTHILQRFML*TTKENL
Trigger: CAGGTTTTCTTTAGTAGTCAATAGCATAAAGCGTTG...TAAAATATGGGTCAAAGTATCCTTGTTGGATTTATGGAGTATGCAACTGTAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTTAACCAACGCTTTATGCTATaGACTACTAAAGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: FLVLHLIILKGSIAAGVNQRFML*TTKENL
Trigger: CAGGTTTTCTTTAGTAGTCAATAGCATAAAGCGTTG...GTTAACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp GGCATATGCTTTATAACATTTTACCACTACAGTTGCATACTCCATAAATCCAACCAACGCTTTATGCTATaGACTACTAAAGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: GICFITFYHYSCILHKSNQRFML*TTKENL
Trigger: CAGGTTTTCTTTAGTAGTCAATAGCATAAAGCGTTG...GTTGGATTTATGGAGTATGCAACTGTAGTGGTAAAATGTTATAAAGCATATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TTTGTTCTTAGTACTCCATCTTATTATATTAAAGGGTTCTATAGCTGCTGGGGTACTTTGATTGGTTGCTaGACATACATACAACAAGTG +
Preference number: 5 (lower is better)
Translates to: FVLSTPSYYIKGFYSCWGTLIGC*TYIQQV
Trigger: CACTTGTTGTATGTATGTCAAGCAACCAATCAAAGT...ACCCCAGCAGCTATAGAACCCTTTAATATAATAAGATGGAGTACTAAGAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382224.5
ENST00000382226.5
ENST00000676061.1
CDS-3UTR CAA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCATTTCTGTCAGCATGTaGGTCTTTACCATCAATTTC +
Preference number: 5 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSISVSM*VFTINF
Trigger: GAAATTGATGGTAAAGACCAACATGCTGACAGAAAT...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ACATTTTCCTGTGAATGGGAAACATGCTACTTGACAAAAAGCTATGATCAACTTATTTCTGTCAGCATGTaGGTCTTTACCATCAATTTC +
Preference number: 5 (lower is better)
Translates to: TFSCEWETCYLTKSYDQLISVSM*VFTINF
Trigger: GAAATTGATGGTAAAGACCAACATGCTGACAGAAAT...AAGTTGATCATAGCTTTTTGTCAAGTAGCATGTTTCCCATTCACAGGAAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TGGGAATATAATGTGACAGGAACTTCTCTTTATATACGCTACCAATTTATGAGCCAGTACCTTCATATTTaGCTGGTACATTTTCAACAC +
Preference number: 5 (lower is better)
Translates to: WEYNVTGTSLYIRYQFMSQYLHI*LVHFQH
Trigger: GTGTTGAAAATGTACCAGCAAAATATGAAGGTACTG...GCTCATAAATTGGTAGCGTATATAAAGAGAAGTTCCTGTCACATTATATTCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ACTATAAGGAACACTAATAATCCCACCCATGAGCCAACCATGATTTTGATTTTAGTCCTTAGGTTCTTCTaGTGGCTTATCACTATTTAT +
Preference number: 5 (lower is better)
Translates to: TIRNTNNPTHEPTMILILVLRFF*WLITIY
Trigger: ATAAATAGTGATAAGCCACAAGAAGAACCTAAGGAC...TAAAATCAAAATCATGGTTGGCTCATGGGTGGGATTATTAGTGTTCCTTATAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635767.1
CDS-3UTR CAA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTATCACAGATTTGTTCTaGATGGGTCTCACATATTCA +
Preference number: 5 (lower is better)
Translates to: LGRCQHKCIINHEAARYIITDLF*MGLTYS
Trigger: TGAATATGTGAGACCCATCAAGAACAAATCTGTGAT...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTCTTTTTGGCTGCAATTaGTTCCATTCTCTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LGRCQHKCIINHEAARYILFGCN*FHSLLL
Trigger: AAGCAAAAGAGAATGGAACAAATTGCAGCCAAAAAG...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp TTAGGGAGGTGTCAACATAAATGTATTATTAACCATGAAGCTGCTCGCTATATTATTTGGAAAAATAGTTaGCCATTTGTCCACTGTTGC +
Preference number: 5 (lower is better)
Translates to: LGRCQHKCIINHEAARYIIWKNS*PFVHCC
Trigger: GCAACAGTGGACAAATGGCAAACTATTTTTCCAAAT...AATATAGCGAGCAGCTTCATGGTTAATAATACATTTATGTTGACACCTCCCTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS-3UTR CAA 90 bp ATGAGTCTCCACAGACTTTGTGCTATAGCAATAATAGAGGTACTTCATTATAACATTTGGAAAAATAGTTaGCCATTTGTCCACTGTTGC +
Preference number: 5 (lower is better)
Translates to: MSLHRLCAIAIIEVLHYNIWKNS*PFVHCC
Trigger: GCAACAGTGGACAAATGGCAAACTATTTTTCCAAAT...GTTATAATGAAGTACCTCTATTATTGCTATAGCACAAAGTCTGTGGAGACTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635767.1
ENST00000637787.1
CDS CAA 90 bp GCGGCGGCAGCAGCGGCGGCGGCAGCGGCCATTCTCTCTCTTCCCTaGTCCATCTGCGTCCCGCGTCACGCGCCCTCATTTACATACGAG +
Preference number: 6 (lower is better)
Translates to: AAAAAAAAAAILSLP*SICVPRHAPSFTYE
Trigger: CTCGTATGTAAATGAGGGCGCGTGACGCGGGACGCAGATGGACAAGGGAAGAGAGAGAATGGCCGCTGCCGCCGCCGCTGCTGCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000382226.5
ENST00000635767.1
ENST00000675131.1
CDS GCA 72 bp GCGGCAGCGGCCATTCTCTCTCTTCCCTTGTCCATCTaGGTCCCGCGTCACGCGCCCTCATTTACATACGAG +
Preference number: 6 (lower is better)
Translates to: AAAAILSLPLSI*VPRHAPSFTYE
Trigger: CTCGTATGTAAATGAGGGCGCGTGACGCGGGACGCAGATGGACAAGGGAAGAGAGAGAATGGCCGCTGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326877.8
ENST00000382226.5
ENST00000635767.1
ENST00000675131.1
CDS CCA 72 bp GTACTGCGCCCAGCCAACATGTCTCTAAATAATCCATaGGCTCAGATAGAGAAAGCAGGTCTGGAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VLRPANMSLNNP*AQIEKAGLEAS
Trigger: GCTGGCCTCCAGACCTGCTTTCTCTATCTGAGCCCATGGATTATTTAGAGACATGTTGGCTGGGCGCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675927.1
CDS CCA 72 bp GTACTGCGCCCAGCCAACATGTCTCTAAATAATCCATaGGCTCAGATAGAGAAAGCAGGTCTGGAGGCTAGG +
Preference number: 6 (lower is better)
Translates to: VLRPANMSLNNP*AQIEKAGLEAR
Trigger: CCTAGCCTCCAGACCTGCTTTCTCTATCTGAGCCCATGGATTATTTAGAGACATGTTGGCTGGGCGCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS CAA 72 bp CCAAGAACACTCACCCAACCATTGGTAGGAGACCTCTaGGAGACCCAGATGCTTGAATCAGCTTTCTTTCGA +
Preference number: 6 (lower is better)
Translates to: PRTLTQPLVGDL*ETQMLESAFFR
Trigger: TCGAAAGAAAGCTGATTCAAGCATCTGGGTCTCCAAGAGGTCTCCTACCAATGGTTGGGTGAGTGTTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512376.2
CDS CAA 90 bp AGGATCACAGTTCTGAGGAAGATCCAACCATTGGTAGGAGACCTCTaGGAGACCCAGATGCTTGAATCAGCTTTCTTTCGAAAGAGTGCA +
Preference number: 6 (lower is better)
Translates to: RITVLRKIQPLVGDL*ETQMLESAFFRKSA
Trigger: TGCACTCTTTCGAAAGAAAGCTGATTCAAGCATCTGGGTCTCCAAGAGGTCTCCTACCAATGGTTGGATCTTCCTCAGAACTGTGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS CAA 72 bp GTTCTGAGGAAGATCCAACCATTGGTAGGAGACCTCTaGGAGACCCAGATGCTTGAATCAGCTTTCTTTCGA +
Preference number: 6 (lower is better)
Translates to: VLRKIQPLVGDL*ETQMLESAFFR
Trigger: TCGAAAGAAAGCTGATTCAAGCATCTGGGTCTCCAAGAGGTCTCCTACCAATGGTTGGATCTTCCTCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676061.1
CDS CAA 90 bp CAATCTTATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGTaGGTGTTGACTGTGAAGAATCAAGAGATGGTATACAATCCTTCA +
Preference number: 6 (lower is better)
Translates to: QSYQCWTGPEMIAPL*VLTVKNQEMVYNPS
Trigger: TGAAGGATTGTATACCATCTCTTGATTCTTCACAGTCAACACCAACAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATAAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510451.5
ENST00000637787.1
CDS CAA 72 bp AAGCAGGTCTGGAGGCTAGGGATTTGGAAAAATAGTTaGCCATTTGTCCACTGTTGCAAGACTGTCGTTTAT +
Preference number: 6 (lower is better)
Translates to: KQVWRLGIWKNS*PFVHCCKTVVY
Trigger: ATAAACGACAGTCTTGCAACAGTGGACAAATGGCAAACTATTTTTCCAAATCCCTAGCCTCCAGACCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676180.1
CDS CAA 90 bp TATCAGTGTTGGACTGGCCCTGAGATGATAGCTCCTCTGTTGGTGTaGACTGTGAAGAATCAAGAGATGGTATACAATCCTTCAAATAAA +
Preference number: 6 (lower is better)
Translates to: YQCWTGPEMIAPLLV*TVKNQEMVYNPSNK
Trigger: TTTATTTGAAGGATTGTATACCATCTCTTGATTCTTCACAGTCAACACCAACAGAGGAGCTATCATCTCAGGGCCAGTCCAACACTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510451.5
ENST00000637787.1